HHsearch alignment for GI: 255764507 and conserved domain: TIGR03375
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=96.90 E-value=0.0018 Score=42.56 Aligned_cols=51 Identities=25% Similarity=0.250 Sum_probs=37.1
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCC--CCCCCCCCCCCHHHHHHHH
Q ss_conf 79729999888999989999999974898059982110798998--5468752223799986653
Q gi|255764507|r 13 HRGMMLIISSPSGVGKSTIARHLLKCDQNFEMSISVTTRVRRPN--EVDGKDYYFLSLSRFNELK 75 (222)
Q Consensus 13 ~r~~iivl~GpsG~GK~tl~~~L~~~~~~~~~~v~~TTR~~R~g--E~~G~dY~Fvs~~~F~~~i 75 (222)
T Consensus 489 ~~Ge~vaIvG~sGsGKSTL~kll~Gl~~------------p~~G~i~idg~~~~~~~~~~~r~~i 541 (694)
T TIGR03375 489 RPGEKVAIIGRIGSGKSTLLKLLLGLYQ------------PTEGSVLLDGVDIRQIDPADLRRNI 541 (694)
T ss_pred CCCCEEEEEECCCCCHHHHHHHHCCCCC------------CCCCEEEECCEECCCCCHHHHHHHC
T ss_conf 7997899980589878899998556758------------9988799898542549999997302