HHsearch alignment for GI: 255764505 and conserved domain: COG1737

>COG1737 RpiR Transcriptional regulators [Transcription].
Probab=99.94  E-value=6.7e-25  Score=201.59  Aligned_cols=193  Identities=28%  Similarity=0.318  Sum_probs=163.4

Q ss_pred             HHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             67888655765533----------24579999999999999999999997200113669999999982799599993381
Q gi|255764505|r    5 FSHFKSVTRKGHSL----------MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK   74 (341)
Q Consensus         5 ~~~~~~~~~~~~~~----------~~~~~~~~a~~~l~~e~~al~~l~~~l~~~~~~~~~~av~~i~~~~grv~~~GvG~   74 (341)
T Consensus        65 f~efk~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~l~~---~~l~~av~~L~~A~-rI~~~G~g~  140 (281)
T COG1737          65 FSEFKLALAQELAEGRAQLLREIAEDDGPESILEKLLAANIAALERTLNLLDE---EALERAVELLAKAR-RIYFFGLGS  140 (281)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH---HHHHHHHHHHHCCC-CEEEEECCC
T ss_conf             89999999999763333100002456754689999999999999999853689---99999999997069-579996483


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHH
Q ss_conf             37999999999875088611012330232023012104707898368780788766666320456279984478895452
Q gi|255764505|r   75 SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC  154 (341)
Q Consensus        75 S~~ia~k~a~tl~s~G~~a~~~~~~ea~Hgdlg~i~~~Dv~i~iS~SG~t~e~~~~~~~~k~~~~~iI~iT~~~~S~la~  154 (341)
T Consensus       141 S~~vA~~~~~~l~~ig~~~~~~~d~~~~~~~~~~~~~~Dv~i~iS~sG~t~e~i~~a~~ak~~ga~vIaiT~~~~spla~  220 (281)
T COG1737         141 SGLVASDLAYKLMRIGLNVVALSDTHGQLMQLALLTPGDVVIAISFSGYTREIVEAAELAKERGAKVIAITDSADSPLAK  220 (281)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHH
T ss_conf             59999999999998199669966841799999838999889998489996899999999997799299983999993666


Q ss_pred             CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf             1453376886155432475217899999999999999999850338788
Q gi|255764505|r  155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND  203 (341)
Q Consensus       155 ~ad~~l~~~~~~Ea~~~~~aPt~Stt~~l~~~Dalav~l~~~~~~t~~d  203 (341)
T Consensus       221 ~Ad~~L~~~~~~~~~~~~--~~~s~~a~l~l~d~L~~~~~~~~~~~~~~  267 (281)
T COG1737         221 LADIVLLVPVAEESFFRS--PISSRIAQLALIDALITAVAQRRGEAALK  267 (281)
T ss_pred             HCCEEEEECCCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             547788712676322255--60788999999999999999874688999