BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|255764508|ref|YP_003065363.2| hypothetical protein
CLIBASIA_04245 [Candidatus Liberibacter asiaticus str. psy62]
(242 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|255764508|ref|YP_003065363.2| hypothetical protein CLIBASIA_04245 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254547859|gb|ACT57423.2| hypothetical protein CLIBASIA_04245 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 242
Score = 498 bits (1281), Expect = e-139, Method: Compositional matrix adjust.
Identities = 242/242 (100%), Positives = 242/242 (100%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP
Sbjct: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG
Sbjct: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS
Sbjct: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG
Sbjct: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
Query: 241 NR 242
NR
Sbjct: 241 NR 242
>gi|33599364|ref|NP_886924.1| hypothetical protein BB0375 [Bordetella bronchiseptica RB50]
gi|33566960|emb|CAE30873.1| putative exported protein [Bordetella bronchiseptica RB50]
Length = 251
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 136/223 (60%), Gaps = 10/223 (4%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVL 71
W ++ R ++ +S ++LF +G G I LL LQ YQ +P ++ W + N IVL
Sbjct: 18 WRQWRRASRMLYGLS--LVLFLALGCGPIAAWLLDGLQSDYQAKPPIA--WGQR-NAIVL 72
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG GT A RIEP SY+RI E R Y C++ + C +I+SGGD HG AE+
Sbjct: 73 LGAGTEQA----AGRIEPGIFSYARIVEAARRYHDCRKAAAQCKLIVSGGDAAYHGDAEA 128
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
VY + L+ GV+ D+ E S++T+QNAQF+S++++ ++LVSS HLKRS LY
Sbjct: 129 NVYRDPLVALGVDAADVLPEPGSMNTWQNAQFTSAVLRRYDADRVVLVSSGIHLKRSALY 188
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
F HFG+ +DYL+A +S++PLS NF + + AL EY+GI+
Sbjct: 189 FAHFGVAATPVRADYLHARWSVVPLSYNFAVADFALHEYLGIV 231
>gi|33595083|ref|NP_882726.1| hypothetical protein BPP0372 [Bordetella parapertussis 12822]
gi|33565160|emb|CAE35956.1| putative exported protein [Bordetella parapertussis]
Length = 251
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 134/223 (60%), Gaps = 10/223 (4%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVL 71
W ++ R ++ +S ++LF +G G I LL LQ YQ +P ++ W + N IVL
Sbjct: 18 WRQWRRASRMLYGLS--LVLFLALGCGPIAAWLLDGLQSDYQAKPPIA--WGQR-NAIVL 72
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG GT A RIEP SY+RI E R Y C++ + C +I SGGD HG AE+
Sbjct: 73 LGAGTEQA----AGRIEPGIFSYARIVEAARRYHDCRKAAAQCKLIASGGDAAYHGDAEA 128
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
VY + L+ GV+ D+ E S++T+QNAQF+S++++ ++LVSS HLKRS LY
Sbjct: 129 NVYRDPLVALGVDAADVLPEPGSMNTWQNAQFTSAVLRRYDADRVVLVSSGIHLKRSALY 188
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
F +FG+ +DYL+A S++PLS NF + + AL EY+GI+
Sbjct: 189 FAYFGVAATPVRADYLHARRSVVPLSYNFAVADFALHEYLGIV 231
>gi|148975915|ref|ZP_01812704.1| hypothetical protein VSWAT3_06376 [Vibrionales bacterium SWAT-3]
gi|145964660|gb|EDK29913.1| hypothetical protein VSWAT3_06376 [Vibrionales bacterium SWAT-3]
Length = 253
Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 122/200 (61%), Gaps = 4/200 (2%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
F IG G IP LL LQ +Y+ + QW D N IVLLG GT +I + EP+F
Sbjct: 36 FVLIGSGFIPRYLLDDLQANYESKSEN-QWS-DNNAIVLLGAGTQLIKSTQ--EFEPAFF 91
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
SY RI ET YK C + C +IISGGD Q +G+ E+ +Y +LL GV + DI E
Sbjct: 92 SYGRISETASQYKDCAKSDTKCKVIISGGDAQGNGVTEAEIYEQQLLRLGVPKADIIQEP 151
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
S++T++NAQ +S ++K+ Q NIILVSS H++RS+LYF HFG+ SDY+ A S
Sbjct: 152 NSVNTWKNAQLTSDLMKHHQFDNIILVSSGLHIRRSELYFNHFGLEVIPVRSDYMAAQIS 211
Query: 213 IIPLSANFYLTELALKEYIG 232
+PL NF +T+ AL E IG
Sbjct: 212 WLPLWYNFAVTDFALHEQIG 231
>gi|218709695|ref|YP_002417316.1| hypothetical protein VS_1706 [Vibrio splendidus LGP32]
gi|218322714|emb|CAV18890.1| conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 253
Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 127/202 (62%), Gaps = 6/202 (2%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQR-PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
LF IG G+IP LL LQ +Y+R P + QW N IVLLG GT +I + EP+
Sbjct: 35 LFVLIGSGLIPRYLLNDLQANYERKPDI--QWTSH-NAIVLLGAGTQLIASTQ--EFEPT 89
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
F S+ RI ET YK+C + C +I+SGGD Q +G+ E+ VY +LL GV R DI
Sbjct: 90 FFSFGRINETASQYKNCAKAQTICKVIVSGGDAQNNGVTEAEVYQQQLLRLGVPRADIIQ 149
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E S++T++NAQ +S ++K+ Q NI+LVSS H++RS+LYF HFG+N +DY+ A
Sbjct: 150 EPNSVNTWKNAQLTSDLMKHHQFDNIVLVSSGLHIRRSELYFNHFGLNVIPLRADYMAAQ 209
Query: 211 YSIIPLSANFYLTELALKEYIG 232
S +PL NF +T+ AL E +G
Sbjct: 210 ISWLPLWYNFAVTDFALHEQLG 231
>gi|149909508|ref|ZP_01898162.1| hypothetical protein PE36_16920 [Moritella sp. PE36]
gi|149807413|gb|EDM67364.1| hypothetical protein PE36_16920 [Moritella sp. PE36]
Length = 257
Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 127/222 (57%), Gaps = 18/222 (8%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY--QRPLLSPQWKKDGNIIVLL 72
LLC +I LL I G+IP LL LQ Y Q P+ W+ D N I+LL
Sbjct: 28 LLCSTI----------LLTVLISIGVIPKYLLDKLQQDYVAQAPI---HWQ-DNNAIILL 73
Query: 73 GNG-TTIIPTIPAIR-IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
G G + TI + IEP F ++SRI+ RLY C C II+SGGD QK G E
Sbjct: 74 GAGLEKVGDTINNVDSIEPPFHAFSRIYAAARLYNECIGTEQQCKIIVSGGDTQKLGDTE 133
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ VY N+L+ G+ DI E SL+T+QNAQF+S ++ N +L+SS H+KRSQL
Sbjct: 134 AAVYKNRLVSIGINAADIITEPNSLNTWQNAQFTSDILSKGDFDNSVLISSGLHIKRSQL 193
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
YF+HFG+ +DY++A S IPL NF LT+ AL E+IG
Sbjct: 194 YFEHFGVRATPIRADYMSATVSFIPLGYNFALTDFALHEWIG 235
>gi|84387309|ref|ZP_00990329.1| hypothetical protein V12B01_04678 [Vibrio splendidus 12B01]
gi|84377758|gb|EAP94621.1| hypothetical protein V12B01_04678 [Vibrio splendidus 12B01]
Length = 253
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/224 (41%), Positives = 131/224 (58%), Gaps = 6/224 (2%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNI 68
V + LL +F + F IG G+IP LL LQ Y+ +P + QW D N
Sbjct: 13 VGFTRLLQWRKTSLFLSLVLISSFVLIGSGLIPRYLLNDLQADYESKPDI--QWS-DNNA 69
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IVLLG GT +I + EP+F S+ RI ET YK C + C +IISGGD Q +G+
Sbjct: 70 IVLLGAGTQLIKSTQ--EFEPAFFSFGRISETASQYKDCAKAQTTCKVIISGGDAQNNGV 127
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ +Y +LL V DDI E S++T++NAQ +S ++K+ + NI+LVSS H++RS
Sbjct: 128 TEAEIYQQQLLRLDVPMDDIIQEPNSVNTWKNAQLTSDLMKHHKFDNIVLVSSGLHIRRS 187
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+LYF HFG+N +DY+ A S +PL NF +T+ AL E IG
Sbjct: 188 ELYFNHFGLNVIPVRADYMAAQISWLPLWYNFAVTDFALHEQIG 231
>gi|21242461|ref|NP_642043.1| hypothetical protein XAC1712 [Xanthomonas axonopodis pv. citri str.
306]
gi|21107907|gb|AAM36579.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 253
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 133/212 (62%), Gaps = 5/212 (2%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
++ ++ +L+F+ +G G +P+ +L+HLQ + + W N+IVLLG GT + P
Sbjct: 26 RVLGLASLLLVFA-VGCGPLPSWMLQHLQRTGVNDFNA--WGAR-NVIVLLGAGT-VRPE 80
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
E + +Y RI E+ RLY C+ C I ISGGD + GL+E++VY LL
Sbjct: 81 GRDAVAEANLFAYGRIVESARLYWQCRHSGGDCKIEISGGDARGLGLSEAVVYQRVLLGL 140
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ R D+ +E S++T+QNAQFS ++++ + I LVSSA HL+R++LYF+HFGI+
Sbjct: 141 GIPRADLIMEPSSMNTWQNAQFSQPLLRDYRPDRIALVSSATHLRRAELYFRHFGIDATP 200
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 201 VRADWLTATWSILPQSYNFTLADVALHEYLGI 232
>gi|294626655|ref|ZP_06705252.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294665846|ref|ZP_06731114.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292599075|gb|EFF43215.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292604356|gb|EFF47739.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 252
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 133/212 (62%), Gaps = 5/212 (2%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
++ ++ +L+F+ +G G +P+ +L+HLQ + + W N+IVLLG GT + P
Sbjct: 25 RVLGLASLLLVFA-VGCGPLPSWMLQHLQRTGVNDFNA--WGAR-NVIVLLGAGT-VRPE 79
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
E + +Y RI E+ RLY C+ C I ISGGD + GL+E++VY LL
Sbjct: 80 GRDAVAEANLFAYGRIVESARLYWQCRHSGGDCKIEISGGDARGLGLSEAVVYQRVLLGL 139
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ R D+ +E S++T+QNAQFS ++++ + I LVSSA HL+R++LYF+HFGI+
Sbjct: 140 GIPRADLIMEPSSMNTWQNAQFSQPLLRDYRPDRIALVSSATHLRRAELYFRHFGIDATP 199
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 200 VRADWLTATWSILPQSYNFTLADVALHEYLGI 231
>gi|325924933|ref|ZP_08186362.1| hypothetical protein XPE_0280 [Xanthomonas perforans 91-118]
gi|325544656|gb|EGD16010.1| hypothetical protein XPE_0280 [Xanthomonas perforans 91-118]
Length = 253
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 132/212 (62%), Gaps = 5/212 (2%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
++ ++ +L+F+ +G G +P+ +L+HLQ + + W N+IVLLG GT + P
Sbjct: 26 RVLGLASLLLVFA-VGCGPLPSWMLQHLQRTGVNDFNA--WGAR-NVIVLLGAGT-VRPE 80
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
E + +Y RI E+ RLY C+ C I ISGGD + GL+E++VY LL
Sbjct: 81 GRDAVAEANLFAYGRIVESARLYWQCRHSGGDCKIEISGGDARGLGLSEAVVYQRVLLGL 140
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ R D+ +E S++T+QNAQFS +++ + I LVSSA HL+R++LYF+HFGI+
Sbjct: 141 GIPRADLIMEPSSMNTWQNAQFSQPLLRAYRPDRIALVSSATHLRRAELYFRHFGIDATP 200
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 201 VRADWLTATWSILPQSYNFTLADVALHEYLGI 232
>gi|78047302|ref|YP_363477.1| hypothetical protein XCV1746 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035732|emb|CAJ23423.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 252
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 132/212 (62%), Gaps = 5/212 (2%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
++ ++ +L+F+ +G G +P+ +L+HLQ + + W N+IVLLG GT + P
Sbjct: 25 RVLGLASLLLVFA-VGCGPLPSWMLQHLQRTGVNDFNA--WGAR-NVIVLLGAGT-VRPE 79
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
E + +Y RI E+ RLY C+ C I ISGGD + GL+E++VY LL
Sbjct: 80 GRDAVAEANLFAYGRIVESARLYWQCRHSGGDCKIEISGGDARGLGLSEAVVYQRVLLGL 139
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ R D+ +E S++T+QNAQFS +++ + I LVSSA HL+R++LYF+HFGI+
Sbjct: 140 GIPRADLIMEPSSMNTWQNAQFSQPLLRAYRPDRIALVSSATHLRRAELYFRHFGIDATP 199
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 200 VRADWLTATWSILPQSYNFTLADVALHEYLGI 231
>gi|188575890|ref|YP_001912819.1| transmembrane [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520342|gb|ACD58287.1| transmembrane [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 253
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 135/218 (61%), Gaps = 7/218 (3%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
++ ++ +L+F+ +G G +P+ +L HLQ + + W N+IVLLG GT + P
Sbjct: 26 RVLGLTSVLLVFA-VGCGPLPSWMLHHLQHTGVNDFNA--WGAR-NVIVLLGAGT-VRPE 80
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
E + +Y RI E+ RLY+ C+ C I ISGGDP+ GL+E++VY L++
Sbjct: 81 GRDAVAEANMFAYGRIVESARLYQQCRHSGGDCKIEISGGDPRGLGLSEAVVYRRVLVDL 140
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+ + D+ +E S++T QNAQFS +++ + I+LVSSA HL R++LYF+HFGI+
Sbjct: 141 AIPQADVIMEPSSMNTLQNAQFSQPLLRAYRPDRIVLVSSATHLCRAELYFRHFGIDATP 200
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+D+L A +SI+P S NF L ++AL EY+G +A YR
Sbjct: 201 VRADWLTATWSILPQSYNFTLADVALHEYLG--MARYR 236
>gi|325916062|ref|ZP_08178352.1| hypothetical protein XVE_2286 [Xanthomonas vesicatoria ATCC 35937]
gi|325537738|gb|EGD09444.1| hypothetical protein XVE_2286 [Xanthomonas vesicatoria ATCC 35937]
Length = 253
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 142/236 (60%), Gaps = 7/236 (2%)
Query: 1 MLLSWIFLIVSY-WHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
M+L+ + ++ + W L + +R+ +LL IG G +P+ +L++LQ +
Sbjct: 1 MMLALVCVLFGFAWLLDRRGLRRFSRVLAGASLLLVLAIGCGPLPSWMLQNLQRTGVNDF 60
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
W N+IVLLG GT + P E + +Y RI E+ RLY+ C+ C I
Sbjct: 61 --NGWGAR-NVIVLLGAGT-VRPEGRDAVAEANMFAYGRIVESARLYRQCRHSGGDCKIE 116
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGGD + GL+E++VY L+ G++R D+ +E S++T+QNAQFS +++ + ++
Sbjct: 117 ISGGDARGLGLSEAVVYQRVLIGLGIDRADLIMEPSSMNTWQNAQFSQPLLRAHRPDRVV 176
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
LVSSA HL+R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 177 LVSSATHLRRAELYFRHFGIDAIPVRADWLTASWSILPQSYNFTLADVALHEYLGI 232
>gi|166712483|ref|ZP_02243690.1| hypothetical protein Xoryp_13775 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 253
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 133/212 (62%), Gaps = 5/212 (2%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
++ ++ +L+F+ +G G +P+ +L HLQ + + W N+IVLLG GT + P
Sbjct: 26 RVLGLTSVLLVFA-VGCGPLPSWMLHHLQHTGVSDFNA--WGAR-NVIVLLGAGT-VRPE 80
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ E + +Y RI E+ RLY+ C+ C I ISGGDP+ GL+E++VY L+
Sbjct: 81 GRDVVAEANMFAYGRIVESARLYQQCRHSGGDCKIEISGGDPRGLGLSEAVVYRRVLVGL 140
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+ + D+ +E S++T+QNAQFS +++ + I+LVSSA HL R++LYF+HFGI+
Sbjct: 141 AIPQADVIIEPSSMNTWQNAQFSQPLLRAYRPDRIVLVSSATHLCRAELYFRHFGIDATP 200
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+D+L A +SI+P S NF L ++AL EY+G+
Sbjct: 201 VRADWLTATWSILPQSYNFTLADVALHEYLGM 232
>gi|84624480|ref|YP_451852.1| hypothetical protein XOO_2823 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84368420|dbj|BAE69578.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 253
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 134/218 (61%), Gaps = 7/218 (3%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
++ ++ +L+F+ +G G +P+ +L HLQ + + W N+IVLLG GT + P
Sbjct: 26 RVLGLTSVLLVFA-VGCGPLPSWMLHHLQHTGVNDFNA--WGAR-NVIVLLGAGT-VRPE 80
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
E + +Y RI E+ RLY+ C+ C I ISGGDP+ GL+E++VY L++
Sbjct: 81 GRDAVAEANMFAYGRIVESARLYQQCRHSGGDCKIEISGGDPRGLGLSEAVVYRRVLVDL 140
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+ + D+ +E S++T QNAQFS +++ I+LVSSA HL R++LYF+HFGI+
Sbjct: 141 AIPQADVIMEPSSMNTLQNAQFSQPLLRAYGPDRIVLVSSATHLCRAELYFRHFGIDATP 200
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+D+L A +SI+P S NF L ++AL EY+G +A YR
Sbjct: 201 VRADWLTATWSILPQSYNFTLADVALHEYLG--MARYR 236
>gi|160872133|ref|ZP_02062265.1| transmembrane [Rickettsiella grylli]
gi|159120932|gb|EDP46270.1| transmembrane [Rickettsiella grylli]
Length = 282
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 127/211 (60%), Gaps = 4/211 (1%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
S +L + FIG G+IP LL +LQ +Y L +P K N I+LLG GT+ P IR
Sbjct: 61 SIVILSYFFIGNGVIPAYLLHNLQSAYN--LSTPIHWKQKNTIILLGAGTSKDPKSNKIR 118
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS ++SRI +T+ LY CK+ + CTI+ISGGDP +G E+ +Y LL G+
Sbjct: 119 --PSLFAFSRIIQTVLLYHKCKKANTICTILISGGDPLNNGNTEATIYQEALLSLGINAK 176
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
DI+LETQS +T+QNA+FSS ++K ++LV+SA+ LKRS LYF F I SD+
Sbjct: 177 DIQLETQSNNTYQNAKFSSFLLKKQDSSQLLLVNSAFTLKRSLLYFSFFNIYPTPIASDF 236
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ ++ P+ NF + + + EY+GI Y
Sbjct: 237 ITIPFTRYPIGYNFAMNDFVIHEYVGIFRFY 267
>gi|325923915|ref|ZP_08185510.1| hypothetical protein XGA_4563 [Xanthomonas gardneri ATCC 19865]
gi|325545597|gb|EGD16856.1| hypothetical protein XGA_4563 [Xanthomonas gardneri ATCC 19865]
Length = 253
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 114/173 (65%), Gaps = 3/173 (1%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
N+IVLLG GT + P P E + +Y RI E+ RLY+ C+ H C I ISGGD +
Sbjct: 67 NMIVLLGAGT-VRPDGPDATAEANMFAYGRIVESARLYRQCRAHGGDCKIEISGGDARGL 125
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
GL+E++VY L+ G+++ D+ +E S++T+QNAQFS +++ + ++LVSSA HL+
Sbjct: 126 GLSEAVVYRKVLIGIGIDQADLIMEPSSMNTWQNAQFSQPLLRKYRADRVVLVSSATHLR 185
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R++LYF+HFGI SD+L A ++ +P S NF + ++AL EY+G IA YR
Sbjct: 186 RAELYFRHFGIEATPVRSDWLTASWAWLPQSYNFTVADVALHEYLG--IARYR 236
>gi|53716341|ref|YP_106250.1| hypothetical protein BMAA1685 [Burkholderia mallei ATCC 23344]
gi|53722689|ref|YP_111674.1| hypothetical protein BPSS1669 [Burkholderia pseudomallei K96243]
gi|67640781|ref|ZP_00439576.1| putative membrane protein [Burkholderia mallei GB8 horse 4]
gi|76818145|ref|YP_335892.1| hypothetical protein BURPS1710b_A0733 [Burkholderia pseudomallei
1710b]
gi|121597067|ref|YP_991282.1| hypothetical protein BMASAVP1_1688 [Burkholderia mallei SAVP1]
gi|124381902|ref|YP_001025692.1| hypothetical protein BMA10229_1895 [Burkholderia mallei NCTC 10229]
gi|126442720|ref|YP_001063394.1| hypothetical protein BURPS668_A2400 [Burkholderia pseudomallei 668]
gi|126446879|ref|YP_001077768.1| hypothetical protein BMA10247_A0567 [Burkholderia mallei NCTC
10247]
gi|126458095|ref|YP_001076296.1| hypothetical protein BURPS1106A_A2263 [Burkholderia pseudomallei
1106a]
gi|166999439|ref|ZP_02265278.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
gi|167743403|ref|ZP_02416177.1| hypothetical protein Bpse14_35344 [Burkholderia pseudomallei 14]
gi|167820589|ref|ZP_02452269.1| hypothetical protein Bpse9_36024 [Burkholderia pseudomallei 91]
gi|167828952|ref|ZP_02460423.1| hypothetical protein Bpseu9_35016 [Burkholderia pseudomallei 9]
gi|167850424|ref|ZP_02475932.1| hypothetical protein BpseB_34607 [Burkholderia pseudomallei B7210]
gi|167908429|ref|ZP_02495634.1| hypothetical protein BpseN_39774 [Burkholderia pseudomallei NCTC
13177]
gi|167915704|ref|ZP_02502795.1| hypothetical protein Bpse112_34808 [Burkholderia pseudomallei 112]
gi|167923545|ref|ZP_02510636.1| hypothetical protein BpseBC_33634 [Burkholderia pseudomallei
BCC215]
gi|237508202|ref|ZP_04520917.1| putative membrane protein [Burkholderia pseudomallei MSHR346]
gi|254175884|ref|ZP_04882542.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|254205102|ref|ZP_04911455.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|52213103|emb|CAH39142.1| putative membrane protein [Burkholderia pseudomallei K96243]
gi|52422311|gb|AAU45881.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|76582618|gb|ABA52092.1| Uncharacterized ACR, COG1434 family [Burkholderia pseudomallei
1710b]
gi|121224865|gb|ABM48396.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|126222211|gb|ABN85716.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
gi|126231863|gb|ABN95276.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
gi|126239733|gb|ABO02845.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247]
gi|147754688|gb|EDK61752.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|160696926|gb|EDP86896.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|235000407|gb|EEP49831.1| putative membrane protein [Burkholderia pseudomallei MSHR346]
gi|238521564|gb|EEP85015.1| putative membrane protein [Burkholderia mallei GB8 horse 4]
gi|243064501|gb|EES46687.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
gi|261826553|gb|ABM99690.2| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
Length = 255
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 132/221 (59%), Gaps = 11/221 (4%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ F++ F+ IG G++P LL+ LQ Y RP + +W + N IV+LG GT I
Sbjct: 26 RALFVATVAAFFA-IGCGLVPAWLLRALQAPYAARPAI--EWGER-NAIVMLGLGTEKIA 81
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQH--SMHCTIIISGGDPQKHGLAESIVYNNKL 138
A+ EP SYSR+ E LY+ C++ C I++SGGD +++G+ E+ VY + L
Sbjct: 82 ATGAV--EPGTFSYSRVVEAASLYRDCRRARADADCKILVSGGDARRNGVPEASVYRDAL 139
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ G++ D+ E +S++T+QNAQF+ + + ++LV+S HL+RS LYF HFG+
Sbjct: 140 VGVGIDAADVLSEPRSMNTWQNAQFTRVALDGYRADRVLLVTSGIHLRRSMLYFAHFGVA 199
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A ++YL A +PL+ NF + +LAL EY+G IA YR
Sbjct: 200 AIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLG--IARYR 238
>gi|134278721|ref|ZP_01765435.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|134250505|gb|EBA50585.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
Length = 255
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 132/221 (59%), Gaps = 11/221 (4%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ F++ F+ IG G++P LL+ LQ Y RP + +W + N IV+LG GT I
Sbjct: 26 RALFVATVAAFFA-IGCGLVPAWLLRALQAPYAARPAI--EWGER-NAIVMLGLGTEKIA 81
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQH--SMHCTIIISGGDPQKHGLAESIVYNNKL 138
A+ EP SYSR+ E LY+ C++ C I++SGGD +++G+ E+ VY + L
Sbjct: 82 ATGAV--EPGTFSYSRVVEAASLYRDCRRARADADCKILVSGGDARRNGVPEASVYRDAL 139
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ G++ D+ E +S++T+QNAQF+ + + ++LV+S HL+RS LYF HFG+
Sbjct: 140 VGVGIDAADVLSEPRSMNTWQNAQFTRVALDGYRADRVLLVTSGIHLRRSMLYFAHFGVA 199
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A ++YL A +PL+ NF + +LAL EY+G IA YR
Sbjct: 200 AIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLG--IARYR 238
>gi|309780144|ref|ZP_07674895.1| membrane protein [Ralstonia sp. 5_7_47FAA]
gi|308920847|gb|EFP66493.1| membrane protein [Ralstonia sp. 5_7_47FAA]
Length = 262
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 123/204 (60%), Gaps = 8/204 (3%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+L IG G +P LL L+ ++ P + QW N IVLLG GT + +EP
Sbjct: 45 VLVIAIGCGPVPAWLLDSLEKPFENEPHV--QWGAR-NAIVLLGAGTFRV----GDSVEP 97
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
SY R+ ET +LY++C++ C I++SGGD + HG E+ VY +L+ GV +DD+
Sbjct: 98 GLFSYPRLVETTQLYQACRKSDGDCKILVSGGDARHHGSPEATVYQRELVRLGVAKDDVL 157
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+E QS++T+QNAQFS +++ +LVSSA HL+RS LYF HFG+ +D L A
Sbjct: 158 IEPQSMNTWQNAQFSRTVLAQYGADRTVLVSSAIHLRRSLLYFTHFGMAPVPVRADDLQA 217
Query: 210 YYSIIPLSANFYLTELALKEYIGI 233
S +P++ NF LT+ AL E+IGI
Sbjct: 218 AASPLPMAYNFALTDFALHEWIGI 241
>gi|187927155|ref|YP_001897642.1| hypothetical protein Rpic_0045 [Ralstonia pickettii 12J]
gi|187724045|gb|ACD25210.1| protein of unknown function DUF218 [Ralstonia pickettii 12J]
Length = 266
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 123/204 (60%), Gaps = 8/204 (3%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+L IG G +P LL L+ ++ P + QW N IVLLG GT + +EP
Sbjct: 49 VLVIAIGCGPVPAWLLDSLEKPFENEPHV--QWGAR-NAIVLLGAGTFRV----GDSVEP 101
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
SY R+ ET +LY++C++ C I++SGGD + HG E+ VY +L+ GV +DD+
Sbjct: 102 GLFSYPRLVETTQLYQACRKSDGDCKILVSGGDARHHGSPEATVYQRELVRLGVAKDDVL 161
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+E QS++T+QNAQFS +++ +LVSSA HL+RS LYF HFG+ +D L A
Sbjct: 162 IEPQSMNTWQNAQFSRTVLAQYGADRTVLVSSAIHLRRSLLYFTHFGMAPVPVRADDLQA 221
Query: 210 YYSIIPLSANFYLTELALKEYIGI 233
S +P++ NF LT+ AL E+IGI
Sbjct: 222 AASPLPMAYNFALTDFALHEWIGI 245
>gi|167899018|ref|ZP_02486419.1| hypothetical protein Bpse7_35118 [Burkholderia pseudomallei 7894]
Length = 255
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 129/215 (60%), Gaps = 9/215 (4%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ F++ F+ IG G++P LL+ LQ Y RP + +W + N IV+LG GT I
Sbjct: 26 RALFVATVAAFFA-IGCGLVPAWLLRALQAPYAARPAI--EWGER-NAIVMLGLGTEKIA 81
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQH--SMHCTIIISGGDPQKHGLAESIVYNNKL 138
A+ EP SYSR+ E LY+ C++ C I++SGGD +++G+ E+ VY + L
Sbjct: 82 ATGAV--EPGTFSYSRVVEAASLYRDCRRARADADCKILVSGGDARRNGVPEASVYRDAL 139
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ G++ D+ E +S++T+QNAQF+ + + ++LV+S HL+RS LYF HFG+
Sbjct: 140 VGVGIDSADVLSEPRSMNTWQNAQFTRVALDGYRADRVLLVTSGIHLRRSMLYFAHFGVA 199
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
A ++YL A +PL+ NF + +LAL EY+GI
Sbjct: 200 AIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLGI 234
>gi|289661763|ref|ZP_06483344.1| hypothetical protein XcampvN_01352 [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 253
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 134/216 (62%), Gaps = 5/216 (2%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + ++ ++ +L+F+ +G G +P+ +L+ LQ + + W N+IVLLG GT
Sbjct: 22 RRLSRVLGLTSLLLVFA-VGCGPLPSWMLQRLQHTGVNDFNA--WGGR-NVIVLLGAGT- 76
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ P E + +Y RI E+ RLY+ C+ C I ISGGD + GL+E++VY
Sbjct: 77 VRPEGRDAVAEANMFAYGRIVESARLYQQCRHSGGDCKIEISGGDARGLGLSEAVVYQRV 136
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ + + D+ LE S++T+QNAQFS +++ + I+LVSSA HL+R++LYF+HFGI
Sbjct: 137 LVGLAIPQADLILEPSSMNTWQNAQFSQPLLRAYRPDRIVLVSSATHLRRAELYFRHFGI 196
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ +D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 197 DATPVRADWLTASWSILPQSYNFTLADVALHEYLGI 232
>gi|217422760|ref|ZP_03454263.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|226200064|ref|ZP_03795613.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242312781|ref|ZP_04811798.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|254186269|ref|ZP_04892787.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|254194017|ref|ZP_04900449.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|254201133|ref|ZP_04907498.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|254262741|ref|ZP_04953606.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
gi|254301320|ref|ZP_04968764.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|254359227|ref|ZP_04975499.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|147748745|gb|EDK55820.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|148028414|gb|EDK86374.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|157811319|gb|EDO88489.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|157933955|gb|EDO89625.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|169650768|gb|EDS83461.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|217394991|gb|EEC35010.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|225927916|gb|EEH23954.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242136020|gb|EES22423.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|254213743|gb|EET03128.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
Length = 298
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 132/221 (59%), Gaps = 11/221 (4%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ F++ F+ IG G++P LL+ LQ Y RP + +W + N IV+LG GT I
Sbjct: 69 RALFVATVAAFFA-IGCGLVPAWLLRALQAPYAARPAI--EWGER-NAIVMLGLGTEKIA 124
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQH--SMHCTIIISGGDPQKHGLAESIVYNNKL 138
A+ EP SYSR+ E LY+ C++ C I++SGGD +++G+ E+ VY + L
Sbjct: 125 ATGAV--EPGTFSYSRVVEAASLYRDCRRARADADCKILVSGGDARRNGVPEASVYRDAL 182
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ G++ D+ E +S++T+QNAQF+ + + ++LV+S HL+RS LYF HFG+
Sbjct: 183 VGVGIDAADVLSEPRSMNTWQNAQFTRVALDGYRADRVLLVTSGIHLRRSMLYFAHFGVA 242
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A ++YL A +PL+ NF + +LAL EY+G IA YR
Sbjct: 243 AIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLG--IARYR 281
>gi|86146806|ref|ZP_01065126.1| hypothetical protein MED222_15709 [Vibrio sp. MED222]
gi|85835456|gb|EAQ53594.1| hypothetical protein MED222_15709 [Vibrio sp. MED222]
Length = 253
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 121/196 (61%), Gaps = 4/196 (2%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
G G+IP LL LQ +Y+R QW N I LLG GT +I + EP+F S+ R
Sbjct: 40 GSGLIPRYLLNDLQANYERKP-DIQWTSH-NAIFLLGAGTQLIASTQ--EFEPTFFSFGR 95
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
I ET YK+C + C +I+SGGD Q +G+ E+ VY +LL GV DI E+ S++
Sbjct: 96 INETASQYKNCAKAQTICKVIVSGGDAQNNGVTEAEVYQQQLLRLGVPLADIIQESNSVN 155
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
T++NAQ +S ++K+ Q NI+LVSS H++RS+LYF HFG+N +DY+ A S +PL
Sbjct: 156 TWKNAQLTSDLMKHHQFDNIVLVSSGLHIRRSELYFNHFGLNVIPVRADYMAAQISWLPL 215
Query: 217 SANFYLTELALKEYIG 232
NF +T+ AL E +G
Sbjct: 216 WYNFAVTDFALHEQLG 231
>gi|254185037|ref|ZP_04891626.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|184215629|gb|EDU12610.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
Length = 298
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 132/221 (59%), Gaps = 11/221 (4%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ F++ F+ IG G++P LL+ LQ Y RP + +W + N IV+LG GT I
Sbjct: 69 RALFVATVAAFFA-IGCGLVPAWLLRALQAPYAARPAI--EWGER-NAIVMLGLGTEKIA 124
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQH--SMHCTIIISGGDPQKHGLAESIVYNNKL 138
A+ EP SYSR+ E LY+ C++ C I++SGGD +++G+ E+ VY + L
Sbjct: 125 ATGAV--EPGTFSYSRVVEAASLYRDCRRARADADCKILVSGGDARRNGVPEASVYRDAL 182
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ G++ D+ E +S++T+QNAQF+ + + ++LV+S HL+RS LYF HFG+
Sbjct: 183 VGVGIDSADVLSEPRSMNTWQNAQFTRVALDGYRADRVLLVTSGIHLRRSMLYFAHFGVA 242
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A ++YL A +PL+ NF + +LAL EY+G IA YR
Sbjct: 243 AIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLG--IARYR 281
>gi|289668714|ref|ZP_06489789.1| hypothetical protein XcampmN_09524 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 253
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 132/212 (62%), Gaps = 5/212 (2%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
++ ++ +L+F+ +G G +P+ +L+ LQ + + W N+IVLLG GT + P
Sbjct: 26 RVLGLTSLLLVFA-VGCGPLPSWMLQRLQHTGVNDFNA--WGGR-NVIVLLGAGT-VRPE 80
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
E + +Y RI E+ RLY+ C+ C I ISGGD + GL+E++VY L+
Sbjct: 81 GRDAVAEANMFAYGRIVESARLYQQCRHSGGDCKIEISGGDARGLGLSEAVVYQRVLVGL 140
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+ + D+ LE S++T+QNAQFS +++ + I+LVSSA HL+R++LYF+HFGI+
Sbjct: 141 AIPQADLILEPSSMNTWQNAQFSQPLLRAYRPDRIVLVSSATHLRRAELYFRHFGIDATP 200
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 201 VRADWLTASWSILPQSYNFTLADVALHEYLGI 232
>gi|241661663|ref|YP_002980023.1| hypothetical protein Rpic12D_0039 [Ralstonia pickettii 12D]
gi|240863690|gb|ACS61351.1| protein of unknown function DUF218 [Ralstonia pickettii 12D]
Length = 251
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 126/207 (60%), Gaps = 9/207 (4%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
C +L+ + IG G +P LL L+ ++ P + QW N IVLLG GT +
Sbjct: 32 CGVLVIA-IGCGPMPAWLLDSLEKPFENEPHI--QWGTR-NAIVLLGAGTFRV----GDS 83
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+EP SY R+ ET +LY++C++ C I++SGGD + HG E+ VY +L+ GV +D
Sbjct: 84 VEPGLFSYPRLVETTQLYQACRKSDGDCKILVSGGDARHHGSPEATVYQRELVRLGVAKD 143
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
D+ +E QS++T+QNAQFS +++ +LVSSA HL+RS LYF HFG+ +D
Sbjct: 144 DVLIEPQSMNTWQNAQFSRTVLAQYAPDRTVLVSSAIHLRRSLLYFTHFGMAPIPVRADD 203
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGI 233
L A S +P++ NF LT+ AL E+IGI
Sbjct: 204 LQAAASPLPMAYNFALTDFALHEWIGI 230
>gi|167566356|ref|ZP_02359272.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis EO147]
Length = 255
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 128/212 (60%), Gaps = 10/212 (4%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+LF IG G +P LL+HLQ Y RP + +W + N IV+LG GT I A+ EP
Sbjct: 34 VLFFAIGCGPVPAWLLRHLQAPYAARPAI--EWGER-NAIVMLGLGTEKIAATGAV--EP 88
Query: 90 SFQSYSRIFETMRLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
