HHsearch alignment for GI: 255764501 and conserved domain: PRK10561
>PRK10561 glycerol-3-phosphate transporter permease; Provisional.
Probab=100.00 E-value=0 Score=269.71 Aligned_cols=232 Identities=18% Similarity=0.229 Sum_probs=207.6
Q ss_pred CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 88679999956989999999999999999999999999999999707996179999999999988999999999999722
Q gi|255764501|r 38 MPLISWREFMEDSYLWHVIGFTFWQALLSTLLSVIPSIFLAKSLFRRHFPGRILFLRLHTMIFVLPVFVVIMGVFTVYGR 117 (535)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~l~nTl~~a~~s~~~~~~ig~~~A~~~~~~~~~~~~~~~~~~~lp~~~P~~v~~~~~~~~~~~ 117 (535)
T Consensus 39 vGl~Ny~~l~~d~~f~~~~~ntl~~~~~~~~~~~~l~l~lA~ll~~-~~~~~~~~r~~~~lP~~i~~vv~~~~w~~l~~~ 117 (280)
T PRK10561 39 VGLDNFVALFHDSYYLDSFWTTIKFSALVTVSGLLVSLFFAALVDY-VVRGSRFYQTLMLLPYAVAPAVAAVLWIFLFNP 117 (280)
T ss_pred EHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
T ss_conf 4599999998797799999999999999999999999999999861-020789999999987553199999999999698
Q ss_pred C-CCCCCHHHHCCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC
Q ss_conf 7-854210331588876433---326999999999876654899999985088899999986214714677544200166
Q gi|255764501|r 118 T-GWIAQLCQWLGIVYQFNL---YGIKGILLVHVFFNMPLAIRMLLQALDSISIEQRQLALQLGMNPWYFFRFVEWPYLR 193 (535)
Q Consensus 118 ~-G~~~~~l~~~g~~~~~~~---~~~~~iii~~~~~~~p~~~l~~~~~l~~i~~~~~eaA~~lGas~~~~f~~v~lP~~~ 193 (535)
T Consensus 118 ~~G~~n~~l~~~g~~~~~~~~~~~a~~~vi~~~vW~~~g~~~li~lagL~~Ip~~l~EAA~iDGA~~~q~f~~ItlPll~ 197 (280)
T PRK10561 118 GRGLITHFLAEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFYAALQSIPRSLVEAAAIDGAGPIRRFFKLALPLIA 197 (280)
T ss_pred CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHEEEEEEHHHHH
T ss_conf 71089999986577775446748999999999999998999999999985799779999997699775233123046105
Q ss_pred CCHHHHHHHHHHHH-HCCCHHHHHH-CCCCCCC--CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 40245777877765-2584156640-3665544--114555677765320000001345578899999853013433221
Q gi|255764501|r 194 RQILPTSSLIFMLC-FASFATVLTL-GGGPAST--TIELAIYQSLSYDFDLNKAAFLSLVQIFCCLSLVLFNQKFNVSFS 269 (535)
Q Consensus 194 p~i~~~~~l~f~~~-~~~f~~~~~l-gg~~~~~--tl~~~iy~~~~~~~~~~~aa~la~il~~~~~~~~~~~~~~~~~~~ 269 (535)
T Consensus 198 p~~~~~~i~~~i~~~~~~f~~i~~~t~GGP~~~t~~l~~~iy~~~f~~~~~g~asA~svil~~i~~~~~~i~~r~~~rkv 277 (280)
T PRK10561 198 PVSFFLLVVNLVYAFFDTFPVIDAATSGGPVQATTTLIYKIYREGFTGLDLSSSAAQSVVLMFLVIVLTVVQFRYVESKV 277 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
T ss_conf 99999999999999996568886436888852889999999999987599619999999999999999999999983211
Q ss_pred C
Q ss_conf 1
Q gi|255764501|r 270 S 270 (535)
Q Consensus 270 ~ 270 (535)
T Consensus 278 ~ 278 (280)
T PRK10561 278 R 278 (280)
T ss_pred E
T ss_conf 2