HHsearch alignment for GI: 255764505 and conserved domain: cd04617
>cd04617 CBS_pair_4 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=98.55 E-value=2.5e-07 Score=73.71 Aligned_cols=74 Identities=22% Similarity=0.256 Sum_probs=57.7
Q ss_pred CCHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCC---EEEEEEECCCHHH
Q ss_conf 387888753-110011112433333210475430551002388889874104662000000432---3232412340356
Q gi|255764505|r 199 FSENDFYVL-HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFR 274 (341)
Q Consensus 199 ~t~~df~~~-HPgG~lg~~Ll~V~DiM~~~~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~---~liGIITdgDlrR 274 (341)
T Consensus 40 iT~rDl~r~~~~~~~~~~--~pV~~iMT~~P~vvt~~pd~~v~~A~~~M~~~~i~~LPVVd~~~~~~~vvGiIT~~Di~k 117 (118)
T cd04617 40 VSRKDLLKASIGGADLQK--VPVGVIMTRMPNITTTTPEESVLEAAKKLIEHQVDSLPVVEKVDEGLEVIGRITKTNITK 117 (118)
T ss_pred EEHHHHHHHHHCCCCCCC--CCHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEECEEECCCCCEEEEEEEECCCEEC
T ss_conf 878999999974898467--829998577997199789993999999999829998567943997408999997751504