SYSR+ E LY C++ + C I++SGGD +++G+ E+ VY + L+ G++ D
Sbjct: 89 GTFSYSRVVEAASLYHGCRKARANAGCKIVVSGGDARRNGVPEATVYRDALIGLGIDAAD 148
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
+ E +S++T+QNAQF+ ++ + ++LV+S HL+RS LYF HFG+ ++YL
Sbjct: 149 VLSEPRSMNTWQNAQFTRVVLAGYRADRVLLVTSGVHLRRSMLYFAHFGVAAIPVRAEYL 208
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A +PL+ NF +LAL EY+G IA YR
Sbjct: 209 QAMLFPLPLAYNFSAADLALHEYLG--IARYR 238
>gi|167573468|ref|ZP_02366342.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis C6786]
Length = 255
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 132/221 (59%), Gaps = 11/221 (4%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ F + +L F+ IG G +P LL+HLQ Y RP + +W + N IV+LG GT I
Sbjct: 26 RASFAASAVLFFA-IGCGPVPAWLLRHLQAPYAARPAI--EWGER-NAIVMLGLGTEKIA 81
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYNNKL 138
A+ EP SYSR+ E LY C++ + C I++SGGD +++G+ E+ VY + L
Sbjct: 82 ATGAV--EPGTFSYSRVVEAASLYHGCRKARANAGCKIVVSGGDARRNGVPEATVYRDAL 139
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ G++ D+ E +S++T+QNAQF+ ++ + ++LV+S HL+RS LYF HFG+
Sbjct: 140 IGLGIDAADVLSEPRSMNTWQNAQFTRVVLAGYRADRVLLVTSGVHLRRSVLYFAHFGVA 199
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++YL A +PL+ NF +LAL EY+G IA YR
Sbjct: 200 AIPVRAEYLQAMLFPLPLAYNFSAADLALHEYLG--IARYR 238
>gi|207727627|ref|YP_002256021.1| lipoprotein [Ralstonia solanacearum MolK2]
gi|206590866|emb|CAQ56478.1| lipoprotein [Ralstonia solanacearum MolK2]
Length = 251
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 120/205 (58%), Gaps = 8/205 (3%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
+ LF IG G +P LL L+ ++ RP ++ W K N IVLLG GT + +E
Sbjct: 33 LALFVAIGCGPVPAWLLDSLEGPFEARPAVA--WGKR-NAIVLLGAGTRRVDG----GVE 85
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P SY R+ E + Y++C++ C I++SGGD + HG E+ VY L G++ D+
Sbjct: 86 PGVFSYPRLMEAAQQYQACRKTDADCKILVSGGDARHHGDPEAAVYRRALQAIGIDAGDV 145
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
LE S++T+QNAQFS + + + +LVSSA HL+RS LYF HFG+ +D L
Sbjct: 146 LLEPNSMNTWQNAQFSRAALAAYAPERTVLVSSAIHLRRSLLYFTHFGMTPTPVRADDLQ 205
Query: 209 AYYSIIPLSANFYLTELALKEYIGI 233
A S +PL+ NF +T+ AL E+IGI
Sbjct: 206 ATPSPLPLAINFAMTDYALHEWIGI 230
>gi|207742020|ref|YP_002258412.1| lipoprotein [Ralstonia solanacearum IPO1609]
gi|206593406|emb|CAQ60333.1| lipoprotein [Ralstonia solanacearum IPO1609]
Length = 251
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 120/205 (58%), Gaps = 8/205 (3%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
+ LF IG G +P LL L+ ++ RP ++ W K N IVLLG GT + +E
Sbjct: 33 LALFVAIGCGPVPAWLLDSLEGPFEARPAVA--WGKR-NAIVLLGAGTRRVDG----GVE 85
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P SY R+ E + Y++C++ C I++SGGD + HG E+ VY L G++ D+
Sbjct: 86 PGVFSYPRLMEAAQQYQACRKTDADCKILVSGGDARHHGDPEAAVYRRALQAIGIDAGDV 145
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
LE S++T+QNAQFS + + + +LVSSA HL+RS LYF HFG+ +D L
Sbjct: 146 LLEPNSMNTWQNAQFSRAALAAYAPERTVLVSSAIHLRRSLLYFTHFGMTPTPVRADDLQ 205
Query: 209 AYYSIIPLSANFYLTELALKEYIGI 233
A S +PL+ NF +T+ AL E+IGI
Sbjct: 206 ATPSPLPLAINFAMTDYALHEWIGI 230
>gi|83745961|ref|ZP_00943017.1| Integral membrane protein [Ralstonia solanacearum UW551]
gi|83727355|gb|EAP74477.1| Integral membrane protein [Ralstonia solanacearum UW551]
Length = 265
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 120/205 (58%), Gaps = 8/205 (3%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
+ LF IG G +P LL L+ ++ RP ++ W K N IVLLG GT + +E
Sbjct: 47 LALFVAIGCGPVPAWLLDSLEGPFEARPAVA--WGKR-NAIVLLGAGTRRVDG----GVE 99
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P SY R+ E + Y++C++ C I++SGGD + HG E+ VY L G++ D+
Sbjct: 100 PGVFSYPRLMEAAQQYQACRKTDADCKILVSGGDARHHGDPEAAVYRRALQAIGIDAGDV 159
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
LE S++T+QNAQFS + + + +LVSSA HL+RS LYF HFG+ +D L
Sbjct: 160 LLEPNSMNTWQNAQFSRAALAAYAPERTVLVSSAIHLRRSLLYFTHFGMTPTPVRADDLQ 219
Query: 209 AYYSIIPLSANFYLTELALKEYIGI 233
A S +PL+ NF +T+ AL E+IGI
Sbjct: 220 ATPSPLPLAINFAMTDYALHEWIGI 244
>gi|300692848|ref|YP_003753843.1| lipoprotein transmembrane [Ralstonia solanacearum PSI07]
gi|299079908|emb|CBM10289.1| putative lipoprotein transmembrane [Ralstonia solanacearum PSI07]
Length = 251
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 120/205 (58%), Gaps = 8/205 (3%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
+ LF IG G +P LL L+ ++ RP ++ W K N IVLLG GT + +E
Sbjct: 33 LALFIAIGCGPVPAWLLDSLEGPFEARPAVA--WGKR-NAIVLLGAGTRRVDG----GVE 85
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P SY R+ E + Y++C++ C I++SGGD + HG E+ VY L G+ DD+
Sbjct: 86 PGVFSYPRLMEAAQQYQACRKTGADCKILVSGGDARHHGDPEATVYQRALQAIGIGTDDV 145
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
LE S++T+QNAQFS + + + +LVSSA HL+RS LYF HFG+ +D L
Sbjct: 146 LLEPNSMNTWQNAQFSRAALAAYAPERTVLVSSAIHLRRSLLYFTHFGMMPTPMRADDLQ 205
Query: 209 AYYSIIPLSANFYLTELALKEYIGI 233
A S +PL+ NF +T+ AL E+IGI
Sbjct: 206 ATPSPLPLAINFAMTDYALHEWIGI 230
>gi|300705462|ref|YP_003747065.1| lipoprotein [Ralstonia solanacearum CFBP2957]
gi|299073126|emb|CBJ44484.1| putative lipoprotein transmembrane [Ralstonia solanacearum
CFBP2957]
Length = 251
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 120/205 (58%), Gaps = 8/205 (3%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
+ LF IG G +P LL L+ ++ RP ++ W K N IVLLG GT + +E
Sbjct: 33 LALFVAIGCGPVPAWLLDSLEGPFEARPAVA--WGKR-NAIVLLGAGTRRVDG----GVE 85
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P SY R+ E + Y++C++ C I++SGGD + HG E+ VY L G++ D+
Sbjct: 86 PGVFSYPRLMEAAQQYQACRKTDADCKILVSGGDARHHGDPEAAVYRRALQAIGIDAADV 145
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
LE S++T+QNAQFS + + + +LVSSA HL+RS LYF HFG+ +D L
Sbjct: 146 LLEPNSMNTWQNAQFSRTALAAYAPERTVLVSSAIHLRRSLLYFTHFGMTPTPVRADDLQ 205
Query: 209 AYYSIIPLSANFYLTELALKEYIGI 233
A S +PL+ NF +T+ AL E+IGI
Sbjct: 206 ATPSPLPLAINFAMTDYALHEWIGI 230
>gi|299068290|emb|CBJ39511.1| putative lipoprotein transmembrane [Ralstonia solanacearum CMR15]
Length = 251
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 130/230 (56%), Gaps = 9/230 (3%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWK 63
+ +IV+ L Q R ++ L L IG G +P LL L+ ++ RP+++ W
Sbjct: 8 LLVIVTAICALRQRRRTARGLAAVSLALVIAIGCGPVPAWLLDSLEGPFEARPVVT--WG 65
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K N IVLLG GT + +EP SY R+ E + Y++C++ C I++SGGD
Sbjct: 66 KR-NAIVLLGAGTRRVEG----GVEPGVFSYPRLMEAAQQYQACRKTGADCKILVSGGDA 120
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ HG E+ VY L G+ DD+ LE S++T+QNAQFS + + + +LVSSA
Sbjct: 121 RHHGDPEAAVYQRALQAIGIGADDVLLEPNSMNTWQNAQFSRTALAAYAPERTVLVSSAI 180
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
HL+RS LYF HFG+ +D L A S +PL+ NF +T+ AL E+IGI
Sbjct: 181 HLRRSLLYFAHFGMTPTPVRADDLQATPSPLPLAFNFAMTDYALHEWIGI 230
>gi|17544865|ref|NP_518267.1| lipoprotein transmembrane [Ralstonia solanacearum GMI1000]
gi|17427154|emb|CAD13674.1| probable lipoprotein transmembrane [Ralstonia solanacearum GMI1000]
Length = 251
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 117/199 (58%), Gaps = 8/199 (4%)
Query: 36 IGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
IG G +P LL L+ ++ RP ++ W K N IVLLG GT + +EP SY
Sbjct: 39 IGCGPVPAWLLDSLEGPFEARPAVT--WGKR-NAIVLLGAGTRRVEG----GVEPGVFSY 91
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ E + Y++C++ C I++SGGD + HG E+ VY LL G+ DD+ LE S
Sbjct: 92 PRLMEAAQQYQACRKTGADCKILVSGGDARHHGDPEATVYQRALLAIGIGADDVLLEPNS 151
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
++T+QNAQFS + + + +LVSSA HL+RS LYF HFG+ +D L A S +
Sbjct: 152 MNTWQNAQFSRTALAAYAPERTVLVSSAIHLRRSLLYFAHFGMTPTPVRADDLQATPSPL 211
Query: 215 PLSANFYLTELALKEYIGI 233
PL+ NF + + AL E+IGI
Sbjct: 212 PLAFNFAMADYALHEWIGI 230
>gi|58582596|ref|YP_201612.1| hypothetical protein XOO2973 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58427190|gb|AAW76227.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 210
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 123/199 (61%), Gaps = 6/199 (3%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P+ +L HLQ + + W N+IVLLG GT + P E + +Y RI E+
Sbjct: 1 MPSWMLHHLQHTGVNDFNA--WGAR-NVIVLLGAGT-VRPEGRDAVAEANMFAYGRIVES 56
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
RLY+ C+ C I ISGGDP+ GL+E++VY L++ + + D+ +E S++T QN
Sbjct: 57 ARLYQQCRHSGGDCKIEISGGDPRGLGLSEAVVYRRVLVDLAIPQADVIMEPSSMNTLQN 116
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF 220
AQFS +++ + I+LVSSA HL R++LYF+HFGI+ +D+L A +SI+P S NF
Sbjct: 117 AQFSQPLLRAYRPDRIVLVSSATHLCRAELYFRHFGIDATPVRADWLTATWSILPQSYNF 176
Query: 221 YLTELALKEYIGILIAYYR 239
L ++AL EY+G +A YR
Sbjct: 177 TLADVALHEYLG--MARYR 193
>gi|21231145|ref|NP_637062.1| hypothetical protein XCC1692 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768847|ref|YP_243609.1| hypothetical protein XC_2539 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188991962|ref|YP_001903972.1| hypothetical protein xccb100_2567 [Xanthomonas campestris pv.
campestris str. B100]
gi|21112782|gb|AAM40986.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66574179|gb|AAY49589.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167733722|emb|CAP51927.1| Putative membrane protein [Xanthomonas campestris pv. campestris]
Length = 253
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 119/201 (59%), Gaps = 6/201 (2%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
G +P+ +L+ LQ + W N IVLLG GT + E + +Y RI
Sbjct: 42 GPLPSWMLRDLQRTGANDF--TDWGAR-NAIVLLGAGT-VRSDRAGAPAEANVFAYGRIV 97
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
E RLY++C C I ISGGD + GL+E++VY LL GVE D+ LE S+ T+
Sbjct: 98 EAARLYRACAATGNDCKIEISGGDARGLGLSEAVVYRRVLLGLGVEAGDLILEPASMTTW 157
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
QNAQFS +++ + + I+LVSSA HL R++LYF HFG+ T SD+L A +S++P S
Sbjct: 158 QNAQFSQPLLRAYRPQRIVLVSSATHLHRAELYFLHFGMRTTPVRSDWLRASWSLLPQSY 217
Query: 219 NFYLTELALKEYIGILIAYYR 239
NF L ++AL EY+G IA YR
Sbjct: 218 NFTLADVALHEYLG--IARYR 236
>gi|83717478|ref|YP_438905.1| hypothetical protein BTH_II0706 [Burkholderia thailandensis E264]
gi|167577281|ref|ZP_02370155.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis TXDOH]
gi|167615420|ref|ZP_02384055.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis Bt4]
gi|257141992|ref|ZP_05590254.1| hypothetical protein BthaA_22676 [Burkholderia thailandensis E264]
gi|83651303|gb|ABC35367.1| Uncharacterized ACR, COG1434 family [Burkholderia thailandensis
E264]
Length = 255
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 124/207 (59%), Gaps = 10/207 (4%)
Query: 36 IGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
IG G +P LL+ LQ Y RP ++ W + N IV+LG T I A+ EP SY
Sbjct: 39 IGCGPVPAWLLRELQAPYAARPAIA--WGER-NAIVMLGLATEKIAATGAV--EPGTFSY 93
Query: 95 SRIFETMRLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
SR+ E LY+ C++ + C I++SGGD +++G E+ +Y + L+ GV+ D+ E
Sbjct: 94 SRVVEAASLYRDCRRARANAGCKILVSGGDARRNGAPEASIYRDALIGLGVDAADVLSEP 153
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
+S++T+QNAQF+ +++ + ++LV+S HL+RS LYF HFG+ ++YL A
Sbjct: 154 RSMNTWQNAQFTRAVLDGYRADRVLLVTSGVHLRRSALYFAHFGVAAIPVRAEYLQAVTF 213
Query: 213 IIPLSANFYLTELALKEYIGILIAYYR 239
+PL+ NF + +LAL E +G IA YR
Sbjct: 214 PLPLAYNFSVADLALHECLG--IARYR 238
>gi|167840324|ref|ZP_02467008.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis MSMB43]
Length = 204
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 115/187 (61%), Gaps = 9/187 (4%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH--SM 112
RP + +W N IV+LG GT I A+ EP SYSR+ E LY+ C++ +
Sbjct: 8 RPAI--EWGAR-NAIVMLGLGTEKIAATGAV--EPGTFSYSRVVEAASLYRDCRRARANA 62
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
C +I+SGGD +++G+ E+ VY + L+ G++ D+ E +S++T+QNAQF+ +++ +
Sbjct: 63 DCKLIVSGGDARRNGVPEAAVYRDALIGLGIDAADVLSEPRSMNTWQNAQFTRAVLDGYR 122
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++LV+S HL+RS LYF HFG+ ++YL A +PL+ NF + +LAL EY+G
Sbjct: 123 ADRVLLVTSGIHLRRSVLYFSHFGVAATPVRAEYLQAVTFPLPLAHNFSVADLALHEYLG 182
Query: 233 ILIAYYR 239
IA YR
Sbjct: 183 --IARYR 187
>gi|167587349|ref|ZP_02379737.1| hypothetical protein BuboB_18529 [Burkholderia ubonensis Bu]
Length = 224
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 116/220 (52%), Gaps = 9/220 (4%)
Query: 15 LLCQSIRKIFFMSCFMLLFSF-IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+LC+ R+ F L + GW P I + P+ P +++LLG
Sbjct: 1 MLCRKWRRTIAAVAFALFWLLATGWLAAPLIAWSQAGVT---PVEHPDMHGQ-TVLILLG 56
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
GT I R+EP + RI +T LY+ C+Q + CT+I+SGGDP++HG E+
Sbjct: 57 TGTRRIDG----RLEPRTDGFPRIRKTAALYRDCRQRAERCTVIVSGGDPERHGATEAAT 112
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y L+ GV+ D+ LE S T++NA+F++ ++++ ILV+S+Y ++R+ L F+
Sbjct: 113 YAPYLVARGVDPRDLMLEANSRTTYENAKFTTPILRSRHVDATILVTSSYQMRRALLDFR 172
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
HFGI+ + ++ +A +P N E AL E IGI
Sbjct: 173 HFGIDAQPVYANRRDAQTGWLPRRQNLINAEHALHELIGI 212
>gi|161524938|ref|YP_001579950.1| hypothetical protein Bmul_1765 [Burkholderia multivorans ATCC
17616]
gi|160342367|gb|ABX15453.1| protein of unknown function DUF218 [Burkholderia multivorans ATCC
17616]
Length = 281
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 123/231 (53%), Gaps = 11/231 (4%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI-GWGIIPTILLKHLQFSYQRPLLSPQW 62
S++ L + + LLC+ R+ ++ L + GW P I P+ P
Sbjct: 49 SFVLLFIGF--LLCRKQRRRIALAAVALFWLIASGWLAAPFIAWAEAGVE---PVEHPDM 103
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++++LG GT + P +RI + LY+SC++ + CT+++SGGD
Sbjct: 104 HGQ-TVLIVLGAGTQRADDG----LRPPRDGAARIRKAAELYRSCRRQAERCTVVMSGGD 158
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
PQ HG E+ VY L+ +GV+ D+ LE +S T++NAQF++S++++ + IL++S+
Sbjct: 159 PQHHGDTEAAVYGRGLVAAGVDPGDLVLEPKSRTTYENAQFTTSILRSRRDDARILITSS 218
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
Y ++R+ L F+ FGI+ + ++ A +P +N TE AL E IGI
Sbjct: 219 YQMRRALLDFRRFGIDPQPVFANRREAQTGWLPRWSNVVATEFALHELIGI 269
>gi|189350313|ref|YP_001945941.1| hypothetical protein BMULJ_01475 [Burkholderia multivorans ATCC
17616]
gi|189334335|dbj|BAG43405.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
Length = 238
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 123/231 (53%), Gaps = 11/231 (4%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI-GWGIIPTILLKHLQFSYQRPLLSPQW 62
S++ L + + LLC+ R+ ++ L + GW P I P+ P
Sbjct: 6 SFVLLFIGF--LLCRKQRRRIALAAVALFWLIASGWLAAPFIAWAEAGVE---PVEHPDM 60
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++++LG GT + P +RI + LY+SC++ + CT+++SGGD
Sbjct: 61 HGQ-TVLIVLGAGTQRADD----GLRPPRDGAARIRKAAELYRSCRRQAERCTVVMSGGD 115
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
PQ HG E+ VY L+ +GV+ D+ LE +S T++NAQF++S++++ + IL++S+
Sbjct: 116 PQHHGDTEAAVYGRGLVAAGVDPGDLVLEPKSRTTYENAQFTTSILRSRRDDARILITSS 175
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
Y ++R+ L F+ FGI+ + ++ A +P +N TE AL E IGI
Sbjct: 176 YQMRRALLDFRRFGIDPQPVFANRREAQTGWLPRWSNVVATEFALHELIGI 226
>gi|221197747|ref|ZP_03570793.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221204695|ref|ZP_03577712.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221214890|ref|ZP_03587858.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221165117|gb|EED97595.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221175552|gb|EEE07982.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221181679|gb|EEE14080.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
Length = 238
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 124/231 (53%), Gaps = 11/231 (4%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI-GWGIIPTILLKHLQFSYQRPLLSPQW 62
S++ L + + LLC+ R+ ++ L + GW P + P+ P
Sbjct: 6 SFVLLFIGF--LLCRKQRRRIALAAVALFWLIASGWLAAPFVAWAEAGVE---PVEHPDM 60
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++++LG GT + P +RI + LY++C++ + CT+++SGGD
Sbjct: 61 HGQ-TVLIVLGAGTQRADD----GLRPPRDGAARIRKAAELYRTCRRQAERCTVVMSGGD 115
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
PQ HG E+ VY L+ +G++ D+ LE +S T++NAQF++S++++ + IL++S+
Sbjct: 116 PQHHGDTEAAVYGRGLVAAGIDPGDLVLEPKSRTTYENAQFTTSILRSRRDDARILITSS 175
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
Y ++R+ L F+ FGI+ + ++ A+ +P +N ELAL E IGI
Sbjct: 176 YQMRRALLDFRRFGIDPQPVFANRREAHTGWLPRWSNVVAAELALHELIGI 226
>gi|171318455|ref|ZP_02907610.1| protein of unknown function DUF218 [Burkholderia ambifaria MEX-5]
gi|171096369|gb|EDT41271.1| protein of unknown function DUF218 [Burkholderia ambifaria MEX-5]
Length = 224
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 119/221 (53%), Gaps = 11/221 (4%)
Query: 15 LLCQSIRKIFFMSCFMLLFSF-IGWGIIPTILLKHLQFS-YQRPLLSPQWKKDGNIIVLL 72
+LC+ R+ ++ +L + GW P I + +RP + + +++L
Sbjct: 1 MLCRKRRRQIAIAGVVLFWLLATGWLAAPLIAWTEAGVTPVERPDMHGR-----TTLIIL 55
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G GT T +R P ++ RI +T LY++C Q + CT+++SGGDPQ HG E+
Sbjct: 56 GIGTRRGDT--GLRAPPDGEA--RIRKTAALYRTCLQQATRCTVVMSGGDPQHHGETEAA 111
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
VY +L+E GV D+ LE S T++NA+F++S++++ ILV+S+Y ++R+ L F
Sbjct: 112 VYGRRLVEEGVAPGDLVLEPNSRTTYENAKFTASILRSQHDDTRILVASSYQMRRALLDF 171
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+HFGI+ + S+ A +P N AL E +GI
Sbjct: 172 RHFGIDPQPVYSNRRRARMGWLPRRDNLENANRALHELVGI 212
>gi|254252544|ref|ZP_04945862.1| hypothetical protein BDAG_01779 [Burkholderia dolosa AUO158]
gi|124895153|gb|EAY69033.1| hypothetical protein BDAG_01779 [Burkholderia dolosa AUO158]
Length = 303
Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 122/231 (52%), Gaps = 11/231 (4%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSF-IGWGIIPTILLKHLQFSYQRPLLSPQW 62
S++ L + + +LC+ R+ ++ L + GW P I + P+ P+
Sbjct: 71 SFVLLFICF--MLCRKQRRFIAIAAVALFWLLSAGWLAAPLIAWAEAGVT---PVERPEM 125
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ ++L+G GT T ++P +RI + LY++C+Q + HCT+++SGGD
Sbjct: 126 RGQ-TTLILIGAGTHRTGTG----LQPPPDGNARIVKIAALYRACRQRAAHCTVVMSGGD 180
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
PQ HG E+ VY +L+ G+ D+ LE S T++NA+F++S++++ ILV+S+
Sbjct: 181 PQHHGETEAAVYGRQLVAEGIAPADLVLEPNSRTTYENAKFTASILRSRHDDARILVTSS 240
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
Y ++R+ L F+ FGI+ + ++ +P N + AL E IGI
Sbjct: 241 YQMRRALLDFRRFGIDPQPVYANRRTPRTGWLPRWRNLVNADQALHELIGI 291
>gi|170702081|ref|ZP_02892995.1| protein of unknown function DUF218 [Burkholderia ambifaria
IOP40-10]
gi|170133010|gb|EDT01424.1| protein of unknown function DUF218 [Burkholderia ambifaria
IOP40-10]
Length = 224
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 117/222 (52%), Gaps = 13/222 (5%)
Query: 15 LLCQSIRK---IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+LC+ R+ I ++ F LL + GW P I + P+ P +I L
Sbjct: 1 MLCRKRRRQIAIAGVAVFWLLAT--GWLAAPLIAWTEAGVT---PVEHPDMHGRTTLITL 55
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G GT T +R P ++ RI +T LY++C Q + CT+++SGGDPQ HG E+
Sbjct: 56 -GIGTRRGET--GLRAPPDGEA--RIRKTAALYRTCLQQATRCTVVMSGGDPQHHGETEA 110
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
VY +L+ GV D+ LE S T++NA+F++S++++ ILV+S+Y ++R+ L
Sbjct: 111 AVYGRRLVAEGVAPGDLVLEPNSRTTYENAKFTASILRSQHDDTRILVASSYQMRRALLD 170
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
F+HFGI+ + S+ A +P N AL E +GI
Sbjct: 171 FRHFGIDPQPVYSNRRRAQLGWLPRWRNLEDANQALHELVGI 212
>gi|170696469|ref|ZP_02887595.1| protein of unknown function DUF218 [Burkholderia graminis C4D1M]
gi|170138622|gb|EDT06824.1| protein of unknown function DUF218 [Burkholderia graminis C4D1M]
Length = 239
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 121/233 (51%), Gaps = 12/233 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL-LSP 60
LL+ F ++ W ++ R + F + + GW P + L Q P +P
Sbjct: 6 LLALFFAAIAIWK---RARRPLLFCTIAIFWLLSAGWLTAPLLSLAQPQAQTSTPARFAP 62
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IVLLG GT + + + P + +RI + + Y +CK+ + C++I+SG
Sbjct: 63 R-----TAIVLLGGGT--VYNRDKVLVPPR-EVLARIAVSAKNYAACKRSATVCSVIVSG 114
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G+PQ+H E+ Y LL V R DI LE QSL T++NA+ S+++ + ++ILV+
Sbjct: 115 GNPQRHAATEADTYLPYLLREQVPRSDIVLENQSLTTYENARNVSAIVGQSRYDSLILVT 174
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
SAYH+ R+ L F+HFG+ + S A ++P +N E+AL E IGI
Sbjct: 175 SAYHMPRAMLDFRHFGLEPQPLISSARRARLGVLPRYSNLANAEIALHELIGI 227
>gi|134295565|ref|YP_001119300.1| hypothetical protein Bcep1808_1457 [Burkholderia vietnamiensis G4]
gi|134138722|gb|ABO54465.1| protein of unknown function DUF218 [Burkholderia vietnamiensis G4]
Length = 224
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 119/222 (53%), Gaps = 13/222 (5%)
Query: 15 LLCQSIRK---IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+LC+ R+ I + F LL + GW P I + P+ P +IVL
Sbjct: 1 MLCRKQRRHIAIAGAAVFWLLAT--GWLAAPLIAWSEAGVA---PVEHPDMHGRTTLIVL 55
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
GT + +R P ++ RI +T LY+ C++ ++ CT+++SGGDPQ+HG E+
Sbjct: 56 ---GTGTRRSDNGLRPPPDGEA--RIRKTAALYRVCREQTIRCTVVMSGGDPQRHGDTEA 110
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
VY LL GV D+ LE S T++NA+F++S++++ + ILV+S+Y ++R+ L
Sbjct: 111 AVYGRLLLAQGVAPADLILEPDSRTTYENAKFTASILRSQHDDSRILVTSSYQMRRALLD 170
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
F+HFGI+ + ++ A ++P N A+ E IGI
Sbjct: 171 FRHFGIDPQPVYANRRLAQCGLLPRWRNLAAANQAVHELIGI 212
>gi|107022563|ref|YP_620890.1| hypothetical protein Bcen_1009 [Burkholderia cenocepacia AU 1054]
gi|116689512|ref|YP_835135.1| hypothetical protein Bcen2424_1490 [Burkholderia cenocepacia
HI2424]
gi|105892752|gb|ABF75917.1| protein of unknown function DUF218 [Burkholderia cenocepacia AU
1054]
gi|116647601|gb|ABK08242.1| protein of unknown function DUF218 [Burkholderia cenocepacia
HI2424]
Length = 224
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 116/222 (52%), Gaps = 13/222 (5%)
Query: 15 LLCQSIRK---IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+LC+ R+ I + F LL + GW P I + P+ P ++L
Sbjct: 1 MLCRKQRRTISIVAAALFWLLAT--GWLAAPLIAWSEAGVT---PVEHPD-MHGRTTLIL 54
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
+G GT T ++P +RI + LY++C+Q + CT+++SGGDPQ HG E+
Sbjct: 55 IGAGTHRTDT----GVQPPPDGVARIHKVAALYRTCRQQAERCTVVMSGGDPQHHGDTEA 110
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
VY +L+ GV D+ LE S T++NA+F++S++++ +LV+S+Y ++R+ L
Sbjct: 111 AVYGRQLVAEGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTSSYQMRRALLD 170
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
F+ FGI+ + ++ A +P N E AL E +GI
Sbjct: 171 FRRFGIDPQPVYANLRRAQTGWLPRWRNVANAEQALHELVGI 212
>gi|172060464|ref|YP_001808116.1| hypothetical protein BamMC406_1412 [Burkholderia ambifaria MC40-6]
gi|171992981|gb|ACB63900.1| protein of unknown function DUF218 [Burkholderia ambifaria MC40-6]
Length = 224
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 13/222 (5%)
Query: 15 LLCQSIRK---IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+LC+ R+ I + F LL + GW P I + P+ P +I L
Sbjct: 1 MLCRKRRRQIAIAGAAVFWLLAT--GWLAAPLIAWTEAGVT---PVEHPDMHGRTTLITL 55
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G GT T ++ P ++ RI T LY++C Q + CT+++SGGDPQ HG E+
Sbjct: 56 -GIGTRRGET--GLQAPPDGEA--RIRTTAALYRTCVQQATRCTVVMSGGDPQHHGETEA 110
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
VY +L+ GV D+ LE S T++NA+F++S++++ ILV+S+Y ++R+ L
Sbjct: 111 AVYGRRLVAEGVAPGDLVLEPNSRTTYENAKFTASILRSQHDDTRILVASSYQMRRALLD 170
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
F+HFGI+ + S+ A +P N AL E +GI
Sbjct: 171 FRHFGIDPQPVYSNRRRAQLGWLPRRDNLENANRALHELVGI 212
>gi|78066102|ref|YP_368871.1| hypothetical protein Bcep18194_A4631 [Burkholderia sp. 383]
gi|77966847|gb|ABB08227.1| protein of unknown function DUF218 [Burkholderia sp. 383]
Length = 224
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 115/220 (52%), Gaps = 9/220 (4%)
Query: 15 LLCQSIRKIFFMSCFMLLFSF-IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+LC+ R+I ++ L + GW P I + P+ P+ ++L+G
Sbjct: 1 MLCRKRRRIISIAAIALFWLLATGWLAAPLIAWTESGVA---PVEHPE-MHGRTTLILIG 56
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
GT ++P +RI + LY++C+Q + CT+++SGGDPQ HG E+ V
Sbjct: 57 AGTKRT----DFGLQPPPDGTARIHKVAALYRTCRQLAERCTVVMSGGDPQHHGETEAAV 112
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y +L+ G+ D+ LE S T++NA+F++S++++ ILV+S+Y ++R+ L F+
Sbjct: 113 YGRQLVAEGIAPTDLVLEPDSRTTYENAKFTASILRSQYDDARILVTSSYQMRRALLDFR 172
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
FGI+ + ++ A +P N E AL E +GI
Sbjct: 173 RFGIDPQPVYANRRRAQTGWLPRWRNLTNAEQALHELVGI 212
>gi|115351425|ref|YP_773264.1| hypothetical protein Bamb_1372 [Burkholderia ambifaria AMMD]
gi|115281413|gb|ABI86930.1| protein of unknown function DUF218 [Burkholderia ambifaria AMMD]
Length = 224
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 13/222 (5%)
Query: 15 LLCQSIRK---IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+LC+ R+ I + F LL + GW P I + P+ P +I L
Sbjct: 1 MLCRKRRRQIAIAGAAVFWLLAT--GWLAAPLIAWTEAGVT---PVEHPAMHGRTTLITL 55
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
G GT T ++ P ++ RI T LY++C Q + CT+++SGGDPQ HG E+
Sbjct: 56 -GIGTRRGET--GLQAPPDGEA--RIRTTAALYRTCVQQATRCTVVMSGGDPQHHGETEA 110
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
VY +L+ GV D+ LE S T++NA+F++S++++ ILV+S+Y ++R+ L
Sbjct: 111 AVYGRRLVAEGVAPGDLVLEPNSRTTYENAKFTASILRSQHDDTRILVASSYQMRRALLD 170
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
F+HFGI+ + S+ A +P N AL E +GI
Sbjct: 171 FRHFGIDPQPVYSNRRRAQLGWLPRRDNLENANRALHELVGI 212
>gi|170732816|ref|YP_001764763.1| hypothetical protein Bcenmc03_1466 [Burkholderia cenocepacia MC0-3]
gi|169816058|gb|ACA90641.1| protein of unknown function DUF218 [Burkholderia cenocepacia MC0-3]
Length = 260
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 122/233 (52%), Gaps = 15/233 (6%)
Query: 4 SWIFLIVSYWHLLCQSIRK---IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
S++ L + + +LC+ R+ I + F LL + GW P I + P+ P
Sbjct: 28 SFVLLFIGF--MLCRKQRRTISIVAAALFWLLAT--GWLAAPLIAWTEAGVT---PVEHP 80
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++L+G GT + ++P +RI + LY++C+Q + CT+++SG
Sbjct: 81 D-MHGRTTLILIGAGTHRTDS----GLQPPPDGVARIHKVAALYRTCRQQAERCTVVMSG 135
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ HG E+ VY +L+ GV D+ LE S T++NA+F++S++++ +LV+
Sbjct: 136 GDPQHHGDTEAAVYGRQLVAQGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVT 195
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
S+Y ++R+ L F+ FGI+ + ++ A +P N E AL E IGI
Sbjct: 196 SSYQMRRALLDFRRFGIDPQPVYANLRRAQTGWLPRWRNVANAEQALHELIGI 248
>gi|167562950|ref|ZP_02355866.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis EO147]
Length = 240
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 11/222 (4%)
Query: 15 LLCQSIR---KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
LLC+ R I +L GW P + L S RP+ P + IV+
Sbjct: 15 LLCRKRRGAIAILVAGVALLWLIASGWLAAPLVTLAE---SGVRPVARPTMTGN-TAIVM 70
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG G + A P+ + +RI +T LY +C++ + CT+++SGGDPQ G+ E+
Sbjct: 71 LGAGIKRRDGVAA----PTHDALARIDKTAELYSACQRTAARCTVVVSGGDPQFRGITEA 126
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
Y LL GV D+ E +S T++NA+F++++++ ++ILV+S+Y ++R+ L
Sbjct: 127 DTYARYLLARGVANGDLIREQRSHTTYENARFTAAILRAQHYDDLILVTSSYQMRRALLD 186
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
F FGI + ++ A + +P + N E AL E +GI
Sbjct: 187 FARFGIAPQPVYANRRVAQFGWLPRTGNLVNAEQALHEILGI 228
>gi|167582098|ref|ZP_02374972.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis TXDOH]
gi|257139318|ref|ZP_05587580.1| hypothetical protein BthaA_08969 [Burkholderia thailandensis E264]
Length = 240
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 116/220 (52%), Gaps = 7/220 (3%)
Query: 15 LLCQSIRKIF-FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
LLC+ R F ++ + L I G + L+ Q Q P+ P + IV+LG
Sbjct: 15 LLCRKRRGAFAILAAGIALLWLIASGWLAAPLVALAQAGVQ-PVTHPMMTGN-TAIVMLG 72
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + A P + +RI +T LY +C++ + CT+++SGGDPQ G+ E+
Sbjct: 73 AGIKRRDGVAA----PPHDALARIDKTAELYSACQRTAKRCTVVVSGGDPQVRGITEADT 128
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y LL GV D+ E+ S T++NA+F++ +++ ++ILV+S+Y +KR+ L F+
Sbjct: 129 YAPYLLARGVANADLIRESSSHTTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFR 188
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
FGI + ++ +A +P + N ELAL E IG+
Sbjct: 189 RFGIVPQPVYANRRDARLGWLPRAVNLVNAELALHEIIGV 228
>gi|167620257|ref|ZP_02388888.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis Bt4]
Length = 240
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 116/220 (52%), Gaps = 7/220 (3%)
Query: 15 LLCQSIRKIF-FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
LLC+ R F ++ + L I G + L+ Q Q P+ P + IV+LG
Sbjct: 15 LLCRKRRGAFAILTAGIALLWLIASGWLAAPLVALAQAGVQ-PVTHPMMTGN-TAIVMLG 72
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + A P + +RI +T LY +C++ + CT+++SGGDPQ G+ E+
Sbjct: 73 AGIKRRDGVAA----PPHDALARIDKTAELYSACQRTAKRCTVVVSGGDPQVRGITEADT 128
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y LL GV D+ E+ S T++NA+F++ +++ ++ILV+S+Y +KR+ L F+
Sbjct: 129 YAPYLLARGVANADLIRESSSHTTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFR 188
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
FGI + ++ +A +P + N ELAL E IG+
Sbjct: 189 RFGIVPQPVYANRRDARLGWLPRAVNLVNAELALHEIIGV 228
>gi|307730038|ref|YP_003907262.1| hypothetical protein BC1003_2008 [Burkholderia sp. CCGE1003]
gi|307584573|gb|ADN57971.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1003]
Length = 225
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 116/219 (52%), Gaps = 6/219 (2%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
++C+ R+ + C + F + G + LL Q Q P I+LLG
Sbjct: 1 MICKRARRPL-LYCTIAFFWLLSAGWLTAPLLSLAQPVAQ--TSPPASFAPRTAIILLGG 57
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
GT + + P + +RI + R Y +CK+ + CT+I+SGG+PQ+H +E+ Y
Sbjct: 58 GTVY--NRDKVLVPPR-EVLARIDVSARNYAACKRTATVCTVIVSGGNPQRHPASEADTY 114
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
LL V R DI LE QSL T++NA+ S+++ + ++ILV+SAYH+ R+ L F+H
Sbjct: 115 LPYLLREQVPRSDIVLENQSLTTYENARNVSAIVGQSRYDSLILVTSAYHMPRALLDFRH 174
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
FG++ + S A ++P +N E+AL E IGI
Sbjct: 175 FGLDPQPLISSARRARLGVLPRYSNLANAEIALHELIGI 213
>gi|206559863|ref|YP_002230627.1| hypothetical protein BCAL1497 [Burkholderia cenocepacia J2315]
gi|198035904|emb|CAR51796.1| putative exported protein [Burkholderia cenocepacia J2315]
Length = 238
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 121/233 (51%), Gaps = 15/233 (6%)
Query: 4 SWIFLIVSYWHLLCQSIRK---IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
S++ L + + +LC+ R+ I + F LL + GW P I + P+ P
Sbjct: 6 SFVLLFIGF--MLCRKRRRTISIVAAALFWLLAT--GWLAAPLIAWSEAGVT---PVEHP 58
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++L+G GT ++P +RI + LY++C+Q + CT+++SG
Sbjct: 59 D-MHGRTTLILIGAGTLRTDA----GLQPPPDGAARIRKIAALYRTCRQQAERCTVVMSG 113
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQ HG E+ VY +L+ GV D+ LE S T++NA+F++S++++ ILV+
Sbjct: 114 GDPQHHGDTEAAVYGRQLVAQGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARILVT 173
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
S+Y ++R+ L F+ FGI+ + ++ A +P N E AL E +GI
Sbjct: 174 SSYQMRRALLDFRRFGIDPQPVYANLRRAQTGWLPRWRNVANAEHALHELVGI 226
