>TIGR00390 hslU heat shock protein HslVU, ATPase subunit HslU; InterPro: IPR004491 This family of proteins represent HslU, a bacterial clpX homolog, which is an ATPase and chaperone belonging to the AAA Clp/Hsp100 family and a component of the eubacterial proteasome. ATP-dependent protease complexes are present in all three kingdoms of life, where they rid the cell of misfolded or damaged proteins and control the level of certain regulatory proteins. They include the proteasome in Eukaryotes, Archaea, and Actinomycetales and the HslVU (ClpQY, ClpXP) complex in other eubacteria. Genes homologous to eubacterial HslV, IPR001353 from INTERPRO, (ClpQ,) and HslU (ClpY, ClpX) have also been demonstrated in to be present in the genome of trypanosomatid protozoa. They are expressed as precursors, with a propeptide that is removed to produce the active protease. The protease is probably located in the kinetoplast (mitochondrion). Phylogenetic analysis shows that HslV and HslU from trypanosomatids form a single clad with other eubacterial homologs . ; GO: 0005515 protein binding, 0005524 ATP binding, 0009377 HslUV protease activity, 0016887 ATPase activity, 0005737 cytoplasm, 0009376 HslUV protease complex.

Probab=96.57  E-value=0.0019  Score=42.41  Aligned_cols=30  Identities=37%  Similarity=0.540  Sum_probs=23.3

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHHHCCCEEEE
Q ss_conf             7299998889999899999999748980599
Q gi|255764507|r   15 GMMLIISSPSGVGKSTIARHLLKCDQNFEMS   45 (222)
Q Consensus        15 ~~iivl~GpsG~GK~tl~~~L~~~~~~~~~~   45 (222)
T Consensus        47 PKNILMiGpTGVGKTEIARRlAKL~-~aPFi   76 (463)
T TIGR00390        47 PKNILMIGPTGVGKTEIARRLAKLA-NAPFI   76 (463)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHHH-CCCCE
T ss_conf             7430432788985447999999984-48914