HHsearch alignment for GI: 255764507 and conserved domain: KOG3347

Probab=97.23  E-value=0.0024  Score=41.82  Aligned_cols=115  Identities=19%  Similarity=0.352  Sum_probs=60.5

Q ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCC-----CCCCCCCCCHHHHHHHHHCCEEEEEEEC
Q ss_conf             47972999988899998999999997489805998211079899854-----6875222379998665305524454560
Q gi|255764507|r   12 NHRGMMLIISSPSGVGKSTIARHLLKCDQNFEMSISVTTRVRRPNEV-----DGKDYYFLSLSRFNELKKANAFIEKAEV   86 (222)
Q Consensus        12 ~~r~~iivl~GpsG~GK~tl~~~L~~~~~~~~~~v~~TTR~~R~gE~-----~G~dY~Fvs~~~F~~~i~~~~FlE~~~~   86 (222)
T Consensus         5 r~~PN-ILvtGTPG~GKstl~~~lae~~-~~~~i--~isd~vkEn~l~~gyDE~y~c~i~DEdkv---------------   65 (176)
T KOG3347           5 RERPN-ILVTGTPGTGKSTLAERLAEKT-GLEYI--EISDLVKENNLYEGYDEEYKCHILDEDKV---------------   65 (176)
T ss_pred             HCCCC-EEEECCCCCCCHHHHHHHHHHH-CCCEE--EHHHHHHHHCCHHCCCCCCCCCCCCHHHH---------------
T ss_conf             13788-7986799988025999999973-98567--45567766110210232236754567899---------------


Q ss_pred             CCCCEEEECCHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             45733413211223221012203014523445553126741578986213279999999852011211289999999
Q gi|255764507|r   87 HGNFYGTLRDPIEETISKGKDMLFDIDWQGAQNLHKQMGSNVLSFFILPPTMQELCSRLSLRAKKNQEDKEKVQLRL  163 (222)
Q Consensus        87 ~g~~YGt~~~~i~~~l~~g~~~ildid~qG~~~l~~~~~~~~~~IFI~pps~e~L~~RL~~R~~~~~d~~e~i~~Rl  163 (222)
T Consensus        66 --------~D~Le~~m~~Gg~-IV--DyHgCd~Fper-wfdlVvV-Lr~~-~s~LY~RL~sRgY----~e~Ki~eNi  124 (176)
T KOG3347          66 --------LDELEPLMIEGGN-IV--DYHGCDFFPER-WFDLVVV-LRTP-NSVLYDRLKSRGY----SEKKIKENI  124 (176)
T ss_pred             --------HHHHHHHHHCCCC-EE--EECCCCCCCHH-HEEEEEE-EECC-CHHHHHHHHHCCC----CHHHHHHHC
T ss_conf             --------9888898756884-88--60056765011-3557999-9468-4599999997588----888876510