>gi|323525715|ref|YP_004227868.1| hypothetical protein BC1001_1372 [Burkholderia sp. CCGE1001]
gi|323382717|gb|ADX54808.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1001]
Length = 239
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 120/233 (51%), Gaps = 12/233 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL-LSP 60
LL+ F + W ++ R + F + + GW P + L Q P +P
Sbjct: 6 LLALFFAAILIWK---RARRPLVFCTVALFWLLSTGWLTAPLLSLAQPQAETSAPTRFAP 62
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I+LLG GT + + + P + +RI + Y +CK+ + C++I+SG
Sbjct: 63 R-----TAIILLGGGT--VYNRDKVLVPPR-EVMARIAVSAENYAACKRSATVCSVIVSG 114
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G+PQ+H E+ Y LL V R DI LE +SL T++NA+ S+++ + ++ILV+
Sbjct: 115 GNPQRHPATEADTYLPYLLREQVPRSDIVLENRSLTTYENARNVSAIVGQSRYDSLILVT 174
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
SAYH+ R+ L F+HFG+ + S A+ ++P +N ELAL E +GI
Sbjct: 175 SAYHMPRALLDFRHFGLEPQPLISGARRAHLGLLPRYSNLANAELALHELVGI 227
>gi|83720198|ref|YP_443090.1| hypothetical protein BTH_I2573 [Burkholderia thailandensis E264]
gi|83654023|gb|ABC38086.1| Uncharacterized ACR, COG1434 family [Burkholderia thailandensis
E264]
Length = 301
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 116/220 (52%), Gaps = 7/220 (3%)
Query: 15 LLCQSIRKIF-FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
LLC+ R F ++ + L I G + L+ Q Q P+ P + IV+LG
Sbjct: 76 LLCRKRRGAFAILAAGIALLWLIASGWLAAPLVALAQAGVQ-PVTHPMMTGN-TAIVMLG 133
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + A P + +RI +T LY +C++ + CT+++SGGDPQ G+ E+
Sbjct: 134 AGIKRRDGVAA----PPHDALARIDKTAELYSACQRTAKRCTVVVSGGDPQVRGITEADT 189
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y LL GV D+ E+ S T++NA+F++ +++ ++ILV+S+Y +KR+ L F+
Sbjct: 190 YAPYLLARGVANADLIRESSSHTTYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFR 249
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
FGI + ++ +A +P + N ELAL E IG+
Sbjct: 250 RFGIVPQPVYANRRDARLGWLPRAVNLVNAELALHEIIGV 289
>gi|167570139|ref|ZP_02363013.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis C6786]
Length = 240
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 113/222 (50%), Gaps = 11/222 (4%)
Query: 15 LLCQSIR---KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
LLC+ R I +L GW P + L S RP+ P + IV+
Sbjct: 15 LLCRKRRGAIAILVAGVALLWLIASGWLAAPLVALAE---SGVRPVARPTMTGN-TAIVM 70
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG G + A P+ + +RI +T LY +C++ + CT+++SGGDPQ G+ E+
Sbjct: 71 LGAGIKRRDGVAA----PTHDALARIDKTAELYSACQRTAARCTVVVSGGDPQFRGITEA 126
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
Y LL GV D+ E +S T++NA+F++++++ ++ILV+S+Y ++R+ L
Sbjct: 127 DTYARYLLARGVANGDLIREQRSHTTYENARFTAAILRAQHYDDLILVTSSYQMRRALLD 186
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
F FGI + ++ A +P + N E AL E +GI
Sbjct: 187 FARFGIAPQPVYANRRVAQLGWLPRTGNLVNAEQALHEILGI 228
>gi|167836831|ref|ZP_02463714.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis MSMB43]
Length = 240
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 104/197 (52%), Gaps = 8/197 (4%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
GW P + L RP+ P D IV+LG G I + P + +R
Sbjct: 40 GWLAAPLVALAEAGV---RPVAHPAMTGD-TTIVMLGAG---IRRRDGAAVPPR-DALAR 91
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
I +T LY +C++ + CT+++SGGDPQ G+ E+ Y LL GV D+ E S
Sbjct: 92 IDKTAELYSACQRTAKRCTVVVSGGDPQMRGITEADTYAPYLLARGVAHADLIRERSSHT 151
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
T++NA+F+ +++ ++ILV+S+Y +KR+ L F+ FGI + ++ +A +P
Sbjct: 152 TYENARFTVPILRAQHYDDLILVTSSYQMKRALLDFERFGIVPQPVYANRRDAQLGWLPR 211
Query: 217 SANFYLTELALKEYIGI 233
+AN ELAL E +G+
Sbjct: 212 AANLVNAELALHEIVGV 228
>gi|312796171|ref|YP_004029093.1| integral membrane protein [Burkholderia rhizoxinica HKI 454]
gi|312167946|emb|CBW74949.1| Integral membrane protein [Burkholderia rhizoxinica HKI 454]
Length = 239
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 100/179 (55%), Gaps = 5/179 (2%)
Query: 56 PLLSPQWKKDGNI-IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
P SP + GN+ IVLLG+GT A R+ P F ++ RI + C+ C
Sbjct: 53 PAASPP-RYGGNVAIVLLGSGTEYDD---AHRLVPKFDAWRRIDAAAAQFILCRAQRAQC 108
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
T+++SGG+PQKH +E+ Y L+ GV +I LE SL+T++NA+ + ++++
Sbjct: 109 TLVVSGGNPQKHEHSEAANYQPHLVSHGVPAANIVLEPDSLNTYENARNTGAILRRHHYD 168
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
I+L++SAYHL R+ L F HFGI+ S+Y S P A+ T +A E+IG+
Sbjct: 169 QIVLITSAYHLPRALLDFHHFGIDVVPLASNYRWRRPSWRPHPAHVINTSIAWHEWIGL 227
>gi|254245595|ref|ZP_04938916.1| hypothetical protein BCPG_00305 [Burkholderia cenocepacia PC184]
gi|124870371|gb|EAY62087.1| hypothetical protein BCPG_00305 [Burkholderia cenocepacia PC184]
Length = 179
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 95/165 (57%), Gaps = 4/165 (2%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
++L+G GT T +P +RI + LY++C+Q + CT+++SGGDPQ HG
Sbjct: 7 LILIGAGTHRTDTG----AQPPPDGVARIHKVAALYRTCRQQAERCTVVMSGGDPQHHGD 62
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ VY +L+ GV D+ LE S T++NA+F++S++++ +LV+S+Y ++R+
Sbjct: 63 TEAAVYGRQLVAQGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTSSYQMRRA 122
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
L F+ FGI+ + ++ A +P N E AL E +GI
Sbjct: 123 LLDFRRFGIDPQPVYANLRRAQTGWLPRWRNVANAEQALHELVGI 167
>gi|182416277|ref|YP_001821343.1| hypothetical protein Oter_4472 [Opitutus terrae PB90-1]
gi|177843491|gb|ACB77743.1| protein of unknown function DUF218 [Opitutus terrae PB90-1]
Length = 263
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 102/191 (53%), Gaps = 4/191 (2%)
Query: 45 LLKHLQFSYQRPLL--SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + L S Q P PQ ++IVLLG+G + P + P + +YSRI
Sbjct: 62 LARWLARSLQEPAFFRKPQDFGGVSVIVLLGDGNIVQPN--SGEALPGWLAYSRIERAGE 119
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
LY+S C +I++G D G + VY +L GV DI++E + +T++ A+
Sbjct: 120 LYRSATASGAACRVIVTGDDSSDPGAVKEPVYVQRLRALGVPAGDIRVEGKGRNTYRQAE 179
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYL 222
+S ++K + I +V+S H+KR+ YF +FG++ SDY+ +++PL +NF +
Sbjct: 180 LTSEILKAERCDRIFMVTSGLHMKRALRYFLNFGVSAIPVASDYVTGNITLLPLGSNFAI 239
Query: 223 TELALKEYIGI 233
++AL +Y G+
Sbjct: 240 ADIALHQYAGL 250
>gi|186476497|ref|YP_001857967.1| hypothetical protein Bphy_1739 [Burkholderia phymatum STM815]
gi|184192956|gb|ACC70921.1| protein of unknown function DUF218 [Burkholderia phymatum STM815]
Length = 228
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 113/220 (51%), Gaps = 5/220 (2%)
Query: 15 LLCQSIRKIFFMSCFMLLFSF-IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+L ++ R + + +L ++ GW P + L ++P IVLLG
Sbjct: 1 MLLRNARTLIGTTTIVLFWAVGAGWLAQPLLDLAQRGAPPGGQTVAPATYAAHTAIVLLG 60
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
GT ++ P + +RI + LY CKQ S C +I+SGG+PQ+H E+
Sbjct: 61 TGTVHRDG----KLVPPRDAIARIAMSADLYARCKQVSSVCHVIVSGGNPQEHEATEADT 116
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y LL V R DI LE +S+ T++NA+ ++++ + +++LV+SAY + R+ L F
Sbjct: 117 YLPYLLREEVPRGDIILENRSMTTYENARNVAAILPDGYYGSLMLVTSAYQMPRALLNFH 176
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
FG+N S+ +A ++P NF+ E+AL E +GI
Sbjct: 177 RFGMNPLPVVSNTRHAKRGVLPRRENFFDAEIALHELVGI 216
>gi|167724440|ref|ZP_02407676.1| hypothetical protein BpseD_35802 [Burkholderia pseudomallei DM98]
Length = 143
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 83/126 (65%), Gaps = 2/126 (1%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
C I++SGGD +++G+ E+ VY + L+ G++ D+ E +S++T+QNAQF+ + +
Sbjct: 3 CKILVSGGDARRNGVPEASVYRDALVGVGIDAADVLSEPRSMNTWQNAQFTRVALDGYRA 62
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
++LV+S HL+RS LYF HFG+ A ++YL A +PL+ NF + +LAL EY+G
Sbjct: 63 DRVLLVTSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLG- 121
Query: 234 LIAYYR 239
IA YR
Sbjct: 122 -IARYR 126
>gi|187923614|ref|YP_001895256.1| hypothetical protein Bphyt_1622 [Burkholderia phytofirmans PsJN]
gi|187714808|gb|ACD16032.1| protein of unknown function DUF218 [Burkholderia phytofirmans PsJN]
Length = 262
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 116/233 (49%), Gaps = 12/233 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL-LSP 60
LL+ F + W + + IF ++ F LL + GW P + L + + P +P
Sbjct: 29 LLALFFAAIVLWKGARRPL-AIFTVAFFWLLAA--GWLTAPLLRLAQPHWRTEAPATFAP 85
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG GT + P +RI + Y +CK+ + C +I+SG
Sbjct: 86 R-----TAIIMLGGGTIYGA---GQVLMPPRDVLARIAASAEYYAACKRAADICHVIVSG 137
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G+PQ+H E+ Y LL V R DI LE +SL T++NA+ S ++ + ++IL++
Sbjct: 138 GNPQRHRATEADTYLPYLLRRQVPRADIVLENRSLTTYENARNVSGIVHGSRYDSLILIT 197
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
SAY + R+ L F FG+ + S+ + A ++P N E+AL E IGI
Sbjct: 198 SAYQMPRALLDFHRFGLTPQPMISNAIGARLGVLPRYDNLASAEIALHELIGI 250
>gi|76811194|ref|YP_333307.1| hypothetical protein BURPS1710b_1908 [Burkholderia pseudomallei
1710b]
gi|126441655|ref|YP_001058770.1| hypothetical protein BURPS668_1731 [Burkholderia pseudomallei 668]
gi|167738833|ref|ZP_02411607.1| hypothetical protein Bpse14_12248 [Burkholderia pseudomallei 14]
gi|167911178|ref|ZP_02498269.1| hypothetical protein Bpse112_11843 [Burkholderia pseudomallei 112]
gi|167919203|ref|ZP_02506294.1| hypothetical protein BpseBC_11665 [Burkholderia pseudomallei
BCC215]
gi|217423472|ref|ZP_03454973.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|254259791|ref|ZP_04950845.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
gi|76580647|gb|ABA50122.1| conserved hypothetical protein [Burkholderia pseudomallei 1710b]
gi|126221148|gb|ABN84654.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
gi|217393330|gb|EEC33351.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|254218480|gb|EET07864.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
Length = 240
Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 110/197 (55%), Gaps = 8/197 (4%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
GW P + L + +P+ P D +IV+LG G I + I P + +R
Sbjct: 40 GWLAAPLVALAQ---AGMQPVAHPTMTGD-TVIVMLGAG---IERRDGVAIPPR-DALAR 91
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
I +T LY +C++ ++ CT+++SGGDPQ G+AE+ Y LL GV D+ E +S
Sbjct: 92 IDKTAELYSACRRTALRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHT 151
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
T++NA+F++ +++ ++ILV+S+Y +KR+ L F+ FG + ++ +A +P
Sbjct: 152 TYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFGFAPQPVYANRRDARLGWLPR 211
Query: 217 SANFYLTELALKEYIGI 233
+AN ELAL E +G+
Sbjct: 212 AANLANAELALHEIVGV 228
>gi|167894539|ref|ZP_02481941.1| hypothetical protein Bpse7_12379 [Burkholderia pseudomallei 7894]
Length = 240
Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 110/197 (55%), Gaps = 8/197 (4%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
GW P + L + +P+ P D +IV+LG G I + I P + +R
Sbjct: 40 GWLAAPLVALAQ---AGMQPVAHPTMTGD-TVIVMLGAG---IERRDGVAIPPR-DALAR 91
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
I +T LY +C++ ++ CT+++SGGDPQ G+AE+ Y LL GV D+ E +S
Sbjct: 92 IDKTAELYSACRRTALRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHT 151
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
T++NA+F++ +++ ++ILV+S+Y +KR+ L F+ FG + ++ +A +P
Sbjct: 152 TYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFGFAPQPVYANRRDARLGWLPR 211
Query: 217 SANFYLTELALKEYIGI 233
+AN ELAL E +G+
Sbjct: 212 AANLANAELALHEIVGV 228
>gi|182413009|ref|YP_001818075.1| hypothetical protein Oter_1189 [Opitutus terrae PB90-1]
gi|177840223|gb|ACB74475.1| protein of unknown function DUF218 [Opitutus terrae PB90-1]
Length = 258
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLL-SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+F +G G + +L + LQ +R PQ ++IVLLG+G + + P
Sbjct: 48 VFILVGNGFLTRLLARSLQ---ERAFFQKPQDFGGVSVIVLLGDGHIV--ERGSGEALPG 102
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
+ +YSRI LY+S C +I++G D G A+ VY +L GV DI++
Sbjct: 103 WLAYSRIERACELYRSATATGAACRLIVTGDDISDLGTAKEPVYVQRLRALGVPVGDIRV 162
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E + +T++ A+ +S ++K+ + I +V+S H+KR+ YF++FG+ SDY+
Sbjct: 163 EGKGRNTYRQAELTSEILKSERYDRIFMVTSGLHMKRALRYFRNFGVRAIPVASDYVIGN 222
Query: 211 YSIIPLSANFYLTELALKEYIGI 233
+++PL +N + ++AL +Y G+
Sbjct: 223 ITLLPLGSNLAIADIALHQYAGL 245
>gi|296158762|ref|ZP_06841591.1| protein of unknown function DUF218 [Burkholderia sp. Ch1-1]
gi|295890967|gb|EFG70756.1| protein of unknown function DUF218 [Burkholderia sp. Ch1-1]
Length = 262
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 24/239 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL+ F + W ++ R + + + GW +P L HL P+
Sbjct: 29 LLALFFAAIVLWK---RARRPLAVCTAALFWLLAAGWLTVP---LLHLA--------QPR 74
Query: 62 WKKDG-------NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
W+ D I++LG GT + P +RI + + Y +CK+ + C
Sbjct: 75 WQTDTPARFAPRTAIIMLGGGTVYDDDHVLV---PPRDVLARIMASAQNYAACKRAAAIC 131
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+I+SGG+PQ+H E+ Y LL V R DI LE S T++NA+ S++++ +
Sbjct: 132 HVIVSGGNPQRHRATEADTYLPYLLRQQVPRADIVLENSSRTTYENARNVSAVLEGSRYD 191
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
++IL++SAY + R+ L F FG+ + S+ A+ ++P N E+AL E IGI
Sbjct: 192 SLILITSAYQMPRAMLDFHRFGLAPQPMISNARRAHLGVLPRYDNLVSAEIALHELIGI 250
>gi|295676250|ref|YP_003604774.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1002]
gi|295436093|gb|ADG15263.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1002]
Length = 262
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 106/216 (49%), Gaps = 25/216 (11%)
Query: 28 CFMLLFSFI--GWGIIPTILLKHLQF-SYQRPLLSPQWKKDGNIIVLLGNGT------TI 78
C + LF + GW P + L Q S + +P+ I+LLG GT +
Sbjct: 50 CMIALFWLLAAGWLTAPLLDLAQPQRQSAEAATFAPR-----TAIILLGGGTIYDHDHVL 104
Query: 79 IPTIPAI-RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+P + RIE S Q+Y+ +CK+ ++ C +I+SGG+PQ+H E+ Y
Sbjct: 105 VPPRDVLSRIEVSAQNYA----------ACKRTAIVCQVIVSGGNPQRHSATEADTYLPY 154
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
LL V R DI LE S T++NA+ S ++ +ILV+SAYH+ R+ L FQ FG+
Sbjct: 155 LLRQQVPRSDIVLEKSSRTTYENARNVSVIVGQSHYDKLILVTSAYHMPRALLDFQRFGV 214
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ S ++P N E+AL E IG+
Sbjct: 215 EPQPQISSARRVRLGVLPRFGNLVAAEIALHELIGL 250
>gi|53724817|ref|YP_102769.1| hypothetical protein BMA1073 [Burkholderia mallei ATCC 23344]
gi|67641348|ref|ZP_00440128.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
gi|121599410|ref|YP_992846.1| hypothetical protein BMASAVP1_A1516 [Burkholderia mallei SAVP1]
gi|124385403|ref|YP_001026188.1| hypothetical protein BMA10229_A0183 [Burkholderia mallei NCTC
10229]
gi|134282282|ref|ZP_01768987.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|167003067|ref|ZP_02268857.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
gi|167719831|ref|ZP_02403067.1| hypothetical protein BpseD_12495 [Burkholderia pseudomallei DM98]
gi|254178040|ref|ZP_04884695.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|254188599|ref|ZP_04895110.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|254199716|ref|ZP_04906082.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|254206038|ref|ZP_04912390.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|254358413|ref|ZP_04974686.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|52428240|gb|AAU48833.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|121228220|gb|ABM50738.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|124293423|gb|ABN02692.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
gi|134246320|gb|EBA46409.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|147749312|gb|EDK56386.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|147753481|gb|EDK60546.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|148027540|gb|EDK85561.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|157936278|gb|EDO91948.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|160699079|gb|EDP89049.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|238522267|gb|EEP85712.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
gi|243061318|gb|EES43504.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
Length = 240
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
GW P + L + +P+ P D +IV+LG G I + I P + +R
Sbjct: 40 GWLAAPLVALAQ---AGMQPVAHPTMTGD-TVIVMLGAG---IERRDGVAIPPR-DALAR 91
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
I +T LY +C++ + CT+++SGGDPQ G+AE+ Y LL GV D+ E +S
Sbjct: 92 IDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHT 151
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
T++NA+F++ +++ ++ILV+S+Y +KR+ L F+ FG + ++ +A +P
Sbjct: 152 TYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFGFAPQPVYANRRDARLGWLPR 211
Query: 217 SANFYLTELALKEYIGI 233
+AN ELAL E +G+
Sbjct: 212 AANLANAELALHEIVGV 228
>gi|53719541|ref|YP_108527.1| hypothetical protein BPSL1927 [Burkholderia pseudomallei K96243]
gi|126452373|ref|YP_001066022.1| hypothetical protein BURPS1106A_1753 [Burkholderia pseudomallei
1106a]
gi|167816053|ref|ZP_02447733.1| hypothetical protein Bpse9_12987 [Burkholderia pseudomallei 91]
gi|167824429|ref|ZP_02455900.1| hypothetical protein Bpseu9_12213 [Burkholderia pseudomallei 9]
gi|167845961|ref|ZP_02471469.1| hypothetical protein BpseB_11780 [Burkholderia pseudomallei B7210]
gi|226199704|ref|ZP_03795257.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242315371|ref|ZP_04814387.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|254179990|ref|ZP_04886589.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|254297823|ref|ZP_04965276.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|52209955|emb|CAH35927.1| putative exported protein [Burkholderia pseudomallei K96243]
gi|126226015|gb|ABN89555.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
gi|157807296|gb|EDO84466.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|184210530|gb|EDU07573.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|225928290|gb|EEH24324.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242138610|gb|EES25012.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
Length = 240
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
GW P + L + +P+ P D +IV+LG G I + I P + +R
Sbjct: 40 GWLAAPLVALAQ---AGMQPVAHPTMTGD-TVIVMLGAG---IERRDGVAIPPR-DALAR 91
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
I +T LY +C++ + CT+++SGGDPQ G+AE+ Y LL GV D+ E +S
Sbjct: 92 IDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHT 151
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
T++NA+F++ +++ ++ILV+S+Y +KR+ L F+ FG + ++ +A +P
Sbjct: 152 TYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFGFAPQPVYANRRDARLGWLPR 211
Query: 217 SANFYLTELALKEYIGI 233
+AN ELAL E +G+
Sbjct: 212 AANLANAELALHEIVGV 228
>gi|237812033|ref|YP_002896484.1| hypothetical protein GBP346_A1775 [Burkholderia pseudomallei
MSHR346]
gi|237506357|gb|ACQ98675.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
Length = 240
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
GW P + L + +P+ P D +IV+LG G I + I P + +R
Sbjct: 40 GWLAAPLVALAQ---AGMQPVAHPTMTGD-TVIVMLGAG---IERRDGVAIPPR-DALAR 91
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
I +T LY +C++ + CT+++SGGDPQ G+AE+ Y LL GV D+ E +S
Sbjct: 92 IDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHT 151
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
T++NA+F++ +++ ++ILV+S+Y +KR+ L F+ FG + ++ +A +P
Sbjct: 152 TYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFGFAPQPVYANRRDARPGWLPR 211
Query: 217 SANFYLTELALKEYIGI 233
+AN ELAL E +G+
Sbjct: 212 AANLANAELALHEIVGV 228
>gi|254197234|ref|ZP_04903656.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|169653975|gb|EDS86668.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
Length = 240
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
GW P + L + +P+ P D +IV+LG G I + I P + +R
Sbjct: 40 GWLAAPLVALAQ---AGMQPVAHPTMTGD-TVIVMLGAG---IERRDGVAIPPR-DALAR 91
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
I +T LY +C++ + CT+++SGGDPQ G+AE+ Y LL GV D+ E +S
Sbjct: 92 IDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHT 151
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
T++NA+F++ +++ ++ILV+S+Y +KR+ L F+ FG + ++ +A +P
Sbjct: 152 TYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFEWFGFAPQPVYANRRDARLGWLPR 211
Query: 217 SANFYLTELALKEYIGI 233
+AN ELAL E +G+
Sbjct: 212 AANLANAELALHEIVGV 228
>gi|167628013|ref|YP_001678513.1| hypothetical protein Fphi_1785 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167598014|gb|ABZ88012.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 231
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 113/213 (53%), Gaps = 18/213 (8%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIPT 81
+F+ +++ +G G+I IL K ++ L S K+ N I+LLG G
Sbjct: 28 YFVIIVTIIYYLVGNGVIGNILAKPIR------LESTDIKQCANTKAIILLGAGINQAFD 81
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
++EPS +Y RI +T +Y Q IIISGG P + L+E+ VY + L +
Sbjct: 82 ----KLEPSLSAYDRILKTAEVYNQYPQD-----IIISGGSPSGYKLSEAEVYADILYKL 132
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ + I+LE QS +T++NAQF+ +++ + L++ H +R++L F F INT
Sbjct: 133 GIPKSKIRLEKQSKNTYENAQFTKNILSD-HNNTYCLITGGIHYQRAKLIFDSFNINTIN 191
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
S L S +P + NFY+T+ + EY+GI+
Sbjct: 192 IASSKLAPEISFLPSAYNFYITQAIIHEYLGIV 224
>gi|238027594|ref|YP_002911825.1| hypothetical protein bglu_1g20120 [Burkholderia glumae BGR1]
gi|237876788|gb|ACR29121.1| Hypothetical protein bglu_1g20120 [Burkholderia glumae BGR1]
Length = 238
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI--GWGIIPTILLKHLQFSYQRPLLSPQWK 63
+F ++W R+ ++ + L + I GW P + L + P P +
Sbjct: 10 LFAAAAFWR-----TRRATLITLGLALLAGIATGWLTAPLVALAESGVAPAEP---PVFA 61
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
IIVL G G + + P +RI L+ +C++ CT+I++GGDP
Sbjct: 62 GRTAIIVL-GAGIKRHDGL----LVPPENGLARIARAAELHSACQRSGARCTVIVTGGDP 116
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+HG E+ +Y LLE GV D+ LE +S T++NAQ+++ ++ ILV+S+Y
Sbjct: 117 HRHGTTEADLYAPLLLERGVPPRDLTLERRSRTTYENAQYTAPILLAKHYDETILVTSSY 176
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++R+ L F FG+ + ++ A P NF AL E GI+
Sbjct: 177 QMRRALLDFARFGVTPQPVFANRDRAICGWRPRWTNFVTASRALHEIAGII 227
>gi|167902941|ref|ZP_02490146.1| hypothetical protein BpseN_11835 [Burkholderia pseudomallei NCTC
13177]
Length = 240
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 108/197 (54%), Gaps = 8/197 (4%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
GW P + L + +P+ P D +IV+LG G I + I P + +R
Sbjct: 40 GWLAAPLVALAQ---AGMQPVAHPTMTGD-TVIVMLGAG---IERRDGVAIPPR-DALAR 91
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
I +T LY +C++ + CT+++SGGDPQ +AE+ Y LL GV D+ E +S
Sbjct: 92 IDKTAELYSACRRTAQRCTVVVSGGDPQVRSIAEADTYAPYLLARGVASADLIREKRSHT 151
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
T++NA+F++ +++ ++ILV+S+Y +KR+ L F+ FG + ++ +A +P
Sbjct: 152 TYENARFTAPILRAQHYDDLILVTSSYQMKRALLDFERFGFAPQPVYANRRDARPGWLPR 211
Query: 217 SANFYLTELALKEYIGI 233
+AN ELAL E +G+
Sbjct: 212 AANLANAELALHEIVGV 228
>gi|190576332|ref|YP_001974177.1| putative exported lipoprotein [Stenotrophomonas maltophilia K279a]
gi|190014254|emb|CAQ47898.1| putative exported lipoprotein [Stenotrophomonas maltophilia K279a]
Length = 258
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
P YSR+ + Y +C++ C +++SGG AE+ VY +L+ GV +
Sbjct: 82 RPGLAGYSRLMAATQRYLACERTGESCVVLVSGGATAPDNAAEANVYARELIALGVPAEH 141
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I E S++T+QNA SS MI+ ++LV+S HL+RS +YF+HFG+ + SD L
Sbjct: 142 IIREHASVNTWQNASNSSRMIQR-DSVRVVLVTSGLHLRRSLIYFRHFGVVAEGLPSDRL 200
Query: 208 NAYYSIIPLSANFYLTELALKEYIGIL 234
A +P + N L E+ L EYIG+L
Sbjct: 201 RASPGWLPSAYNLLLIEVMLHEYIGVL 227
>gi|209521954|ref|ZP_03270620.1| protein of unknown function DUF218 [Burkholderia sp. H160]
gi|209497609|gb|EDZ97798.1| protein of unknown function DUF218 [Burkholderia sp. H160]
Length = 212
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQF-SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
++ F LL + GW P + L Q S +P+ I+LLG GT
Sbjct: 1 MIALFWLLAA--GWLTAPLLDLAQPQRQSAAAATFAPR-----TAIILLGGGTIYDDDNV 53
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ P SRI + R Y +CK+ + C +I+SGG+PQ+H E+ Y LL V
Sbjct: 54 LV---PPHDVLSRIEVSARNYAACKRTANICQVIVSGGNPQRHSATEADTYLPYLLRQQV 110
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
R DI LE S T++NA+ S+++ +ILV+SAYH+ R+ L FQ FG+ +
Sbjct: 111 ARSDIVLEKTSRTTYENARNVSAIVGQSHYDTLILVTSAYHMPRALLDFQCFGVEPQPQI 170
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGI 233
S A ++P N E+AL E G+
Sbjct: 171 SSARRARLGVLPRFENLLAAEIALHELAGL 200
>gi|91782979|ref|YP_558185.1| putative lipoprotein transmembrane [Burkholderia xenovorans LB400]
gi|91686933|gb|ABE30133.1| Putative lipoprotein transmembrane [Burkholderia xenovorans LB400]
Length = 225
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 6/219 (2%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+L + +R+ + C LF + G + LL Q Q +P I++LG
Sbjct: 1 MLWKRVRRPLAV-CTAALFWLLAAGWLTAPLLHLAQPRSQTD--APARFAPRTAIIMLGG 57
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
GT + P +RI + + Y +CK+ C +I+SGG+PQ+H E+ Y
Sbjct: 58 GTVYDDNHVLV---PPRDVLARITASAQNYAACKRAEATCHVIVSGGNPQRHSATEADTY 114
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
LL V R DI LE S T++NA+ S++++ + ++ILV+SAY + R+ L F
Sbjct: 115 LPYLLRQQVPRADIVLENSSRTTYENARNVSAILEGSRYDSLILVTSAYQMPRAMLDFHR 174
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
FG + S+ A ++P N E+AL E IGI
Sbjct: 175 FGFAPQPMISNARRARLGVLPRYDNLVSAEIALHELIGI 213
>gi|254877103|ref|ZP_05249813.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843124|gb|EET21538.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 231
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 112/213 (52%), Gaps = 18/213 (8%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIPT 81
+F+ +++ +G G+I IL K ++ L S K+ N I+LLG G
Sbjct: 28 YFVIIVTIIYYLVGNGLIANILAKPIR------LESTDIKQCANTKAIILLGAGINQAFD 81
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
++EPS +Y RI +T +Y Q IIISGG P + L+E+ VY + L +
Sbjct: 82 ----KLEPSLSAYDRILKTAEVYNQYPQD-----IIISGGSPSGYKLSEAEVYADILYKL 132
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ + I+LE QS +T++NAQF+ ++ + L++ H +R++L F F INT
Sbjct: 133 GIPKSKIRLEKQSKNTYENAQFTKKILSD-HNNTYCLITGGIHYQRAKLIFDSFNINTIN 191
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
S L S +P + +FY+T+ + EY+GI+
Sbjct: 192 IASSKLAPEISFLPSAYSFYITQAIIHEYLGII 224
>gi|241668569|ref|ZP_04756147.1| hypothetical protein FphipA2_07371 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 239
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 112/213 (52%), Gaps = 18/213 (8%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIPT 81
+F+ +++ +G G+I IL K ++ L S K+ N I+LLG G
Sbjct: 36 YFVIIVTIIYYLVGNGLIANILAKPIR------LESTDIKQCANTKAIILLGAGINQAFD 89
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
++EPS +Y RI +T +Y Q IIISGG P + L+E+ VY + L +
Sbjct: 90 ----KLEPSLSAYDRILKTAEVYNQYPQD-----IIISGGSPSGYKLSEAEVYADILYKL 140
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ + I+LE QS +T++NAQF+ ++ + L++ H +R++L F F INT
Sbjct: 141 GIPKSKIRLEKQSKNTYENAQFTKKILSD-HNNTYCLITGGIHYQRAKLIFDSFNINTIN 199
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
S L S +P + +FY+T+ + EY+GI+
Sbjct: 200 IASSKLAPEISFLPSAYSFYITQAIIHEYLGII 232
>gi|330816685|ref|YP_004360390.1| hypothetical protein bgla_1g17890 [Burkholderia gladioli BSR3]
gi|327369078|gb|AEA60434.1| hypothetical protein bgla_1g17890 [Burkholderia gladioli BSR3]
Length = 238
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE--PSFQSY 94
GW P + L P+ +P + IVLLG G I R E P +
Sbjct: 38 GWLAAPLVALAEAGVE---PVEAPTMRGH-TAIVLLGGG------IERRRGELVPPHDAL 87
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
SRI L+ C+ + C I+++GGDP HG++E+ +Y L E GV D+ LET+S
Sbjct: 88 SRIVRAAELHSVCQAIASQCDIVVTGGDPHHHGISEAQLYAPLLREHGVAERDLILETRS 147
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
T++NA++++ ++ ILV+S+Y ++R+ L F F I + ++ L
Sbjct: 148 RTTYENAKYTAPILLAQHYDATILVTSSYQMRRALLDFARFDIEPQPVYANQLRPILGWR 207
Query: 215 PLSANFYLTELALKEYIGIL 234
P+ NF AL E GI+
Sbjct: 208 PVWHNFVAASRALHEIAGIM 227
>gi|208779215|ref|ZP_03246561.1| conserved hypothetical protein [Francisella novicida FTG]
gi|208745015|gb|EDZ91313.1| conserved hypothetical protein [Francisella novicida FTG]
Length = 231
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIPT 81
+F+ +++ IG G++ TIL L+ S K N I+LLG G
Sbjct: 28 YFIVALTIVYYLIGNGVLGTILALPLKSE------STDIKACANTKGIILLGAGINDAFG 81
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
++EP+ +Y RI +T +Y Q IIISGG P L+E+ +Y + L +
Sbjct: 82 ----KLEPALSAYDRILKTAEVYHQYPQQ-----IIISGGAPFGEKLSEAEIYADVLDKL 132
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI-ILVSSAYHLKRSQLYFQHFGINTK 200
G+ + I LE S +T+QNA+F ++ M KN LV+ H KR+++ F F INT
Sbjct: 133 GIPKSKIILEKNSKNTYQNAEFIKKIL--MNDKNTYCLVTGGIHYKRAKIIFDKFAINTI 190
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ S I+P S NFY+T+ + EY+GI+ Y
Sbjct: 191 SIASSKFVPNIKILPNSYNFYITQNIVHEYLGIIRIY 227
>gi|254372782|ref|ZP_04988271.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570509|gb|EDN36163.1| conserved hypothetical protein [Francisella novicida GA99-3549]
Length = 231
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 110/217 (50%), Gaps = 20/217 (9%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIPT 81
+F+ +++ IG G++ TIL L+ S K N I+LLG G
Sbjct: 28 YFIVALTIVYYLIGNGVLGTILALPLKSE------STDIKACANTKGIILLGAGINDAFG 81
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
++EP+ +Y RI +T +Y QH IIISGG P L+E+ +Y + L +
Sbjct: 82 ----KLEPALSAYDRILKTAEVYH---QHPQQ--IIISGGAPFGEKLSEAEIYADLLDKL 132
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI-ILVSSAYHLKRSQLYFQHFGINTK 200
G+ + I LE S +T+QNA+F ++ M KN LV+ H KR+++ F F INT
Sbjct: 133 GIPKSKIILEKNSKNTYQNAEFIKKIL--MNDKNTYCLVTGGIHYKRAKIIFDKFAINTI 190
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ S I+P + NFY+T+ + EY+GI+ Y
Sbjct: 191 SIASSKFVPNIKILPNAYNFYITQNIVHEYLGIIRIY 227
>gi|239830956|ref|ZP_04679285.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239823223|gb|EEQ94791.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 272
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 111/226 (49%), Gaps = 13/226 (5%)
Query: 15 LLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSY----QRPLLSPQWKKDGNI 68
L C RK + ++ + I G+ P L+ LQ Y QRPL +D
Sbjct: 16 LFCFKWRKTGTVLIGLAVIFYGAIASGLAPDYLMNRLQSPYTSQLQRPL------EDNTA 69
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
++ G GT ++ +EP SY+ + + + C C I SG D G+
Sbjct: 70 FIIFGTGTQVVDERGQKAVEPLAFSYAPLLAAAAMNRQCVDKGFSCKFIASGADVSGTGV 129
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+E+ +L + G++ I L+ +S +++QN++ ++++++ ++ ++L+ +A L R
Sbjct: 130 SEATAIAVQLEKVGIDPASILLDEKSRNSWQNSKNTAAILREIRPARVVLLQAAPMLTRD 189
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYL-TELALKEYIGI 233
LY HFG+ + + +L ++ + +A ++L T++AL E IG+
Sbjct: 190 LLYLAHFGVKPEPVAAGFLTGSHTNMSSTALYFLVTDVALHEEIGL 235
>gi|118497421|ref|YP_898471.1| hypothetical protein FTN_0829 [Francisella tularensis subsp.
