HHsearch alignment for GI: 255764505 and conserved domain: cd04618
>cd04618 CBS_pair_5 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=98.31 E-value=2.6e-06 Score=66.30 Aligned_cols=94 Identities=21% Similarity=0.242 Sum_probs=81.2
Q ss_pred CCEEEEEHHHHHHHHHHHHCCCCCEEEECCC-CCEEEEEEECCCHHHHHHCCCCCCCHHHHCCCCCEEECCCCCHHHHHH
Q ss_conf 4305510023888898741046620000004-323232412340356761782337098834889789779987899999
Q gi|255764505|r 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307 (341)
Q Consensus 229 ~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~-~~~liGIITdgDlrR~l~~~~~~~~v~~iMt~~p~~I~~d~~i~eAl~ 307 (341)
T Consensus 2 kliV~D~~l~vk~Af~al~~ngi~~aplWds~~~~fvGmLt~~DfI~il~---------------lv~i~P~~sL~da~~ 66 (98)
T cd04618 2 KLVVFDTKLPVKKAFNALVENGIRSAPLWDSRKQQFVGMLTITDFILILR---------------LVSIHPERSLFDAAL 66 (98)
T ss_pred EEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEHHHHHHHHH---------------HEECCCCCHHHHHHH
T ss_conf 09999489758999999998692699987288767888864799998876---------------244487612999999
Q ss_pred HHHHCCCCEEEEEECC-CEEEEEEEHHHHHH
Q ss_conf 9996799589998069-84899985888974
Q gi|255764505|r 308 LLRQHNISVLMVVDDC-QKAIGIVHFLDLLR 337 (341)
Q Consensus 308 lM~~~kI~~LpVVD~~-~~lvGiIt~~DLlk 337 (341)
T Consensus 67 ~l~~~~ihrlPvid~~~~~~~~ilt~~~il~ 97 (98)
T cd04618 67 LLLKNKIHRLPVIDPSTGTGLYILTSRRILK 97 (98)
T ss_pred HHHHCCCCCCCCCCCCCCCEEEEEEEEHEEC
T ss_conf 9986787505216479996589996302015