HHsearch alignment for GI: 255764505 and conserved domain: cd04631

>cd04631 CBS_pair_18 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.80  E-value=1e-18  Score=156.63  Aligned_cols=110  Identities=34%  Similarity=0.440  Sum_probs=100.8

Q ss_pred             CCEEEEEHHHHHHHHHHHHCCCCCEEEECCCC-CEEEEEEECCCHHHHHHCC-------------CCCCCHHHHCCCCCE
Q ss_conf             43055100238888987410466200000043-2323241234035676178-------------233709883488978
Q gi|255764505|r  229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKD-------------LNTLSVEDVMIKNPK  294 (341)
Q Consensus       229 ~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~-~~liGIITdgDlrR~l~~~-------------~~~~~v~~iMt~~p~  294 (341)
T Consensus         2 ~vvtv~~~~tl~ea~~~m~~~~v~~~PVvd~~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~v~   81 (125)
T cd04631           2 DVVTVPPTTPIMEAAKIMVRNGFRRLPVVDEGTGKLVGIITATDILKYLGGGEKFNKIKTGNGLEAINEPVRSIMTRNVI   81 (125)
T ss_pred             CCEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCHHHHCCCHHHCCCCHHHHCCCCCE
T ss_conf             97797990949999999998399889999799995999999999999873354310121011023217899995668988


Q ss_pred             EECCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHHHHC
Q ss_conf             97799878999999996799589998069848999858889743
Q gi|255764505|r  295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF  338 (341)
Q Consensus       295 ~I~~d~~i~eAl~lM~~~kI~~LpVVD~~~~lvGiIt~~DLlka  338 (341)
T Consensus        82 tv~~~~~l~~a~~~m~~~~i~~lpVvd~~g~~~GiIt~~DilrA  125 (125)
T cd04631          82 TITPDDSIKDAAELMLEKRVGGLPVVDDDGKLVGIVTERDLLKA  125 (125)
T ss_pred             EECCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHHHCC
T ss_conf             99799998999999986395099999589939999988997369