HHsearch alignment for GI: 255764505 and conserved domain: PRK11557

>PRK11557 putative DNA-binding transcriptional regulator; Provisional.
Probab=99.93  E-value=2.2e-24  Score=197.81  Aligned_cols=187  Identities=21%  Similarity=0.243  Sum_probs=147.9

Q ss_pred             HHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             67888655765533--------------2457999999999999999999999720011366999999998279959999
Q gi|255764505|r    5 FSHFKSVTRKGHSL--------------MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT   70 (341)
Q Consensus         5 ~~~~~~~~~~~~~~--------------~~~~~~~~a~~~l~~e~~al~~l~~~l~~~~~~~~~~av~~i~~~~grv~~~   70 (341)
T Consensus        63 f~efK~~l~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~l~~t---~~~~~~~~l~~av~~i~~A~-~I~i~  138 (282)
T PRK11557         63 FPALKLALSEALASQPEPPSVPVHNQIRGDDPLRLVGEKLIKENTAAMYAT---LDVNSEEKLHECVTMLRSAR-RIILT  138 (282)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HHCCCHHHHHHHHHHHHCCC-CEEEE
T ss_conf             999999999998614564334212446767759999999999999999999---83368999999999996489-58999


Q ss_pred             ECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf             33813799999999987508861101233023202301210470789836878078876666632045627998447889
Q gi|255764505|r   71 GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS  150 (341)
Q Consensus        71 GvG~S~~ia~k~a~tl~s~G~~a~~~~~~ea~Hgdlg~i~~~Dv~i~iS~SG~t~e~~~~~~~~k~~~~~iI~iT~~~~S  150 (341)
T Consensus       139 G~G~S~~vA~~~~~kl~rig~~~~~~~d~~~~~~~~~~l~~~Dv~I~iS~sG~t~~~~~~~~~Ak~~Ga~iIaIT~~~~s  218 (282)
T PRK11557        139 GIGASGLVAQNFAWKLMKIGINAVAERDMHALLATVQALSPDDLLLAISYSGERRELNLAADEALRVGGKVLAITGFTPN  218 (282)
T ss_pred             ECCCHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf             70436999999999999809963740886899999981899998999859999789999999999879939997298998


Q ss_pred             HHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             54521453376886155432475217899999999999999999850
Q gi|255764505|r  151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR  197 (341)
Q Consensus       151 ~la~~ad~~l~~~~~~Ea~~~~~aPt~Stt~~l~~~Dalav~l~~~~  197 (341)
T Consensus       219 pLa~~aD~~L~~~~~e--~~~~~~~~~s~~a~l~iiD~L~~~~~~~~  263 (282)
T PRK11557        219 ALQQRASHCLYTIAEE--QATRSAAISSTHAQGMLTDLLFMALIQQD  263 (282)
T ss_pred             CHHHHCCEEEEECCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             1588699999847853--10134343999999999999999999978