HHsearch alignment for GI: 255764501 and conserved domain: PRK09500
>PRK09500 potC spermidine/putrescine ABC transporter membrane protein; Reviewed.
Probab=100.00 E-value=0 Score=266.76 Aligned_cols=219 Identities=16% Similarity=0.283 Sum_probs=201.2
Q ss_pred HCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 41688679999956989999999999999999999999999999999707996179999999999988999999999999
Q gi|255764501|r 35 WRHMPLISWREFMEDSYLWHVIGFTFWQALLSTLLSVIPSIFLAKSLFRRHFPGRILFLRLHTMIFVLPVFVVIMGVFTV 114 (535)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~nTl~~a~~s~~~~~~ig~~~A~~~~~~~~~~~~~~~~~~~lp~~~P~~v~~~~~~~~ 114 (535)
T Consensus 39 ~~~fTl~~y~~~f~~~~~~~~~~nSl~ia~~~~~~~~~lg~~~A~~l~r~~~~~~~~~~~l~~~p~~~P~~v~~i~l~~~ 118 (257)
T PRK09500 39 WQGFTTKWYELLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVL 118 (257)
T ss_pred CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88968999999987937999999999999999999999999999999752677456999999999997999999999999
Q ss_pred HHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCC
Q ss_conf 72278542103315888764333269999999998766548999999850888999999862147146775442001664
Q gi|255764501|r 115 YGRTGWIAQLCQWLGIVYQFNLYGIKGILLVHVFFNMPLAIRMLLQALDSISIEQRQLALQLGMNPWYFFRFVEWPYLRR 194 (535)
Q Consensus 115 ~~~~G~~~~~l~~~g~~~~~~~~~~~~iii~~~~~~~p~~~l~~~~~l~~i~~~~~eaA~~lGas~~~~f~~v~lP~~~p 194 (535)
T Consensus 119 ~~~~g~~---------------~~~~~lil~~~~~~lP~~~~~i~~~l~~i~~~l~EAA~~lGAs~~~~f~~VilPl~~P 183 (257)
T PRK09500 119 FMLLGIQ---------------LGFWSLLFAHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEVTILRKIILPLAMP 183 (257)
T ss_pred HHHCCHH---------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 9973513---------------2099999888885150279999999971796999999872999879636312984799
Q ss_pred CHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 0245777877765258415664036655441145556777653200000013455788999998530134332211
Q gi|255764501|r 195 QILPTSSLIFMLCFASFATVLTLGGGPASTTIELAIYQSLSYDFDLNKAAFLSLVQIFCCLSLVLFNQKFNVSFSS 270 (535)
Q Consensus 195 ~i~~~~~l~f~~~~~~f~~~~~lgg~~~~~tl~~~iy~~~~~~~~~~~aa~la~il~~~~~~~~~~~~~~~~~~~~ 270 (535)
T Consensus 184 ~i~~~~il~F~~s~~ef~~~~~l~g~-~~~tlp~~i~~~~~~~-~~~~~~Ala~il~~i~~~~~~l~~~l~r~~~k 257 (257)
T PRK09500 184 AVAAGWLLSFTLSMDDVVVSSFVTGP-SYEILPLKIYSMVKVG-VSPEVNALATILLVLSLVLVILSQLLARDKTK 257 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCC-CCEEHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999975289-9602899999998737-87599999999999999999999998665479