HHsearch alignment for GI: 255764505 and conserved domain: cd04614
>cd04614 CBS_pair_1 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=99.78 E-value=1.1e-18 Score=156.32 Aligned_cols=94 Identities=27% Similarity=0.402 Sum_probs=89.7
Q ss_pred CCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHCCCCCCCHHHHCCCCCEEECCCCCHHHHHHH
Q ss_conf 43055100238888987410466200000043232324123403567617823370988348897897799878999999
Q gi|255764505|r 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308 (341)
Q Consensus 229 ~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~l~~~~~~~~v~~iMt~~p~~I~~d~~i~eAl~l 308 (341)
T Consensus 2 dv~tv~~~~~v~~a~~~m~~~~i~~lpVvd~~g~lvGIiT~rDli~---------------~~~~itv~~~~~v~eaa~l 66 (96)
T cd04614 2 NVPTVWEETPLPVAVRIMELANVKALPVLDDDGKLSGIITERDLIA---------------KSEVVTATKRTTVSECAQK 66 (96)
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEECHHHCC---------------CCCCEEECCCCCHHHHHHH
T ss_conf 9639089698999999999729987999989994999998888825---------------7788797998909999999
Q ss_pred HHHCCCCEEEEEECCCEEEEEEEHHHHHH
Q ss_conf 99679958999806984899985888974
Q gi|255764505|r 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337 (341)
Q Consensus 309 M~~~kI~~LpVVD~~~~lvGiIt~~DLlk 337 (341)
T Consensus 67 M~~~~I~~LPVvd~~~~lvGiit~~Dllk 95 (96)
T cd04614 67 MKRNRIEQIPIINGNDKLIGLLRDHDLLK 95 (96)
T ss_pred HHHCCCCEEEEECCCCCEEEEEEHHHCCC
T ss_conf 99859988628989991999988798048