HHsearch alignment for GI: 255764507 and conserved domain: cd03219
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=96.41 E-value=0.0035 Score=40.81 Aligned_cols=26 Identities=23% Similarity=0.349 Sum_probs=22.8
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 47972999988899998999999997
Q gi|255764507|r 12 NHRGMMLIISSPSGVGKSTIARHLLK 37 (222)
Q Consensus 12 ~~r~~iivl~GpsG~GK~tl~~~L~~ 37 (222)
T Consensus 23 i~~Gei~gliG~nGaGKSTL~~~i~G 48 (236)
T cd03219 23 VRPGEIHGLIGPNGAGKTTLFNLISG 48 (236)
T ss_pred ECCCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 88998999998999739999999967