HHsearch alignment for GI: 255764507 and conserved domain: cd01878
>cd01878 HflX HflX subfamily. A distinct conserved domain with a glycine-rich segment N-terminal of the GTPase domain characterizes the HflX subfamily. The E. coli HflX has been implicated in the control of the lambda cII repressor proteolysis, but the actual biological functions of these GTPases remain unclear. HflX is widespread, but not universally represented in all three superkingdoms.
Probab=96.43 E-value=0.0035 Score=40.79 Aligned_cols=54 Identities=19% Similarity=0.279 Sum_probs=34.6
Q ss_pred CCE-EEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCC---CCCCCCCCCH
Q ss_conf 972-999988899998999999997489805998211079899854---6875222379
Q gi|255764507|r 14 RGM-MLIISSPSGVGKSTIARHLLKCDQNFEMSISVTTRVRRPNEV---DGKDYYFLSL 68 (222)
Q Consensus 14 r~~-iivl~GpsG~GK~tl~~~L~~~~~~~~~~v~~TTR~~R~gE~---~G~dY~Fvs~ 68 (222)
T Consensus 39 ~g~p~VaivG~PNvGKSTLlN~L~g~~~-~v~~~~~tT~d~~~~~i~~~~~~~i~l~DT 96 (204)
T cd01878 39 SGIPTVALVGYTNAGKSTLFNALTGADV-YAEDQLFATLDPTTRRLRLPDGREVLLTDT 96 (204)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCC-EEECCCCCCCCCEEEEEEECCCCEEEEEEC
T ss_conf 5998799988999989999999948996-341567764576366899569977999836