HHsearch alignment for GI: 255764507 and conserved domain: cd02026
>cd02026 PRK Phosphoribulokinase (PRK) is an enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes. This enzyme catalyzes the phosphorylation of D-ribulose 5-phosphate to form D-ribulose 1, 5-biphosphate, using ATP and NADPH produced by the primary reactions of photosynthesis.
Probab=97.71 E-value=0.00027 Score=47.89 Aligned_cols=138 Identities=20% Similarity=0.267 Sum_probs=63.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCC-CEEEEEEEE-----ECCCCCCCCCCCCCCCCCHHHHHHH------HHCCEEEEEE
Q ss_conf 999988899998999999997489-805998211-----0798998546875222379998665------3055244545
Q gi|255764507|r 17 MLIISSPSGVGKSTIARHLLKCDQ-NFEMSISVT-----TRVRRPNEVDGKDYYFLSLSRFNEL------KKANAFIEKA 84 (222)
Q Consensus 17 iivl~GpsG~GK~tl~~~L~~~~~-~~~~~v~~T-----TR~~R~gE~~G~dY~Fvs~~~F~~~------i~~~~FlE~~ 84 (222)
T Consensus 1 IIgVaG~SGSGKTTv~~~i~~ifg~~~v~vI~~D~Yhr~dr~~r~--~~~~t~~~P~And~dll~~~l~~Lk~Gk~i~~- 77 (273)
T cd02026 1 IIGVAGDSGCGKSTFLRRLTSLFGSDLVTVICLDDYHSLDRKGRK--ETGITALDPRANNFDLMYEQLKALKEGQAIEK- 77 (273)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHH--HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-
T ss_conf 989978887869999999999858487699965777889989998--71877689752349999999999985995343-
Q ss_pred ECCCCCEEEECCHHHHHHHCCCCEEECCCHHHHH-----HHHHCCCCCHHHHHHHCCCHHHHHHHHH----HHCCCCCHH
Q ss_conf 6045733413211223221012203014523445-----5531267415789862132799999998----520112112
Q gi|255764507|r 85 EVHGNFYGTLRDPIEETISKGKDMLFDIDWQGAQ-----NLHKQMGSNVLSFFILPPTMQELCSRLS----LRAKKNQED 155 (222)
Q Consensus 85 ~~~g~~YGt~~~~i~~~l~~g~~~ildid~qG~~-----~l~~~~~~~~~~IFI~pps~e~L~~RL~----~R~~~~~d~ 155 (222)
T Consensus 78 PvYdh~tg~~-~~~e~-i~p~diII~E----GLh~l~~~~lrdl~--D-LkIfVD~d~dlr~~rKI~RD~~ERGyS~E~V 148 (273)
T cd02026 78 PIYNHVTGLI-DPPEL-IKPTKIVVIE----GLHPLYDERVRELL--D-FSVYLDISDEVKFAWKIQRDMAERGHSLEDV 148 (273)
T ss_pred CCCCCCCCCC-CCCEE-ECCCCEEEEE----CEECCCCHHHHHHH--C-EEEEECCCHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 2221458965-77565-0687479992----20002668898660--7-4688568764799998776676648899999
Q ss_pred HHHHHHHHHHH
Q ss_conf 89999999999
Q gi|255764507|r 156 KEKVQLRLQNA 166 (222)
Q Consensus 156 ~e~i~~Rl~~a 166 (222)
T Consensus 149 ~~~I~rR~pDy 159 (273)
T cd02026 149 LASIEARKPDF 159 (273)
T ss_pred HHHHHHHHHHH
T ss_conf 99998604788