>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=96.88  E-value=0.0011  Score=44.02  Aligned_cols=28  Identities=32%  Similarity=0.470  Sum_probs=24.1

Q ss_pred             CCCCCCEEEEEECCCCCCHHHHHHHHHH
Q ss_conf             8347972999988899998999999997
Q gi|255764507|r   10 TVNHRGMMLIISSPSGVGKSTIARHLLK   37 (222)
Q Consensus        10 ~~~~r~~iivl~GpsG~GK~tl~~~L~~   37 (222)
T Consensus        20 ~~v~~GEiv~ilGpNGaGKSTllk~i~G   47 (177)
T cd03222          20 GVVKEGEVIGIVGPNGTGKTTAVKILAG   47 (177)
T ss_pred             CCCCCCCEEEEECCCCCCHHHHHHHHHC
T ss_conf             9558998999989999999999999968