HHsearch alignment for GI: 255764507 and conserved domain: PTZ00265
>PTZ00265 multidrug resistance protein (mdr1); Provisional.
Probab=96.58 E-value=0.0024 Score=41.83 Aligned_cols=90 Identities=18% Similarity=0.254 Sum_probs=48.9
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHCCCEE----------------------------E----EEEEE-----------
Q ss_conf 7972999988899998999999997489805----------------------------9----98211-----------
Q gi|255764507|r 13 HRGMMLIISSPSGVGKSTIARHLLKCDQNFE----------------------------M----SISVT----------- 49 (222)
Q Consensus 13 ~r~~iivl~GpsG~GK~tl~~~L~~~~~~~~----------------------------~----~v~~T----------- 49 (222)
T Consensus 1193 ~~GqkVaiVGrSGsGKSTii~lL~Rfyd-i~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1271 (1467)
T PTZ00265 1193 DSKKTTAIVGETGSGKSTFMNLLLRFYD-LKNDHHIIFKNDMTGESSKEQDQQGDEENNLGLKNANEFSNSKEGADAEDS 1271 (1467)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 7998899989999839999999997763-220223221222222222110012221111111222111233333332224
Q ss_pred ECCCCCC--CCCCCCCCCCCHHHHHHH---HHCCEEEEEEECCCCC-EEEECCHHHHHHH
Q ss_conf 0798998--546875222379998665---3055244545604573-3413211223221
Q gi|255764507|r 50 TRVRRPN--EVDGKDYYFLSLSRFNEL---KKANAFIEKAEVHGNF-YGTLRDPIEETIS 103 (222)
Q Consensus 50 TR~~R~g--E~~G~dY~Fvs~~~F~~~---i~~~~FlE~~~~~g~~-YGt~~~~i~~~l~ 103 (222)
T Consensus 1272 ~l~p~sG~I~IDG~DI~~i~L~~LRs~iaiVpQeP~LF~GTIReNI~yg~~d~t~eeI~~ 1331 (1467)
T PTZ00265 1272 TLFKNNGEILLDDIDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDATLEDVKR 1331 (1467)
T ss_pred CCCCCCCEEEECCEECCCCCHHHHHHCCCEECCCCCEECCCHHHHHCCCCCCCCHHHHHH
T ss_conf 568888369989987230799999857857898980227488998088999999999999