HHsearch alignment for GI: 255764505 and conserved domain: COG1125

>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].
Probab=95.11  E-value=0.25  Score=30.07  Aligned_cols=227  Identities=20%  Similarity=0.167  Sum_probs=108.7

Q ss_pred             EECCCEEEEE--ECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCH-----HHHCCCCEEE-E---EEECCCCCCCCCHHH
Q ss_conf             2104707898--368780788766666320456279984478895-----4521453376-8---861554324752178
Q gi|255764505|r  109 ITRDDLIIVL--SWSGSSDELKAILYYARRFSIPLIAITSENKSV-----VACHADIVLT-L---PKEPESCPHGLAPTT  177 (341)
Q Consensus       109 i~~~Dv~i~i--S~SG~t~e~~~~~~~~k~~~~~iI~iT~~~~S~-----la~~ad~~l~-~---~~~~Ea~~~~~aPt~  177 (341)
T Consensus        24 I~~gef~vliGpSGsGKTT-tLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L  102 (309)
T COG1125          24 IEEGEFLVLIGPSGSGKTT-TLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKL  102 (309)
T ss_pred             ECCCEEEEEECCCCCCHHH-HHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf             6597289998789975787-999996055888853898990446588899987533542221567763598778761554


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH-H--HHHHHHHHHCCCCC-----CEE--EEE--HHHHHHHHHH
Q ss_conf             9999999999999999985033878887531100111-1--24333332104754-----305--510--0238888987
Q gi|255764505|r  178 SAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-T--LFVCASDVMHSGDS-----IPL--VKI--GCPLIDAITI  245 (341)
Q Consensus       178 Stt~~l~~~Dalav~l~~~~~~t~~df~~~HPgG~lg-~--~Ll~V~DiM~~~~~-----ip~--V~~--~~si~eal~~  245 (341)
T Consensus       103 ~~w~-k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALA-adP~ilLMDEPFgALDpI~R~~lQ~e~~~  180 (309)
T COG1125         103 LGWD-KERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALA-ADPPILLMDEPFGALDPITRKQLQEEIKE  180 (309)
T ss_pred             CCCC-HHHHHHHHHHHHHHHCCCHHHHHHCCCHHCCCCHHHHHHHHHHHH-CCCCEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf             1779-899999999999984989789732092221862135888999974-19886863488554476549999999999


Q ss_pred             HH-CCCCCEEEECCC---------------CCEEEEEEECCCH--------HHHH-HC------CCCCCCHHHHCCCCCE
Q ss_conf             41-046620000004---------------3232324123403--------5676-17------8233709883488978
Q gi|255764505|r  246 LS-EKRFGCVAVVDE---------------GQKLKGIITEGDI--------FRNF-HK------DLNTLSVEDVMIKNPK  294 (341)
Q Consensus       246 m~-~~~~g~v~Vvd~---------------~~~liGIITdgDl--------rR~l-~~------~~~~~~v~~iMt~~p~  294 (341)
T Consensus       181 lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan~FV~~f~g~~~~~~~~l~~~~~~~~~~~~~~  260 (309)
T COG1125         181 LQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPANDFVEDFFGESERGLRLLSLVSVADAVRRGEP  260 (309)
T ss_pred             HHHHHCCEEEEEECCHHHHHHHHCEEEEECCCEEEEECCHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCC
T ss_conf             99985987999935788988643248985187289867889987285288999984666310122223447776424664


Q ss_pred             ----EECCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHHHHC
Q ss_conf             ----97799878999999996799589998069848999858889743
Q gi|255764505|r  295 ----VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF  338 (341)
Q Consensus       295 ----~I~~d~~i~eAl~lM~~~kI~~LpVVD~~~~lvGiIt~~DLlka  338 (341)
T Consensus       261 ~~~~~~~~~~~~~~~ls~~~~~~~~~~~Vvd~~g~~~G~vt~~~l~~~  308 (309)
T COG1125         261 ADGEPLLEGFVDRDALSDFLARGRSVLPVVDEDGRPLGTVTRADLLDE  308 (309)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHH
T ss_conf             567764410445899999986687246788799967658879987523