HHsearch alignment for GI: 255764505 and conserved domain: cd04621
>cd04621 CBS_pair_8 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=99.83 E-value=6.8e-20 Score=165.18 Aligned_cols=110 Identities=27% Similarity=0.339 Sum_probs=99.9
Q ss_pred CCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHCC-------------------------CCC
Q ss_conf 5430551002388889874104662000000432323241234035676178-------------------------233
Q gi|255764505|r 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-------------------------LNT 282 (341)
Q Consensus 228 ~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~l~~~-------------------------~~~ 282 (341)
T Consensus 1 kdVitv~p~~tl~ea~~~m~~~~i~~lpVvd~~g~lvGivT~~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (135)
T cd04621 1 EDIATVHPEHSLLHVVDEMEKNGVGRVIVVDDNGKPVGVITYRDLAFAEFEDNERGLPKKSIKMKRKAGQKRYRYVKEVP 80 (135)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHCCCCC
T ss_conf 98689899497999999998749977999959993999998799886663145443102333331010023321014468
Q ss_pred CCHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHHHHC
Q ss_conf 70988348897897799878999999996799589998069848999858889743
Q gi|255764505|r 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338 (341)
Q Consensus 283 ~~v~~iMt~~p~~I~~d~~i~eAl~lM~~~kI~~LpVVD~~~~lvGiIt~~DLlka 338 (341)
T Consensus 81 ~~v~diMt~~vitv~~d~~l~~a~~~M~~~~i~~lPVvd~-~~lvGiIt~~Dilre 135 (135)
T cd04621 81 LVAEDIMTEEIITVSPNDDVVDAAKLMLEANISGLPVVDN-DNIVGVITKTDICRE 135 (135)
T ss_pred CCHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEEEC-CEEEEEEEHHHHCCC
T ss_conf 8998938899889989893999999999719988999989-999999985881168