HHsearch alignment for GI: 255764505 and conserved domain: cd04618

>cd04618 CBS_pair_5 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=98.31  E-value=2.6e-06  Score=66.30  Aligned_cols=94  Identities=21%  Similarity=0.242  Sum_probs=81.2

Q ss_pred             CCEEEEEHHHHHHHHHHHHCCCCCEEEECCC-CCEEEEEEECCCHHHHHHCCCCCCCHHHHCCCCCEEECCCCCHHHHHH
Q ss_conf             4305510023888898741046620000004-323232412340356761782337098834889789779987899999
Q gi|255764505|r  229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ  307 (341)
Q Consensus       229 ~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~-~~~liGIITdgDlrR~l~~~~~~~~v~~iMt~~p~~I~~d~~i~eAl~  307 (341)
T Consensus         2 kliV~D~~l~vk~Af~al~~ngi~~aplWds~~~~fvGmLt~~DfI~il~---------------lv~i~P~~sL~da~~   66 (98)
T cd04618           2 KLVVFDTKLPVKKAFNALVENGIRSAPLWDSRKQQFVGMLTITDFILILR---------------LVSIHPERSLFDAAL   66 (98)
T ss_pred             EEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEHHHHHHHHH---------------HEECCCCCHHHHHHH
T ss_conf             09999489758999999998692699987288767888864799998876---------------244487612999999


Q ss_pred             HHHHCCCCEEEEEECC-CEEEEEEEHHHHHH
Q ss_conf             9996799589998069-84899985888974
Q gi|255764505|r  308 LLRQHNISVLMVVDDC-QKAIGIVHFLDLLR  337 (341)
Q Consensus       308 lM~~~kI~~LpVVD~~-~~lvGiIt~~DLlk  337 (341)
T Consensus        67 ~l~~~~ihrlPvid~~~~~~~~ilt~~~il~   97 (98)
T cd04618          67 LLLKNKIHRLPVIDPSTGTGLYILTSRRILK   97 (98)
T ss_pred             HHHHCCCCCCCCCCCCCCCEEEEEEEEHEEC
T ss_conf             9986787505216479996589996302015