HHsearch alignment for GI: 255764501 and conserved domain: PRK09500
>PRK09500 potC spermidine/putrescine ABC transporter membrane protein; Reviewed.
Probab=100.00 E-value=0 Score=267.26 Aligned_cols=242 Identities=15% Similarity=0.207 Sum_probs=217.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCC------------CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5469999999999997412322100011------------0013467643835479999999999997656652111122
Q gi|255764501|r 287 SRWWDFFLISCAIWFFILPLLAIIIEGM------------NAKLLLRLLQQSGLWSSFFNSIYIAINAGVLCMIFTIMLL 354 (535)
Q Consensus 287 ~~~~~~~~~~~~~l~~i~pl~~ii~~~~------------~~~~~~~~~~~~~~~~a~~~Sl~~s~~~~~i~~~l~l~~a 354 (535)
T Consensus 3 ~r~l~~~~~~lv~~f~~~Pl~~iv~~SF~~~~~~~~~~~fTl~~y~~~f~~~~~~~~~~nSl~ia~~~~~~~~~lg~~~A 82 (257)
T PRK09500 3 GRLLRGGFMTLVYAYLYIPIIILIVNSFNSSRFGINWQGFTTKWYELLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTA 82 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 44999999999999999989999999938998788988968999999987937999999999999999999999999999
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHCCH
Q ss_conf 10002211565126799999997465532376676643012346775665534431024652121569999998972897
Q gi|255764501|r 355 WTKRELRLRRLKFFNHIFELSELLILAVPSIVLAVGFFLLLKNTVNLTSSSYSLIIVTNALMAVPYAVKILENPMYDLAE 434 (535)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~lp~~iP~iv~~~~~~~~~~~~~~~~~~~~~~iila~~~~~lP~~~~~l~~~l~~i~~ 434 (535)
T Consensus 83 ~~l~r~~~----~~~~~~~~l~~~p~~~P~~v~~i~l~~~~~~~g--~~~~~~~lil~~~~~~lP~~~~~i~~~l~~i~~ 156 (257)
T PRK09500 83 VALYRYRF----RGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLG--IQLGFWSLLFAHITFCLPFVVVTVYSRLKGFDV 156 (257)
T ss_pred HHHHHCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCH
T ss_conf 99975267----745699999999999799999999999999735--132099999888885150279999999971796
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 78999997397876999999999546899999999999985110116786489830289899988617981369999999
Q gi|255764501|r 435 RYNALCISLQIKGINRLYLIEFKALKRLMAQTFSFSCLLSIGDFGIIALFGNDNFCTLPCYLYQQLGSYRQSDAVVTALL 514 (535)
Q Consensus 435 ~l~eaA~~lGa~~~~~f~~I~lPll~p~i~~~~~l~f~~s~~e~~~~~ll~~~~~~Tl~~~i~~~~~~~~~~~a~a~a~i 514 (535)
T Consensus 157 ~l~EAA~~lGAs~~~~f~~VilPl~~P~i~~~~il~F~~s~~ef~~~~~l~g~~~~tlp~~i~~~~~~~~~~~~~Ala~i 236 (257)
T PRK09500 157 RMLEAAKDLGASEVTILRKIILPLAMPAVAAGWLLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATI 236 (257)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 99999987299987963631298479999999999999999999999975289960289999999873787599999999
Q ss_pred HHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999999714668
Q gi|255764501|r 515 LLSLCLGLFSLLEYLSGKEY 534 (535)
Q Consensus 515 l~~i~~~~~~l~~~l~~r~~ 534 (535)
T Consensus 237 l~~i~~~~~~l~~~l~r~~~ 256 (257)
T PRK09500 237 LLVLSLVLVILSQLLARDKT 256 (257)
T ss_pred HHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999866547