BLAST/PSIBLAST alignment of GI: 255764508 and GI: 33599364 at iteration 1
>gi|33599364|ref|NP_886924.1| hypothetical protein BB0375 [Bordetella bronchiseptica RB50] Length = 251
>gi|33566960|emb|CAE30873.1| putative exported protein [Bordetella bronchiseptica RB50] Length = 251
 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 93/223 (41%), Positives = 136/223 (60%), Gaps = 10/223 (4%)

Query: 13  WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVL 71
           W    ++ R ++ +S  ++LF  +G G I   LL  LQ  YQ +P ++  W +  N IVL
Sbjct: 18  WRQWRRASRMLYGLS--LVLFLALGCGPIAAWLLDGLQSDYQAKPPIA--WGQR-NAIVL 72

Query: 72  LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
           LG GT       A RIEP   SY+RI E  R Y  C++ +  C +I+SGGD   HG AE+
Sbjct: 73  LGAGTEQA----AGRIEPGIFSYARIVEAARRYHDCRKAAAQCKLIVSGGDAAYHGDAEA 128

Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
            VY + L+  GV+  D+  E  S++T+QNAQF+S++++      ++LVSS  HLKRS LY
Sbjct: 129 NVYRDPLVALGVDAADVLPEPGSMNTWQNAQFTSAVLRRYDADRVVLVSSGIHLKRSALY 188

Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
           F HFG+      +DYL+A +S++PLS NF + + AL EY+GI+
Sbjct: 189 FAHFGVAATPVRADYLHARWSVVPLSYNFAVADFALHEYLGIV 231