HHsearch alignment for GI: 255764507 and conserved domain: cd03259
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.70 E-value=0.0017 Score=42.83 Aligned_cols=27 Identities=33% Similarity=0.512 Sum_probs=23.0
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 479729999888999989999999974
Q gi|255764507|r 12 NHRGMMLIISSPSGVGKSTIARHLLKC 38 (222)
Q Consensus 12 ~~r~~iivl~GpsG~GK~tl~~~L~~~ 38 (222)
T Consensus 23 i~~Gei~~iiGpnGaGKSTl~~~i~Gl 49 (213)
T cd03259 23 VEPGEFLALLGPSGCGKTTLLRLIAGL 49 (213)
T ss_pred ECCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf 889989999999997399999999759