HHsearch alignment for GI: 255764505 and conserved domain: COG4109
>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription].
Probab=96.83 E-value=0.003 Score=43.99 Aligned_cols=58 Identities=21% Similarity=0.317 Sum_probs=50.2
Q ss_pred HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHH
Q ss_conf 333332104754305510023888898741046620000004323232412340356761
Q gi|255764505|r 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277 (341)
Q Consensus 218 l~V~DiM~~~~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~l~ 277 (341)
T Consensus 249 t~ieKVMtk--np~tv~~~tsVAsvaq~MiwE~iem~PVv~~n~~llGiitR~dvlk~lq 306 (432)
T COG4109 249 TTIEKVMTK--NPITVRAKTSVASVAQMMIWEGIEMLPVVDSNNTLLGIITRQDVLKSLQ 306 (432)
T ss_pred CCHHHHHCC--CCEEECCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEHHHHHHHHH
T ss_conf 617777426--9755425226889988887645526568837861898988999999998