HHsearch alignment for GI: 255764501 and conserved domain: TIGR00974
>TIGR00974 3a0107s02c phosphate ABC transporter, permease protein PstA; InterPro: IPR005672 Bacterial binding protein-dependent transport systems , are multicomponent systems typically composed of a periplasmic substrate-binding protein, one or two reciprocally homologous integral inner-membrane proteins and one or two peripheral membrane ATP-binding proteins that couple energy to the active transport system. The integral inner-membrane proteins translocate the substrate across the membrane. It has been shown , that most of these proteins contain a conserved region located about 80 to 100 residues from their C-terminal extremity. This region seems to be located in a cytoplasmic loop between two transmembrane domains. Apart from the conserved region, the sequence of these proteins is quite divergent, and they have a variable number of transmembrane helices,; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0015114 phosphate transmembrane transporter activity, 0006817 phosphate transport, 0009276 1-2nm peptidoglycan-based cell wall.
Probab=99.90 E-value=6.9e-23 Score=138.52 Aligned_cols=207 Identities=16% Similarity=0.153 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCC
Q ss_conf 35479999999999997656652111122100022115651267999999974655323766766430123467---756
Q gi|255764501|r 326 SGLWSSFFNSIYIAINAGVLCMIFTIMLLWTKRELRLRRLKFFNHIFELSELLILAVPSIVLAVGFFLLLKNTV---NLT 402 (535)
Q Consensus 326 ~~~~~a~~~Sl~~s~~~~~i~~~l~l~~a~~~~~~~~~~~~~~~~~~~~~~~lp~~iP~iv~~~~~~~~~~~~~---~~~ 402 (535)
T Consensus 57 GGi~~AivGT~~~~~~~~~ia~PlGi~~aiYL~EYa~--~~~~~~~ir~~~~~LaG~PSIv~GLFg~~~fv~~~~i~l~~ 134 (302)
T TIGR00974 57 GGIGPAIVGTLLLILLAIVIAVPLGIGAAIYLAEYAK--EGRFTKFIRFAVDVLAGVPSIVVGLFGYALFVKTLGIYLGG 134 (302)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5336779999999999999999999998887553067--89400568788887521169999999999999776864522
Q ss_pred CCCCCCCC-EEEEEEECHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 65534431-02465212156999999897289778999997397876999999999546899999999999985110116
Q gi|255764501|r 403 SSSYSLII-VTNALMAVPYAVKILENPMYDLAERYNALCISLQIKGINRLYLIEFKALKRLMAQTFSFSCLLSIGDFGII 481 (535)
Q Consensus 403 ~~~~~~ii-la~~~~~lP~~~~~l~~~l~~i~~~l~eaA~~lGa~~~~~f~~I~lPll~p~i~~~~~l~f~~s~~e~~~~ 481 (535)
T Consensus 135 ~~S~laG~~LaLa~L~LP~iirtTeEal~~VP~~~Reas~ALGa~Kw~TI~~~vLP~A~~GI~TG~iL~iaR~~GETAPL 214 (302)
T TIGR00974 135 GFSALAGALLALAILILPVIIRTTEEALKAVPKDLREASLALGATKWQTILKIVLPAALPGILTGIILSIARAAGETAPL 214 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 06778799999999999999999899997247888899997260021133224413103689999999999999989999
Q ss_pred EE---------EC-----------------CCCCCHHHHHHHHHHHC----CCC---H-HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78---------64-----------------89830289899988617----981---3-699999999999999999999
Q gi|255764501|r 482 AL---------FG-----------------NDNFCTLPCYLYQQLGS----YRQ---S-DAVVTALLLLSLCLGLFSLLE 527 (535)
Q Consensus 482 ~l---------l~-----------------~~~~~Tl~~~i~~~~~~----~~~---~-~a~a~a~il~~i~~~~~~l~~ 527 (535)
T Consensus 215 l~TA~~~~~~~~~~~~~N~~~~~p~~~d~l~~~~~~L~~~iY~~~~~~~~~~~~~~~~~~a~~aalvL~~~vl~~N~~a~ 294 (302)
T TIGR00974 215 LFTAGGSSSFLLGNSVLNDLPKAPLGEDLLLSPPAALPVLIYNLASELANAPYSEARNELAWAAALVLIVLVLLLNLIAR 294 (302)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999887764103566777677777542257641368888876401467884268889999999999999999999999
Q ss_pred HHHCCCC
Q ss_conf 9714668
Q gi|255764501|r 528 YLSGKEY 534 (535)
Q Consensus 528 ~l~~r~~ 534 (535)
T Consensus 295 ~~~~~~~ 301 (302)
T TIGR00974 295 LLRRRFK 301 (302)
T ss_pred HHHHHHC
T ss_conf 9997524