HHsearch results for GI: 255764508 and protein with PDBid: 3ca8_A

>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genomics, structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli K12}
Probab=99.93  E-value=5.6e-25  Score=180.85  Aligned_cols=114  Identities=20%  Similarity=0.305  Sum_probs=98.9

Q ss_pred             CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCC-----------------
Q ss_conf             545687589996252137777655543468205899999999998252005753389706888-----------------
Q gi|255764508|r   61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-----------------  123 (242)
Q Consensus        61 ~~~~~~d~IVVLGgG~~~~~~~~~~~~~~~~~~~~Rl~~a~~L~~~~~~~~~~~~ii~SGg~~-----------------  123 (242)
                      ..+.++|+||||||+.                 ..|...|++||+++.+     ++++|||.+                 
T Consensus        32 ~~p~~aD~IVvlG~~~-----------------l~~~~~A~~L~~~g~a-----~liisGG~G~~T~~l~~~i~~~~~~~   89 (266)
T 3ca8_A           32 EVPYQADCVILAGNAV-----------------MPTIDAACKIARDQQI-----PLLISGGIGHSTTFLYSAIAQHPHYN   89 (266)
T ss_dssp             TCCCCCSEEEEESCCC-----------------HHHHHHHHHHHHHHTC-----CEEEECCSSTTHHHHHHHHHTCTTGG
T ss_pred             CCCCCCCEEEECCCCC-----------------HHHHHHHHHHHHCCCC-----CEEEECCCCCCCHHHHHHHHCCCCCC
T ss_conf             7888999899889982-----------------1899999999980599-----88973698755314565543065445


Q ss_pred             --CCCCCCHHHHHHHHHHHC-CCCHHHHHCCHHHHHHHHHHHHHHHHHHHCC--CCCEEEECCHHHHHHHHHHHHHCC
Q ss_conf             --877888279999999974-9998781111014665777999999976236--864088534588999999999769
Q gi|255764508|r  124 --QKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFG  196 (242)
Q Consensus       124 --~~~~~~Ea~~m~~~l~~~-Gv~~~~I~~e~~s~nT~ena~~~~~il~~~~--~~~vilVTsa~Hm~RA~~~f~~~g  196 (242)
                        ...+.+||+.|++++.+. |||+++|++|++|+||.|||.++++++++++  +++++||||+|||+||.+.|+++-
T Consensus        90 ~i~~~g~sEAe~~a~~a~~~~GVp~~~Il~E~~S~NT~eNa~~s~~lL~~~~~~~~siilV~~p~h~rRa~atf~k~~  167 (266)
T 3ca8_A           90 TIRTTGRAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQDPTMQRRTMATFRRMT  167 (266)
T ss_dssp             GSCCTTSCHHHHHHHHHHHTTCCCGGGEEEECCCCSHHHHHHHHHHHHHTCSSCCSCEEEECCTTTHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHCCCCHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHC
T ss_conf             567789889999999999974999999664677777899999999999963999877999898899999999999974