HHsearch alignment for GI: 255764501 and conserved domain: cd06261

>cd06261 TM_PBP2 Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. F
Probab=99.95  E-value=1.3e-27  Score=163.72  Aligned_cols=184  Identities=16%  Similarity=0.208  Sum_probs=149.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCCCC
Q ss_conf             99999999997656652111122100022115651267999999974655323766766430123467756--6553443
Q gi|255764501|r  332 FFNSIYIAINAGVLCMIFTIMLLWTKRELRLRRLKFFNHIFELSELLILAVPSIVLAVGFFLLLKNTVNLT--SSSYSLI  409 (535)
Q Consensus       332 ~~~Sl~~s~~~~~i~~~l~l~~a~~~~~~~~~~~~~~~~~~~~~~~lp~~iP~iv~~~~~~~~~~~~~~~~--~~~~~~i  409 (535)
T Consensus         1 l~nSl~i~~~~~~i~~~ig~~~a~~~~~----~~~~~~~~~~~~~~i~~~iP~~v~~~~~~~~~~~~~~~~~~~~~~~~~   76 (190)
T cd06261           1 LLNTLLLALIATLLALVLGLLLGIILAR----KRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGLGLPA   76 (190)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf             9879999999999999999999999995----185088999999999998039999999999998412322147899999


Q ss_pred             CEEEEEEECHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf             10246521215699999989728977899999739787699999999954689999999999998511011678648983
Q gi|255764501|r  410 IVTNALMAVPYAVKILENPMYDLAERYNALCISLQIKGINRLYLIEFKALKRLMAQTFSFSCLLSIGDFGIIALFGNDNF  489 (535)
Q Consensus       410 ila~~~~~lP~~~~~l~~~l~~i~~~l~eaA~~lGa~~~~~f~~I~lPll~p~i~~~~~l~f~~s~~e~~~~~ll~~~~~  489 (535)
T Consensus        77 i~~~~~~~~p~~~~~~~~~l~~i~~~~~eaA~~~Ga~~~~~~~~i~lP~~~p~i~~~~~l~~~~~~~~~~~~~~l~~~~~  156 (190)
T cd06261          77 LILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEA  156 (190)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             99999999999999999999838999999999869973465699879963999999999999999999999999968999


Q ss_pred             CHHHHHH---HHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf             0289899---98861798136999999999999
Q gi|255764501|r  490 CTLPCYL---YQQLGSYRQSDAVVTALLLLSLC  519 (535)
Q Consensus       490 ~Tl~~~i---~~~~~~~~~~~a~a~a~il~~i~  519 (535)
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~  189 (190)
T cd06261         157 PGPGTGLLLIFAILFPGDLGVAAAVALILLLLS  189 (190)
T ss_pred             CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             968399999999987578699999999999997