>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.

Probab=96.30  E-value=0.0041  Score=40.34  Aligned_cols=26  Identities=35%  Similarity=0.417  Sum_probs=22.3

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             79729999888999989999999974
Q gi|255764507|r   13 HRGMMLIISSPSGVGKSTIARHLLKC   38 (222)
Q Consensus        13 ~r~~iivl~GpsG~GK~tl~~~L~~~   38 (222)
T Consensus        46 ~~GeivgilG~NGaGKSTLl~~i~Gl   71 (224)
T cd03220          46 PRGERIGLIGRNGAGKSTLLRLLAGI   71 (224)
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf             38989999979998199999999758