novicida U112]
gi|118423327|gb|ABK89717.1| conserved hypothetical membrane protein [Francisella novicida U112]
Length = 239
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIPT 81
+F+ +++ IG G++ TIL L+ S K N I+LLG G
Sbjct: 36 YFIVALTIVYYLIGNGVLGTILALPLKSE------STDIKACANTKGIILLGAGINDAFG 89
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
++EP+ +Y RI +T +Y Q IIISGG P L+E+ +Y + L +
Sbjct: 90 ----KLEPALSAYDRILKTAEVYHQYPQQ-----IIISGGAPFGEKLSEAEIYADVLDKL 140
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ + I LE S +T+QNA+F ++ N + LV+ H KR+++ F F INT +
Sbjct: 141 GIPKSKIILEKNSKNTYQNAEFIKKILINDK-NTYCLVTGGIHYKRAKIIFDKFAINTIS 199
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S I+P + NFY+T+ + EY+GI+ Y
Sbjct: 200 IASSKFVPNIKILPNAYNFYITQNIVHEYLGIIRIY 235
>gi|195536112|ref|ZP_03079119.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
gi|194372589|gb|EDX27300.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
Length = 241
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIPT 81
+F+ +++ IG G++ TIL L+ S K N I+LLG G
Sbjct: 38 YFIVALTIVYYLIGNGVLGTILALPLKSE------STDIKACANTKGIILLGAGINDAFG 91
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
++EP+ +Y RI +T +Y Q IIISGG P L+E+ +Y + L +
Sbjct: 92 ----KLEPALSAYDRILKTAEVYHQYPQQ-----IIISGGAPFGEKLSEAEIYADVLDKL 142
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ + I LE S +T+QNA+F ++ N + LV+ H KR+++ F F INT +
Sbjct: 143 GIPKSKIILEKNSKNTYQNAEFIKKILINDK-NTYCLVTGGIHYKRAKIIFDKFAINTIS 201
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S I+P + NFY+T+ + EY+GI+ Y
Sbjct: 202 IASSKFVPNIKILPNAYNFYITQNIVHEYLGIIRIY 237
>gi|328676916|gb|AEB27786.1| putative exported protein [Francisella cf. novicida Fx1]
Length = 231
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 16/215 (7%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+F+ +++ I G++ TIL L+ S + + + K I+LLG G
Sbjct: 28 YFIVALTIVYYLIANGVLGTILALPLK-SESTNIKACENTKG---IILLGAGINDAFG-- 81
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
++EP+ +Y RI +T +Y Q IIISGG P L+E+ +Y + L + G+
Sbjct: 82 --KLEPALSAYDRILKTAEVYHQYPQQ-----IIISGGAPFGEKLSEAEIYADVLDKLGI 134
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI-ILVSSAYHLKRSQLYFQHFGINTKAS 202
+ I LE S +T+QNA+F ++ M KN LV+ H KR+++ F F INT +
Sbjct: 135 PKSKIILEKNSKNTYQNAEFIKKIL--MNDKNTYCLVTGGIHYKRAKIIFDKFAINTISI 192
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S I+P S NFY+T+ + EY+GI+ Y
Sbjct: 193 ASSKFVPNIKILPNSYNFYITQNIVHEYLGIIRIY 227
>gi|153007464|ref|YP_001368679.1| hypothetical protein Oant_0119 [Ochrobactrum anthropi ATCC 49188]
gi|151559352|gb|ABS12850.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 277
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 105/212 (49%), Gaps = 3/212 (1%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I + + + I I+P L+ LQ +Y L + +D ++ G GT +
Sbjct: 26 IVLIGLAAIFYGAIASAILPDTLMSRLQSAYSSQLQT--QLEDNTAFIVFGMGTQTVDGD 83
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
+EP SY I + + + C + C I SG D G++E+ +L ++G
Sbjct: 84 GQKVVEPLAFSYGPILAAVAMNRQCVEKGFRCKFIASGADVAGTGVSEAASIATQLEKAG 143
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V+ + L+ +S +++QN++ +++++ ++ ++L+ +A +KR LY HFG+ +
Sbjct: 144 VDPASVLLDEKSRNSWQNSRNVAAILREIRPAKVVLLQAAPMMKRDLLYLAHFGVKPEPV 203
Query: 203 CSDYLNAYYSIIPLSANFYL-TELALKEYIGI 233
+ YL ++ + ++L T+LAL E IG+
Sbjct: 204 AAGYLTGSHTNMSSPGLYFLMTDLALHEEIGV 235
>gi|300777919|ref|ZP_07087777.1| protein of hypothetical function DUF218 [Chryseobacterium gleum
ATCC 35910]
gi|300503429|gb|EFK34569.1| protein of hypothetical function DUF218 [Chryseobacterium gleum
ATCC 35910]
Length = 216
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 85/141 (60%), Gaps = 2/141 (1%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
SYSR+ +LY + K ++ C I++SG K ++E+ ++ + GV DI E
Sbjct: 65 SYSRMVTAYQLYHAYKTNNQSCKILVSG--KGKGSMSEAELFRENFKKMGVADADIIKED 122
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
+S++T++NA++SS ++K M +I LV+S +H+KRS FQ FG++ + SD++ +
Sbjct: 123 KSMNTYENAKYSSRILKQMAPSSIDLVTSGFHMKRSVALFQTFGLHPVPNASDFITTEIT 182
Query: 213 IIPLSANFYLTELALKEYIGI 233
+IP S N T + LKE +GI
Sbjct: 183 LIPNSYNAAFTFVMLKEVLGI 203
>gi|330984301|gb|EGH82404.1| hypothetical protein PLA107_04649 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 244
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D +IV+LG G P + P++ + R+ + + +Y+ C+ S CT++ISGG
Sbjct: 61 DKQLIVVLGLGVEFQDGKPVV---PTY-ALPRLLKAIEVYRDCQTVS-QCTLLISGGPTG 115
Query: 125 KHGLAESIVYNNKLLESGVE-RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ L E+ VY +++L S + I+LE +S +T++NA+FSSS K LV+S
Sbjct: 116 ETTLTEAEVYQDRILHSAPDLAGHIELEAKSRNTWENARFSSSWAKAHGYGQARLVTSLL 175
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
H++RSQ YF HF T S+ + S +P + N + E+ + E IG+
Sbjct: 176 HMRRSQSYFAHFDFPTSPEYSEQVVGPTSWLPSAWNLAMVEVLIHEQIGL 225
>gi|332184005|gb|AEE26259.1| putative exported protein [Francisella cf. novicida 3523]
Length = 228
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIPT 81
+F+ +++ IG GI+ +IL L+ S K N I+LLG G
Sbjct: 28 YFIVAITIIYYLIGNGILGSILAIPLKSE------STDIKACANTKGIILLGAGINQAFG 81
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+++P+ +Y RI +T +Y Q IIISGG P +E+ +Y + L +
Sbjct: 82 ----KLQPALSAYDRILKTAEVYHQYPQQ-----IIISGGAPFGEKSSEAEIYADVLYKL 132
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ + I LE S +T+QNA+F M+ + + LV+S H KR+++ F F INT +
Sbjct: 133 GIPKSKIILEKNSKNTYQNAEFIKKMLVDDK-ITYCLVTSGIHYKRAKIIFDKFAINTIS 191
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S I+P + NFY+T+ + EY+GI+ Y
Sbjct: 192 IASSKFVPNIKILPNAYNFYITQNIIHEYLGIVKIY 227
>gi|310643123|ref|YP_003947881.1| protein of hypothetical function duf218 [Paenibacillus polymyxa
SC2]
gi|309248073|gb|ADO57640.1| Protein of hypothetical function DUF218 [Paenibacillus polymyxa
SC2]
Length = 249
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 20/199 (10%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF--QSYSRIFETM 101
+L++ L+ Y +PL GN+IV+LG G T P I + + + +R+
Sbjct: 58 VLIRSLEKQYPQPL-----TVQGNVIVVLGGGAT--EGTPDINGQGNLLGSAANRLLTAA 110
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
RL+++ I+ SGG E+ + +LL G+ DI +E +SL+T QNA
Sbjct: 111 RLHEAT-----GLPILFSGGQVFGDSGNEANIAQRQLLGLGIPAKDIFIENRSLNTQQNA 165
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIP 215
++S ++K Q ILV+SA+H+ R+ L FQ G+ T A +DYL + + P
Sbjct: 166 VYTSKILKQHQLTKPILVTSAFHMPRAALEFQRAGMQTTAYPTDYLASEKLSLYAAKLSP 225
Query: 216 LSANFYLTELALKEYIGIL 234
+ T ALKEY+GIL
Sbjct: 226 SAGAISTTGTALKEYLGIL 244
>gi|254369442|ref|ZP_04985454.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|157122392|gb|EDO66532.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 158
Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 84/153 (54%), Gaps = 8/153 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
++EP+ +Y RI +T +Y H IIISGG P L+E+ +Y + L + G+ +
Sbjct: 9 KLEPTLSAYDRILKTAEVY-----HQHLQQIIISGGAPFGEKLSEAEIYADVLDKLGIPK 63
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNI-ILVSSAYHLKRSQLYFQHFGINTKASCS 204
I LE S +T+QNA+F ++ M KN LV+ H KR+++ F F INT + S
Sbjct: 64 SKIILEKNSKNTYQNAEFIKKIL--MNDKNTYCLVTGGIHYKRAKIIFDKFAINTISIAS 121
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
I+P + NFY+T+ + EY+GI+ Y
Sbjct: 122 SKFVPNIKILPNAYNFYITQNIVHEYLGIIRIY 154
>gi|254370529|ref|ZP_04986534.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|151568772|gb|EDN34426.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
Length = 158
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 84/153 (54%), Gaps = 8/153 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
++EP+ +Y RI +T +Y H IIISGG P L+E+ +Y + L + G+ +
Sbjct: 9 KLEPALSAYDRILKTAEVY-----HQHPQQIIISGGAPFGEKLSEAEIYADVLDKLGILK 63
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNI-ILVSSAYHLKRSQLYFQHFGINTKASCS 204
I LE S +T+QNA+F ++ M KN LV+ H KR+++ F F INT + S
Sbjct: 64 SKIILEKNSKNTYQNAEFIKKIL--MNDKNTYCLVTGGIHYKRAKIIFDKFAINTISIAS 121
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
I+P + NFY+T+ + EY+GI+ Y
Sbjct: 122 SKFVPNIKILPNAYNFYITQNIVHEYLGIIRIY 154
>gi|115315002|ref|YP_763725.1| hypothetical protein FTH_1231 [Francisella tularensis subsp.
holarctica OSU18]
gi|167010037|ref|ZP_02274968.1| hypothetical protein Ftulh_04754 [Francisella tularensis subsp.
holarctica FSC200]
gi|115129901|gb|ABI83088.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
Length = 158
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 84/153 (54%), Gaps = 8/153 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
++EP+ +Y RI +T +Y H IIISGG P L+E+ +Y + L + G+ +
Sbjct: 9 KLEPALSAYDRILKTAEVY-----HQHLQQIIISGGAPFGEKLSEAEIYADVLDKLGIPK 63
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNI-ILVSSAYHLKRSQLYFQHFGINTKASCS 204
I LE S +T+QNA+F ++ M KN LV+ H KR+++ F F INT + S
Sbjct: 64 SKIILEKNSKNTYQNAEFIKKIL--MNDKNTYCLVTGGIHYKRAKIIFDKFTINTISIAS 121
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
I+P + NFY+T+ + EY+GI+ Y
Sbjct: 122 SKFVPNIKILPNAYNFYITQNIVHEYLGIIRIY 154
>gi|17988125|ref|NP_540759.1| hypothetical protein BMEI1842 [Brucella melitensis bv. 1 str. 16M]
gi|256045898|ref|ZP_05448772.1| hypothetical protein Bmelb1R_15424 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256112611|ref|ZP_05453532.1| hypothetical protein Bmelb3E_08010 [Brucella melitensis bv. 3 str.
Ether]
gi|256264843|ref|ZP_05467375.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260563183|ref|ZP_05833669.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265992310|ref|ZP_06104867.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994051|ref|ZP_06106608.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17983881|gb|AAL53023.1| putative membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|260153199|gb|EEW88291.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|262765032|gb|EEZ10953.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263003376|gb|EEZ15669.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263095299|gb|EEZ18926.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|326408125|gb|ADZ65190.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326537837|gb|ADZ86052.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 263
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 3/193 (1%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P L+ LQ Y L P +D + V+ G GT + +EP SY IF
Sbjct: 44 LPNFLMNRLQEPYSSKLAEPL--EDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAA 101
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
R Y C+ + CT I +G D G++E+ +L ++GV+ I + + + +
Sbjct: 102 ARFYHECQSSGVSCTFITTGADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTT 161
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSAN 219
A+ ++ ++ ++ ++++ A + R+ LY HFGI + + YL S S +
Sbjct: 162 ARNVAATLRELKPARVVVLQPAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLS 221
Query: 220 FYLTELALKEYIG 232
F +LAL E IG
Sbjct: 222 FLAMDLALNEEIG 234
>gi|148560500|ref|YP_001258145.1| hypothetical protein BOV_0103 [Brucella ovis ATCC 25840]
gi|254700918|ref|ZP_05162746.1| hypothetical protein Bsuib55_08674 [Brucella suis bv. 5 str. 513]
gi|254709259|ref|ZP_05171070.1| hypothetical protein BpinB_03136 [Brucella pinnipedialis B2/94]
gi|254716328|ref|ZP_05178139.1| hypothetical protein BcetM_07820 [Brucella ceti M13/05/1]
gi|256158803|ref|ZP_05456664.1| hypothetical protein BcetM4_07968 [Brucella ceti M490/95/1]
gi|261218109|ref|ZP_05932390.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261221336|ref|ZP_05935617.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261314677|ref|ZP_05953874.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316765|ref|ZP_05955962.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321044|ref|ZP_05960241.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261751433|ref|ZP_05995142.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261759222|ref|ZP_06002931.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265987836|ref|ZP_06100393.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265997296|ref|ZP_06109853.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|294851511|ref|ZP_06792184.1| hypothetical protein BAZG_00416 [Brucella sp. NVSL 07-0026]
gi|148371757|gb|ABQ61736.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|260919920|gb|EEX86573.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260923198|gb|EEX89766.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293734|gb|EEX97230.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261295988|gb|EEX99484.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303703|gb|EEY07200.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261739206|gb|EEY27202.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261741186|gb|EEY29112.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|262551764|gb|EEZ07754.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264660033|gb|EEZ30294.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|294820100|gb|EFG37099.1| hypothetical protein BAZG_00416 [Brucella sp. NVSL 07-0026]
Length = 263
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 3/193 (1%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P L+ LQ Y L P +D + V+ G GT + +EP SY IF
Sbjct: 44 LPNFLMNRLQEPYSSKLAEPL--EDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAA 101
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
R Y C+ + CT I +G D G++E+ +L ++GV+ I + + + +
Sbjct: 102 ARFYHECQSSGVSCTFITTGADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTT 161
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSAN 219
A+ ++ ++ ++ ++++ A + R+ LY HFGI + + YL S S +
Sbjct: 162 ARNVAATLRELKPARVVVLQPAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLS 221
Query: 220 FYLTELALKEYIG 232
F +LAL E IG
Sbjct: 222 FLAMDLALNEEIG 234
>gi|225851646|ref|YP_002731879.1| hypothetical protein BMEA_A0113 [Brucella melitensis ATCC 23457]
gi|225640011|gb|ACN99924.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
Length = 272
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 3/193 (1%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P L+ LQ Y L P +D + V+ G GT + +EP SY IF
Sbjct: 53 LPNFLMNRLQEPYSSKLAEPL--EDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAA 110
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
R Y C+ + CT I +G D G++E+ +L ++GV+ I + + + +
Sbjct: 111 ARFYHECQSSGVSCTFITTGADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTT 170
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSAN 219
A+ ++ ++ ++ ++++ A + R+ LY HFGI + + YL S S +
Sbjct: 171 ARNVAATLRELKPARVVVLQPAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLS 230
Query: 220 FYLTELALKEYIG 232
F +LAL E IG
Sbjct: 231 FLAMDLALNEEIG 243
>gi|225626650|ref|ZP_03784689.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254707196|ref|ZP_05169024.1| hypothetical protein BpinM_09538 [Brucella pinnipedialis
M163/99/10]
gi|254713318|ref|ZP_05175129.1| hypothetical protein BcetM6_08187 [Brucella ceti M644/93/1]
gi|256030782|ref|ZP_05444396.1| hypothetical protein BpinM2_09053 [Brucella pinnipedialis
M292/94/1]
gi|256254188|ref|ZP_05459724.1| hypothetical protein BcetB_07825 [Brucella ceti B1/94]
gi|256368571|ref|YP_003106077.1| hypothetical protein BMI_I109 [Brucella microti CCM 4915]
gi|260169686|ref|ZP_05756497.1| hypothetical protein BruF5_15273 [Brucella sp. F5/99]
gi|225618307|gb|EEH15350.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|255998729|gb|ACU47128.1| hypothetical protein BMI_I109 [Brucella microti CCM 4915]
Length = 272
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 3/193 (1%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P L+ LQ Y L P +D + V+ G GT + +EP SY IF
Sbjct: 53 LPNFLMNRLQEPYSSKLAEPL--EDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAA 110
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
R Y C+ + CT I +G D G++E+ +L ++GV+ I + + + +
Sbjct: 111 ARFYHECQSSGVSCTFITTGADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTT 170
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSAN 219
A+ ++ ++ ++ ++++ A + R+ LY HFGI + + YL S S +
Sbjct: 171 ARNVAATLRELKPARVVVLQPAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLS 230
Query: 220 FYLTELALKEYIG 232
F +LAL E IG
Sbjct: 231 FLAMDLALNEEIG 243
>gi|261755996|ref|ZP_05999705.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261745749|gb|EEY33675.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 263
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 3/193 (1%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P L+ LQ Y L P +D + V+ G GT + +EP SY IF
Sbjct: 44 LPNFLMSRLQEPYSSKLAEPL--EDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAA 101
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
R Y C+ + CT I +G D G++E+ +L ++GV+ I + + + +
Sbjct: 102 ARFYHECQSSGVSCTFITTGADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTT 161
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSAN 219
A+ ++ ++ ++ ++++ A + R+ LY HFGI + + YL S S +
Sbjct: 162 ARNVAATLRELKPARVVVLQPAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLS 221
Query: 220 FYLTELALKEYIG 232
F +LAL E IG
Sbjct: 222 FLAMDLALNEEIG 234
>gi|254718327|ref|ZP_05180138.1| hypothetical protein Bru83_02063 [Brucella sp. 83/13]
gi|265983286|ref|ZP_06096021.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306837219|ref|ZP_07470109.1| protein of unknown function DUF218 [Brucella sp. NF 2653]
gi|264661878|gb|EEZ32139.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306407678|gb|EFM63867.1| protein of unknown function DUF218 [Brucella sp. NF 2653]
Length = 263
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 3/193 (1%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P L+ LQ Y L P +D + V+ G GT + +EP SY IF
Sbjct: 44 LPNFLMNRLQEPYSSKLAEPL--EDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAA 101
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
R Y C+ + CT I +G D G++E+ +L ++GV+ I + + + +
Sbjct: 102 ARFYHECQSSGVSCTFITTGADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTT 161
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSAN 219
A+ ++ ++ ++ ++++ A + R+ LY HFGI + + YL S S +
Sbjct: 162 ARNVAATLRELKPARVVVLQPAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLS 221
Query: 220 FYLTELALKEYIG 232
F +LAL E IG
Sbjct: 222 FLAMDLALNEEIG 234
>gi|23501020|ref|NP_697147.1| hypothetical protein BR0106 [Brucella suis 1330]
gi|163842380|ref|YP_001626784.1| hypothetical protein BSUIS_A0110 [Brucella suis ATCC 23445]
gi|254705285|ref|ZP_05167113.1| hypothetical protein Bsuib36_15473 [Brucella suis bv. 3 str. 686]
gi|23346882|gb|AAN29062.1| conserved hypothetical protein [Brucella suis 1330]
gi|163673103|gb|ABY37214.1| protein of unknown function DUF218 [Brucella suis ATCC 23445]
Length = 272
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 3/193 (1%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P L+ LQ Y L P +D + V+ G GT + +EP SY IF
Sbjct: 53 LPNFLMSRLQEPYSSKLAEPL--EDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAA 110
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
R Y C+ + CT I +G D G++E+ +L ++GV+ I + + + +
Sbjct: 111 ARFYHECQSSGVSCTFITTGADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTT 170
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSAN 219
A+ ++ ++ ++ ++++ A + R+ LY HFGI + + YL S S +
Sbjct: 171 ARNVAATLRELKPARVVVLQPAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLS 230
Query: 220 FYLTELALKEYIG 232
F +LAL E IG
Sbjct: 231 FLAMDLALNEEIG 243
>gi|304309671|ref|YP_003809269.1| hypothetical protein HDN1F_00190 [gamma proteobacterium HdN1]
gi|301795404|emb|CBL43602.1| conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 256
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 116/224 (51%), Gaps = 22/224 (9%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
F+ +L+F+ + ++ L K L+ Y P+L P + ++IV+LG G +P P
Sbjct: 41 FLGLVVLVFASMP--LVAVGLWKSLEGRY--PILVPSEQPKADVIVVLGGGIA-LPEPP- 94
Query: 85 IRIEPSF-QSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVYNNKLLES- 141
++ P + R++ LY + K +++SGG + GL Y+ KLLE
Sbjct: 95 -QVVPDLNDAADRVWYAAELYHAGKAP----WVVVSGGQVFPRSGLESEAEYHRKLLERM 149
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN-TK 200
GV + I +E+ S DT NA ++++++ + + +LV+SA H+ R+ L F+H G++
Sbjct: 150 GVPAEAILVESASRDTAGNAMLTAALMRERKFQKALLVTSAAHMPRAVLLFEHAGVDVVP 209
Query: 201 ASCSDY-----LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
ASC + + ++P++ F TE AL E++ + YYR
Sbjct: 210 ASCDVHGVDMDVPLILKLLPVAWAFQDTERALHEWLAFV--YYR 251
>gi|299135177|ref|ZP_07028368.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
gi|298590154|gb|EFI50358.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
Length = 264
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 18/194 (9%)
Query: 60 PQWKKDG----NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
P W++ G IIVL G I P + A+R P S + E M + +
Sbjct: 70 PAWQESGRAPDGIIVL---GGAINPDLTAVRGAPEMNSSA---ERMTAAAVLARRFPNAK 123
Query: 116 IIISGGDPQK-HGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
I++SGG+ H L+ K LE GV D I +E +S T++NA+F+ +I + G
Sbjct: 124 IVLSGGNANPFHPLSTEAEVGRKFLEDLGVADDRIVMEGRSRTTYENAEFTRPLIHPVAG 183
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD-----YLNAYYSIIPLSANFYLTELALK 228
+ ++LV+SAYH+ R+ F+ G N +A D +++A + LS + A+
Sbjct: 184 ERLLLVTSAYHMPRAMGVFRAAGFNVEAYPVDWRTRGWVDAERPFLTLSGGLGRLDTAVH 243
Query: 229 EYIGILIAYYRGNR 242
E++G LI Y R
Sbjct: 244 EWVG-LIGYRLAGR 256
>gi|260567250|ref|ZP_05837720.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260156768|gb|EEW91848.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
Length = 263
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 3/193 (1%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P L+ LQ Y L P +D + V+ G GT + +EP SY IF
Sbjct: 44 LPNFLMSRLQEPYSSKLAEPL--EDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAA 101
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
Y C+ + CT I +G D G++E+ +L ++GV+ I + + + +
Sbjct: 102 AHFYHECQSSGVSCTFITTGADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTT 161
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSAN 219
A+ ++ ++ ++ ++++ A + R+ LY HFGI + + YL S S +
Sbjct: 162 ARNVAATLRELKPARVVVLQPAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLS 221
Query: 220 FYLTELALKEYIG 232
F +LAL E IG
Sbjct: 222 FLAMDLALNEEIG 234
>gi|256060248|ref|ZP_05450424.1| hypothetical protein Bneo5_07795 [Brucella neotomae 5K33]
Length = 272
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 3/193 (1%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P L+ LQ Y L P +D + V+ G GT + +EP Y IF
Sbjct: 53 LPNFLMNRLQEPYSSKLAEPL--EDNTVFVVFGLGTQTVNEQGHNTVEPLTFFYGSIFAA 110
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
R Y C+ + CT I +G D G++E+ +L ++GV+ I + + + +
Sbjct: 111 ARFYHECQSSGVSCTFITTGADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTT 170
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSAN 219
A+ ++ ++ ++ ++++ A + R+ LY HFGI + + YL S S +
Sbjct: 171 ARNVAATLRELKPARVVVLQPAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLS 230
Query: 220 FYLTELALKEYIG 232
F +LAL E IG
Sbjct: 231 FLAMDLALNEEIG 243
>gi|261324222|ref|ZP_05963419.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261300202|gb|EEY03699.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 263
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 3/193 (1%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P L+ LQ Y L P +D + V+ G GT + +EP Y IF
Sbjct: 44 LPNFLMNRLQEPYSSKLAEPL--EDNTVFVVFGLGTQTVNEQGHNTVEPLTFFYGSIFAA 101
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
R Y C+ + CT I +G D G++E+ +L ++GV+ I + + + +
Sbjct: 102 ARFYHECQSSGVSCTFITTGADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTT 161
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSAN 219
A+ ++ ++ ++ ++++ A + R+ LY HFGI + + YL S S +
Sbjct: 162 ARNVAATLRELKPARVVVLQPAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLS 221
Query: 220 FYLTELALKEYIG 232
F +LAL E IG
Sbjct: 222 FLAMDLALNEEIG 234
>gi|161618094|ref|YP_001591981.1| hypothetical protein BCAN_A0109 [Brucella canis ATCC 23365]
gi|161334905|gb|ABX61210.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
Length = 272
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 3/193 (1%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P L+ LQ Y L P +D + V+ G GT + +EP SY IF
Sbjct: 53 LPNFLMSRLQEPYSSKLAEPL--EDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAA 110
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
Y C+ + CT I +G D G++E+ +L ++GV+ I + + + +
Sbjct: 111 AHFYHECQSSGVSCTFITTGADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTT 170
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSAN 219
A+ ++ ++ ++ ++++ A + R+ LY HFGI + + YL S S +
Sbjct: 171 ARNVAATLRELKPARVVVLQPAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLS 230
Query: 220 FYLTELALKEYIG 232
F +LAL E IG
Sbjct: 231 FLAMDLALNEEIG 243
>gi|306842605|ref|ZP_07475254.1| protein of unknown function DUF218 [Brucella sp. BO2]
gi|306287250|gb|EFM58738.1| protein of unknown function DUF218 [Brucella sp. BO2]
Length = 263
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 3/193 (1%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P L+ LQ Y L P +D + V+ G GT + +EP SY IF
Sbjct: 44 LPNFLMNRLQEPYSSKLAEPL--EDNTVFVVFGLGTQTVNEQGHNTVEPLAFSYGSIFAA 101
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
R Y C+ + CT I +G D G++E+ +L ++GV+ I + + + +
Sbjct: 102 ARFYHECQSSGISCTFITTGADVAGTGVSEAASAAAELEKAGVDSQAIIQDDKPRNAWTT 161
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSAN 219
A+ ++ ++ ++ ++++ A + R+ LY HFGI + + YL S S +
Sbjct: 162 ARNVAATLRELKPARVVVLQPAPMMGRTLLYLAHFGIKPEPVATSYLTVNASTHFSTSLS 221
Query: 220 FYLTELALKEYIG 232
F +LAL E IG
Sbjct: 222 FLAMDLALHEEIG 234
>gi|260881233|ref|ZP_05403953.2| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
gi|260849348|gb|EEX69355.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
Length = 266
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSF--IGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
L V W L + K F L F+F + G++ + L+ +YQ P +
Sbjct: 36 LFVLAWWLWKKRGEKRAAAVLFALTFAFYLLCTGLVAEKTMGWLESAYQ-----PPERPA 90
Query: 66 GNIIVLLGNG----TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
G++I++LG G T + + P+ SR+ +RL Q + I++SGG
Sbjct: 91 GDVIIMLGGGAYSDTPDVDGTGTLCASPA----SRLLTAVRL-----QRQLDVPILLSGG 141
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ AE+ + L+ GV D I ET+S++T QNA+FS+ +++ + ILV+S
Sbjct: 142 QVYEDTGAEAKIAKRVLMSLGVPEDKILTETRSINTSQNARFSAEILRENGLSHPILVTS 201
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
A+H+KRS L F G+ + +DY+ A++ +
Sbjct: 202 AFHMKRSVLNFAKQGVAVEPFPTDYMVAHHPV 233
>gi|306844381|ref|ZP_07476971.1| protein of unknown function DUF218 [Brucella sp. BO1]
gi|306275194|gb|EFM56944.1| protein of unknown function DUF218 [Brucella sp. BO1]
Length = 263
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 3/193 (1%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P L+ LQ Y L P +D + V+ G GT + +EP SY IF
Sbjct: 44 LPNFLMNRLQEPYSSKLAEPL--EDNTVFVVFGLGTQTVNEQGHNIVEPLAFSYGSIFAA 101
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
R Y C+ + CT I +G D G++E+ +L ++GV+ I + + + +
Sbjct: 102 ARFYHECQSSGISCTFITTGADVAGTGVSEAASAAAELEKAGVDSQAIIQDDKPRNAWTT 161
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSAN 219
A+ ++ ++ ++ + ++++ A + R+ LY HFGI + + YL S S +
Sbjct: 162 ARNVAATLRELKPERVVVLQPAPMMGRTLLYLAHFGIKPEPVATSYLTVNASTHFSTSLS 221
Query: 220 FYLTELALKEYIG 232
F +LAL E IG
Sbjct: 222 FLAMDLALHEEIG 234
>gi|62289087|ref|YP_220880.1| hypothetical protein BruAb1_0103 [Brucella abortus bv. 1 str.
9-941]
gi|82699025|ref|YP_413599.1| hypothetical protein BAB1_0103 [Brucella melitensis biovar Abortus
2308]
gi|237814579|ref|ZP_04593577.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254696534|ref|ZP_05158362.1| hypothetical protein Babob28_02155 [Brucella abortus bv. 2 str.
