BLAST/PSIBLAST alignment of GI: 255764508 and GI: 33599364 at iteration 1
>gi|33599364|ref|NP_886924.1| hypothetical protein BB0375 [Bordetella bronchiseptica RB50] Length = 251
>gi|33566960|emb|CAE30873.1| putative exported protein [Bordetella bronchiseptica RB50] Length = 251
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 136/223 (60%), Gaps = 10/223 (4%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVL 71
W ++ R ++ +S ++LF +G G I LL LQ YQ +P ++ W + N IVL
Sbjct: 18 WRQWRRASRMLYGLS--LVLFLALGCGPIAAWLLDGLQSDYQAKPPIA--WGQR-NAIVL 72
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG GT A RIEP SY+RI E R Y C++ + C +I+SGGD HG AE+
Sbjct: 73 LGAGTEQA----AGRIEPGIFSYARIVEAARRYHDCRKAAAQCKLIVSGGDAAYHGDAEA 128
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
VY + L+ GV+ D+ E S++T+QNAQF+S++++ ++LVSS HLKRS LY
Sbjct: 129 NVYRDPLVALGVDAADVLPEPGSMNTWQNAQFTSAVLRRYDADRVVLVSSGIHLKRSALY 188
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
F HFG+ +DYL+A +S++PLS NF + + AL EY+GI+
Sbjct: 189 FAHFGVAATPVRADYLHARWSVVPLSYNFAVADFALHEYLGIV 231