HHsearch alignment for GI: 255764505 and conserved domain: cd04631
>cd04631 CBS_pair_18 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.80 E-value=1e-18 Score=156.63 Aligned_cols=110 Identities=34% Similarity=0.440 Sum_probs=100.8
Q ss_pred CCEEEEEHHHHHHHHHHHHCCCCCEEEECCCC-CEEEEEEECCCHHHHHHCC-------------CCCCCHHHHCCCCCE
Q ss_conf 43055100238888987410466200000043-2323241234035676178-------------233709883488978
Q gi|255764505|r 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKD-------------LNTLSVEDVMIKNPK 294 (341)
Q Consensus 229 ~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~-~~liGIITdgDlrR~l~~~-------------~~~~~v~~iMt~~p~ 294 (341)
T Consensus 2 ~vvtv~~~~tl~ea~~~m~~~~v~~~PVvd~~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~v~ 81 (125)
T cd04631 2 DVVTVPPTTPIMEAAKIMVRNGFRRLPVVDEGTGKLVGIITATDILKYLGGGEKFNKIKTGNGLEAINEPVRSIMTRNVI 81 (125)
T ss_pred CCEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCHHHHCCCHHHCCCCHHHHCCCCCE
T ss_conf 97797990949999999998399889999799995999999999999873354310121011023217899995668988
Q ss_pred EECCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHHHHC
Q ss_conf 97799878999999996799589998069848999858889743
Q gi|255764505|r 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338 (341)
Q Consensus 295 ~I~~d~~i~eAl~lM~~~kI~~LpVVD~~~~lvGiIt~~DLlka 338 (341)
T Consensus 82 tv~~~~~l~~a~~~m~~~~i~~lpVvd~~g~~~GiIt~~DilrA 125 (125)
T cd04631 82 TITPDDSIKDAAELMLEKRVGGLPVVDDDGKLVGIVTERDLLKA 125 (125)
T ss_pred EECCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHHHCC
T ss_conf 99799998999999986395099999589939999988997369