86/8/59]
gi|256258668|ref|ZP_05464204.1| hypothetical protein Babob9C_15246 [Brucella abortus bv. 9 str.
C68]
gi|297247504|ref|ZP_06931222.1| hypothetical protein BAYG_00411 [Brucella abortus bv. 5 str. B3196]
gi|62195219|gb|AAX73519.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615126|emb|CAJ10059.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|237789416|gb|EEP63626.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|297174673|gb|EFH34020.1| hypothetical protein BAYG_00411 [Brucella abortus bv. 5 str. B3196]
Length = 272
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 3/193 (1%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P L+ LQ Y L P +D + V+ G GT + +EP S IF
Sbjct: 53 LPNFLMNRLQEPYSSKLAEPL--EDNTVFVVFGLGTQTVNEQGHNTVEPLTFSDGSIFAA 110
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
R Y C+ + CT I +G D G++E+ +L ++GV+ I + + + +
Sbjct: 111 ARFYHECQSSGVSCTFITTGADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTT 170
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSAN 219
A+ ++ ++ ++ ++++ A + R+ LY HFGI + + YL S S +
Sbjct: 171 ARNVAATLRELKPARVVVLQPAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLS 230
Query: 220 FYLTELALKEYIG 232
F +LAL E IG
Sbjct: 231 FLAMDLALNEEIG 243
>gi|189023362|ref|YP_001934130.1| hypothetical protein BAbS19_I00980 [Brucella abortus S19]
gi|254690416|ref|ZP_05153670.1| hypothetical protein Babob68_09644 [Brucella abortus bv. 6 str.
870]
gi|254694904|ref|ZP_05156732.1| hypothetical protein Babob3T_09632 [Brucella abortus bv. 3 str.
Tulya]
gi|254731447|ref|ZP_05190025.1| hypothetical protein Babob42_09674 [Brucella abortus bv. 4 str.
292]
gi|260546384|ref|ZP_05822124.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260755963|ref|ZP_05868311.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260759187|ref|ZP_05871535.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260760911|ref|ZP_05873254.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884984|ref|ZP_05896598.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261215238|ref|ZP_05929519.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|189018934|gb|ACD71656.1| hypothetical protein BAbS19_I00980 [Brucella abortus S19]
gi|260096491|gb|EEW80367.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260669505|gb|EEX56445.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671343|gb|EEX58164.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260676071|gb|EEX62892.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260874512|gb|EEX81581.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260916845|gb|EEX83706.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
Length = 263
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 3/193 (1%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P L+ LQ Y L P +D + V+ G GT + +EP S IF
Sbjct: 44 LPNFLMNRLQEPYSSKLAEPL--EDNTVFVVFGLGTQTVNEQGHNTVEPLTFSDGSIFAA 101
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
R Y C+ + CT I +G D G++E+ +L ++GV+ I + + + +
Sbjct: 102 ARFYHECQSSGVSCTFITTGADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTT 161
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSAN 219
A+ ++ ++ ++ ++++ A + R+ LY HFGI + + YL S S +
Sbjct: 162 ARNVAATLRELKPARVVVLQPAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLS 221
Query: 220 FYLTELALKEYIG 232
F +LAL E IG
Sbjct: 222 FLAMDLALNEEIG 234
>gi|206889829|ref|YP_002248307.1| hypothetical protein THEYE_A0462 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741767|gb|ACI20824.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 235
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 107/220 (48%), Gaps = 24/220 (10%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
IR + F S LL I + +LL L+ SY S K D + IV+LG G
Sbjct: 35 IRYLAFFSA--LLVYLISIEPVKDLLLYPLEKSY-----SVSEKLDADAIVILGGGVYSW 87
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ P S +R+F +Y+ K II+SGG + +++S L
Sbjct: 88 ASFPE-------DSSNRLFTGYLVYRKTK-----LPIIVSGGAVEGK-ISDSAAMAAMLK 134
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
E GVE I E +S DT QNA + + + K K +ILV+SAYH+KR+ +F+ G+
Sbjct: 135 EFGVEDSKIIEENKSRDTAQNALYVAKICKEKSFKKVILVTSAYHMKRAVKFFKQAGLEV 194
Query: 200 KASCSDYL--NAY--YSIIPLSANFYLTELALKEYIGILI 235
+D+ N Y YS +P NF L+ A++E+I +++
Sbjct: 195 LPYPADFKQSNHYNIYSFLPKFGNFALSSKAIREHIALIV 234
>gi|22299705|ref|NP_682952.1| hypothetical protein tlr2162 [Thermosynechococcus elongatus BP-1]
gi|22295889|dbj|BAC09714.1| tlr2162 [Thermosynechococcus elongatus BP-1]
Length = 263
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 115/252 (45%), Gaps = 31/252 (12%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+F IV +W Q+ + +LL G + L+ L+ Y L P
Sbjct: 24 VFAIVRFWRAPKQAAIALVIALTILLLS---GNDYVAATLIASLERQY----LPPHPMPK 76
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
IV+LG G + T P +E + + RI L++ + I+SGG
Sbjct: 77 AAAIVVLG-GAVVPQTAPRPWVEVT-EGGDRILYGAHLFRQGSDPYL----ILSGGRINW 130
Query: 126 HG----LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--NMQGKNIILV 179
G AE++ GV RD I LET SL+T+QNA ++++ MQGK ++LV
Sbjct: 131 LGETFQQAEAVDMAEIATTCGVPRDKILLETSSLNTYQNAVNVKALLEKHQMQGK-LLLV 189
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL-----------NAYYSIIPLSANFYLTELALK 228
+SAYH+ R+ F+ G++ + +DY N S+IP N +T +AL+
Sbjct: 190 TSAYHMPRAVAIFRRLGMDVIPAPTDYRYPTIARSPTWQNLLLSLIPNPYNVDITTIALR 249
Query: 229 EYIGILIAYYRG 240
EY G+LI RG
Sbjct: 250 EYQGLLIYRLRG 261
>gi|253584074|ref|ZP_04861272.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251834646|gb|EES63209.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 252
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
+ PL+S +D ++ +LLG G IIP + P+ + +RI +T + Y +
Sbjct: 67 EYPLISTVKLRDADVYILLGGG--IIPNSAGGNV-PAEGANTRIMKTAQFYNKYPKK--- 120
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
I +SGG P ++ +ES VY +L+ GV +DI +E +S +T +NA + M++ +
Sbjct: 121 --IYVSGGTPLQNKESESSVYKRELIGLGVPAEDIVIEEKSRNTKENAVYIKKMMEEAKE 178
Query: 174 KNIILVSSAYHLKRSQLYFQ--HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELA 226
K +L++SA+H+ RS F G+ + D++ ++ IP NF L
Sbjct: 179 KKAVLITSAFHMPRSVKTFDKGEEGLIFYPAPCDFMAKSETENFFDYIPKYVNFKKLGLL 238
Query: 227 LKEYIGILIAYYR 239
LKEYIG++ YY+
Sbjct: 239 LKEYIGMV--YYK 249
>gi|313672214|ref|YP_004050325.1| hypothetical protein Calni_0249 [Calditerrivibrio nitroreducens DSM
19672]
gi|312938970|gb|ADR18162.1| protein of unknown function DUF218 [Calditerrivibrio nitroreducens
DSM 19672]
Length = 238
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 122/245 (49%), Gaps = 34/245 (13%)
Query: 5 WIFL---IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
WIF+ I+ + L +FF + + LFS + IL+ ++ Y
Sbjct: 16 WIFIVGFILGGYFLKGFKRYLLFFFAVMLYLFSI---SPVKDILIYPIEKDYI------N 66
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K DG+IIV+LG G + E +F+ + FE K II+SGG
Sbjct: 67 LKCDGDIIVVLGGGVYGNGELS----EDAFKRVVKGFE--------KGRGGDKIIIVSGG 114
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILV 179
+ E+ V + L+ G+ +I ++ S DT +NA+F+ ++ K ++G ++IL+
Sbjct: 115 RVSESYPYEAEVMKDLLVTLGIREGNIIMDKDSKDTVENAKFTKKIVEEKGIKG-DVILI 173
Query: 180 SSAYHLKRSQLYFQHFGI-NTKASCSDY-LNAYYSI---IPLSANFYLTELALKEYIGIL 234
+SAYH+KR L F+ +G N A+ +D+ + YSI +P ++N ALKEY+GIL
Sbjct: 174 TSAYHMKRGILIFKKYGFDNICAAATDFKFDGVYSIYDFLPSASNLNTVSKALKEYLGIL 233
Query: 235 IAYYR 239
+YR
Sbjct: 234 --FYR 236
>gi|315122363|ref|YP_004062852.1| hypothetical protein CKC_03075 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495765|gb|ADR52364.1| hypothetical protein CKC_03075 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 85
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 44/53 (83%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
IG G+IP ILLK+LQF YQ PL SPQW+K+GNIIVLLGNGT IPT+P + IE
Sbjct: 5 IGSGLIPAILLKNLQFPYQTPLSSPQWEKEGNIIVLLGNGTEKIPTLPTVGIE 57
>gi|239617397|ref|YP_002940719.1| protein of unknown function DUF218 [Kosmotoga olearia TBF 19.5.1]
gi|239506228|gb|ACR79715.1| protein of unknown function DUF218 [Kosmotoga olearia TBF 19.5.1]
Length = 254
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 118/235 (50%), Gaps = 29/235 (12%)
Query: 20 IRKIFFMSCFML-LFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
++K+ S ++ LFS++ I T L +K L+ Y P + IV+LG G
Sbjct: 37 LQKMLSFSILIIGLFSYLLMSGIGTYLYVKPLETEYSVP--NASLLDTAEAIVVLGGGMI 94
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ-KHGLAESIVYNN 136
I P +EP + R+++ +++++ + II++GG P + L+ES V N
Sbjct: 95 IAP----YELEPGDHTLKRLYKAFQIHRATGK-----PIIVTGGTPMGRDSLSESEVMLN 145
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
LL G++ +D+ +E + +T +NA + + K + K I+LV+SA H+KRS F+ G
Sbjct: 146 TLLNWGIDENDVIVENSARNTNENAVRVAEICKEKKWKKIVLVTSAVHMKRSVESFEEQG 205
Query: 197 INTKASCSDYLNAYYSI-----IP----LSANFYLTELALKEYIGILIAYYRGNR 242
+N +DYL Y + +P L+AN + E+IGI+ +Y R
Sbjct: 206 LNVIPYPTDYLYDYTDLSWVDFLPGRDALTANLS----GIHEFIGII--WYNAKR 254
>gi|308070011|ref|YP_003871616.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
gi|305859290|gb|ADM71078.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
Length = 249
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 20/199 (10%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF--QSYSRIFETM 101
+L+ L+ Y +P G++IV+LG G T P I + + + +R+
Sbjct: 58 LLISSLEKQYPQP-----RTVQGDVIVVLGGGAT--QGTPDINGQGNLLGSAANRLLTAA 110
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
RL+++ I+ SGG E+ + +LL G+ DI +E +SL+T QNA
Sbjct: 111 RLHEAT-----GLPILFSGGQVFGDSGNEANIAQRQLLGLGIPAKDILIENRSLNTQQNA 165
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY------SIIP 215
++S +++ Q +LV+SA+H+ R+ L FQ G+ A +DYL + + P
Sbjct: 166 VYTSQILEKHQLTRPVLVTSAFHMPRAALEFQRAGVQAIAYPTDYLASEKLSLYAGKLSP 225
Query: 216 LSANFYLTELALKEYIGIL 234
+ T ALKEY+GIL
Sbjct: 226 SAGAMSTTGTALKEYLGIL 244
>gi|37523632|ref|NP_927009.1| hypothetical protein gll4063 [Gloeobacter violaceus PCC 7421]
gi|35214637|dbj|BAC92004.1| gll4063 [Gloeobacter violaceus PCC 7421]
Length = 260
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL----ESGVERDD 147
+S R+ RL+K+ K +++SGG+P H + ++ E GV
Sbjct: 104 ESSDRVLHAARLFKAGKA----PVVLMSGGNPPFHTRPDQPPEATQMAAFARELGVPAGA 159
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I E +S +TFQNA FS+ ++K + I+LV+SA H+ RS F+ G A+ +D
Sbjct: 160 ILTEERSWNTFQNAAFSAEVLKARRMTRILLVTSASHMPRSVAIFERAGFAVIAASTDVR 219
Query: 208 NA------YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ + +P +A + LALKE++G+L+ RG
Sbjct: 220 SGTDLDDWLLAWLPSAAALESSTLALKEWVGLLVYRLRG 258
>gi|317064197|ref|ZP_07928682.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
gi|313689873|gb|EFS26708.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
Length = 241
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 123/244 (50%), Gaps = 25/244 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG--WGIIPTILLKHL-QFSYQRPLLSPQW 62
IF+ + ++L + I+ S F+L+F +G G + + L + + +S
Sbjct: 10 IFIYIGLKNILNRRIK-----SGFLLIFIGVGTYLGTSDFFVDRFLFKLESEYSTISTVK 64
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++G++ +LLG G I+P + PS + +RI +T + Y + I ISGG
Sbjct: 65 LQEGDVYILLGGG--IVPNSAGGNV-PSEGANARIIKTAQFYNKYPKK-----IYISGGS 116
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
P ++ +ES VY +L+ G+ ++I +E +S +T +NA + M++ + K +L++SA
Sbjct: 117 PLQNKESESSVYKRELVALGIPSENIVIEEKSRNTRENALYIRKMMEGSKEKKAVLITSA 176
Query: 183 YHLKRSQLYFQ--HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILI 235
+H+ RS F G+ + D++ ++ IP NF + LKEYIG+L
Sbjct: 177 FHIPRSVKTFDDGEGGLIFYPAPCDFMAKKEAENFFDYIPEYTNFKKLGILLKEYIGML- 235
Query: 236 AYYR 239
YYR
Sbjct: 236 -YYR 238
>gi|188996942|ref|YP_001931193.1| protein of unknown function DUF218 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932009|gb|ACD66639.1| protein of unknown function DUF218 [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 242
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 113/241 (46%), Gaps = 25/241 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L IFLI++Y+ + + I S + I + LLK L+ +Q+P
Sbjct: 17 LFVLIFLIIAYFSRNNKRVLTISLASAISIYL--ISIEPVKDFLLKPLEAKFQQP----- 69
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
G++IV+LG G+ I E S + R+ L+K ++ II+SGG
Sbjct: 70 KNISGDVIVVLGGGSYNT----GILTEDSLK---RVLTGFVLHKR-----LNVPIILSGG 117
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ L ES + L E G+++ I + QS DT +NA F+ + K K +ILV+S
Sbjct: 118 SAITN-LPESEAMKSLLAELGIDKKMIFTDVQSRDTLENAFFTKKICKKYGYKTVILVTS 176
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAY 237
AYH+ RS + F+ G+N +D+ YS P + A++EYIG L AY
Sbjct: 177 AYHMPRSYMTFKQAGLNVIPYPTDFKMDKKYTVYSYFPKMNVLQDSTKAIREYIG-LFAY 235
Query: 238 Y 238
Y
Sbjct: 236 Y 236
>gi|257469971|ref|ZP_05634063.1| hypothetical protein FulcA4_11568 [Fusobacterium ulcerans ATCC
49185]
Length = 252
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 17/183 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
++G++ +LLG G I+P + PS + +RI +T + Y + I ISGG P
Sbjct: 77 QEGDVYILLGGG--IVPNSAGGNV-PSEGANARIIKTAQFYNKYPKK-----IYISGGSP 128
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
++ +ES VY +L+ G+ ++I +E +S +T +NA + M++ + K +L++SA+
Sbjct: 129 LQNKESESSVYKRELVALGIPSENIVIEEKSRNTRENALYIRKMMEGSKEKKAVLITSAF 188
Query: 184 HLKRSQLYFQ--HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
H+ RS F G+ + D++ ++ IP NF + LKEYIG+L
Sbjct: 189 HIPRSVKTFDDGEGGLIFYPAPCDFMAKKEAENFFDYIPEYTNFKKLGILLKEYIGML-- 246
Query: 237 YYR 239
YYR
Sbjct: 247 YYR 249
>gi|320161712|ref|YP_004174937.1| hypothetical protein ANT_23110 [Anaerolinea thermophila UNI-1]
gi|319995566|dbj|BAJ64337.1| hypothetical protein ANT_23110 [Anaerolinea thermophila UNI-1]
Length = 264
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 36/236 (15%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
++ F+LL S W + T L + L++ Y L + +V+LG GT P P
Sbjct: 42 LALFILLVSSNRW--VATTLARSLEWQY----LPNEPISSAPAMVVLGGGTE--PAFPP- 92
Query: 86 RIEPSFQSY-SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN-----KLL 139
R +P S R+ LY+ K +I+SGG+ G S ++ K+L
Sbjct: 93 RSQPEVNSAGDRVLYAAALYQQGKA----PLVIVSGGNVAFRGEQSSTPASDMRHLLKML 148
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV + I E QS +T++NA + + ++K + +ILV+SA H+ RS F+ GI
Sbjct: 149 --GVPPEAILEEDQSQNTYENALYCAKLLKERHIQRVILVTSALHMPRSVKLFEKQGIEV 206
Query: 200 KASCSDYLNAY---------------YSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +D+ + +++P S+N LT L EYIGIL+ + RG
Sbjct: 207 IPAPADFAVPFQEWEDLLHAPIPAQLVALLPSSSNLQLTTNVLHEYIGILVYWMRG 262
>gi|110633611|ref|YP_673819.1| hypothetical protein Meso_1258 [Mesorhizobium sp. BNC1]
gi|110284595|gb|ABG62654.1| protein of unknown function DUF218 [Chelativorans sp. BNC1]
Length = 268
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 19/229 (8%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN-GT 76
+ + F+ +L + IGW + + L L+ + RP +S I+VL G T
Sbjct: 37 RKVAGTLFVGTAAILLAVIGWSPLGSAALLALENRFPRPAIS---GPIAGIVVLGGEIDT 93
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ---KHGLAESIV 133
+ I + + + ++ E RLY + + I++SGG H E+ +
Sbjct: 94 DVSAERKTIALTDAAERLTKTAEFNRLYPNAR-------ILLSGGINDLLITHDRTEAAL 146
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L++ GV D I+LE +S +T +NA S ++ G+ +LV+SA+H+ R+ F+
Sbjct: 147 ARELLVKIGVPADRIELEERSRNTCENAIESKAVAAPKPGETWLLVTSAFHMPRAVGCFR 206
Query: 194 HFGINTKASCSDYL---NAYYSIIP-LSANFYLTELALKEYIGILIAYY 238
G DYL +A S+ P ++A YLT++A E++G L AYY
Sbjct: 207 AAGFPVLPYPVDYLARRSALSSLAPSVAAGLYLTDIAAHEWLG-LAAYY 254
>gi|94266695|ref|ZP_01290369.1| Protein of unknown function DUF218 [delta proteobacterium MLMS-1]
gi|93452658|gb|EAT03218.1| Protein of unknown function DUF218 [delta proteobacterium MLMS-1]
Length = 254
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 18/183 (9%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYS-RIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ IVLLG G +PA P + + R++ RLY + K II+SGG +
Sbjct: 80 ADFIVLLGGGVR---GVPADWPYPDLNAAADRVWHAPRLYHADKA----PLIIVSGGGKE 132
Query: 125 KHGL--AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
HG +E+ LL GV I+LE +S T +NA +++ ++ + ++LV+SA
Sbjct: 133 WHGERGSEAEAMRELLLAFGVPDGAIRLEDRSRSTRENALYTAPLVGE---RPVLLVTSA 189
Query: 183 YHLKRSQLYFQHFGINTKASCSDY---LNAYYS--IIPLSANFYLTELALKEYIGILIAY 237
H+ RS F+ GIN + +D+ +S ++P + + + + ALKEY+G+L+
Sbjct: 190 QHMPRSLATFRAVGINAVPAPTDFEVIPQPLHSLRLLPDAHSLHQSTSALKEYLGLLVYR 249
Query: 238 YRG 240
RG
Sbjct: 250 LRG 252
>gi|257058358|ref|YP_003136246.1| hypothetical protein Cyan8802_0454 [Cyanothece sp. PCC 8802]
gi|256588524|gb|ACU99410.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8802]
Length = 265
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 111/237 (46%), Gaps = 42/237 (17%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
+ +LL S W + + L++ L+ P++ PQ +IV+LG G T P P
Sbjct: 46 ALVILLISSNAW--VSSALIQSLEQQISPPVIIPQ----AEVIVVLG-GATKSPVKPRPM 98
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD--------PQKHGLAESIVYNNKL 138
++ + + R+F +LY K II SGG P+ +A+ L
Sbjct: 99 VDVN-EHGDRLFYAAKLYLDQKA----PLIIASGGRISWSGNSRPESEDMAQ-------L 146
Query: 139 LES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ GV I E SL+T++NA ++ N+ K ++LV+SA+HL R++L F+ GI
Sbjct: 147 LQMLGVPSQAIIQEPNSLNTYENAINVKQILDNLGIKKVLLVTSAFHLPRARLIFEKLGI 206
Query: 198 NTKASCSDYL-------NAYYSI-------IPLSANFYLTELALKEYIGILIAYYRG 240
N + +DY N SI +P + LT LALKEYIG I +G
Sbjct: 207 NVIGAPTDYFVTEIDETNNQTSIEGFILGLLPDAHRLSLTTLALKEYIGTFIYRLKG 263
>gi|268678711|ref|YP_003303142.1| hypothetical protein Sdel_0069 [Sulfurospirillum deleyianum DSM
6946]
gi|268616742|gb|ACZ11107.1| protein of unknown function DUF218 [Sulfurospirillum deleyianum DSM
6946]
Length = 261
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 36/256 (14%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
IF+++ ++ +L ++FF++ ++F + + LLK L+ Y +PL
Sbjct: 20 IFILLFFFAVLYAKKFRLFFLAN-AVVFYLLSNAYVADWLLKPLEEPYNQPL---HVTAV 75
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+IVL G T + +P S +Y R+ + + KS K ++ SGG K
Sbjct: 76 DAVIVLGGGHTQGVANLPL-----SSDAYKRMMWGLMVAKSHK-----LPLLFSGGGLYK 125
Query: 126 HGLAESIVYNNKLLESGVERD--------------DIKLETQSLDTFQNAQFSSSMIK-- 169
L ES + + L E D + +E +SLDT+QNAQFS + +
Sbjct: 126 EYL-ESDAFLDSLKELKSYLDIATPNSKSLATKEFSLHVEDKSLDTYQNAQFSKTAFEKA 184
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTE 224
+ G I LV+SAYH+KRS + ++HFG N + +++ + + +P + Y +
Sbjct: 185 GVMGPTIYLVTSAYHMKRSIMLYEHFGFNVIPAATNFKINHREKDGWDYLPSAHALYKSY 244
Query: 225 LALKEYIGILIAYYRG 240
+AL EY G+L RG
Sbjct: 245 IALHEYAGLLSLKLRG 260
>gi|218245322|ref|YP_002370693.1| hypothetical protein PCC8801_0441 [Cyanothece sp. PCC 8801]
gi|218165800|gb|ACK64537.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8801]
Length = 265
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 111/237 (46%), Gaps = 42/237 (17%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
+ +LL S W + + L++ L+ P++ PQ +IV+LG G T P P
Sbjct: 46 ALVILLISSNAW--VSSALIQSLEQQISPPVIIPQ----AEVIVVLG-GATKSPVKPRPM 98
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD--------PQKHGLAESIVYNNKL 138
++ + + R+F +LY K II SGG P+ +A+ L
Sbjct: 99 VDVN-EHGDRLFYAAKLYLDQKA----PLIIASGGRISWSGNSRPESEDMAQ-------L 146
Query: 139 LES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ GV I E SL+T++NA ++ N+ K ++LV+SA+HL R++L F+ GI
Sbjct: 147 LQMLGVPSQAIIQEPNSLNTYENAINVKQILDNLGIKKVLLVTSAFHLPRARLIFEKLGI 206
Query: 198 NTKASCSDYL-------NAYYSI-------IPLSANFYLTELALKEYIGILIAYYRG 240
N + +DY N SI +P + LT LALKEYIG I +G
Sbjct: 207 NVIGTPTDYFVTEIDETNNQTSIEGFILGLLPDAHRLSLTTLALKEYIGTFIYRLKG 263
>gi|163783486|ref|ZP_02178477.1| hypothetical protein HG1285_08734 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881250|gb|EDP74763.1| hypothetical protein HG1285_08734 [Hydrogenivirga sp. 128-5-R1-1]
Length = 239
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 101/190 (53%), Gaps = 18/190 (9%)
Query: 49 LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
L + + P +P+ + G++IV+LG G + A SY R+ L++
Sbjct: 58 LFYPLESPFKTPK-RIRGDVIVVLGGGAYNSGYLKA-------SSYKRLIAGFLLHRRTG 109
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ +I+SGG + E+ V LLE GVE DI + +S DT++NA++ ++
Sbjct: 110 K-----PLILSGGA-AIGVIPEAKVMKELLLEFGVEEKDIYADLRSRDTYENAKYVRNIC 163
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD--YLNAY--YSIIPLSANFYLTE 224
+ + ++I LV+SA+H++R+ + F+ G+ + +D + Y YS P + FY +
Sbjct: 164 EKIGCRSITLVTSAFHMRRALMVFKKTGLEVQPYPTDLKFEGRYNLYSAFPKYSVFYDSS 223
Query: 225 LALKEYIGIL 234
+A++EY+G+L
Sbjct: 224 IAIREYVGLL 233
>gi|119512087|ref|ZP_01631180.1| hypothetical protein N9414_07364 [Nodularia spumigena CCY9414]
gi|119463245|gb|EAW44189.1| hypothetical protein N9414_07364 [Nodularia spumigena CCY9414]
Length = 263
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 28/213 (13%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT-TIIPTIPAIRIEPSFQSYSRIFETMRL 103
L++ L++ Y L P + IV+LG T + P P + + ++ R+ +L
Sbjct: 60 LVRSLEWQY----LPPNPVPNAEAIVVLGGATKSAYPPRPTVDLS---ETGDRVIYAAQL 112
Query: 104 YKSCKQHSMHCTIIISGG--DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
Y+ K II+SGG D + G +ES N L G+ + I E SL+T+QNA
Sbjct: 113 YRQNKAP----IIILSGGRIDWRGGGESESADMANVLTSIGIPSEVIVQEPDSLNTYQNA 168
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-------------- 207
++++ ++LV+SA H+ RS FQ GIN A+ +D+L
Sbjct: 169 VNVKKILESRGIGKVLLVTSAMHMPRSIQIFQRQGINAIAAPTDFLVSQGELQELSSTPK 228
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
A +++P S N ALKEYIG + +RG
Sbjct: 229 AAILNLLPDSNNLQQFTSALKEYIGSFVYSWRG 261
>gi|224373337|ref|YP_002607709.1| hypothetical protein NAMH_1317 [Nautilia profundicola AmH]
gi|223588336|gb|ACM92072.1| conserved hypothetical protein [Nautilia profundicola AmH]
Length = 240
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 23/245 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L IF+I+ + + KI F S +LL++ I + LL L+ Y+ ++P
Sbjct: 12 LLPPGIFVIILFLAAIFAKKAKIVFFSAAVLLWA-ISTKFVANALLYPLEHGYKSDTITP 70
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ +V+LG GT + A+ + Y + KQ S+ I +G
Sbjct: 71 ------SAVVVLGGGTNSRDVLKAMPDAFKREVYGLLI--------AKQESL--PYIFTG 114
Query: 121 GDPQKHGLAESIVYNNKLLESGVERD-DIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIIL 178
G Q AE+I + ++ D + E +SL+TFQNA++++ + + + K I L
Sbjct: 115 GGIQNIKEAENIKKDIDMILKTCNCDIETFYENRSLNTFQNAKYTAKLFEKLNLSKKIYL 174
Query: 179 VSSAYHLKRSQLYFQHFG--INTKASCSDYLNAY--YSIIPLSANFYLTELALKEYIGIL 234
V+SAYH+KR+ + F +FG I K Y N Y + I P + NFY + A+ EY G++
Sbjct: 175 VTSAYHMKRAIMIFNNFGFQIIPKPVGFYYDNEYTFWDIFPNAGNFYHSYKAIHEYFGLI 234
Query: 235 IAYYR 239
Y R
Sbjct: 235 KTYLR 239
>gi|310780398|ref|YP_003968730.1| protein of unknown function DUF218 [Ilyobacter polytropus DSM 2926]
gi|309749721|gb|ADO84382.1| protein of unknown function DUF218 [Ilyobacter polytropus DSM 2926]
Length = 252
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 42 PTI-LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
PT+ L L + +P + + +K G V+LG G II P I PS + R+ T
Sbjct: 55 PTVDLTAKLVENRVQPAAAEEIEK-GEAYVVLGGG--IIEKTPVGNI-PSETASVRLMNT 110
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
LY S + TI I+GG ++ES VY L+ + DI E +S T +N
Sbjct: 111 AILYNSHPK-----TIYITGGKVTNQQVSESSVYKKILIGLNIPDSDILTEERSRTTMEN 165
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIP 215
A+++S ++K KNI+LV+SA H+ RS++ F+ G N + Y+ Y + IP
Sbjct: 166 ARYTSELLKKSNIKNIVLVTSASHMTRSKMTFEKQGFNVVPAPCGYIQNYKNYNMLDFIP 225
Query: 216 LSANFYLTELALKEYIGILIAYYRG 240
S N + E+ GI+ RG
Sbjct: 226 RSDNLSYFMRLIWEFAGIVYYGIRG 250
>gi|15606980|ref|NP_214362.1| hypothetical protein aq_1986 [Aquifex aeolicus VF5]
gi|2984233|gb|AAC07762.1| hypothetical protein aq_1986 [Aquifex aeolicus VF5]
Length = 241
Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 23/205 (11%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
I +L+ L+ Y++P + G+ IV+LG G + A S+ R+
Sbjct: 53 IKDLLIYPLENYYKKPEVL-----KGDAIVVLGGGVYNNGRLKA-------SSFKRLITG 100
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
LYK K+ II+SGG + + E+ V L GV +DI + +S DTF+N
Sbjct: 101 FLLYKELKK-----PIILSGGA-SINVIPEAKVMKELLRSFGVPEEDIYTDVRSRDTFEN 154
Query: 161 AQFSSSMI-KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD--YLNAY--YSIIP 215
A+F M K ++ K +ILV+S +H+ R+ F+ G+ +D + Y YS+ P
Sbjct: 155 AKFVKEMCEKLLKCKEVILVTSGFHMPRAVGVFKKAGLEVIPYPTDLKFEGKYNVYSLFP 214
Query: 216 LSANFYLTELALKEYIGILIAYYRG 240
+ FY + +A++EYIG+L +G
Sbjct: 215 KYSVFYDSSIAIREYIGLLFYKLKG 239
>gi|323142298|ref|ZP_08077130.1| hypothetical protein HMPREF9443_01929 [Phascolarctobacterium sp.
YIT 12067]
gi|322413182|gb|EFY04069.1| hypothetical protein HMPREF9443_01929 [Phascolarctobacterium sp.
