RPSBLAST alignment for GI: 255764505 and conserved domain: cd04636
>gnl|CDD|73134 cd04636, CBS_pair_23, The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).. Length = 132
Score = 51.4 bits (123), Expect = 3e-07
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 23/122 (18%)
Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------------------- 278
L D + IL + V VVD ++ GI++EGD+ R +K
Sbjct: 12 LRDVVEILLTGKISGVPVVDNEGRVVGIVSEGDLIRKIYKGKGLFYVTLLYSVIFLDESK 71
Query: 279 --DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
L VE++M K + EDT + +++ + NI L VVDD K +GI+ D++
Sbjct: 72 IKKLLGKKVEEIMTKKVITVDEDTTIEDVARIMSKKNIKRLPVVDD-GKLVGIISRGDII 130
Query: 337 RF 338
R
Sbjct: 131 RS 132