HHsearch alignment for GI: 255764507 and conserved domain: cd03240

>cd03240 ABC_Rad50 The catalytic domains of Rad50 are similar to the ATP-binding cassette of ABC transporters, but are not associated with membrane-spanning domains. The conserved ATP-binding motifs common to Rad50 and the ABC transporter family include the Walker A and Walker B motifs, the Q loop, a histidine residue in the switch region, a D-loop, and a conserved LSGG sequence. This conserved sequence, LSGG, is the most specific and characteristic motif of this family and is thus known as the ABC signature sequence.
Probab=96.71  E-value=0.0016  Score=43.02  Aligned_cols=24  Identities=29%  Similarity=0.367  Sum_probs=20.3

Q ss_pred             CCEEEEEECCCCCCHHHHHHHHHH
Q ss_conf             972999988899998999999997
Q gi|255764507|r   14 RGMMLIISSPSGVGKSTIARHLLK   37 (222)
Q Consensus        14 r~~iivl~GpsG~GK~tl~~~L~~   37 (222)
T Consensus        21 ~~~itaivG~NGaGKSTLl~~i~~   44 (204)
T cd03240          21 FSPLTLIVGQNGAGKTTIIEALKY   44 (204)
T ss_pred             ECCEEEEECCCCCCHHHHHHHHHH
T ss_conf             088899998999999999999863