YIT 12067]
Length = 258
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 117/247 (47%), Gaps = 21/247 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKH-LQFSYQRPLLSP 60
+L I L V W R F +S F+ L + ++ LL L+ Y +
Sbjct: 19 VLLGIILSVYLWRRRQNIGRFAFSLSAFLTLLLYFSSTLLGAKLLGQPLENRYIQ----- 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q +IV+LG G+ R +R+ RL KQHS+ ++ISG
Sbjct: 74 QQPDAAQVIVVLGGGSVGSAPDGTERGGLMSAGAARLLTAARL---AKQHSL--PVLISG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + G++E++V LL+ G+ ++ I +ETQ+ T +NA +++ + ++++L++
Sbjct: 129 GQVFRDGVSEALVAERILLQLGLPQEQIIVETQARTTKENAAYTAMHCRERGYQSVLLLT 188
Query: 181 SAYHLKRSQLYFQHF----GINTKASCSDY-LNAYYS-----IIPLSANFYLTELALKEY 230
SA H+ RS +F+ + G+ A DY LN ++P F +T +AL EY
Sbjct: 189 SALHMPRSMQFFERYLGEQGVKVAAYPCDYTLNPQGKFNPRWLVPQLQAFDVTCMALHEY 248
Query: 231 IGILIAY 237
+G+ A+
Sbjct: 249 VGMAGAF 255
>gi|327398427|ref|YP_004339296.1| hypothetical protein Hipma_0260 [Hippea maritima DSM 10411]
gi|327181056|gb|AEA33237.1| protein of unknown function DUF218 [Hippea maritima DSM 10411]
Length = 258
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 117/241 (48%), Gaps = 29/241 (12%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
LI+ L + R F +S F+L F I T K+L SY + + +
Sbjct: 31 LILITASFLVKRFRWFFMVSAFVLWF-------ISTTPGKNLLLSYLEDIKTSS--DTAS 81
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+V+L G+ P RI+ +++ R+ + L K + +I SGG + +
Sbjct: 82 AVVVLSGGSN-----PYDRIKTYPEAFKRLMYGILLAKR-----YNIPLIFSGGGLKYND 131
Query: 128 LAESIVYNNKLLESGVERDDIKL--ETQSLDTFQNAQFSSSMIKNMQ-GKNIILVSSAYH 184
A++ N+ + + + IK+ E +SL+T+QNA+++S + M+ K+I +V+SAYH
Sbjct: 132 SAQA--KNDIEIIAKICNCKIKIYFENKSLNTYQNAKYTSKFFEKMKIKKDIFIVTSAYH 189
Query: 185 LKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
KR+ + F++FG + ++ ++ +P NFY + A+ EYIGI Y R
Sbjct: 190 QKRANILFRYFGFRVHSRPVNFFKERGSYVFWDFLPQMGNFYKSYKAIHEYIGIFSLYLR 249
Query: 240 G 240
G
Sbjct: 250 G 250
>gi|291532233|emb|CBL05346.1| Uncharacterized conserved protein [Megamonas hypermegale ART12/1]
Length = 194
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT-IIPTIPAIRIEPSFQSYSRIFETMR 102
+L+ L+ +Y P P + ++I++LG G T P + S + +R+ +R
Sbjct: 1 MLIGRLEDAYDPPKHLP----NADVIIVLGGGATGDTPDVTGTGTLCSIPA-NRLLTAVR 55
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
L Q + II+SGG + E+ + L E GV D I LE +SL+T QNA+
Sbjct: 56 L-----QKKLGIPIIVSGGQIYEDSGREADIARRILKELGVSEDMILLENRSLNTTQNAE 110
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPL 216
+S++++K+ + K +LV+SA+H++R+ + F G++ DY+ Y + P
Sbjct: 111 YSTNILKSRKYKQPLLVTSAFHMERAVVNFNKLGVDVIPYPCDYMVNKEKVFHYNRLAPS 170
Query: 217 SANFYLTELALKEYIGILIAYY 238
S T + L+E + + Y
Sbjct: 171 SQALEFTAIYLQENLRTFVTKY 192
>gi|75675900|ref|YP_318321.1| hypothetical protein Nwi_1708 [Nitrobacter winogradskyi Nb-255]
gi|74420770|gb|ABA04969.1| Protein of unknown function DUF218 [Nitrobacter winogradskyi
Nb-255]
Length = 280
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 23/201 (11%)
Query: 60 PQWKKDG---NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P W+ DG + I++LG ++ +E + S R+ + L + + I
Sbjct: 85 PAWQHDGRDPDGIIVLGGAVDADISVSRGAVETN-ASAERVIAALELARRFPK----ARI 139
Query: 117 IISGGDPQK-HGL-AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+ SGG GL AE+ V + G+ R+ I LET+S T +NA+F+ ++K G+
Sbjct: 140 VYSGGAGNLIAGLRAEAPVMGRLFEQFGIPRERIVLETRSRTTDENARFTRELVKPESGE 199
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSD-----YLNAYYSIIPLSANFYLTELALKE 229
+LV+SAYH+ RS F+ G + + D +++A+ LSA + A E
Sbjct: 200 RWLLVTSAYHMPRSVGVFRKAGFDVEPYPVDWRTRGWIDAWMPFDKLSAGLARADTAAHE 259
Query: 230 YIGILI--------AYYRGNR 242
++G+L+ A++ G+R
Sbjct: 260 WVGLLVYRMTGRSDAFFPGSR 280
>gi|225849301|ref|YP_002729465.1| hypothetical protein SULAZ_1499 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644421|gb|ACN99471.1| conserved hypothetical protein [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 242
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 29/238 (12%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTI--LLKHLQFSYQRPLLSPQWK 63
IF +++Y+ + RKIF +S F ++ I P LL+ L+ Y P K
Sbjct: 21 IFSVIAYF---GRKDRKIFIVSFLSAFFIYL-LSIEPVKDSLLRPLETKYPIP-----NK 71
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+G++IV+LG G+ I E S + R+ L+K ++ II+SGG
Sbjct: 72 LNGDVIVVLGGGSYNT----GILTEDSLK---RVLTGFVLHKK-----LNLPIILSGGSA 119
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ L E+ V N L E GV++ I + S DT NA F + + K IILV+SAY
Sbjct: 120 ITN-LPEAEVMKNILNELGVDKSMIYTDVNSRDTLGNAFFVKKICEKNGFKRIILVTSAY 178
Query: 184 HLKRSQLYFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAY 237
H+ RS + FQ G++ +D+ YS P + A++EY+G LIAY
Sbjct: 179 HMPRSVIVFQKAGLDVIPYPTDFKMDKRYTVYSYFPKMNVLQDSTKAIREYVG-LIAY 235
>gi|260887636|ref|ZP_05898899.1| putative membrane protein [Selenomonas sputigena ATCC 35185]
gi|330837998|ref|YP_004412578.1| protein of unknown function DUF218 [Selenomonas sputigena ATCC
35185]
gi|260862652|gb|EEX77152.1| putative membrane protein [Selenomonas sputigena ATCC 35185]
gi|329745762|gb|AEB99118.1| protein of unknown function DUF218 [Selenomonas sputigena ATCC
35185]
Length = 252
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT-TIIPT 81
+ + F LL +++ + +L+ L+ +Y P K +G+++++LG G + P
Sbjct: 42 VLITAVFYLLSTYL----VADVLMGALEDAYM-----PPAKPEGDVVIMLGGGAFSDAPD 92
Query: 82 IP---AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ A+ PS +R+ +RL + I++SGG + E+++ L
Sbjct: 93 VDGEGALTASPS----TRLLTAVRL-----AQKLDLPILVSGGQVFQESGKEALLAKRTL 143
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ G+ I +E S +T QNA +++ ++K ILV+SA+H+KRS L ++ GI
Sbjct: 144 VSLGIPESRILVEGASQNTVQNAAYTAKILKEHGLVRPILVTSAFHMKRSVLNYEKLGIE 203
Query: 199 TKASCSDYLNAYYSII------PLSANFYLTELALKEYIGILIAYYRGN 241
+DY+ +++ I P + + + L+E + + Y G
Sbjct: 204 VVPYPTDYMVSHHPIFHVVKLAPSADALHTNAVVLQECLRTAVTYCLGK 252
>gi|288958654|ref|YP_003448995.1| hypothetical protein AZL_018130 [Azospirillum sp. B510]
gi|288910962|dbj|BAI72451.1| hypothetical protein AZL_018130 [Azospirillum sp. B510]
Length = 264
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF-QSYSRIFETMRLYKSCKQHSMHC 114
P P+ + DG I++LG + P I A R +PS ++ RI L ++H
Sbjct: 72 PRSEPEGRIDG--IIMLGG--AVNPPITADRGDPSLNEAAERILGFADL---VRRHP-EA 123
Query: 115 TIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+ +GG Q L E + L ++G+ D + E +S +T++NA FS M++
Sbjct: 124 KAVFTGGSGQLLAPDLKEDVTARAALAQAGIPADRVLYEAESRNTWENAVFSKEMVRPRP 183
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP-----LSANFYLTELAL 227
G+ IL++SA H+ RS F+ G + DY + P L N + + A+
Sbjct: 184 GERWILITSAMHMPRSVGIFREVGWPVEPYPVDY-RTRHDARPILRFQLDQNLVILDDAV 242
Query: 228 KEYIGILIAYY 238
+E+IG L AY+
Sbjct: 243 REWIG-LAAYW 252
>gi|83814701|ref|YP_445779.1| hypothetical protein SRU_1660 [Salinibacter ruber DSM 13855]
gi|83756095|gb|ABC44208.1| Uncharacterized ACR, COG1434 family [Salinibacter ruber DSM 13855]
Length = 281
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSF-QSYSRIFETMRLYKSCKQHSMHCTIIISGG-DPQKHG 127
V+LG G + P P RI P + R++ RLY + K +I SGG P K
Sbjct: 83 VVLGGGVS--PPRPP-RIHPDLNDAADRVWHAARLYHAGKVP----LVIASGGTQPWKRP 135
Query: 128 LAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
A N LL+ GV D I LE++S +T++NA ++ ++ ++LV+SA H+
Sbjct: 136 DAREAPATNVLLQDWGVPGDAILLESKSANTYENATRTAELLDRRGLNCVLLVTSALHMP 195
Query: 187 RSQLYFQHFGIN-----TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ F+ GI T D ++P + + A++EY+G L+ +RG
Sbjct: 196 RALAVFRSAGIKAVPAPTDVQVGDRNYTVLDVLPDAGALAGSTAAIREYVGYLVYDWRG 254
>gi|281418736|ref|ZP_06249755.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
gi|281407820|gb|EFB38079.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
Length = 251
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS--RIFETMRLYKSCKQHSMHCTII 117
P + +G++I++LG G P + + S + R+ ++LY + + II
Sbjct: 71 PPSELNGDVIIMLGGGA--FADTPNVNGKGHLSSIAANRLLTCVQLY-----YKLDVPII 123
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGG H +E + N LL GV + I +E +SL+T QNA ++ ++ I
Sbjct: 124 ISGGQIPGHTTSEGEIARNILLSLGVPEEKIIVENRSLNTTQNAFYTKELLDKHGFNKPI 183
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYI 231
LV+SA+H+KR+ F+ +N +DY + +P + ++KEY+
Sbjct: 184 LVTSAFHMKRAVKQFEKNEVNVIPYPTDYQTNSIRKITFMDFVPSAEALQKFYFSVKEYV 243
Query: 232 GIL 234
GI+
Sbjct: 244 GIV 246
>gi|75906624|ref|YP_320920.1| hypothetical protein Ava_0399 [Anabaena variabilis ATCC 29413]
gi|75700349|gb|ABA20025.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 263
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 47 KHLQFSYQRPLLSPQWKKDGNIIVLLGNGT-TIIPTIPAIRIEPSF-QSYSRIFETMRLY 104
K+L S + L P + I++LG T ++ P RI P + R+ +LY
Sbjct: 58 KYLVRSLEWQNLPPAQLPNAEAIIVLGGATKSVFPP----RITPDLSEQGDRVIYAAQLY 113
Query: 105 KSCKQHSMHCTIIISGG--DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
+ K II+SGG D + G +ES N L G+ + E SL+T+QNA
Sbjct: 114 RQNKAP----LIILSGGRIDWRGSGSSESTDMANILTSLGIPASVLIEEPDSLNTYQNAV 169
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL--------------N 208
++ + ++LV+SA H+ RS FQ G+N + +D+L
Sbjct: 170 NVKKILASRGIDKVLLVTSALHMPRSLKIFQRQGMNVIPAPTDFLVSAGELQELGNTPKA 229
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
A +++P + N +L ALKEY+G I + RG
Sbjct: 230 AILNLLPDTYNLHLFTNALKEYVGSFIYWLRG 261
>gi|149925438|ref|ZP_01913702.1| Uncharacterized ACR, COG1434 family protein [Limnobacter sp.
MED105]
gi|149825555|gb|EDM84763.1| Uncharacterized ACR, COG1434 family protein [Limnobacter sp.
MED105]
Length = 274
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 19/178 (10%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSF-QSYSRIFETMRLYKSCKQHSMHCTIIISGG---- 121
+ IV+LG G + +R P + R+++ RLYK + I++SGG
Sbjct: 92 DAIVVLGGG--LEGRFDGVRALPDLNDAGDRVWQGARLYK----QGVATRIVLSGGQFQT 145
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
DP+K AE+ +L+ GV D + +E S TF+NA + ++ + ++I LV+S
Sbjct: 146 DPRKE--AEAPGMKMFMLDMGVPEDALVIEDNSRTTFENAVRTRELLGE-RARSIALVTS 202
Query: 182 AYHLKRSQLYFQHFG-----INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
A+H+ RS L+F+ G + T + A++ +P + +A+KEY+G L
Sbjct: 203 AFHMGRSVLWFEKAGFTVYPVRTDIRVLNESRAFWEWLPKPQALDESTVAIKEYLGRL 260
>gi|145299198|ref|YP_001142039.1| integral membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142851970|gb|ABO90291.1| integral membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 256
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 30/231 (12%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+C +++ + +G + L + L+ ++ P D IV+LGNG P IP
Sbjct: 40 LLATCSLVIVALMGMRPVSYELARGLEQTF--PPFEISQHPDIEAIVVLGNGHVSDPAIP 97
Query: 84 AIRIEPSFQ---SYSRIFETMRLYKSCKQHSMHCTIIISG---GDPQKHGLAESIVYNNK 137
E ++Q + +R E +RL + Q T++ SG GDP L+ + V
Sbjct: 98 ----ERAWQNNIALARTLEGVRLALAYPQ----ATLVFSGYVSGDP----LSNAEVNARM 145
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
G+ER + L + DT A S+ + ++GK + LVSSA HL R+ +Q G+
Sbjct: 146 AASLGIERSRMTLFENNQDTHDEA---VSISRYLKGKQVALVSSATHLPRAMALYQGQGL 202
Query: 198 NTKASCSDY-------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + +DY YS +P +E A+ E+IG+ A RG
Sbjct: 203 DAVPAPTDYTAKQSQVAQPLYSYLPKGRYLMYSEAAIHEWIGVWWARLRGQ 253
>gi|186681117|ref|YP_001864313.1| hypothetical protein Npun_F0616 [Nostoc punctiforme PCC 73102]
gi|186463569|gb|ACC79370.1| protein of unknown function DUF218 [Nostoc punctiforme PCC 73102]
Length = 263
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 29/254 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+S + +V+ W + I F + +LLF W I L++ L++ PL Q
Sbjct: 21 VSLVVALVTLWKRPRTAAIAIAF-ALTLLLFCSNAW--IAKSLVRSLEWQ-NLPLA--QI 74
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
I+VL G + P P + + +S R+ +LY+ + II+SGG
Sbjct: 75 PVAEAIVVLGGATKSAFPPRPTVDLS---ESGDRVIYAAQLYRQKRAP----IIILSGGR 127
Query: 122 -DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D + G ES L G+ + I E +SL+T+QNA ++++ ++LV+
Sbjct: 128 IDWRGGGSPESADMATILTSIGIPSEAIVQEPESLNTYQNAVNVRKILESRGINQVLLVT 187
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL--------------NAYYSIIPLSANFYLTELA 226
SA H+ RS FQ GIN + +D+L A +++P + N + A
Sbjct: 188 SAMHMPRSLNIFQRQGINVIPAPTDFLVSQGELQELGGTPKAAILNLLPDTDNLHQFTSA 247
Query: 227 LKEYIGILIAYYRG 240
LKEYIG LI RG
Sbjct: 248 LKEYIGSLIYRLRG 261
>gi|90424829|ref|YP_533199.1| hypothetical protein RPC_3338 [Rhodopseudomonas palustris BisB18]
gi|90106843|gb|ABD88880.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB18]
Length = 264
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 20/195 (10%)
Query: 60 PQWKKDG----NIIVLLGNGTTIIPTIP-AIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
P W+ DG +IVL G+ + T A+ ++ S + + + R + +
Sbjct: 70 PAWQADGRAPDGVIVLGGSIDAEVSTARNALELDASAERIVVMLQLARRFPDAR------ 123
Query: 115 TIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
I+ SGG + +AE+ + L G+ + I LE +S T +NA F+ +++
Sbjct: 124 -IVFSGGSANLLQAPVAEAPIAGRLLHSFGIAPERIVLEDRSRTTAENAAFTRALVTPAA 182
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSD-----YLNAYYSIIPLSANFYLTELAL 227
G+ +LV+SA+H+ RS F+ G + +A D +++A LSA T++A+
Sbjct: 183 GERWLLVTSAFHMPRSIAAFRAVGFDVEAYPVDWRTRGWIDAAMPFDRLSAGLARTDVAV 242
Query: 228 KEYIGILIAYYRGNR 242
E++G LIAY R
Sbjct: 243 HEWVG-LIAYRLAGR 256
>gi|125974798|ref|YP_001038708.1| hypothetical protein Cthe_2313 [Clostridium thermocellum ATCC
27405]
gi|256004933|ref|ZP_05429906.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|125715023|gb|ABN53515.1| protein of unknown function DUF218 [Clostridium thermocellum ATCC
27405]
gi|255991113|gb|EEU01222.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|316941930|gb|ADU75964.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
1313]
Length = 251
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS--RIFETMRLYKSCKQHSMHCTII 117
P + +G++I++LG G P + + S + R+ ++LY + + II
Sbjct: 71 PPSELNGDVIIMLGGGA--FADTPNVNGKGHLSSIAANRLLTCVQLY-----YKLDVPII 123
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGG H +E + N LL GV + I +E +SL+T QNA ++ ++ I
Sbjct: 124 ISGGQIPGHTTSEGEIAMNILLSLGVPEEKIIVENRSLNTTQNAFYTKELLDKHGFNKPI 183
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYI 231
LV+SA+H+KR+ F+ +N +DY + +P + ++KEY+
Sbjct: 184 LVTSAFHMKRAVKQFEKNEVNVIPYPTDYQTNSIRKITFMDFVPSAEALQKFYFSVKEYV 243
Query: 232 GIL 234
GI+
Sbjct: 244 GIV 246
>gi|218437457|ref|YP_002375786.1| hypothetical protein PCC7424_0452 [Cyanothece sp. PCC 7424]
gi|218170185|gb|ACK68918.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7424]
Length = 260
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 86/183 (46%), Gaps = 22/183 (12%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG--DPQKH 126
IVLLG G T P P ++ S Q R+ +LY K II SGG D +
Sbjct: 79 IVLLG-GATKPPAYPRPMVDMSEQG-DRVLYAAKLYLDQKAP----LIIASGGRIDWLSN 132
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ES N L GV I E SL+T++NA +++ K ++LV+SA H+
Sbjct: 133 EQSESADMANLLQLMGVPPQVIIQEPDSLNTYENATNVKKILQEKGIKQVLLVTSALHMP 192
Query: 187 RSQLYFQHFGINTKASCSDYL--------------NAYYSIIPLSANFYLTELALKEYIG 232
RS F+ GI+ A+ +D+L +I+P S N T ALKEYIG
Sbjct: 193 RSLFIFKKLGIDVIAAPTDFLVSRTELEPNNLTLEGIILNILPSSENLDRTTKALKEYIG 252
Query: 233 ILI 235
+L+
Sbjct: 253 LLV 255
>gi|260459193|ref|ZP_05807448.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
gi|259034747|gb|EEW36003.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
Length = 265
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L+ + W + ++L L+ + RP L PQ K DG IV+LG G + E S
Sbjct: 47 LILALSAWTSLGAMMLNPLEERFARPPL-PQ-KVDG--IVVLGGGFEGAINLTRGGYELS 102
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK--HGLAESIVYNNKLLESGVERDDI 148
S R+ ET L + Q +++SGG+ G ++ L GV D +
Sbjct: 103 -SSGDRMVETAILARRFPQ----AKVVVSGGNGSLFLDGEGDADTAPRLLGPLGVSADRL 157
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
LE +S +T++NA FS +++ G+ +LV+SA+H+ R++ F G T DY
Sbjct: 158 VLEDKSRNTYENAVFSRKLVEPKPGETWLLVTSAFHMPRAKALFDKAGFPTVPWPVDYRT 217
Query: 209 AYYSIIPL-----SANFYLTELALKEYIGILIAYYRGNR 242
+ + L + + T +A++E+IG L AY+ R
Sbjct: 218 SGKEGVGLFRDNAADSLENTTMAIREWIG-LFAYWLSGR 255
>gi|308274760|emb|CBX31359.1| hypothetical protein N47_E48710 [uncultured Desulfobacterium sp.]
Length = 254
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 32/251 (12%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFS-----FIGWGIIPTILLKHLQFSYQRPLLSP 60
+FL+ + LL + K MS +++F FI + I P +L +L+ YQ PL+
Sbjct: 20 LFLVCGVFFLLLKKKEK---MSKSIIVFGVISLVFISFNIFPDKILGYLEHKYQ-PLIHI 75
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEP----SFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ D IV+LG G + ++P + S R+ E + ++ + I
Sbjct: 76 KLISDARWIVVLGGGCK-----GDLMLDPISRLTSDSLFRVVEGISIHNKIPE----SKI 126
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I SGG ++ES + L GV +D I E++ DT A ++ N
Sbjct: 127 IFSGGSVFST-ISESEAMADVALALGVNKDKIVEESEGPDTEAQALLIKKIVGN---DKF 182
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII------PLSANFYLTELALKEY 230
ILV+SA+H+ RS F G++ A+ + YL I P SA ELA+ EY
Sbjct: 183 ILVTSAFHMPRSMAVFNKAGMHPIAAPAGYLVKKRKNINLLLFFPKSAEIKKMELAVHEY 242
Query: 231 IGILIAYYRGN 241
+G+ A RG
Sbjct: 243 LGLFWAKIRGR 253
>gi|160902984|ref|YP_001568565.1| hypothetical protein Pmob_1541 [Petrotoga mobilis SJ95]
gi|160360628|gb|ABX32242.1| protein of unknown function DUF218 [Petrotoga mobilis SJ95]
Length = 214
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 95/178 (53%), Gaps = 14/178 (7%)
Query: 64 KDGNIIVLLGNGTTIIPTIP-AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++ +IV+LG G IIP P E S + R++E LYK+ + I+++GG
Sbjct: 38 QEKGVIVVLGGG--IIPETPREGSGELSDSAMKRVYEGFLLYKN-----LQIPIVVTGGK 90
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ E+ + +LL+ GV+ +DI +E + +T QNA+F+ +++++ + + I L++SA
Sbjct: 91 LLGTEIPEAQIMKEELLKMGVKPNDIYVEPLAKNTKQNAEFTLTLLESDEVQKIYLITSA 150
Query: 183 YHLKRSQLYFQHF-GINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGIL 234
HL R+ YF+ + I+ +DY + +Y +P T A EY+G++
Sbjct: 151 IHLPRAMNYFKSYTNIDVVPVPTDYKISREELKWYDFLPDMRFLEATSSAWHEYLGLV 208
>gi|183220138|ref|YP_001838134.1| hypothetical protein LEPBI_I0726 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910258|ref|YP_001961813.1| hypothetical protein LBF_0703 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774934|gb|ABZ93235.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778560|gb|ABZ96858.1| Conserved hypothetical protein; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 258
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+FF+ C L + I L+ L+ Y P +S Q ++ ++LG +I TI
Sbjct: 41 LFFIICLFLYLA--SSSFIANRLVTELEKEY--PPVSLQDAPKVDVAIVLGG---MIQTI 93
Query: 83 PAIRIEPSF-QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK---- 137
+++ P S RI + +RLYK+ K I+ +GG GL S Y
Sbjct: 94 SSVKARPELTDSADRITDAIRLYKAGKVKK----ILFTGG----SGLLLSDTYREADLAK 145
Query: 138 --LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
++ GV+ +DI LE S +T +NA + ++ ++ +L++SA+H+KRS FQ
Sbjct: 146 SLFIDLGVKEEDIILENNSRNTHENAVETKKILMEKNFQSFLLITSAFHMKRSLGCFQKQ 205
Query: 196 GINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGILI 235
+N +DY + A+ +P + LT L++KE++G +
Sbjct: 206 NLNVFPFPTDYRSFNTDSGAFELYLPSAGYLDLTTLSIKEWVGYFV 251
>gi|17229959|ref|NP_486507.1| hypothetical protein alr2467 [Nostoc sp. PCC 7120]
gi|17131559|dbj|BAB74166.1| alr2467 [Nostoc sp. PCC 7120]
Length = 263
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 25/190 (13%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSF-QSYSRIFETMRLYKSCKQHSMHCTIIISGG--DPQ 124
IIVL G ++ P RI P + R+ +LY+ K II+SGG D +
Sbjct: 80 IIVLGGATKSVFPP----RITPDLSEQGDRVIYAAQLYRQNKAP----LIILSGGRIDWR 131
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
G +ES N L G+ + E SL+T+QNA ++ + ++LV+SA H
Sbjct: 132 GSGSSESTDMANILTSLGIPASVLIEEPDSLNTYQNAVNVKKILVSRGIDQVLLVTSALH 191
Query: 185 LKRSQLYFQHFGINTKASCSDYL--------------NAYYSIIPLSANFYLTELALKEY 230
+ RS FQ G+N + +D+L A +++P + N +L ALKEY
Sbjct: 192 MPRSLKIFQRQGMNVIPAPTDFLVSEGELQELGNTPKAAILNLLPDTYNLHLFTNALKEY 251
Query: 231 IGILIAYYRG 240
+G + + RG
Sbjct: 252 VGSFVYWLRG 261
>gi|117619411|ref|YP_856904.1| integral membrane protein [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560818|gb|ABK37766.1| integral membrane protein [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 259
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 28/189 (14%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQ---SYSRIFETMRLYKSCKQHSMHCTIIISG- 120
D IV+LGNG P +P E S+Q + +R E +RL ++ Q +I SG
Sbjct: 82 DIEAIVVLGNGHVSDPAVP----ERSWQNNIALARTLEGVRLAQAYPQ----AELIFSGY 133
Query: 121 --GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GDP L+ + V + G+ R + L + DT A S+ ++++GK + L
Sbjct: 134 VSGDP----LSNAEVNARMAVSLGIPRSRMTLFENNKDTHDEA---VSISRHLKGKRVAL 186
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDY-------LNAYYSIIPLSANFYLTELALKEYI 231
VSSA HL R+ +Q G+N + ++Y YS +P +E A+ E+I
Sbjct: 187 VSSATHLPRAMALYQGQGLNAVPAPTNYTAKQSQVAQPLYSYLPKGRYLMYSEAAIHEWI 246
Query: 232 GILIAYYRG 240
G+ A RG
Sbjct: 247 GVWWARLRG 255
>gi|254412764|ref|ZP_05026537.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196180499|gb|EDX75490.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 263
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 105/232 (45%), Gaps = 30/232 (12%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT-TIIPTIPA 84
+ +LL + GW + +++ L++ + P PQ IV+LG T + IP PA
Sbjct: 43 LGLIILLVASNGW--VANSMVQSLEWQHIPPTELPQ----AEAIVILGGATRSAIPPRPA 96
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG--DPQKHGLAESIVYNNKLLESG 142
+ ++ R+F +LY+ K II SGG + + G ES L G
Sbjct: 97 PDLN---EAGDRVFYGAQLYQQGK----APVIIASGGRIEWRGGGSPESADMAQILEMIG 149
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V I + SL+T QNA +++ K ++LV+SA H R+ FQ GI +
Sbjct: 150 VPPSAILQDPASLNTHQNAVNVRRILQQEGIKKVLLVTSAMHTPRALRVFQRQGIEAIPA 209
Query: 203 CSDYL---------NAYYSII-----PLSANFYLTELALKEYIGILIAYYRG 240
+D+L N+ + I P + N +T A+KEYIG + + RG
Sbjct: 210 PTDFLVTQQELNEPNSSLAAILLNGLPDAQNLDMTTRAIKEYIGTAVYWLRG 261
>gi|187776701|ref|ZP_02993174.1| hypothetical protein CLOSPO_00216 [Clostridium sporogenes ATCC
15579]
gi|187775360|gb|EDU39162.1| hypothetical protein CLOSPO_00216 [Clostridium sporogenes ATCC
15579]
Length = 324
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R+ P + R+ + +R+Y C+QH I++SGG ++E+ N L+E+G
Sbjct: 168 RVSPLLKG--RVDKAVRIYHKCRQHP---KIVVSGGKGDDEKISEAAAMKNYLVETGFPE 222
Query: 146 DDIKLETQSLDTFQNAQFSSSMIK-NMQGKNIILVSSAYHLKRSQLYFQHFGINTKA-SC 203
+DI LE QS TF+N + M+ N I V++ YH+ R+ LY + I C
Sbjct: 223 EDIILEEQSKTTFENLKNVRDMLDVNGVKHRYIFVTNNYHVFRTSLYAKKLKIKASGVGC 282
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+A +Y ++EYI I+ Y
Sbjct: 283 G------------TAAYYWPSAFIREYIAIMFRY 304
>gi|209884886|ref|YP_002288743.1| hypothetical protein OCAR_5752 [Oligotropha carboxidovorans OM5]
gi|209873082|gb|ACI92878.1| protein of unknown function [Oligotropha carboxidovorans OM5]
Length = 264
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Query: 60 PQWKKDGNI---IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P W DG IV+LG I P + A R + + E M + + I
Sbjct: 70 PAWHDDGRAPDGIVVLGG--AISPDLTAERGTAELNASA---ERMTAAAELARRFPNAKI 124
Query: 117 IISGGDPQK-HGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
++SGG+ H L+ LLE+ GV D I E +S +T++NA F+ ++K G+
Sbjct: 125 VLSGGNANVFHPLSTEAEVGRVLLENLGVAADRIVREDRSRNTYENAIFTRDVVKPKPGE 184
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKA-----SCSDYLNAYYSIIPLSANFYLTELALKE 229
+LV+SAYH+ R+ F+ +A S + A + LSA + A +E
Sbjct: 185 RWLLVTSAYHMPRAIGVFRAANFPVEAYPIDWRTSGWKEAGRPFLKLSAGLARLDTAARE 244
Query: 230 YIGILIAYYRGNR 242
++G LI Y R
Sbjct: 245 WVG-LIGYRLAGR 256
>gi|254423832|ref|ZP_05037550.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196191321|gb|EDX86285.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 263
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
++ F+L FS I+ LL L++ Y P P + IV+LG T +PAI
Sbjct: 42 LALFILFFS--SNPIVSNKLLSSLEWRYFPPDPVPT----ADAIVVLGGAT-----VPAI 90
Query: 86 RIEPSFQ---SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ-KHGLAESIVYNNKL--L 139
P + + RI RLY + + I+SGG Q + G ES + K +
Sbjct: 91 APRPWVEVSEAGDRILYAARLYNQGRAPKL----ILSGGRVQWRGGSDESEADDMKAFAM 146
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
V DI LE SL+T QNA ++ +++LV+SA H+ RS FQ I+
Sbjct: 147 AMNVPEADIILEETSLNTRQNAVNVKKILAAQSIDSVLLVTSAVHMPRSVAIFQKLDIDV 206
Query: 200 KASCSDYL--------------NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +DYL S++P + A+KEY+G +I RG
Sbjct: 207 IPAPTDYLVTTPSDESGEITIEGRILSLLPRAEATGRFTRAMKEYVGFVIYRLRG 261
>gi|119945885|ref|YP_943565.1| hypothetical protein Ping_2225 [Psychromonas ingrahamii 37]
gi|119864489|gb|ABM03966.1| hypothetical protein DUF218 [Psychromonas ingrahamii 37]
Length = 254
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 111/227 (48%), Gaps = 26/227 (11%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
Q + K + F+LLF + + + L++ L+ Y P++ P ++ I++LG+G
Sbjct: 36 QKLAKFNLLVSFILLF-LLSFMPVSEQLVQPLERQYP-PVMQP--AQNFKYILVLGSGGI 91
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG---DPQKHGLAESIVY 134
P++P + + S + SR E +RLY + + T+++SGG D + H L +
Sbjct: 92 ADPSLP-VTGQLSAVALSRFVEALRLYHANP----NATLVVSGGNFGDIKSHAL----LM 142
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ + +D+I +LDT A+ S +IK G++ +LV+SA H+ RS F+
Sbjct: 143 QELAMAMNIPKDNIIRLDNTLDTDDEAKQMSKIIK---GQSAVLVTSATHMPRSMGLFKQ 199
Query: 195 FGINTKASCSDYL-------NAYYSIIPLSANFYLTELALKEYIGIL 234
+ + +DYL YY IP S T++A EY+G L
Sbjct: 200 YNAFPTPAPADYLAKKREGETPYYYYIPSSNYLDKTKVAWHEYLGKL 246
>gi|319790359|ref|YP_004151992.1| protein of unknown function DUF218 [Thermovibrio ammonificans HB-1]
gi|317114861|gb|ADU97351.1| protein of unknown function DUF218 [Thermovibrio ammonificans HB-1]
Length = 261
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI--RIEPSFQSYSRIFETM 101
+ LK L+ +Y P LS + IV+LG G I+P PA R Q R+ E
Sbjct: 59 LTLKPLEDAYPYPKLS---SLNCTYIVVLGGG--IVPHSPAAGGRATVRPQVAKRLLEAW 113
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
+L++ K+ I+ +GG + +E+ V L GV IK+E +S TF+NA
Sbjct: 114 KLWRVLKK-----PIVATGGVLYPNVESEAAVMARFLEGLGVPASQIKVEGKSRTTFENA 168
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-LNA----YYSIIPL 216
+F+ +I ++I LV+SAYH+ RS F+ FG +DY +N + S +P+
Sbjct: 169 EFTYRLIGP---QSICLVTSAYHMPRSVRIFKSFGFKVTPVPTDYRVNRAGYNWLSFMPI 225
Query: 217 SANFYLTELALKEYIGI 233
T +E++GI
Sbjct: 226 YG--VDTYFGFREWVGI 240
>gi|167629577|ref|YP_001680076.1| hypothetical protein HM1_1492 [Heliobacterium modesticaldum Ice1]
gi|167592317|gb|ABZ84065.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
Length = 252
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI-IPTIPA 84
M+ + LFS G +++ L+ Y P K G++I++LG G T+ P I
Sbjct: 46 MALLLYLFSISAVG---ETMIRSLENRYL-----PPDKPSGDVIIMLGGGATMDTPDIDG 97
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ + + S +R+ RL++ II+S G ++ ES + +L GV
Sbjct: 98 LG-QMTGGSANRLLTAARLHQLTG-----APIIVSAGQVFENSGNESRIAFRQLTGLGVP 151
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
I +E S +T +NA+++ ++ ILV+SA+H++RS +F G++T +
Sbjct: 152 ESMIIVEEMSRNTEENARYTKEILDARGFHKPILVTSAFHMERSVGHFSKLGVSTLPFPT 211
Query: 205 DY---LNAYYSI---IPLSANFYLTELALKEYIGIL 234
DY A YS+ P + LA+KEY+G++
Sbjct: 212 DYRVNRQARYSLNDWAPSAVAMSNASLAMKEYLGLI 247
>gi|217077219|ref|YP_002334937.1| hypothetical protein THA_1144 [Thermosipho africanus TCF52B]
gi|217037074|gb|ACJ75596.1| conserved hypothetical protein [Thermosipho africanus TCF52B]
Length = 241
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 15/173 (8%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++IV+LG G T + E + R+ + +Y+ + IIISGG K
Sbjct: 76 SVIVILGGGITFFDG----KYEVGNHTLKRLLKGFEIYRKT-----NAPIIISGGVIGK- 125
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
G++ES + + L+ GV +DI +E ++ T +NA F S ++K +NIILV+S H+K
Sbjct: 126 GISESAIMKDILVTFGVNINDIIVEDKARTTKENAIFVSKLLKGKNFENIILVTSFLHMK 185
Query: 187 RSQLYFQHFGINT--KASCS---DYLNAYYSIIPLSANFYLTELALKEYIGIL 234
RS + F+ + C D+ N++ +P + Y E+ GIL
Sbjct: 186 RSIMLFEKYSKKNIIPIVCDYPIDFRNSFLDYLPSAEALYTFSQITHEFFGIL 238
>gi|325524364|gb|EGD02455.1| hypothetical protein B1M_21433 [Burkholderia sp. TJI49]
Length = 138
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI--GWGIIPTILLKHLQFSYQRPLLSPQ 61
S++ L + + +L + R++ ++ + LF + GW P I + P+ P
Sbjct: 6 SFVLLFIGF--MLFRKWRRLIALAA-VALFGLLATGWLAAPLIAWAEAGVA---PVARPD 59
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+IV+ G GT T + P +RI +T LY++C+Q + CT+++SGG
Sbjct: 60 MHGQTTLIVI-GAGTRRTDT----GLRPPPDGDARIRKTAALYRACRQQAQRCTVVMSGG 114
Query: 122 DPQKHGLAESIVYNNKLLESG 142
DPQ HG E+ VY +L+ +G
Sbjct: 115 DPQHHGETEAAVYGRQLVAAG 135
>gi|319783692|ref|YP_004143168.1| hypothetical protein Mesci_4004 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169580|gb|ADV13118.1| protein of unknown function DUF218 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 263
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 17/219 (7%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L+ + W + ++L L+ +QRP L P+ K DG IV+LG G + E +
Sbjct: 47 LILALSAWTSLGAMMLNPLEERFQRPPL-PE-KVDG--IVVLGGGFEGAINLARGGYELN 102
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK--HGLAESIVYNNKLLESGVERDDI 148
S R+ ET L + +++SGG G ++ L GV D +
Sbjct: 103 -SSGDRMVETAILARRFPT----AKVVVSGGTGALFLDGEGDAATAPRLLTALGVAADRM 157
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
LE +S +T++NA F+ ++ G+ +LV+SA+H+ R++ F G T DY
Sbjct: 158 ILENKSRNTYENAVFTKELVTPKPGETWLLVTSAFHMPRAKALFDKAGFATVPWPVDYRT 217
Query: 209 AYYSIIPL-----SANFYLTELALKEYIGILIAYYRGNR 242
+ + L + + T +A++E+IG L AY+ R
Sbjct: 218 SGREGVGLFRDNPADSLQATTMAIREWIG-LFAYWLSGR 255
>gi|255524874|ref|ZP_05391823.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|255511444|gb|EET87735.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
Length = 327
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R+ P + R+ + + +Y C+QH+ I++SGG ++E+ N L+E+G
Sbjct: 171 RVSPLLKG--RVDKAVHIYHKCRQHT---KIVVSGGKGDDEKISEAAAMKNYLVETGFPE 225
Query: 146 DDIKLETQSLDTFQNAQFSSSMIK-NMQGKNIILVSSAYHLKRSQLYFQHFGINTKA-SC 203
DDI LE QS TF+N + M+ N I V++ YH+ R+ LY + + C
