RPSBLAST alignment for GI: 255764505 and conserved domain: cd04617
>gnl|CDD|73116 cd04617, CBS_pair_4, The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).. Length = 118
Score = 42.5 bits (100), Expect = 2e-04
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 229 SIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSV 285
S P+ V+ + DAI L + G + VVDE L G+++ D+ + DL + V
Sbjct: 1 SPPVVVRENTSVYDAIVTLFLEDVGSLFVVDEDGDLVGVVSRKDLLKASIGGADLQKVPV 60
Query: 286 EDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
+M + P + E+++L A +L+ +H + L VV+ + + ++
Sbjct: 61 GVIMTRMPNITTTTPEESVLEAAKKLI-EHQVDSLPVVEKVDEGLEVI 107