HHsearch alignment for GI: 255764505 and conserved domain: cd04586
>cd04586 CBS_pair_BON_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. BON is a putative phospholipid-binding domain found in a family of osmotic shock protection proteins. It is also found in some secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=99.81 E-value=4e-19 Score=159.53 Aligned_cols=110 Identities=29% Similarity=0.427 Sum_probs=99.4
Q ss_pred CCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHC------------------------CCCCC
Q ss_conf 543055100238888987410466200000043232324123403567617------------------------82337
Q gi|255764505|r 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------------------------DLNTL 283 (341)
Q Consensus 228 ~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~l~~------------------------~~~~~ 283 (341)
T Consensus 2 ~~vitv~~~~tl~~a~~~m~~~~i~~lpVvd~~~~lvGiit~~Dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
T cd04586 2 TDVVTVSPETSVAEAARLMLDNHISGLPVVDDDGRLVGIVSEGDLLRRAELGTERRRARWLDLLAGAEELAAAFVRSHGR 81 (135)
T ss_pred CCCEEECCCCCHHHHHHHHHHHCCCEEEEEECCCEEEEEEEHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCCCC
T ss_conf 99989999393999999999739967999908997999998189764454156541145554302310345543044798
Q ss_pred CHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHHHHC
Q ss_conf 0988348897897799878999999996799589998069848999858889743
Q gi|255764505|r 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338 (341)
Q Consensus 284 ~v~~iMt~~p~~I~~d~~i~eAl~lM~~~kI~~LpVVD~~~~lvGiIt~~DLlka 338 (341)
T Consensus 82 ~V~~iM~~~~~~v~~~~~l~~~~~~m~~~~i~~lpVvd~-~~lvGiIt~~DilkA 135 (135)
T cd04586 82 KVADVMTRPVVTVGEDTPLAEVAELMEEHRIKRVPVVRG-GRLVGIVSRADLLRA 135 (135)
T ss_pred CHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEEEC-CEEEEEEEHHHHHCC
T ss_conf 989957899879959795999999999759609999999-999999997996459