HHsearch alignment for GI: 255764505 and conserved domain: COG1125
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].
Probab=95.11 E-value=0.25 Score=30.07 Aligned_cols=227 Identities=20% Similarity=0.167 Sum_probs=108.7
Q ss_pred EECCCEEEEE--ECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCH-----HHHCCCCEEE-E---EEECCCCCCCCCHHH
Q ss_conf 2104707898--368780788766666320456279984478895-----4521453376-8---861554324752178
Q gi|255764505|r 109 ITRDDLIIVL--SWSGSSDELKAILYYARRFSIPLIAITSENKSV-----VACHADIVLT-L---PKEPESCPHGLAPTT 177 (341)
Q Consensus 109 i~~~Dv~i~i--S~SG~t~e~~~~~~~~k~~~~~iI~iT~~~~S~-----la~~ad~~l~-~---~~~~Ea~~~~~aPt~ 177 (341)
T Consensus 24 I~~gef~vliGpSGsGKTT-tLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L 102 (309)
T COG1125 24 IEEGEFLVLIGPSGSGKTT-TLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKL 102 (309)
T ss_pred ECCCEEEEEECCCCCCHHH-HHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 6597289998789975787-999996055888853898990446588899987533542221567763598778761554
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH-H--HHHHHHHHHCCCCC-----CEE--EEE--HHHHHHHHHH
Q ss_conf 9999999999999999985033878887531100111-1--24333332104754-----305--510--0238888987
Q gi|255764505|r 178 SAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-T--LFVCASDVMHSGDS-----IPL--VKI--GCPLIDAITI 245 (341)
Q Consensus 178 Stt~~l~~~Dalav~l~~~~~~t~~df~~~HPgG~lg-~--~Ll~V~DiM~~~~~-----ip~--V~~--~~si~eal~~ 245 (341)
T Consensus 103 ~~w~-k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALA-adP~ilLMDEPFgALDpI~R~~lQ~e~~~ 180 (309)
T COG1125 103 LGWD-KERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALA-ADPPILLMDEPFGALDPITRKQLQEEIKE 180 (309)
T ss_pred CCCC-HHHHHHHHHHHHHHHCCCHHHHHHCCCHHCCCCHHHHHHHHHHHH-CCCCEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 1779-899999999999984989789732092221862135888999974-19886863488554476549999999999
Q ss_pred HH-CCCCCEEEECCC---------------CCEEEEEEECCCH--------HHHH-HC------CCCCCCHHHHCCCCCE
Q ss_conf 41-046620000004---------------3232324123403--------5676-17------8233709883488978
Q gi|255764505|r 246 LS-EKRFGCVAVVDE---------------GQKLKGIITEGDI--------FRNF-HK------DLNTLSVEDVMIKNPK 294 (341)
Q Consensus 246 m~-~~~~g~v~Vvd~---------------~~~liGIITdgDl--------rR~l-~~------~~~~~~v~~iMt~~p~ 294 (341)
T Consensus 181 lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan~FV~~f~g~~~~~~~~l~~~~~~~~~~~~~~ 260 (309)
T COG1125 181 LQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPANDFVEDFFGESERGLRLLSLVSVADAVRRGEP 260 (309)
T ss_pred HHHHHCCEEEEEECCHHHHHHHHCEEEEECCCEEEEECCHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCC
T ss_conf 99985987999935788988643248985187289867889987285288999984666310122223447776424664
Q ss_pred ----EECCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHHHHC
Q ss_conf ----97799878999999996799589998069848999858889743
Q gi|255764505|r 295 ----VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338 (341)
Q Consensus 295 ----~I~~d~~i~eAl~lM~~~kI~~LpVVD~~~~lvGiIt~~DLlka 338 (341)
T Consensus 261 ~~~~~~~~~~~~~~~ls~~~~~~~~~~~Vvd~~g~~~G~vt~~~l~~~ 308 (309)
T COG1125 261 ADGEPLLEGFVDRDALSDFLARGRSVLPVVDEDGRPLGTVTRADLLDE 308 (309)
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHH
T ss_conf 567764410445899999986687246788799967658879987523