Sbjct: 226 DDIILEEQSKTTFENLKNVKDMLDVNGVKHRYIFVTNNYHVFRTSLYAKKLKMKASGVGC 285
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+A +Y ++EYI I+ Y
Sbjct: 286 G------------TAAYYWPSAFIREYIAIMFRY 307
>gi|325295248|ref|YP_004281762.1| hypothetical protein Dester_1066 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065696|gb|ADY73703.1| protein of unknown function DUF218 [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 272
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 13/181 (7%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D IV+LG G ++ Q R++ +++K K+ I++SGG
Sbjct: 77 DCKAIVVLGGGEIFHSPAEGMKAAVKPQVAKRLYTAFKIWKKVKK-----PIVVSGGKVF 131
Query: 125 KHGL-AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ AES L+ G+ +I E++S +TFQN F+ ++ K I LV+SAY
Sbjct: 132 NENVEAESSAMKRFLISLGIPNKEIIEESKSKNTFQNGIFTYKILNKKGIKKICLVTSAY 191
Query: 184 HLKRSQLYFQHFGINTKASCSDY-LN----AYYSIIPLSANFYLTELALKEYIGILIAYY 238
H+ RS F+ G + +DY +N ++ S P + Y + L + EY+G IAY+
Sbjct: 192 HMPRSYRIFKSIGFSVIPVPADYRVNRGSYSWSSYFPRMEDLYDSFLGIHEYVG--IAYF 249
Query: 239 R 239
Sbjct: 250 E 250
>gi|45656706|ref|YP_000792.1| hypothetical protein LIC10815 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|294828296|ref|NP_713526.2| hypothetical protein LA_3345 [Leptospira interrogans serovar Lai
str. 56601]
gi|45599942|gb|AAS69429.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|293386147|gb|AAN50544.2| conserved hypothetical protein [Leptospira interrogans serovar Lai
str. 56601]
Length = 258
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 23/206 (11%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS--FQSYSRIFETMR 102
L++ L+ Y P +S + ++I++LG + + +I EP F S R+ ET+R
Sbjct: 63 LIQSLEMYY--PPVSLEQLPKADVILVLGGMVSTL----SIHDEPVDLFNSAERLTETVR 116
Query: 103 LYKSCKQHSMHCTIIISGGDPQK--HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
LY++ K I+ SGG + ES L + G+ + LE++S +T +N
Sbjct: 117 LYRAKKAPK----ILFSGGSGNLFYQTVPESEPAGRFLKQMGIPDSSLILESKSRNTAEN 172
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF 220
F+ ++K ++ILV+S++H+KRS FQ GI +D+ + S++ L NF
Sbjct: 173 KSFAVGLLKEHGWNSVILVTSSFHMKRSVEIFQENGITIIPFPTDF-RSQKSVLTLD-NF 230
Query: 221 YL-------TELALKEYIGILIAYYR 239
+ + +++KE+IGIL+ R
Sbjct: 231 FPSTGCLENSTISIKEWIGILVHKIR 256
>gi|158335605|ref|YP_001516777.1| hypothetical protein AM1_2455 [Acaryochloris marina MBIC11017]
gi|158305846|gb|ABW27463.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 261
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 34/233 (14%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN---IIVLLGNGTTIIPTI 82
++ +L FS GW + LL L+ Y P K+D I+VL G + P
Sbjct: 43 LALGILFFSANGW--VGDGLLYSLEHQY------PPLKQDATADAIVVLGGCTRSAHPPR 94
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAESIVYNNKLLE 140
P + + ++ R+ +LY+ K ++++GG + G AE++ L
Sbjct: 95 PWVEVS---EAGDRVLYAAKLYREGKAPK----VVLAGGRIYWKGGGQAEALDMAELLKI 147
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIK--NMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
GV + LE SL+TF+NA ++K N+ G ++LV+SA+H+ RS F+ G++
Sbjct: 148 MGVPESALLLEPDSLNTFENATNVKRVLKQNNIDGP-LLLVTSAFHMPRSMAIFETQGLS 206
Query: 199 TKASCSDY-----------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
A+ +DY L ++P T +A KE+IG L+ RG
Sbjct: 207 VIAAPTDYQVTEVNENAGFLGFVLRLLPDIEALVNTTIAFKEWIGFLMYRLRG 259
>gi|119485358|ref|ZP_01619686.1| hypothetical protein L8106_09461 [Lyngbya sp. PCC 8106]
gi|119457114|gb|EAW38240.1| hypothetical protein L8106_09461 [Lyngbya sp. PCC 8106]
Length = 263
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 89/189 (47%), Gaps = 24/189 (12%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG- 127
IV+LG GT PT P ++ ++ RI LYK K +I+SGG Q G
Sbjct: 80 IVVLGGGTKA-PTPPRPWVD-VGEAGDRILYGALLYKQDK----APWLILSGGRIQWDGK 133
Query: 128 -LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILVSSAYH 184
ES +E GV I + SL+T+QNA ++ N+ GK ++LV+SA H
Sbjct: 134 EPPESADMKEIAVEMGVRESAILQDPDSLNTYQNAVNVRQILAENNLTGK-VLLVTSALH 192
Query: 185 LKRSQLYFQHFGINTKASCSDYL-------------NAYYSIIPLSANFYLTELALKEYI 231
+ RS L FQ GI + +D+L ++IP + + ALKEYI
Sbjct: 193 MPRSLLVFQRQGIEVIPAPTDFLVSQQDLQPSTTIQGRILNLIPDTQSLQQFTQALKEYI 252
Query: 232 GILIAYYRG 240
G+++ RG
Sbjct: 253 GMIVYRLRG 261
>gi|91203844|emb|CAJ71497.1| conserver hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 263
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 31/230 (13%)
Query: 30 MLLFSFIGWG-IIPTILLKHLQFSYQRPLLSPQWKKD--GNI------IVLLGNGTTIIP 80
+LLF+F + + + ++ L++ Y PLLS Q D G I IV+L G T P
Sbjct: 46 ILLFAFFCYSSPVSKVFIRRLEYKYP-PLLSIQSSDDTRGAIVPEVKWIVVLAGGHTSDP 104
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG---DPQKHGLAESIVYNNK 137
IP I S ++ R+ E +RL++ + I++SGG DP ++ +
Sbjct: 105 DIP-ITSRVSGETLVRLAEGIRLHRLVPE----SRIVLSGGRVFDP----VSGAEAMAEL 155
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+ GVE + + L+++S DT A+F ++ N + ILV+SA H+ R+ F+ G+
Sbjct: 156 AMALGVEEESLILQSESKDTHDEAKFVKPIVGN---DHFILVTSANHMARAMGMFRKSGM 212
Query: 198 NTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + + + A P S F E EY+GIL A RG
Sbjct: 213 SPIPAPAGHTILKSQTTAPGDFFPSSHGFDKAEQVFYEYLGILWALLRGQ 262
>gi|291533114|emb|CBL06227.1| Uncharacterized conserved protein [Megamonas hypermegale ART12/1]
Length = 255
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 22/238 (9%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+F I YW + I+ + +S LLF + I L+K L+ YQ + Q K+D
Sbjct: 24 LFNIYLYW----KKIKGKYILSMITLLFYLLSTNFIAYHLVKPLENFYQNKTIE-QLKQD 78
Query: 66 GN-IIVLLGNGTTIIPTIPAIRIEPSFQSY--SRIFETMRLYKSCKQHSMHCTIIISGGD 122
N +I++LG G + I E Y +R+ MRL Q + II+SGG
Sbjct: 79 KNDVIIMLGGGAINVADIDG---EGQVSGYVANRMITVMRL-----QKELDIPIILSGGK 130
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ E+ + GV + LE QS +T +N Q S +++ ++++S
Sbjct: 131 VFEDTGREADIEKRIFEGMGVNSQALILENQSRNTVENVQNSKVIMEEYNFTKPLVITSG 190
Query: 183 YHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGIL 234
+HL R+ F I +DY + + ++ +P + + + +A++EY+GIL
Sbjct: 191 FHLLRAMEIFAREEIEATPYVADYQMSDELVFSIFNFLPNNGSLNTSCMAIREYLGIL 248
>gi|16330498|ref|NP_441226.1| hypothetical protein sll1606 [Synechocystis sp. PCC 6803]
gi|1652989|dbj|BAA17906.1| sll1606 [Synechocystis sp. PCC 6803]
Length = 262
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 31/214 (14%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG---TTIIPTIPAIRIEPSFQSYSRIFETM 101
LL+ L++ Y PQ +IV+LG G T P + ++ R+
Sbjct: 60 LLRTLEYQYLPMEDFPQ----APVIVVLGGGLYQATYPRQFPEVA-----EAGDRVIYGA 110
Query: 102 RLYKSCKQHSMHCTIIISGGD-PQKHGLAESIVYNNKLL--ESGVERDDIKLETQSLDTF 158
++Y+ K II +GG P +A S + LL V R+ I E +SL+T
Sbjct: 111 QIYQEGK----APYIITTGGRIPWLGTVATSEAEDMALLLQRLDVPREAIIKEEKSLNTR 166
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL----------- 207
QNA F+ +++ IILV+S YH+ R++ F+ GI + +D+L
Sbjct: 167 QNAVFTQKILQQRGINTIILVTSGYHMPRAKRVFEKLGIIVIPAATDFLSQPLGRNNFNL 226
Query: 208 -NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
N ++P + + +T +ALKEY+G++I +G
Sbjct: 227 ANVILGLMPDAKSLQMTTMALKEYLGLVIYKLQG 260
>gi|13470862|ref|NP_102431.1| hypothetical protein mll0674 [Mesorhizobium loti MAFF303099]
gi|14021605|dbj|BAB48217.1| mll0674 [Mesorhizobium loti MAFF303099]
Length = 265
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 21/221 (9%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L+ + W + ++L L+ + RP L PQ K DG IV+LG G + E S
Sbjct: 47 LILALSTWTSLGAMMLNPLEERFPRPPL-PQ-KVDG--IVVLGGGFEGAINLARGGYELS 102
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP----QKHGLAESIVYNNKLLESGVERD 146
S R+ ET L + +++SGG G A+S + L+ GV D
Sbjct: 103 -SSGDRMVETAILARRFPL----AKVVVSGGHGAFFIDAEGDADSA--SRMLVPLGVSAD 155
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+ LE +S +T++NA FS +++ G+ +LV+SA+H+ R++ F G T DY
Sbjct: 156 RLVLEDKSRNTYENAIFSRKLVEPKPGETWLLVTSAFHMPRAKALFDKAGFPTVPWPVDY 215
Query: 207 LNAYYSIIPLSANFYL-----TELALKEYIGILIAYYRGNR 242
+ + L + + T +AL+E+IG L AY+ R
Sbjct: 216 HTSGKEGVGLFRDNAIDSVQNTTIALREWIG-LFAYWLSGR 255
>gi|56476708|ref|YP_158297.1| hypothetical protein ebA2301 [Aromatoleum aromaticum EbN1]
gi|56312751|emb|CAI07396.1| probable transmembrane protein [Aromatoleum aromaticum EbN1]
Length = 258
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF--QSYSRI-FETMRLYKSCKQHSM 112
P L+ + IV++G G R P + ++ +R+ E +R Y + H +
Sbjct: 76 PPLTATSARPAEAIVIVGGGKR--------RHAPEYGGETVNRLTLERLR-YGARLAHGL 126
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERD----DIKLETQSLDTFQNAQFSSSMI 168
+++SGG P +L+++ +E D +E SLDT QNA+FS+ ++
Sbjct: 127 RLPVLVSGGAPTGE------RPEGELMKAALETDFGIIPRWVEASSLDTGQNAEFSAPLL 180
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY------YSIIPLSANFYL 222
K + ++LV+ A H++R++ F+ GI A+ + +L + + +P + + Y
Sbjct: 181 KAAGVRRVLLVTHAAHMRRARAEFEARGIEVIAAPTAWLGRHDANDQVLTALPSATSAYA 240
Query: 223 TELALKEYIGIL 234
A E++G+L
Sbjct: 241 GWYAAHEWLGLL 252
>gi|154249896|ref|YP_001410721.1| hypothetical protein Fnod_1217 [Fervidobacterium nodosum Rt17-B1]
gi|154153832|gb|ABS61064.1| protein of unknown function DUF218 [Fervidobacterium nodosum
Rt17-B1]
Length = 219
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 97/197 (49%), Gaps = 20/197 (10%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSY--QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
L F F+ + ++ L +L F+Y + + + G IV+LG G +E
Sbjct: 16 LAFLFLSFALVFYFLTSNL-FAYLISKTFVLKDTEDKGIFIVVLGGGVDEFSN----NVE 70
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
+ R+++ + LYK+ + II++GG K G+ E+++ N LL GV +DI
Sbjct: 71 IGKHTLRRLYKALELYKNRPRK-----IIVTGGIIDK-GVPEALIMKNVLLNFGVPEEDI 124
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS---- 204
L +++ +TF+N + + +I ++ I LV+S H+KRS F+ F + +
Sbjct: 125 ILGSKARNTFENGKCTFELIGDVP---ITLVTSTIHMKRSLFVFRKFFKDVSFVSADVPV 181
Query: 205 DYLNAYYSIIPLSANFY 221
D+ N+Y IP + FY
Sbjct: 182 DFRNSYLDYIPSANAFY 198
>gi|15964004|ref|NP_384357.1| hypothetical protein SMc00331 [Sinorhizobium meliloti 1021]
gi|15073180|emb|CAC41688.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
Length = 335
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 19/245 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-WGIIPTILLKHLQFSYQRPLLSPQ 61
L+++ L+V +L + R +S F L F+ + + L+ L+ + RP +P+
Sbjct: 90 LAFLALVVGVLLMLGRFRRSGGTLSAFGLAVLFVTLFTTAGSYFLQILEDRFPRP--TPE 147
Query: 62 WKKDGNIIVLLGN-GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IIVL G ++ + + + Q+ R ET+RL ++ Q I++SG
Sbjct: 148 PTELACIIVLGGAFENVVMASRGGMELN---QAAERFVETLRLAQAYPQ----ARILVSG 200
Query: 121 GDPQKHGLAESIVY--NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GD G+ E + N G+ D + E +S TF+NA+++ ++ + L
Sbjct: 201 GDGSLSGIYEGDAHASENFFGTFGIGSDRLIREGESRTTFENARYTRDLLAKNGLERCAL 260
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
V+SAYH+ RS F+ G+ +DY + + S N L A KE+ G
Sbjct: 261 VTSAYHMPRSIGLFRANGMEVTPWPTDYRTSGKVRLGFDFTQPSLNAQLATTAAKEWTG- 319
Query: 234 LIAYY 238
L+AYY
Sbjct: 320 LVAYY 324
>gi|291278482|ref|YP_003495317.1| hypothetical protein DEFDS_0049 [Deferribacter desulfuricans SSM1]
gi|290753184|dbj|BAI79561.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 237
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 17/174 (9%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + +V+LG G + S R+ E + K + II+SGG
Sbjct: 72 DFDAVVILGGGVYADGELKE-------DSLKRLVEGYLIAKKANK-----PIILSGGKVF 119
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
K+ ES++ NKLL G + +I ++ S DT +NA F +I ++L++S YH
Sbjct: 120 KNLEPESLIMRNKLLNLGFD-GEIFIDDTSKDTNENATFVKKIIAANNFNKVLLITSGYH 178
Query: 185 LKRSQLYFQHFGINTKASCSD-YLNAYYSII---PLSANFYLTELALKEYIGIL 234
RS++ F+ GIN+ D ++ Y+ + P+++N + +KEY+GIL
Sbjct: 179 AMRSKMLFEKHGINSCVVLVDKKIDKKYNFVDFLPVASNLHTISKVIKEYLGIL 232
>gi|307306416|ref|ZP_07586160.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
gi|306902258|gb|EFN32855.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
Length = 262
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 19/245 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-WGIIPTILLKHLQFSYQRPLLSPQ 61
L+++ L+V +L + R +S F L F+ + + L+ L+ + RP +P+
Sbjct: 17 LAFLALVVGVLLMLGRFRRSGGTLSAFGLAVLFVTLFTTAGSYFLQILEDRFPRP--TPE 74
Query: 62 WKKDGNIIVLLGN-GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IIVL G ++ + + + Q+ R ET+RL ++ Q I++SG
Sbjct: 75 PTELACIIVLGGAFENVVMASRGGMELN---QAAERFVETLRLAQAYPQ----ARILVSG 127
Query: 121 GDPQKHGLAESIVY--NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GD G+ E + N G+ D + E +S TF+NA+++ ++ + L
Sbjct: 128 GDGSLSGIYEGDAHASENFFGTFGIGSDRLIREGESRTTFENARYTRDLLAKNGLERCAL 187
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
V+SAYH+ RS F+ G+ +DY + + S N L A KE+ G
Sbjct: 188 VTSAYHMPRSIGLFRANGMEVTPWPTDYRTSGKVRLGFDFTQPSLNAQLATTAAKEWTG- 246
Query: 234 LIAYY 238
L+AYY
Sbjct: 247 LVAYY 251
>gi|298492074|ref|YP_003722251.1| hypothetical protein Aazo_3520 ['Nostoc azollae' 0708]
gi|298233992|gb|ADI65128.1| protein of unknown function DUF218 ['Nostoc azollae' 0708]
Length = 263
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 87/188 (46%), Gaps = 22/188 (11%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P ++ S +S R+ +LY+ K I++SGG G
Sbjct: 80 IVVLG-GATKSGVWPRPTVDLS-ESGDRVIYAAQLYRQKKAP----IIVLSGGRIDWRGS 133
Query: 129 A--ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
A ES L G+ + I E SL+T+QNA ++N K ++LV+SA H
Sbjct: 134 ASQESTDMAAILTSIGIPSEAIIQEPDSLNTYQNAVNVKETLENRGIKKVLLVTSAMHTP 193
Query: 187 RSQLYFQHFGINTKASCSDYL--------------NAYYSIIPLSANFYLTELALKEYIG 232
R+ FQ GI+ + +D+L A +++P + N Y ALKEYIG
Sbjct: 194 RALKIFQRQGIDVIPAPTDFLVSQGELQELTSSPKGAILNLLPDTTNLYQFTNALKEYIG 253
Query: 233 ILIAYYRG 240
+I RG
Sbjct: 254 SVIYSLRG 261
>gi|320530702|ref|ZP_08031746.1| hypothetical protein HMPREF9555_01853 [Selenomonas artemidis F0399]
gi|320136989|gb|EFW28927.1| hypothetical protein HMPREF9555_01853 [Selenomonas artemidis F0399]
Length = 258
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 20/180 (11%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE--- 88
+F + G + + + L+ +Y P PQ G++I++LG G I + + E
Sbjct: 54 VFYLLTTGAVADLFMGSLERTYPVPE-HPQ----GDVIIMLGGGA--IGGVQDVDGEGML 106
Query: 89 -PSFQSYSRIFETMRLYKSCKQHSMH-CTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS S RL + + H ++ I++SGG K E+ + L+ GV +
Sbjct: 107 APSPAS--------RLLTAVRLHRLYGLPILLSGGQVFKDTGTEAEIARRVLISLGVPEE 158
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I E++SL T QNA++S+ ++ + ILV+SA+HL R+ L F+ GI SD+
Sbjct: 159 QIYTESESLTTRQNARYSAEILHREGFTHPILVTSAFHLPRAVLNFEKLGIEVTPYPSDF 218
>gi|292670312|ref|ZP_06603738.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292648043|gb|EFF66015.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 252
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 21/185 (11%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI----IPT 81
++C + L S G L+ L+ +Y+ P+ PQ G+IIV+LG G +
Sbjct: 45 IACALYLLST---GAAADSLMGSLERTYEVPV-HPQ----GDIIVMLGGGAIADVRDVDG 96
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ PS SR+ +RL++ H I++SGG +E+ + L
Sbjct: 97 TGMLAQSPS----SRLLAVLRLHRR-----YHLPILLSGGQVFSDTGSEAEIARRVLRSL 147
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + I +ET S T QNA++S+ +++ + ILV+SA+HL R+ L F+ G+
Sbjct: 148 GVPSEMIYVETHSRTTGQNARYSAEILRREGFAHPILVTSAFHLPRAVLNFEKEGVAVTP 207
Query: 202 SCSDY 206
+D+
Sbjct: 208 YPTDF 212
>gi|110633719|ref|YP_673927.1| hypothetical protein Meso_1366 [Mesorhizobium sp. BNC1]
gi|110284703|gb|ABG62762.1| protein of unknown function DUF218 [Chelativorans sp. BNC1]
Length = 266
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 15/211 (7%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L+ + GW +LL L+ + RP +PQ DG I++LG G + E +
Sbjct: 47 LVVALAGWTTFGAMLLHPLESRFARPDPAPQ-HVDG--IIVLGGGFEGAVNLARGGYELN 103
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK--HGLAESIVYNNKLLESGVERDDI 148
S R E L + + +I+SGG G ++ L GV + I
Sbjct: 104 -DSGDRFVEAAILARRYPE----ARLIVSGGSGSVFLPGEGDADTAPRLLTALGVAPERI 158
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
+L+ +S DTF+NA+FS SM + + +LV+SA+H+ R+ F+ G +DY
Sbjct: 159 ELDNRSRDTFENARFSMSMAEPGPDETWLLVTSAFHMPRAVGAFRQAGFPILPWPADYKT 218
Query: 209 AYYSIIPLSANFYL-----TELALKEYIGIL 234
L+ + L T + ++E++G+L
Sbjct: 219 TGREKPGLTDDNVLDSLRNTSIGIREWVGLL 249
>gi|85715468|ref|ZP_01046449.1| hypothetical protein NB311A_17224 [Nitrobacter sp. Nb-311A]
gi|85697663|gb|EAQ35539.1| hypothetical protein NB311A_17224 [Nitrobacter sp. Nb-311A]
Length = 266
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 19/194 (9%)
Query: 60 PQWKKDG----NIIVLLGNGTTIIPTIPAIRIEPSFQSYS-RIFETMRLYKSCKQHSMHC 114
P W DG II+L G +I P + R + R+ + L Q
Sbjct: 70 PPWHFDGRAPDGIIIL---GGSIQPPLSVARQTVEIDGAAERVIGGLEL----AQRFPEA 122
Query: 115 TIIISGGDPQ-KHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++ SGG Q G A L E G+ + I LE +S T++NA+FS ++
Sbjct: 123 RVVYSGGSGQLTEGSAREAPIAGSLFERFGITPERIVLENESRTTYENARFSRELVAPKP 182
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSD-----YLNAYYSIIPLSANFYLTELAL 227
G+ +LV+SAYH+ RS F+ G + D +++A+ L+ ++A+
Sbjct: 183 GERWLLVTSAYHMPRSIGVFRKAGFEVEPYPVDWRTRGWIDAWRPFNRLTTGLACADIAV 242
Query: 228 KEYIGILIAYYRGN 241
E++G+L + G
Sbjct: 243 HEWVGLLAHWMAGR 256
>gi|152981868|ref|YP_001355267.1| hypothetical protein mma_3577 [Janthinobacterium sp. Marseille]
gi|151281945|gb|ABR90355.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 258
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 22/180 (12%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G A + PS + R+ LY++ H +++SGG P +
Sbjct: 84 IVVLGGGRISNALEYAGQDIPSSPTLHRLRYAATLYRTT-----HLPVLVSGGQPDGAAV 138
Query: 129 AESIVYNNKLLESGVERDDIK-----LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+E+ V L R+D LE S +T +NAQ S+ M++ K+I+LV+ A
Sbjct: 139 SEAAVMARVL------REDFSVPVRWLEQASNNTAENAQLSARMLREAGVKHILLVTDAM 192
Query: 184 HLKRSQLYFQHFGINTKASCSDYL-NAYYS---IIPLSANFYLTELALKEYIGILIAYYR 239
H++R++ F G+ A+ + ++ NA ++ +P S T AL E++G +A+YR
Sbjct: 193 HMQRAKQVFTQAGLKVVAAPTIFISNARHTPADFLPSSQWLQQTSYALHEWLG--LAWYR 250
>gi|238927939|ref|ZP_04659699.1| protein of hypothetical function DUF218 [Selenomonas flueggei ATCC
43531]
gi|238884272|gb|EEQ47910.1| protein of hypothetical function DUF218 [Selenomonas flueggei ATCC
43531]
Length = 253
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 18/173 (10%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI----IPTIPAIRIEPSFQSY 94
G + L+ L+ +Y P + PQ G++I++LG G + + + PS
Sbjct: 56 GAVSDRLMGELERTYPVPEV-PQ----GDVIIMLGGGAIADVQDVDGMGMLAQSPS---- 106
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
SR+ RL+ H I++SGG +E+ + L GV + I++ET+S
Sbjct: 107 SRLLAAYRLHLRT-----HLPILLSGGQVFSDTGSEAEIARRVLRSLGVPDEMIRVETRS 161
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
L T QNA +++ +++ + ILV+SA+HL R+ L F+ GI +D+L
Sbjct: 162 LTTGQNAHYTAEILRREGLMHPILVTSAFHLPRAVLNFEKQGITVTPYPTDFL 214
>gi|254481130|ref|ZP_05094376.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
gi|214038925|gb|EEB79586.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
Length = 245
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ + LYK+ K +++SGG E+ + ++ G+ + +E QS
Sbjct: 98 DRLTHAVSLYKAKKAP----LVLLSGGS-TTGSRPEAEQLRDYMVLMGLPDRALLMERQS 152
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----A 209
LDT QNA++S+ +++ + I+LV+SAYH+ R+ F+ G + +DY A
Sbjct: 153 LDTQQNARYSALILQGRDVRRILLVTSAYHMSRAVPLFERQGFEVIPAPTDYQRLVGKPA 212
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+P + + + + A+KEY+G L YYR
Sbjct: 213 VPRWLPTADDLWRSTAAIKEYVGFL--YYRAQ 242
>gi|313896016|ref|ZP_07829570.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975441|gb|EFR40902.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 258
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 20/180 (11%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE--- 88
+F + G + + + L+ +Y P PQ G++I++LG G I + + E
Sbjct: 54 VFYLLTTGAVADLFMGSLERTYPVPE-HPQ----GDVIIMLGGGA--IGGVQDVDGEGML 106
Query: 89 -PSFQSYSRIFETMRLYKSCKQHSMH-CTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS S RL + + H ++ I++SGG K E+ + L+ GV +
Sbjct: 107 APSPAS--------RLLTAVRLHRLYGLPILLSGGQVFKDTGTEAEIARRVLISLGVPEE 158
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I E++SL T QNA++S+ ++ + ILV+SA+HL R+ L F+ GI SD+
Sbjct: 159 QIYTESESLTTGQNARYSAEILHREGFMHPILVTSAFHLPRAVLNFEKLGIEVTPYPSDF 218
>gi|300691119|ref|YP_003752114.1| hypothetical protein RPSI07_1461 [Ralstonia solanacearum PSI07]
gi|299078179|emb|CBJ50822.1| conserved exported protein of unknown function [Ralstonia
solanacearum PSI07]
Length = 265
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
+Y + H+ ++ +GG P+ G+ E+ + + + G +D +ET+S T +NA
Sbjct: 119 VYAARLAHTARLPVLATGGAPEGDGVPEAELMRRLVADMG--QDARWIETRSATTEENAA 176
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG-INTKASCS-------DYLNAYYSII 214
FS+ +++ + I LV+ +H+ R++ YF+ G I T A C S++
Sbjct: 177 FSAPILRAAGIQRIYLVTHYWHMARARRYFEGQGFIVTPAPCGWGGEVEESPAGGILSLL 236
Query: 215 PLSANFYLTELALKEYIGIL 234
P + LT AL+E +G L
Sbjct: 237 PRTDGLMLTRFALREALGQL 256
>gi|315145674|gb|EFT89690.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
gi|315160239|gb|EFU04256.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
Length = 401
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 24/184 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIII 118
P++ +D IV+LG+G +P P Q+ RI + ++ YK+ + +++ I++
Sbjct: 214 PKYTQD--YIVVLGSGLINGEIVP-----PLLQA--RINKAIQFYKAQNRATLNPPKIVM 264
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNI- 176
SGG L ES+ L G+ DDI +E S +T +N +FS +MI++ N
Sbjct: 265 SGGQGPDELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQ 324
Query: 177 -ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ YHL R+ L+ + G+ + +A ++L+ ++E+I I++
Sbjct: 325 AIFTTNNYHLFRAGLFARMAGLKADGIGAK-----------TAFYFLSNAFIREFIAIVV 373
Query: 236 AYYR 239
Y R
Sbjct: 374 MYKR 377
>gi|330829535|ref|YP_004392487.1| integral membrane protein [Aeromonas veronii B565]
gi|328804671|gb|AEB49870.1| Integral membrane protein [Aeromonas veronii B565]
Length = 256
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LGNG P +P +R + S +R E +RL ++ + + +SG L
Sbjct: 83 IVVLGNGHVSDPAVP-MRSWQNNISLARTLEGVRLAQAYPDAELVFSGYVSGDT-----L 136
Query: 129 AESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ + V N ++ ES G+ R + L + DT A S+ ++++GK + LVSSA HL R
Sbjct: 137 SNAEV-NARMAESLGIPRSRMTLFENNKDTHDEA---VSISRHLKGKEVALVSSATHLPR 192
Query: 188 SQLYFQHFGINTKASCSDYL-------NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +Q G+ + +DY YS +P +E A+ E+IG+ A RG
Sbjct: 193 AMALYQGQGLKAVPAPTDYTAKQSQVPQPLYSYLPKGRYLMYSEAAIHEWIGVWWARLRG 252
>gi|254555567|ref|YP_003061984.1| integral membrane protein [Lactobacillus plantarum JDM1]
gi|254044494|gb|ACT61287.1| integral membrane protein [Lactobacillus plantarum JDM1]
Length = 340
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 97/212 (45%), Gaps = 18/212 (8%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
L+ F+G ++ T F+Y ++ + + I ++ G ++P +P+
Sbjct: 126 LWQFLGLALLLTAYFAFSFFAYLLACVTTRLGRHRQIDYMIVLGAGLMPNG-----QPTR 180
Query: 92 QSYSRIFETMRLYKSCK-QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R+ + Y++ + ++ TI++SGG +AES L++ GV RD I+
Sbjct: 181 TLAYRLQAAAKYYRAQRARYHQPITIVVSGGQGPDEVMAESTAMRQYLVDQGVPRDAIQE 240
Query: 151 ETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
E QS T +N +FS ++I Q ++V+S YH+ R+ ++ + +N +
Sbjct: 241 ENQSTSTIENLKFSHALIVRQQPFYRAVIVTSGYHVLRANIFARQLHLNLTGIGAH---- 296
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
PL +YL +EY+ +++ Y N
Sbjct: 297 ----TPL---YYLPFAMFREYLALIVMYRWAN 321
>gi|269120749|ref|YP_003308926.1| hypothetical protein Sterm_2141 [Sebaldella termitidis ATCC 33386]
gi|268614627|gb|ACZ08995.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 346
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 12/136 (8%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K+ + IV LG T+ + I+ Q+Y E RL + + II++GG
Sbjct: 174 KNADFIVTLGYALNNDGTMNEVLIKRLEQTY----EAARL-------NPNANIIVTGG-V 221
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
QK GL ES + N L+E G+ D + +E ++ DT +NA +S+ ++K K +IL++SA
Sbjct: 222 QKGGLTESYLMKNWLVEKGIAADRVIIEDKARDTVENAIYSTEILKKYNPKRVILITSAS 281
Query: 184 HLKRSQLYFQHFGINT 199
H++R Q N
Sbjct: 282 HIRRGTALLQEAADNA 297
>gi|251778604|ref|ZP_04821524.1| integral membrane protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243082919|gb|EES48809.1| integral membrane protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 357
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 23/182 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P+ +D I++LG+G + R+ P S RI + ++ Y Q + II S
Sbjct: 170 PKLNQD--FIIVLGSG------LIGDRVPPLLGS--RIEKAIKFYNKQSQVTNPPKIIFS 219
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNII 177
GG ++E+ + G+ +D LE S+ T +N +FS S+++N+ +G I
Sbjct: 220 GGQGPDEKVSEAFTMQKYAVNKGIPIEDTILEDNSVSTLENMKFSKSIMENLMPEGYRSI 279
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ YHL R+ +Y + GI ++ S +A ++L ++EYI I++ Y
Sbjct: 280 FTTNNYHLFRAGIYARIAGIKSQGIGSK-----------TALYFLPNAMIREYIAIVVMY 328
Query: 238 YR 239
+
Sbjct: 329 KK 330
>gi|299822466|ref|ZP_07054352.1| conserved domain protein [Listeria grayi DSM 20601]
gi|299815995|gb|EFI83233.1| conserved domain protein [Listeria grayi DSM 20601]
Length = 339
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 23/185 (12%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P+ KD I++ G +P + A R++ + Q + K K+ T I+
Sbjct: 156 GPRLNKDFIIVLGCGLKGKKVPQLLANRLDKAIQFHR---------KQQKKRGRTATFIV 206
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI-- 176
SGG +AE+ L++ G+ ++ I +E S +T +N QFS ++ ++Q KN
Sbjct: 207 SGGKGPNEEIAEARAMQAYLIDKGIPKEQIFMEADSTNTEENMQFSKKLMTSIQ-KNFKS 265
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ V++ +HL R+ +Y + G++ + +A +YL L+E+I +L
Sbjct: 266 VFVTNNFHLFRASIYARKAGLDAQGIGGK-----------TALYYLPTALLREFIAVLFL 314
Query: 237 YYRGN 241
Y + +
Sbjct: 315 YRKAH 319
>gi|92117952|ref|YP_577681.1| hypothetical protein Nham_2431 [Nitrobacter hamburgensis X14]
gi|91800846|gb|ABE63221.1| protein of unknown function DUF218 [Nitrobacter hamburgensis X14]
Length = 267
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLS----------PQWKKDG----NIIVLLGNGTTIIPTI 82
G G++ T ++ L F Y PL + P W DG II+L G I P +
Sbjct: 38 GTGLLATGVMALLIFGYS-PLGNVLLLTLSERFPAWHFDGREPDGIIIL---GGAIEPEL 93
Query: 83 PAIRIEPSFQSYS-RIFETMRLYKSCKQHSMHCTIIISGG------DPQKHGLAESIVYN 135
A R + RI + L + + ++ SGG DP ++E+ +
Sbjct: 94 SAARKAVEVNGAAERIIGGLELARRFPR----ARVVYSGGSANLIADP----VSEAPIAG 145
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L G+ + I LE++S T +NA+F+ ++ G+ +LV+SAYH+ RS F+
Sbjct: 146 RLLETFGISPERIVLESESRTTDENARFTRKLVSPKPGERWLLVTSAYHMPRSIGVFRKA 205
Query: 196 GINTKASCSD-----YLNAYYSIIPLSANFYLTELALKEYIGIL 234
G++ +A D +++A+ LSA + A+ E+ G+L
Sbjct: 206 GLDVEAYPVDWRTRGWIDAWTPFDRLSAGLARADTAVHEWCGLL 249
>gi|254479072|ref|ZP_05092426.1| conserved hypothetical protein [Carboxydibrachium pacificum DSM
12653]
gi|214034988|gb|EEB75708.1| conserved hypothetical protein [Carboxydibrachium pacificum DSM
12653]
Length = 192
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ + KK IIVL G + P+ P F+ R+ E ++LYK H II
Sbjct: 31 FTEKPKKSDAIIVL---GCAVYGDTPS----PFFKE--RLEEALKLYKEGYGH----YII 77
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGG ++E+ LLE GV +I L+ +S T++N FS +++ K I
Sbjct: 78 ISGGKGPGESISEAEAGKRYLLEKGVASKNILLDNKSFSTYENLLFSKEIMEKNSLKTAI 137
Query: 178 LVSSAYHLKRSQLYFQHFGINTKAS 202
+VS+ +HLKR+ + + GI+ S
Sbjct: 138 IVSNKFHLKRASVIAKRIGIDASFS 162
>gi|134096504|ref|YP_001101579.1| hypothetical protein HEAR3355 [Herminiimonas arsenicoxydans]
gi|133740407|emb|CAL63458.1| Conserved hypothetical protein; putative exported protein
[Herminiimonas arsenicoxydans]
Length = 256
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 23/191 (12%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK-QHSMHC 114
PLLS + I+VL G + P E Q RL + K Q
Sbjct: 72 PLLSAKAAGAQAIVVLGGGRISNAP-------EYGGQDIPAAITLQRLRYAAKLQRETGL 124
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL-----ETQSLDTFQNAQFSSSMIK 169
+++SGG P +E+ LL DD + E S +T +NAQFSS +++
Sbjct: 125 PLLVSGGRPDGASESEAAGMARVLL------DDFSVPVKWQEEMSNNTAENAQFSSRVLR 178
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP--LSANFYLTELAL 227
+ I+LV+ A H++R+++ FQ G+ + + + +A +P L + ++ AL
Sbjct: 179 AAGVQRILLVTDAIHMQRAKIAFQQAGLQVVPAATLFTSAARVTLPDFLPTSLHMASYAL 238
Query: 228 KEYIGILIAYY 238
+E++G +A+Y
Sbjct: 239 REWLG--LAWY 247
>gi|319947009|ref|ZP_08021243.1| hypothetical protein HMPREF9421_1424 [Streptococcus australis ATCC
700641]
gi|319747057|gb|EFV99316.1| hypothetical protein HMPREF9421_1424 [Streptococcus australis ATCC
700641]
Length = 342
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 90/180 (50%), Gaps = 27/180 (15%)
Query: 63 KKDGNIIVLLGNGT--TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+K+ + I++LG+G +P + A R+ Y +Q +I+SG
Sbjct: 157 RKEPDAIIVLGSGLIGDKVPPLLAQRLTKGKAIY-------------EQFEGRPKLIVSG 203
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILV 179
G +E+ N L+E GV ++DI +E +S TF+N FS +++++ GK++++V
Sbjct: 204 GQGADELTSEATAMANYLIEQGVPKEDILIENRSRTTFENLTFSKAILEDQGLGKSVLVV 263
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++++H R+ ++ + I ++ S +A +YL ++E +G++ Y++
Sbjct: 264 TNSFHALRAGVFMRRLKIPGRSVGSK-----------TAFYYLPSAWIRETVGLVSLYWK 312
>gi|255975975|ref|ZP_05426561.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|255968847|gb|EET99469.1| conserved hypothetical protein [Enterococcus faecalis T2]
Length = 366
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIII 118
P++ +D IV+LG+G +P P Q+ RI + ++ YK+ + +++ I++
Sbjct: 179 PKYTQD--YIVVLGSGLINGEIVP-----PLLQA--RINKAIQFYKAQNRATLNPPKIVM 229
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNI- 176
SGG L ES+ L G+ DDI +E S +T +N +FS +MI++ N
Sbjct: 230 SGGQGPDELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQ 289
Query: 177 -ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ YHL R+ L+ + G+ + +A ++L ++E+I I++
