HHsearch alignment for GI: 255764501 and conserved domain: PRK10417
>PRK10417 nikC nickel transporter permease NikC; Provisional.
Probab=99.55 E-value=2.1e-12 Score=82.68 Aligned_cols=162 Identities=14% Similarity=0.064 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
Q ss_conf 99999999999999999999999999999997079961799999999999889999999999997227854210331588
Q gi|255764501|r 51 YLWHVIGFTFWQALLSTLLSVIPSIFLAKSLFRRHFPGRILFLRLHTMIFVLPVFVVIMGVFTVYGRTGWIAQLCQWLGI 130 (535)
Q Consensus 51 ~~~~~l~nTl~~a~~s~~~~~~ig~~~A~~~~~~~~~~~~~~~~~~~lp~~~P~~v~~~~~~~~~~~~G~~~~~l~~~g~ 130 (535)
T Consensus 61 rll~G~r~sl~i~l~~~~~~~~iG~~lG~~ag~~gg~~d~~~~~~~d~~~~iP~lll~i~l~~~~g~------------- 127 (272)
T PRK10417 61 RLMAGTRVSLGSVMACLLLVLALGLVIGGSAGLLGGRVDQATMRVADMFMTFPTSILSFFMVGVLGT------------- 127 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCC-------------
T ss_conf 9999999999999999999999999999999971876124777778898628628778888864489-------------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
Q ss_conf 87643332699999999987665489999998-50888999999862147146775442001664024577787776525
Q gi|255764501|r 131 VYQFNLYGIKGILLVHVFFNMPLAIRMLLQAL-DSISIEQRQLALQLGMNPWYFFRFVEWPYLRRQILPTSSLIFMLCFA 209 (535)
Q Consensus 131 ~~~~~~~~~~~iii~~~~~~~p~~~l~~~~~l-~~i~~~~~eaA~~lGas~~~~f~~v~lP~~~p~i~~~~~l~f~~~~~ 209 (535)
T Consensus 128 -------~~~~~il~l~l~~w~~~ar~iR~~~l~~~~~~yV~AAr~~G~s~~~I~~rhilPni~~~i~v~~~~~~~~~Il 200 (272)
T PRK10417 128 -------GLTNVIIAIALSHWAWYARMVRSLVISLRQREFVLASRLSGAGHVRVFVDHLLGAVIPSLLVLATLDIGHMML 200 (272)
T ss_pred -------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_conf -------7258999999988999999999999999989999999983958778322017676378999999999999999
Q ss_pred CCHHHHHHCCC--CCCCCHHHHHHH
Q ss_conf 84156640366--554411455567
Q gi|255764501|r 210 SFATVLTLGGG--PASTTIELAIYQ 232 (535)
Q Consensus 210 ~f~~~~~lgg~--~~~~tl~~~iy~ 232 (535)
T Consensus 201 ~~a~LsFLGlG~~pp~~~WG~ml~~ 225 (272)
T PRK10417 201 HVAGLSFLGLGVTAPTAEWGVMIND 225 (272)
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 9999999047899999889999999