HHsearch alignment for GI: 255764505 and conserved domain: COG3448

Probab=99.48  E-value=1.8e-13  Score=118.49  Aligned_cols=143  Identities=24%  Similarity=0.315  Sum_probs=118.0

Q ss_pred             HHHCCCCHHHHHHHHHH---HHHHHH-H-HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEE
Q ss_conf             98503387888753110---011112-4-333332104754305510023888898741046620000004323232412
Q gi|255764505|r  194 LESRNFSENDFYVLHPG---GKLGTL-F-VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT  268 (341)
Q Consensus       194 ~~~~~~t~~df~~~HPg---G~lg~~-L-l~V~DiM~~~~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIIT  268 (341)
T Consensus       216 ~E~lDIdrddLe~llr~~elqa~~R~~~~LtcadIMSr--dVvtv~~~ts~dhA~~ll~~H~ikaLPV~d~~~rl~GiVt  293 (382)
T COG3448         216 GETLDIDRDDLERLLRETELQALRRRMGELTCADIMSR--DVVTVSTDTSIDHARKLLQEHRIKALPVLDEHRRLVGIVT  293 (382)
T ss_pred             CCEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC--CCEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
T ss_conf             85015788999999999999999998564308886374--5350177677579999999768650453266661003244


Q ss_pred             CCCHHHHHH----C---CCCCCCHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHHHHC
Q ss_conf             340356761----7---823370988348897897799878999999996799589998069848999858889743
Q gi|255764505|r  269 EGDIFRNFH----K---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF  338 (341)
Q Consensus       269 dgDlrR~l~----~---~~~~~~v~~iMt~~p~~I~~d~~i~eAl~lM~~~kI~~LpVVD~~~~lvGiIt~~DLlka  338 (341)
T Consensus       294 ~~dl~~~a~~~p~qrlr~~~~~~vk~imt~~v~tv~pdtpa~~lvp~lad~g~H~lpvld~~g~lvGIvsQtDliaa  370 (382)
T COG3448         294 QRDLLKHARPSPFQRLRFLRPPTVKGIMTTPVVTVRPDTPAVELVPRLADEGLHALPVLDAAGKLVGIVSQTDLIAA  370 (382)
T ss_pred             HHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEEHHHHHHH
T ss_conf             88776016856677753159986344345763353589708888887613773136688688838888627889999