HHsearch alignment for GI: 255764505 and conserved domain: cd04630
>cd04630 CBS_pair_17 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=98.23 E-value=1.1e-06 Score=68.92 Aligned_cols=55 Identities=22% Similarity=0.298 Sum_probs=50.4
Q ss_pred HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHH
Q ss_conf 3333321047543055100238888987410466200000043232324123403567
Q gi|255764505|r 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275 (341)
Q Consensus 218 l~V~DiM~~~~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~ 275 (341)
T Consensus 60 ~~V~~vMt~--~v~tv~~d~~~~~a~~~m~~~~i~~lpVvd-~~~lvGiit~~Dil~A 114 (114)
T cd04630 60 VNVYEIMTK--PLISVSPDMDIKYCARLMERTNIRRAPVVE-NNELIGIISLTDIFLA 114 (114)
T ss_pred CCHHHHCCC--CEEEECCCCCHHHHHHHHHHCCCCEEEEEE-CCEEEEEEEHHHHHCC
T ss_conf 498682703--549999949499999999977972999999-9999999976896479