HHsearch alignment for GI: 255764507 and conserved domain: cd00267
>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.67 E-value=0.0019 Score=42.48 Aligned_cols=28 Identities=29% Similarity=0.434 Sum_probs=23.3
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHC
Q ss_conf 4797299998889999899999999748
Q gi|255764507|r 12 NHRGMMLIISSPSGVGKSTIARHLLKCD 39 (222)
Q Consensus 12 ~~r~~iivl~GpsG~GK~tl~~~L~~~~ 39 (222)
T Consensus 22 i~~Ge~~~i~G~nGaGKSTLl~~l~gl~ 49 (157)
T cd00267 22 LKAGEIVALVGPNGSGKSTLLRAIAGLL 49 (157)
T ss_pred ECCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 8799799998788999899999995884