HHsearch alignment for GI: 255764507 and conserved domain: COG0125
>COG0125 Tmk Thymidylate kinase [Nucleotide transport and metabolism].
Probab=98.39 E-value=1.5e-06 Score=62.37 Aligned_cols=173 Identities=20% Similarity=0.258 Sum_probs=89.6
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCC--EEE---EEEECCC
Q ss_conf 97299998889999899999999748980599821107989985468752223799986653055--244---5456045
Q gi|255764507|r 14 RGMMLIISSPSGVGKSTIARHLLKCDQNFEMSISVTTRVRRPNEVDGKDYYFLSLSRFNELKKAN--AFI---EKAEVHG 88 (222)
Q Consensus 14 r~~iivl~GpsG~GK~tl~~~L~~~~~~~~~~v~~TTR~~R~gE~~G~dY~Fvs~~~F~~~i~~~--~Fl---E~~~~~g 88 (222)
T Consensus 2 ~g~fI~iEGiDGaGKTT~~~~L~~~l~~~g~-~v~~trEP~~~~ig---------e~iR~~ll~~~~~~~~~~e~lLfaa 71 (208)
T COG0125 2 KGMFIVIEGIDGAGKTTQAELLKERLEERGI-KVVLTREPGGTPIG---------EKIRELLLNGEEKLSPKAEALLFAA 71 (208)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCC-EEEEEECCCCCHHH---------HHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 9629999788889889999999999998298-07998689998699---------9999997388667888999999999
Q ss_pred CCEEEECCHHHHHHHCCCCEEECCC------HHH---------HHHHHHCCC---CCHHHHHHHCCCHHHHHHHHHHHCC
Q ss_conf 7334132112232210122030145------234---------455531267---4157898621327999999985201
Q gi|255764507|r 89 NFYGTLRDPIEETISKGKDMLFDID------WQG---------AQNLHKQMG---SNVLSFFILPPTMQELCSRLSLRAK 150 (222)
Q Consensus 89 ~~YGt~~~~i~~~l~~g~~~ildid------~qG---------~~~l~~~~~---~~~~~IFI~pps~e~L~~RL~~R~~ 150 (222)
T Consensus 72 dR~~h~~~~i~pal~~g~vVI~DRy~~Ss~AYQg~~~~~~~~~~~~l~~~~~~~~~PD~ti~Ldv~-~e~al~R~~~r~~ 150 (208)
T COG0125 72 DRAQHLEEVIKPALKEGKVVICDRYVDSSLAYQGGGRGLDLDWVLALNEFAPGGLKPDLTLYLDVP-PEVALERIRKRGE 150 (208)
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECC-HHHHHHHHHHCCC
T ss_conf 999999999788762899999878313788853530599989999999765478999889999488-8999999983277
Q ss_pred C-CCHHHHH--HHHHHHHHHHHHHHHHHCCEEEEC--CCHHHHHHHHHHHHH
Q ss_conf 1-2112899--999999999999876418979994--988999999999999
Q gi|255764507|r 151 K-NQEDKEK--VQLRLQNAYSEIKKWEFYDYVLIN--DDLENSLSILKSVIE 197 (222)
Q Consensus 151 ~-~~d~~e~--i~~Rl~~a~~E~~~~~~fD~vIvN--ddle~a~~~L~~iI~ 197 (222)
T Consensus 151 ~~~r~E~~~~~f~~kvr~~Y~~la~~~~~r~~vIda~~~~e~v~~~i~~~l~ 202 (208)
T COG0125 151 LRDRFEKEDDEFLEKVREGYLELAAKFPERIIVIDASRPLEEVHEEILKILK 202 (208)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 6551566778999999999999986187718999899997999999999999