HHsearch alignment for GI: 255764504 and conserved domain: cd00315
>cd00315 Cyt_C5_DNA_methylase Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG dinucleotide, has profound effects on the mammalian genome. These effects include transcriptional repression via inhibition of transcription factor binding or the recruitment of methyl-binding proteins and their associated chromatin remodeling factors, X chromosome inactivation, imprinting and the suppression of parasitic DNA sequences. DNA methylation is also essential for proper embryonic development and is an important player in both DNA repair and genome stability.
Probab=99.11 E-value=1.3e-10 Score=81.41 Aligned_cols=44 Identities=43% Similarity=0.689 Sum_probs=32.0
Q ss_pred CCHHHCCCCCCCCEEEEEEEECCCCCCC---CCCCCCCCCCHHHHHC
Q ss_conf 9834357973762799999847888755---8887777778445312
Q gi|255764504|r 1 MKACDFGVPQRRERLYIIDFLNPSVEFK---FPTPLGIKPRLGDILE 44 (101)
Q Consensus 1 Lna~dfGvPQ~ReRvfiVg~~~~~~~f~---~P~~~~~~~~l~diL~ 44 (101)
T Consensus 143 l~a~~~GvPQ~R~R~fiva~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 189 (275)
T cd00315 143 LNASDYGVPQNRERVFIIGIRKDLILNFFSPFPKPSEKKKTLKDILR 189 (275)
T ss_pred ECHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHC
T ss_conf 67999799977618999988688775556778888566575999860