HHsearch results for GI: 255764508 and protein with PDBid: 3ca8_A
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genomics, structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli K12}
Probab=99.93 E-value=5.6e-25 Score=180.85 Aligned_cols=114 Identities=20% Similarity=0.305 Sum_probs=98.9
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCC-----------------
Q ss_conf 545687589996252137777655543468205899999999998252005753389706888-----------------
Q gi|255764508|r 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP----------------- 123 (242)
Q Consensus 61 ~~~~~~d~IVVLGgG~~~~~~~~~~~~~~~~~~~~Rl~~a~~L~~~~~~~~~~~~ii~SGg~~----------------- 123 (242)
..+.++|+||||||+. ..|...|++||+++.+ ++++|||.+
T Consensus 32 ~~p~~aD~IVvlG~~~-----------------l~~~~~A~~L~~~g~a-----~liisGG~G~~T~~l~~~i~~~~~~~ 89 (266)
T 3ca8_A 32 EVPYQADCVILAGNAV-----------------MPTIDAACKIARDQQI-----PLLISGGIGHSTTFLYSAIAQHPHYN 89 (266)
T ss_dssp TCCCCCSEEEEESCCC-----------------HHHHHHHHHHHHHHTC-----CEEEECCSSTTHHHHHHHHHTCTTGG
T ss_pred CCCCCCCEEEECCCCC-----------------HHHHHHHHHHHHCCCC-----CEEEECCCCCCCHHHHHHHHCCCCCC
T ss_conf 7888999899889982-----------------1899999999980599-----88973698755314565543065445
Q ss_pred --CCCCCCHHHHHHHHHHHC-CCCHHHHHCCHHHHHHHHHHHHHHHHHHHCC--CCCEEEECCHHHHHHHHHHHHHCC
Q ss_conf --877888279999999974-9998781111014665777999999976236--864088534588999999999769
Q gi|255764508|r 124 --QKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFG 196 (242)
Q Consensus 124 --~~~~~~Ea~~m~~~l~~~-Gv~~~~I~~e~~s~nT~ena~~~~~il~~~~--~~~vilVTsa~Hm~RA~~~f~~~g 196 (242)
...+.+||+.|++++.+. |||+++|++|++|+||.|||.++++++++++ +++++||||+|||+||.+.|+++-
T Consensus 90 ~i~~~g~sEAe~~a~~a~~~~GVp~~~Il~E~~S~NT~eNa~~s~~lL~~~~~~~~siilV~~p~h~rRa~atf~k~~ 167 (266)
T 3ca8_A 90 TIRTTGRAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQDPTMQRRTMATFRRMT 167 (266)
T ss_dssp GSCCTTSCHHHHHHHHHHHTTCCCGGGEEEECCCCSHHHHHHHHHHHHHTCSSCCSCEEEECCTTTHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHC
T ss_conf 567789889999999999974999999664677777899999999999963999877999898899999999999974