HHsearch alignment for GI: 255764507 and conserved domain: cd03223
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=96.80 E-value=0.0016 Score=42.87 Aligned_cols=27 Identities=41% Similarity=0.539 Sum_probs=22.6
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHC
Q ss_conf 797299998889999899999999748
Q gi|255764507|r 13 HRGMMLIISSPSGVGKSTIARHLLKCD 39 (222)
Q Consensus 13 ~r~~iivl~GpsG~GK~tl~~~L~~~~ 39 (222)
T Consensus 25 ~~Ge~v~i~G~sGsGKSTLl~~l~Gl~ 51 (166)
T cd03223 25 KPGDRLLITGPSGTGKSSLFRALAGLW 51 (166)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHCCCC
T ss_conf 899999999589998899999986987