>TIGR00969 3a0106s02 sulfate ABC transporter, permease protein; InterPro: IPR005667 Bacterial binding protein-dependent transport systems , are multicomponent systems typically composed of a periplasmic substrate-binding protein, one or two reciprocally homologous integral inner-membrane proteins and one or two peripheral membrane ATP-binding proteins that couple energy to the active transport system. The integral inner-membrane proteins translocate the substrate across the membrane. It has been shown , that most of these proteins contain a conserved region located about 80 to 100 residues from their C-terminal extremity. This region seems to be located in a cytoplasmic loop between two transmembrane domains. Apart from the conserved region, the sequence of these proteins is quite divergent, and they have a variable number of transmembrane helices, This entry describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulphate ABC transporter; GO: 0015563 uptake transmembrane transporter activity, 0006810 transport, 0016020 membrane.

Probab=100.00 E-value=1.3e-43 Score=248.83 Aligned_cols=240 Identities=15% Similarity=0.281 Sum_probs=215.1 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCH--HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 6999999999999741232210001100--13467643835479999999999997656652111122100022115651 Q gi|255764501|r 289 WWDFFLISCAIWFFILPLLAIIIEGMNA--KLLLRLLQQSGLWSSFFNSIYIAINAGVLCMIFTIMLLWTKRELRLRRLK 366 (535) Q Consensus 289 ~~~~~~~~~~~l~~i~pl~~ii~~~~~~--~~~~~~~~~~~~~~a~~~Sl~~s~~~~~i~~~l~l~~a~~~~~~~~~~~~ 366 (535) T Consensus 26 alI~~~l~Y~~liL~lP~~~l~~~~f~~gl~~~~~~~tdP~~~~A~~lT~~~aliav~lN~vFG~~~AWvLtR~~FP--- 102 (280) T TIGR00969 26 ALIGIALLYVFLILLLPVIALFVQAFSKGLEQFWQNATDPNAVSAYNLTLLMALIAVPLNGVFGLLIAWVLTRYQFP--- 102 (280) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--- T ss_conf 99999999999999999999999997459889999842988999999999999999999999999999999712698--- Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC----------CCCCCCCCCCEEEEEEECHHHHHHHHHHHHHCCHHH Q ss_conf 2679999999746553237667664301234677----------566553443102465212156999999897289778 Q gi|255764501|r 367 FFNHIFELSELLILAVPSIVLAVGFFLLLKNTVN----------LTSSSYSLIIVTNALMAVPYAVKILENPMYDLAERY 436 (535) Q Consensus 367 ~~~~~~~~~~~lp~~iP~iv~~~~~~~~~~~~~~----------~~~~~~~~iila~~~~~lP~~~~~l~~~l~~i~~~l 436 (535) T Consensus 103 -Gr~lLda~~DLPFAlspvVAGL~l~llYg~~Gw~G~~~~~fgiqI~F~~~G~~lAmiFvs~PFVvRev~PVL~Elg~e~ 181 (280) T TIGR00969 103 -GRKLLDALIDLPFALSPVVAGLTLALLYGSNGWLGSWLASFGIQIIFTWPGVALAMIFVSLPFVVREVQPVLEELGTEA 181 (280) T ss_pred -CHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCHHHHCCCEEEEECCCEEEEEEEECCCCEEEEECCCHHHCCCCH T ss_conf -2589999862133425067533000453577851132301786899841214666534216804543100134138557 Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC---CCCCHHHHHHHHHHHCCCCHHHHHHHH Q ss_conf 99999739787699999999954689999999999998511011678648---983028989998861798136999999 Q gi|255764501|r 437 NALCISLQIKGINRLYLIEFKALKRLMAQTFSFSCLLSIGDFGIIALFGN---DNFCTLPCYLYQQLGSYRQSDAVVTAL 513 (535) Q Consensus 437 ~eaA~~lGa~~~~~f~~I~lPll~p~i~~~~~l~f~~s~~e~~~~~ll~~---~~~~Tl~~~i~~~~~~~~~~~a~a~a~ 513 (535) T Consensus 182 EEAA~tLGA~~WQtFwRV~LP~i~w~llyGv~Lt~aRAlGEFGaV~~vSgni~gkt~~lplli~~~l~~Yd~~gA~~ia~ 261 (280) T TIGR00969 182 EEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAVVVVSGNIPGKTLTLPLLIFERLEQYDYPGAYVIAA 261 (280) T ss_pred HHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH T ss_conf 89998628998302678766887267888678765565430110789944688631201566444766036078999999 Q ss_pred HHHHHHHHHHHHHHHHHCC Q ss_conf 9999999999999997146 Q gi|255764501|r 514 LLLSLCLGLFSLLEYLSGK 532 (535) Q Consensus 514 il~~i~~~~~~l~~~l~~r 532 (535) T Consensus 262 vL~l~slv~L~~~~~Lq~R 280 (280) T TIGR00969 262 VLLLVSLVTLFLINLLQAR 280 (280) T ss_pred HHHHHHHHHHHHHHHHHCC T ss_conf 9999999999999985039

HHsearch alignment for GI: 255764501 and conserved domain: TIGR00969