HHsearch alignment for GI: 255764505 and conserved domain: cd04637
>cd04637 CBS_pair_24 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=98.47 E-value=1.3e-07 Score=75.77 Aligned_cols=56 Identities=32% Similarity=0.439 Sum_probs=51.9
Q ss_pred HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHH
Q ss_conf 3333321047543055100238888987410466200000043232324123403567
Q gi|255764505|r 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275 (341)
Q Consensus 218 l~V~DiM~~~~~ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~ 275 (341)
T Consensus 67 ~~v~~iM~~--~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~lvGiIT~~Diik~ 122 (122)
T cd04637 67 RRAHQIMTR--DPITVSPDTPVDEASKLLLENSISCLPVVDENGQLIGIITWKDLLKY 122 (122)
T ss_pred CCHHHHCCC--CCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEEHHHHHCC
T ss_conf 899994638--98399999849999999997493089999689989999996883275