HHSEARCH alignment of GI: 255764504 and SCOP domain: d2c7pa1

Alignment
>d2c7pa1 c.66.1.26 (A:1-327) DNA methylase HhaI {Haemophilus haemolyticus [TaxId: 726]}
Probab=99.28  E-value=2.1e-13  Score=94.65  Aligned_cols=55  Identities=33%  Similarity=0.680  Sum_probs=47.4

Q ss_pred             CCHHHCCCCCCCCEEEEEEEECCC--CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCH
Q ss_conf             983435797376279999984788--8755888777777844531256774323468
Q gi|255764504|r    1 MKACDFGVPQRRERLYIIDFLNPS--VEFKFPTPLGIKPRLGDILEEHIDDKSTISN   55 (101)
Q Consensus         1 Lna~dfGvPQ~ReRvfiVg~~~~~--~~f~~P~~~~~~~~l~diL~~~vd~k~~ls~   55 (101)
                      |||+||||||+|+|+||||++++.  ..+.||++......++|+|++..+.++.+.+
T Consensus       152 l~a~~~GvPQ~R~R~fivg~r~~~~~~~~~~p~p~~~~~~i~d~l~~~~~~~~~~~~  208 (327)
T d2c7pa1         152 LNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVID  208 (327)
T ss_dssp             EEGGGGTCSBCCEEEEEEEEBGGGCCCCCCCCCCCCCCCCGGGTCCCGGGTGGGEEC
T ss_pred             ECHHHCCCCCHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
T ss_conf             238980898465443253123675533112222223454333311346412331134


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: C5 cytosine-specific DNA methylase, DCM
domain: DNA methylase HhaI
species: Haemophilus haemolyticus [TaxId: 726]