HHsearch alignment for GI: 255764505 and conserved domain: COG3620
>COG3620 Predicted transcriptional regulator with C-terminal CBS domains [Transcription].
Probab=99.47 E-value=4e-13 Score=115.90 Aligned_cols=160 Identities=27% Similarity=0.394 Sum_probs=129.0
Q ss_pred CCCHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 88954521453376886155432475217899999999999999999850338788875311001111243333321047
Q gi|255764505|r 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG 227 (341)
Q Consensus 148 ~~S~la~~ad~~l~~~~~~Ea~~~~~aPt~Stt~~l~~~Dalav~l~~~~~~t~~df~~~HPgG~lg~~Ll~V~DiM~~~ 227 (341)
T Consensus 20 tQ~dLA~~aGVSQ~~IArlE~G~vd--PrlSt~k~--Il~aL----~e~e~-----------------~~ita~~iM~s- 73 (187)
T COG3620 20 TQKDLARRAGVSQPYIARLEAGKVD--PRLSTVKR--ILEAL----EEAEK-----------------TRITAKTIMHS- 73 (187)
T ss_pred CHHHHHHHCCCCHHHHHHHHCCCCC--CCHHHHHH--HHHHH----HHHHC-----------------CEEEHHHHCCC-
T ss_conf 7899998708648889998638879--30899999--99999----98546-----------------66757665358-
Q ss_pred CCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHC---CCCCCCHHHHCCCCCEEECCCCCHHH
Q ss_conf 543055100238888987410466200000043232324123403567617---82337098834889789779987899
Q gi|255764505|r 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTV 304 (341)
Q Consensus 228 ~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~l~~---~~~~~~v~~iMt~~p~~I~~d~~i~e 304 (341)
T Consensus 74 -pvv~v~pdDsi~~vv~lM~~~g~SQlPVi~~-~k~VGsItE~~iv~~~le~~e~i~~~~vr~vM~e~fP~Vs~~~~l~v 151 (187)
T COG3620 74 -PVVSVSPDDSISDVVNLMRDKGISQLPVIEE-DKVVGSITENDIVRALLEGMESIRSLRVREVMGEPFPTVSPDESLNV 151 (187)
T ss_pred -CEEEECCHHHHHHHHHHHHHCCCCCCCEEEC-CEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHH
T ss_conf -7058772466999999999759752754108-86453314989999973042212112189885588876799998799
Q ss_pred HHHHHHHCCCCEEEEEECCCEEEEEEEHHHHHHC
Q ss_conf 9999996799589998069848999858889743
Q gi|255764505|r 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338 (341)
Q Consensus 305 Al~lM~~~kI~~LpVVD~~~~lvGiIt~~DLlka 338 (341)
T Consensus 152 I~~LL~~~~--AVlV~-e~G~~vGIITk~DI~k~ 182 (187)
T COG3620 152 ISQLLEEHP--AVLVV-ENGKVVGIITKADIMKL 182 (187)
T ss_pred HHHHHHHCC--EEEEE-ECCCEEEEEEHHHHHHH
T ss_conf 999984198--38998-68936888759999998