HHsearch alignment for GI: 255764505 and conserved domain: cd04625

>cd04625 CBS_pair_12 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.84  E-value=2e-20  Score=169.06  Aligned_cols=109  Identities=22%  Similarity=0.385  Sum_probs=100.3

Q ss_pred             CCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHC---CCCCCCHHHHCCCCCEEECCCCCHHH
Q ss_conf             543055100238888987410466200000043232324123403567617---82337098834889789779987899
Q gi|255764505|r  228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTV  304 (341)
Q Consensus       228 ~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~l~~---~~~~~~v~~iMt~~p~~I~~d~~i~e  304 (341)
T Consensus         1 ~~V~Tv~pd~~l~eA~~~M~~~~i~~lvV~-~~g~lvGIiT~rDi~~~~~~~~~~~~~~~V~~iMt~~~~tv~~~~~i~~   79 (112)
T cd04625           1 DTIYTVAPETLLSEAVATMAEQDLGSLVVM-ERGELVGLLTFREVLQAMAQHGAGVLDTTVRAIMNPEPIVASPDDSIDE   79 (112)
T ss_pred             CCEEEECCCCCHHHHHHHHHHCCCCEEEEE-ECCEEEEEEEHHHHHHHHHHCCCCCCCCCHHHHEECCCEEECCCCHHHH
T ss_conf             947998995979999999987499879995-7999999998799999999709980117088833489779989996999


Q ss_pred             HHHHHHHCCCCEEEEEECCCEEEEEEEHHHHHHC
Q ss_conf             9999996799589998069848999858889743
Q gi|255764505|r  305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF  338 (341)
Q Consensus       305 Al~lM~~~kI~~LpVVD~~~~lvGiIt~~DLlka  338 (341)
T Consensus        80 a~~~M~~~~i~~lpVvd~-g~lvGiit~~Di~rA  112 (112)
T cd04625          80 VRRLMVERHLRYLPVLDG-GTLLGVISFHDVAKA  112 (112)
T ss_pred             HHHHHHHCCCEEEEEEEC-CEEEEEEEHHHHHCC
T ss_conf             999768669769999999-999999997996359