HHsearch alignment for GI: 255764507 and conserved domain: TIGR00041
>TIGR00041 DTMP_kinase thymidylate kinase; InterPro: IPR000062 Thymidylate kinase (2.7.4.9 from EC; dTMP kinase) catalyzes the phosphorylation of thymidine 5'-monophosphate (dTMP) to form thymidine 5'-diphosphate (dTDP) in the presence of ATP and magnesium: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate Thymidylate kinase is an ubiquitous enzyme of about 25 Kd and is important in the dTTP synthesis pathway for DNA synthesis. The function of dTMP kinase in eukaryotes comes from the study of a cell cycle mutant, cdc8, in Saccharomyces cerevisiae Saccharomyces cerevisiae. Structural and functional analyses suggest that the cDNA codes for authentic human dTMP kinase. The mRNA levels and enzyme activities corresponded to cell cycle progression and cell growth stages. ; GO: 0004798 thymidylate kinase activity, 0005524 ATP binding, 0006233 dTDP biosynthetic process, 0006235 dTTP biosynthetic process.
Probab=97.51 E-value=0.00049 Score=46.26 Aligned_cols=133 Identities=22% Similarity=0.251 Sum_probs=74.0
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCC-EEEEEEEEECCCCCCCCCCC--CCCC-CCHHHHHHHH-HCCEEEEEEECCCC
Q ss_conf 729999888999989999999974898-05998211079899854687--5222-3799986653-05524454560457
Q gi|255764507|r 15 GMMLIISSPSGVGKSTIARHLLKCDQN-FEMSISVTTRVRRPNEVDGK--DYYF-LSLSRFNELK-KANAFIEKAEVHGN 89 (222)
Q Consensus 15 ~~iivl~GpsG~GK~tl~~~L~~~~~~-~~~~v~~TTR~~R~gE~~G~--dY~F-vs~~~F~~~i-~~~~FlE~~~~~g~ 89 (222)
T Consensus 2 ~~fiviEGiDGaGKTT~~~~l~~~l~~l~g~~~-~~t~EPg~t~~ge~IR~~l~D~l~~~~~~~~~~~~alLFaAdR~~H 80 (211)
T TIGR00041 2 GMFIVIEGIDGAGKTTQLNLLKKLLKELEGYKV-LFTREPGGTPIGEKIRELLQDLLNENEEPLTDKTEALLFAADRHDH 80 (211)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEE-EEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 745888511587589999999999775138347-8871899987899999999987414666335999999999858999
Q ss_pred CEEEECCHHHHHHHCCCCEEEC---------------CCHHHHHHHHHCCCC---CHHHHHHHCCCHHHHHHHHHHHCC
Q ss_conf 3341321122322101220301---------------452344555312674---157898621327999999985201
Q gi|255764507|r 90 FYGTLRDPIEETISKGKDMLFD---------------IDWQGAQNLHKQMGS---NVLSFFILPPTMQELCSRLSLRAK 150 (222)
Q Consensus 90 ~YGt~~~~i~~~l~~g~~~ild---------------id~qG~~~l~~~~~~---~~~~IFI~pps~e~L~~RL~~R~~ 150 (222)
T Consensus 81 L~~~-~~~ik~al~~~~~Vi~DRy~~Ss~AYQg~~~~~d~~~~~~lN~~~~~~~~Pd~t~~Ld~-d~e~al~R~~~~g~ 157 (211)
T TIGR00041 81 LEHV-EEKIKPALAQGKLVISDRYLFSSIAYQGLARGIDIDLVLELNEDALGDMKPDLTILLDI-DPEVALERLRKRGE 157 (211)
T ss_pred HHHH-HHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEE-CHHHHHHHHHCCCC
T ss_conf 9978-98778898669679984112435777542256888899999775211358666898860-73779887520472