HHsearch alignment for GI: 255764505 and conserved domain: cd04803
>cd04803 CBS_pair_15 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.78 E-value=1.7e-18 Score=154.96 Aligned_cols=108 Identities=30% Similarity=0.416 Sum_probs=99.5
Q ss_pred CEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHC-----------CCCCCCHHHHCCCCCEEECC
Q ss_conf 3055100238888987410466200000043232324123403567617-----------82337098834889789779
Q gi|255764505|r 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-----------DLNTLSVEDVMIKNPKVILE 298 (341)
Q Consensus 230 ip~V~~~~si~eal~~m~~~~~g~v~Vvd~~~~liGIITdgDlrR~l~~-----------~~~~~~v~~iMt~~p~~I~~ 298 (341)
T Consensus 3 vvtv~~~~tl~~a~~~m~~~~i~~lpVvd~~~~lvGiit~~Dil~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~ 82 (122)
T cd04803 3 VVTLSEDDSLADAEELMREHRIRHLPVVNEDGKLVGLLTQRDLLRAALSSLSDNGEESLTKERDVPVAEVMKTDVLTVTP 82 (122)
T ss_pred CEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHCCCCCEEECC
T ss_conf 19998969999999999974997899990898688896599999999843764201210253588999966899869989
Q ss_pred CCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHHHH
Q ss_conf 987899999999679958999806984899985888974
Q gi|255764505|r 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337 (341)
Q Consensus 299 d~~i~eAl~lM~~~kI~~LpVVD~~~~lvGiIt~~DLlk 337 (341)
T Consensus 83 ~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGiiT~~Dilk 121 (122)
T cd04803 83 DTPLREAAEIMVENKIGCLPVVDDKGTLVGIITRSDFLR 121 (122)
T ss_pred CCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHEEE
T ss_conf 998999999998568509999947998999999515564