Sbjct: 290 AIFTTNNYHLFRAGLFARMAGLKADGIGAK-----------TAFYFLPNAFIREFIAIVV 338
Query: 236 AYYR 239
Y R
Sbjct: 339 MYQR 342
>gi|255972921|ref|ZP_05423507.1| predicted protein [Enterococcus faecalis T1]
gi|256762373|ref|ZP_05502953.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|255963939|gb|EET96415.1| predicted protein [Enterococcus faecalis T1]
gi|256683624|gb|EEU23319.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|315030014|gb|EFT41946.1| conserved hypothetical protein [Enterococcus faecalis TX4000]
Length = 366
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIII 118
P++ +D IV+LG+G +P P Q+ RI + ++ YK+ + +++ I++
Sbjct: 179 PKYTQD--YIVVLGSGLINGEIVP-----PLLQA--RINKAIQFYKAQNRATLNPPKIVM 229
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNI- 176
SGG L ES+ L G+ DDI +E S +T +N +FS +MI++ N
Sbjct: 230 SGGQGPDELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQ 289
Query: 177 -ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ YHL R+ L+ + G+ + +A ++L ++E+I I++
Sbjct: 290 AIFTTNNYHLFRAGLFARMAGLKADGIGAK-----------TAFYFLPNAFIREFIAIVV 338
Query: 236 AYYR 239
Y R
Sbjct: 339 MYKR 342
>gi|312904109|ref|ZP_07763277.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|310632585|gb|EFQ15868.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|315578454|gb|EFU90645.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
Length = 401
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIII 118
P++ +D IV+LG+G +P P Q+ RI + ++ YK+ + +++ I++
Sbjct: 214 PRYTQD--YIVVLGSGLINGEIVP-----PLLQA--RINKAIQFYKAQNRATLNPPKIVM 264
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNI- 176
SGG L ES+ L G+ DDI +E S +T +N +FS +MI++ N
Sbjct: 265 SGGQGPDELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQ 324
Query: 177 -ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ YHL R+ L+ + G+ + +A ++L ++E+I I++
Sbjct: 325 AIFTTNNYHLFRAGLFARMAGLKADGIGAK-----------TAFYFLPNAFIREFIAIVV 373
Query: 236 AYYR 239
Y R
Sbjct: 374 MYKR 377
>gi|153873460|ref|ZP_02002036.1| Protein of unknown function DUF218 [Beggiatoa sp. PS]
gi|152070073|gb|EDN67963.1| Protein of unknown function DUF218 [Beggiatoa sp. PS]
Length = 195
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 10/145 (6%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGD-PQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
R+ RLY + K I++SGG P + E+ L E GV + E
Sbjct: 46 DRVIHAARLYHAGKA----PLILVSGGTLPWRKVPPEADAMRAFLEELGVPTKAVMSEPD 101
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-----N 208
S+ T++NA FS ++ N I+LV+SA+H++RS F+ G + +D+
Sbjct: 102 SITTYENALFSKKLLDNKGIHKILLVTSAFHMRRSAAVFRKVGFEVIPAPTDFRVVKNPP 161
Query: 209 AYYSIIPLSANFYLTELALKEYIGI 233
+ + +P + T +A+KEYIG+
Sbjct: 162 SLFDYLPDVRYLHQTTIAIKEYIGL 186
>gi|307279173|ref|ZP_07560231.1| hypothetical protein HMPREF9515_01492 [Enterococcus faecalis
TX0860]
gi|306504298|gb|EFM73510.1| hypothetical protein HMPREF9515_01492 [Enterococcus faecalis
TX0860]
Length = 401
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIII 118
P++ +D IV+LG+G +P P Q+ RI + ++ YK+ + +++ I++
Sbjct: 214 PKYTQD--YIVVLGSGLINGEIVP-----PLLQA--RINKAIQFYKAQNRATLNPPKIVM 264
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNI- 176
SGG L ES+ L G+ DDI +E S +T +N +FS +MI++ N
Sbjct: 265 SGGQGPDELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQ 324
Query: 177 -ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ YHL R+ L+ + G+ + +A ++L ++E+I I++
Sbjct: 325 AIFTTNNYHLFRAGLFARMAGLKADGIGAK-----------TAFYFLPNAFIREFIAIVV 373
Query: 236 AYYR 239
Y R
Sbjct: 374 MYQR 377
>gi|256618946|ref|ZP_05475792.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256965248|ref|ZP_05569419.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|256598473|gb|EEU17649.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256955744|gb|EEU72376.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
Length = 359
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIII 118
P++ +D IV+LG+G +P P Q+ RI + ++ YK+ + +++ I++
Sbjct: 172 PRYTQD--YIVVLGSGLINGEIVP-----PLLQA--RINKAIQFYKAQNRATLNPPKIVM 222
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNI- 176
SGG L ES+ L G+ DDI +E S +T +N +FS +MI++ N
Sbjct: 223 SGGQGPDELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQ 282
Query: 177 -ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ YHL R+ L+ + G+ + +A ++L ++E+I I++
Sbjct: 283 AIFTTNNYHLFRAGLFARMAGLKADGIGAK-----------TAFYFLPNAFIREFIAIVV 331
Query: 236 AYYR 239
Y R
Sbjct: 332 MYKR 335
>gi|206969698|ref|ZP_03230652.1| conserved domain protein [Bacillus cereus AH1134]
gi|206735386|gb|EDZ52554.1| conserved domain protein [Bacillus cereus AH1134]
Length = 277
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 111/242 (45%), Gaps = 39/242 (16%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L S +FL +S ++ IF + ++ FI + L + + + RP
Sbjct: 40 ILFSILFLFISPASFFSSHLQPIFGGISLITIYFFIH---LSNFLSAYFLYQFNRP---- 92
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC--TI 116
+++ + I++LG+G +P + A RI + Y KQ +++ TI
Sbjct: 93 --RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY------------WKQAAVNTPPTI 138
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK 174
I SGG GL E+ N +E G+ + E +S++T+QN FS ++ ++ +GK
Sbjct: 139 IFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGK 198
Query: 175 -NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
I ++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I
Sbjct: 199 YKSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAI 247
Query: 234 LI 235
++
Sbjct: 248 VV 249
>gi|29375933|ref|NP_815087.1| hypothetical protein EF1366 [Enterococcus faecalis V583]
gi|256853003|ref|ZP_05558373.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256958856|ref|ZP_05563027.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256962050|ref|ZP_05566221.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|257078888|ref|ZP_05573249.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|257082665|ref|ZP_05577026.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|257086869|ref|ZP_05581230.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|257415976|ref|ZP_05592970.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
gi|257419178|ref|ZP_05596172.1| predicted protein [Enterococcus faecalis T11]
gi|257422744|ref|ZP_05599734.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|29343395|gb|AAO81157.1| conserved hypothetical protein [Enterococcus faecalis V583]
gi|256711462|gb|EEU26500.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256949352|gb|EEU65984.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256952546|gb|EEU69178.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256986918|gb|EEU74220.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|256990695|gb|EEU77997.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|256994899|gb|EEU82201.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|257157804|gb|EEU87764.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
gi|257161006|gb|EEU90966.1| predicted protein [Enterococcus faecalis T11]
gi|257164568|gb|EEU94528.1| conserved hypothetical protein [Enterococcus faecalis X98]
Length = 359
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIII 118
P++ +D IV+LG+G +P P Q+ RI + ++ YK+ + +++ I++
Sbjct: 172 PKYTQD--YIVVLGSGLINGEIVP-----PLLQA--RINKAIQFYKAQNRATLNPPKIVM 222
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNI- 176
SGG L ES+ L G+ DDI +E S +T +N +FS +MI++ N
Sbjct: 223 SGGQGPDELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQ 282
Query: 177 -ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ YHL R+ L+ + G+ + +A ++L ++E+I I++
Sbjct: 283 AIFTTNNYHLFRAGLFARMAGLKADGIGAK-----------TAFYFLPNAFIREFIAIVV 331
Query: 236 AYYR 239
Y R
Sbjct: 332 MYKR 335
>gi|257085374|ref|ZP_05579735.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
gi|256993404|gb|EEU80706.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
Length = 359
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIII 118
P++ +D IV+LG+G +P P Q+ RI + ++ YK+ + +++ I++
Sbjct: 172 PKYTQD--YIVVLGSGLINGEIVP-----PLLQA--RINKAIQFYKAQNRATLNPPKIVM 222
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNI- 176
SGG L ES+ L G+ DDI +E S +T +N +FS +MI++ N
Sbjct: 223 SGGQGPDELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQ 282
Query: 177 -ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ YHL R+ L+ + G+ + +A ++L ++E+I I++
Sbjct: 283 AIFTTNNYHLFRAGLFARMAGLKADGIGAK-----------TAFYFLPNAFIREFIAIVV 331
Query: 236 AYYR 239
Y R
Sbjct: 332 MYKR 335
>gi|307273352|ref|ZP_07554597.1| hypothetical protein HMPREF9514_02117 [Enterococcus faecalis
TX0855]
gi|306509879|gb|EFM78904.1| hypothetical protein HMPREF9514_02117 [Enterococcus faecalis
TX0855]
Length = 401
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIII 118
P++ +D IV+LG+G +P P Q+ RI + ++ YK+ + +++ I++
Sbjct: 214 PRYTQD--YIVVLGSGLINGEIVP-----PLLQA--RINKAIQFYKAQNRATLNPPKIVM 264
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNI- 176
SGG L ES+ L G+ DDI +E S +T +N +FS +MI++ N
Sbjct: 265 SGGQGPDELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQ 324
Query: 177 -ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ YHL R+ L+ + G+ + +A ++L ++E+I I++
Sbjct: 325 AIFTTNNYHLFRAGLFARMAGLKADGIGAK-----------TAFYFLPNAFIREFIAIVV 373
Query: 236 AYYR 239
Y R
Sbjct: 374 MYKR 377
>gi|229181123|ref|ZP_04308455.1| hypothetical protein bcere0005_44660 [Bacillus cereus 172560W]
gi|228602314|gb|EEK59803.1| hypothetical protein bcere0005_44660 [Bacillus cereus 172560W]
Length = 280
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 111/242 (45%), Gaps = 39/242 (16%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L S +FL +S ++ IF + ++ FI + L + + + RP
Sbjct: 43 ILFSILFLFISPASFFSSHLQPIFGGISLITIYFFIH---LSNFLSAYFLYQFNRP---- 95
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC--TI 116
+++ + I++LG+G +P + A RI + Y KQ +++ TI
Sbjct: 96 --RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY------------WKQAAVNTPPTI 141
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK 174
I SGG GL E+ N +E G+ + E +S++T+QN FS ++ ++ +GK
Sbjct: 142 IFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGK 201
Query: 175 -NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
I ++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I
Sbjct: 202 YKSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAI 250
Query: 234 LI 235
++
Sbjct: 251 VV 252
>gi|227518630|ref|ZP_03948679.1| integral membrane protein [Enterococcus faecalis TX0104]
gi|227553161|ref|ZP_03983210.1| integral membrane protein [Enterococcus faecalis HH22]
gi|229545952|ref|ZP_04434677.1| integral membrane protein [Enterococcus faecalis TX1322]
gi|229550144|ref|ZP_04438869.1| integral membrane protein [Enterococcus faecalis ATCC 29200]
gi|293383072|ref|ZP_06628990.1| putative membrane protein [Enterococcus faecalis R712]
gi|293387775|ref|ZP_06632319.1| putative membrane protein [Enterococcus faecalis S613]
gi|294779558|ref|ZP_06744952.1| putative membrane protein [Enterococcus faecalis PC1.1]
gi|300860460|ref|ZP_07106547.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|307271145|ref|ZP_07552428.1| hypothetical protein HMPREF9498_03231 [Enterococcus faecalis
TX4248]
gi|307288139|ref|ZP_07568149.1| hypothetical protein HMPREF9505_01545 [Enterococcus faecalis
TX0109]
gi|307291350|ref|ZP_07571234.1| hypothetical protein HMPREF9509_01659 [Enterococcus faecalis
TX0411]
gi|312900627|ref|ZP_07759924.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|312907338|ref|ZP_07766329.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|312909955|ref|ZP_07768803.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|312952369|ref|ZP_07771244.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|227073925|gb|EEI11888.1| integral membrane protein [Enterococcus faecalis TX0104]
gi|227177687|gb|EEI58659.1| integral membrane protein [Enterococcus faecalis HH22]
gi|229304730|gb|EEN70726.1| integral membrane protein [Enterococcus faecalis ATCC 29200]
gi|229308915|gb|EEN74902.1| integral membrane protein [Enterococcus faecalis TX1322]
gi|291079737|gb|EFE17101.1| putative membrane protein [Enterococcus faecalis R712]
gi|291082845|gb|EFE19808.1| putative membrane protein [Enterococcus faecalis S613]
gi|294453348|gb|EFG21756.1| putative membrane protein [Enterococcus faecalis PC1.1]
gi|300849499|gb|EFK77249.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|306497581|gb|EFM67114.1| hypothetical protein HMPREF9509_01659 [Enterococcus faecalis
TX0411]
gi|306500875|gb|EFM70193.1| hypothetical protein HMPREF9505_01545 [Enterococcus faecalis
TX0109]
gi|306512643|gb|EFM81292.1| hypothetical protein HMPREF9498_03231 [Enterococcus faecalis
TX4248]
gi|310626366|gb|EFQ09649.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|310629753|gb|EFQ13036.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|311289913|gb|EFQ68469.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|311292108|gb|EFQ70664.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|315027393|gb|EFT39325.1| conserved hypothetical protein [Enterococcus faecalis TX2137]
gi|315033767|gb|EFT45699.1| conserved hypothetical protein [Enterococcus faecalis TX0017]
gi|315036853|gb|EFT48785.1| conserved hypothetical protein [Enterococcus faecalis TX0027]
gi|315147862|gb|EFT91878.1| conserved hypothetical protein [Enterococcus faecalis TX4244]
gi|315150660|gb|EFT94676.1| conserved hypothetical protein [Enterococcus faecalis TX0012]
gi|315153332|gb|EFT97348.1| conserved hypothetical protein [Enterococcus faecalis TX0031]
gi|315155890|gb|EFT99906.1| conserved hypothetical protein [Enterococcus faecalis TX0043]
gi|315157942|gb|EFU01959.1| conserved hypothetical protein [Enterococcus faecalis TX0312]
gi|315164245|gb|EFU08262.1| conserved hypothetical protein [Enterococcus faecalis TX1302]
gi|315166661|gb|EFU10678.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
gi|315170055|gb|EFU14072.1| conserved hypothetical protein [Enterococcus faecalis TX1342]
gi|315575579|gb|EFU87770.1| conserved hypothetical protein [Enterococcus faecalis TX0309B]
gi|315579979|gb|EFU92170.1| conserved hypothetical protein [Enterococcus faecalis TX0309A]
gi|323480601|gb|ADX80040.1| conserved hypothetical protein [Enterococcus faecalis 62]
gi|327535007|gb|AEA93841.1| integral membrane protein [Enterococcus faecalis OG1RF]
Length = 401
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIII 118
P++ +D IV+LG+G +P P Q+ RI + ++ YK+ + +++ I++
Sbjct: 214 PKYTQD--YIVVLGSGLINGEIVP-----PLLQA--RINKAIQFYKAQNRATLNPPKIVM 264
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNI- 176
SGG L ES+ L G+ DDI +E S +T +N +FS +MI++ N
Sbjct: 265 SGGQGPDELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQ 324
Query: 177 -ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ YHL R+ L+ + G+ + +A ++L ++E+I I++
Sbjct: 325 AIFTTNNYHLFRAGLFARMAGLKADGIGAK-----------TAFYFLPNAFIREFIAIVV 373
Query: 236 AYYR 239
Y R
Sbjct: 374 MYKR 377
>gi|307277497|ref|ZP_07558589.1| hypothetical protein HMPREF9521_03090 [Enterococcus faecalis
TX2134]
gi|306505762|gb|EFM74940.1| hypothetical protein HMPREF9521_03090 [Enterococcus faecalis
TX2134]
Length = 401
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIII 118
P++ +D IV+LG+G +P P Q+ RI + ++ YK+ + +++ I++
Sbjct: 214 PKYTQD--YIVVLGSGLINGEIVP-----PLLQA--RINKAIQFYKAQNRATLNPPKIVM 264
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNI- 176
SGG L ES+ L G+ DDI +E S +T +N +FS +MI++ N
Sbjct: 265 SGGQGPDELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQ 324
Query: 177 -ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ YHL R+ L+ + G+ + +A ++L ++E+I I++
Sbjct: 325 AIFTTNNYHLFRAGLFARMAGLKADGIGAK-----------TAFYFLPNAFIREFIAIVV 373
Query: 236 AYYR 239
Y R
Sbjct: 374 MYKR 377
>gi|257089760|ref|ZP_05584121.1| predicted protein [Enterococcus faecalis CH188]
gi|256998572|gb|EEU85092.1| predicted protein [Enterococcus faecalis CH188]
Length = 359
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIII 118
P++ +D IV+LG+G +P P Q+ RI + ++ YK+ + +++ I++
Sbjct: 172 PRYTQD--YIVVLGSGLINGEIVP-----PLLQA--RINKAIQFYKAQNRATLNPPKIVM 222
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNI- 176
SGG L ES+ L G+ DDI +E S +T +N +FS +MI++ N
Sbjct: 223 SGGQGPDELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQ 282
Query: 177 -ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ YHL R+ L+ + G+ + +A ++L ++E+I I++
Sbjct: 283 AIFTTNNYHLFRAGLFARMAGLKADGIGAK-----------TAFYFLPNAFIREFIAIVV 331
Query: 236 AYYR 239
Y R
Sbjct: 332 MYKR 335
>gi|288817420|ref|YP_003431767.1| hypothetical protein HTH_0099 [Hydrogenobacter thermophilus TK-6]
gi|288786819|dbj|BAI68566.1| conserved hypothetical protein [Hydrogenobacter thermophilus TK-6]
gi|308751027|gb|ADO44510.1| protein of unknown function DUF218 [Hydrogenobacter thermophilus
TK-6]
Length = 240
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY 104
LL L+ Y P K + IV+LG G+ + S R+ + L+
Sbjct: 58 LLTPLESKYSVP-----EKFQADAIVVLGGGSYSTGILKE-------DSMKRLLTALILH 105
Query: 105 KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
K I++SGG L ++ + + L+E GV++ DI E +S DT +NA +
Sbjct: 106 KRT-----GLPIVLSGG---AENLPDAEIMKSLLVELGVDKRDIITEVRSRDTEENASYV 157
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANF 220
+ + K+++LV+SAYHL R+ F+ G++ +D+ YS++P +
Sbjct: 158 REICQQRNYKSVVLVTSAYHLPRAVFLFKKEGLSVIPYPTDFKRDLRYNLYSLLPKMSVL 217
Query: 221 YLTELALKEYIGIL 234
+ AL+EY+ +L
Sbjct: 218 NDSVKALREYVALL 231
>gi|315174445|gb|EFU18462.1| conserved hypothetical protein [Enterococcus faecalis TX1346]
Length = 401
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIII 118
P++ +D IV+LG+G +P P Q+ RI + ++ YK+ + +++ I++
Sbjct: 214 PKYTQD--YIVVLGSGLINGEIVP-----PLLQA--RINKAIQFYKAQNRATLNPPKIVM 264
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNI- 176
SGG L ES+ L G+ DDI +E S +T +N +FS +MI++ N
Sbjct: 265 SGGQGPDELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQ 324
Query: 177 -ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ YHL R+ L+ + G+ + +A ++L ++E+I I++
Sbjct: 325 AIFTTNNYHLFRAGLFARMAGLKADGIGAK-----------TAFYFLPNAFIREFIAIVV 373
Query: 236 AYYR 239
Y R
Sbjct: 374 MYKR 377
>gi|115525420|ref|YP_782331.1| hypothetical protein RPE_3419 [Rhodopseudomonas palustris BisA53]
gi|115519367|gb|ABJ07351.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisA53]
Length = 267
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 20/190 (10%)
Query: 60 PQWKKDGNI---IVLLGNGTTIIPTIPAIR--IEPSFQSYSRIFETMRLYKSCKQHSMHC 114
P W+ +G IV+LG +I I A R +E + S R+F + L + +
Sbjct: 70 PSWQAEGRAPDGIVVLGG--SIDSDISAARNALE-TDASAERVFAMLDLARRYP----NA 122
Query: 115 TIIISGGDPQKHG--LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
I+ +GG G AE+ V L + G+ D I LE+ S T +NA + ++
Sbjct: 123 RIVFTGGSANLIGDTAAEAPVAGQLLEQFGIAPDRIVLESGSRTTAENATMTRDLVAPKP 182
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSD-----YLNAYYSIIPLSANFYLTELAL 227
G+ +LV+SA+H+ RS F+ G +A D +++ + LSA ++A+
Sbjct: 183 GERWLLVTSAFHMPRSIGVFRAIGFEVEAYPVDWRTRGWIDLRWPFGKLSAGLARIDVAV 242
Query: 228 KEYIGILIAY 237
E++G LIAY
Sbjct: 243 HEWVG-LIAY 251
>gi|229087343|ref|ZP_04219484.1| hypothetical protein bcere0022_39130 [Bacillus cereus Rock3-44]
gi|228695980|gb|EEL48824.1| hypothetical protein bcere0022_39130 [Bacillus cereus Rock3-44]
Length = 347
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLL+ I L+V + IF ++++ F I T L + + + RP
Sbjct: 112 MLLAMISLVVDPTRFFSPHFQPIFAGVSLIMIYFFFH---ISTFLTAYFLYQFNRP---- 164
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+++ + I++LG+G +P + A SRI + + Y + TII
Sbjct: 165 --RRNQDFIIVLGSGLINDKVPPLLA----------SRINKAIDFYWKQAAVTTPPTIIF 212
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NII 177
SGG L E+ +E G+ + E +S++T+QN FS ++ +++ K I
Sbjct: 213 SGGQGPDEKLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMLFSKKIMDSLKDKYRSI 272
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ LY + G+N++ S +A +Y ++EYI I++
Sbjct: 273 FTTNNFHLFRAGLYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYIAIVV 319
>gi|304436974|ref|ZP_07396937.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304369925|gb|EFM23587.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 252
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 18/172 (10%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI----IPTIPAIRIEPSFQSY 94
G + L+ L+ +Y P +PQ G++I++LG G + + PS
Sbjct: 55 GAVSDRLMGELERTYPVPE-APQ----GDVIIMLGGGAIADVQDVDGTGMLAQSPS---- 105
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
SR+ RL+ H I++SGG +E+ + L GV D I +ET+S
Sbjct: 106 SRLLAVYRLHLRT-----HLPILLSGGQVFSDTGSEAEIARRVLRSLGVPDDMIYVETRS 160
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
L T QNA++++ +++ + ILV+SA+HL R+ L F+ GI +D+
Sbjct: 161 LTTGQNARYTAEILRREGFVHPILVTSAFHLPRAVLNFEKQGITVTPYPTDF 212
>gi|87301698|ref|ZP_01084538.1| hypothetical protein WH5701_03449 [Synechococcus sp. WH 5701]
gi|87283915|gb|EAQ75869.1| hypothetical protein WH5701_03449 [Synechococcus sp. WH 5701]
Length = 266
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 58 LSPQWKKDGNIIVLLGNG-TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT- 115
L+P G+ IV+LG G +P + + ++ R+ +RL + + + +
Sbjct: 70 LTPAPVPRGDAIVVLGGGLRAALPPRAGVEVN---EAGDRLLSGIRLLRDQRAPLLLLSG 126
Query: 116 --IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+ SGGDP AE+I + LE GV D + + Q+ T + A+ + ++
Sbjct: 127 GRVSFSGGDPAP---AEAISARSLALELGVPADRLLVSDQARTTAEEARDLRRIGQSRGW 183
Query: 174 KNIILVSSAYHLKRSQLYFQ-HFGINTKASCSDYL-------------NAYYSIIPLSAN 219
++LV+SA H+ R+ F+ G+ DYL + S+ P + +
Sbjct: 184 STVLLVTSALHMPRALASFRRQSGLQVVPVACDYLLPARDQLGRPTAGSVLLSLWPDAGS 243
Query: 220 FYLTELALKEYIGILIAYYRG 240
L+ LA+KE++G+L+ RG
Sbjct: 244 LLLSSLAIKEHLGLLVYRLRG 264
>gi|237738277|ref|ZP_04568758.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
gi|229420157|gb|EEO35204.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
Length = 252
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 10/149 (6%)
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
L L+ SY ++S + + G + VLLG G II T I P RI +T
Sbjct: 61 LYDLENSYS--IISEKNLEKGEVYVLLGGG--IITTTGEGNI-PGIMPAVRIMKTAEY-- 113
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
I ISGG P ++ +ES VY +L+ GV +DI +E S +T +NA F
Sbjct: 114 ---YKKYPKKIYISGGSPLQNQESESSVYARELISLGVNSEDIIVEENSKNTNENALFIK 170
Query: 166 SMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
++ KNIIL++SA+H+KRS F+
Sbjct: 171 QELEKNGIKNIILITSAFHMKRSMFIFEK 199
>gi|307319303|ref|ZP_07598732.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
gi|306895139|gb|EFN25896.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
Length = 262
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 19/245 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-WGIIPTILLKHLQFSYQRPLLSPQ 61
L+++ L+V +L + R +S F L F+ + + L+ L+ + RP +P+
Sbjct: 17 LAFLALVVGVLLMLGRFRRSGGTLSAFGLAVLFVTLFTTAGSYFLQILEDRFPRP--TPE 74
Query: 62 WKKDGNIIVLLGN-GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IIVL G ++ + + + Q+ R ET+RL ++ Q I++SG
Sbjct: 75 PTELACIIVLGGAFENVVMASRGGMELN---QAAERFVETLRLAQAYPQ----ARILVSG 127
Query: 121 GDPQKHGLAESIVY--NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GD G+ E + N G+ D + +S TF+NA+++ ++ + L
Sbjct: 128 GDGSLSGIYEGDAHASENFFGTFGIGSDRLIRAGESRTTFENARYTRDLLAKNGLERCAL 187
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
V+SAYH+ RS F+ G+ +DY + + S N L A KE+ G
Sbjct: 188 VTSAYHMPRSIGLFRANGMEVTPWPTDYRTSGKVRLGFDFTQPSLNAQLATTAAKEWTG- 246
Query: 234 LIAYY 238
L+AYY
Sbjct: 247 LVAYY 251
>gi|254282506|ref|ZP_04957474.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
gi|219678709|gb|EED35058.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
Length = 253
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 36/221 (16%)
Query: 32 LFSFIGWGII--------PTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
L+SF+ + ++ L++ L+ Y P +P+ +IV+LG
Sbjct: 39 LWSFLAFALVYFCSTEFGANTLMEPLEARY--PAFAPEELPKAEVIVVLGG--------- 87
Query: 84 AIRIEPSF-------QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
AI E F + R+ LY M +++SGG P E+ +
Sbjct: 88 AIDGESRFGRGGDATHAADRLLTAAELYA----RKMAPYMLLSGGAPSGQ-RPEADLMAE 142
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
KL GV R + LE S TF NA S+ M+ ++I+LV+S H++R+ F+ FG
Sbjct: 143 KLEFMGVPRSAMLLEPASRTTFDNAVNSADMLNARNYRHILLVTSGAHMRRAVALFEAFG 202
Query: 197 INTKASCSDYLNAYYSI-----IPLSANFYLTELALKEYIG 232
+ A +D+ Y+ +P + + A+ E++G
Sbjct: 203 LQVTAVATDHQIPRYAPTVPGWLPTADRLARSTRAVHEWVG 243
>gi|315659320|ref|ZP_07912184.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
gi|315495745|gb|EFU84076.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
Length = 317
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
FS I + T L +L FS ++ DG I++LG G P +
Sbjct: 117 FSLIAISTLTTFAL-YLCFSSAFGRMTNHCTFDG--IIVLGAGIFTEAVTPLLA------ 167
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
SR+ + +Y Q S HCTII+SGG + ++E++ LL GV I +E
Sbjct: 168 --SRLNRALSIYN---QQS-HCTIIVSGGQGKDEPISEALAMKRYLLSHGVPEQSIIMEA 221
Query: 153 QSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINTKA 201
S +T +N +S S+I M K +++V+S +H+ R+ + Q FG+ +
Sbjct: 222 HSTNTAENFLYSKSIIDAMTPKPNKLLVVTSQFHILRALRFAQKFGLPVQG 272
>gi|289550052|ref|YP_003470956.1| membrane protein [Staphylococcus lugdunensis HKU09-01]
gi|289179584|gb|ADC86829.1| membrane protein [Staphylococcus lugdunensis HKU09-01]
Length = 317
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
FS I + T L +L FS ++ DG I++LG G P +
Sbjct: 117 FSLIAISTLTTFAL-YLCFSSAFGRMTNHCTFDG--IIVLGAGIFTEAVTPLLA------ 167
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
SR+ + +Y Q S HCTII+SGG + ++E++ LL GV I +E
Sbjct: 168 --SRLNRALSIYN---QQS-HCTIIVSGGQGKDEPISEALAMKRYLLSHGVPEQSIIMEA 221
Query: 153 QSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINTKA 201
S +T +N +S S+I M K +++V+S +H+ R+ + Q FG+ +
Sbjct: 222 HSTNTAENFLYSKSIIDAMTPKPNKLLVVTSQFHILRALRFAQKFGLPVQG 272
>gi|298695620|gb|ADI98842.1| probable membrane protein [Staphylococcus aureus subsp. aureus
ED133]
Length = 322
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 99/218 (45%), Gaps = 40/218 (18%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPT 81
F + C LL +FI + ++ T+ +H + K+ +II++LG G T +
Sbjct: 117 FAILCLSLLLTFICY-LVWTVSYRH-----------RSYNKEVDIIIVLGAGIFTEFVTP 164
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ A R++ + Y +Q + II+SGG + E++ L+
Sbjct: 165 MLAARLDRALDIY-------------QQQASATKIIVSGGQGPDEPIPEALAMQRYLIAH 211
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV++ DI +E+ S++T+ N +S +I N+ + I+ V+S +H+ R+ Q G++
Sbjct: 212 GVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSI 271
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S + + + +K+Y+G++ Y
Sbjct: 272 DGVGSH-----------TPYHFFLHVLIKDYLGVMYQY 298
>gi|254931387|ref|ZP_05264746.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|293582938|gb|EFF94970.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|328475355|gb|EGF46128.1| hypothetical protein LM220_00285 [Listeria monocytogenes 220]
gi|332311412|gb|EGJ24507.1| Integral membrane protein [Listeria monocytogenes str. Scott A]
Length = 344
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIII 118
P++ +D +++LG+G I R+ P S R+ ++ Y K + T I+
Sbjct: 159 PRYNQD--FLIVLGSGL-----IGGDRVPPLLAS--RLNRAIKFYDKQYAKKGKRATFIV 209
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNII 177
SGG ++E+ LLE G++ + I +E QS++T QN +FS + M M N +
Sbjct: 210 SGGQGANETISEAEAMRGYLLEKGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSL 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 270 FSTNNFHLFRAGIYARKAGLKSQGIGAK-----------TALYYMPNALIREFIAITVMY 318
Query: 238 YR 239
+
Sbjct: 319 KK 320
>gi|17546687|ref|NP_520089.1| hypothetical protein RSc1968 [Ralstonia solanacearum GMI1000]
gi|17428986|emb|CAD15670.1| probable transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 265
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
++ +GG P+ +G+ E+ + + + G +D +ET+S T +NA FS+ M++ +
Sbjct: 132 VLATGGAPEGNGVPEAELMRRLVADMG--QDARWIETRSATTEENAAFSAPMLRAAGIRR 189
Query: 176 IILVSSAYHLKRSQLYFQHFGIN-TKASCS-------DYLNAYYSIIPLSANFYLTELAL 227
I LV+ +H+ R++ YF+ G T A C S++P + LT AL
Sbjct: 190 IYLVTHYWHMARARRYFEGQGFTVTPAPCGWGGEVEESPAGGILSLLPRTDGLMLTRFAL 249
Query: 228 KEYIGIL 234
+E +G L
Sbjct: 250 REALGQL 256
>gi|300865598|ref|ZP_07110374.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300336399|emb|CBN55524.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 236
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 99/220 (45%), Gaps = 29/220 (13%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
G I L++ L+ P PQ + IV+LG G I P +P ++ RI
Sbjct: 26 GWIAQNLVRSLETQNLPPTPIPQTRA----IVVLGGG--IKPALPPRPWVEVGEAGDRIL 79
Query: 99 ETMRLYKSCKQHSMHCTIIISGG--DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+LY+ K +I+SGG + + G ES GV I + SL+
Sbjct: 80 YGSQLYRQGK----APWLILSGGRVEWKGGGPPESADMAEIAQAMGVPTSAILQDPTSLN 135
Query: 157 TFQNAQFSSSMIK--NMQGKNIILVSSAYHLKRSQLYFQHFGINT--------------K 200
T+QNA ++K N+ G I+LV+SA H+ RS L FQ GI T +
Sbjct: 136 TYQNAVNVRKILKDNNILGP-ILLVTSALHMPRSLLIFQRQGIETIPAPTDFSITQQDME 194
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
AS S + +++P + N + ALKEYIG+ + RG
Sbjct: 195 ASQSSFQAVLLNLLPDAYNLQQSTKALKEYIGLAVYRLRG 234
>gi|228936112|ref|ZP_04098918.1| hypothetical protein bthur0009_45540 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228823567|gb|EEM69393.1| hypothetical protein bthur0009_45540 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 302
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 35/240 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L S +FL +S ++ IF + L+ FI + L + + + RP
Sbjct: 65 ILFSILFLFISPASFFSPHLQPIFGGISLITLYFFIH---LSNFLSAYFLYQFNRP---- 117
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+++ + I++LG+G +P + A SRI + + Y + TII
Sbjct: 118 --RRNQDFIIVLGSGLINDKVPPLLA----------SRIHKAIDFYWKQAAVNTPPTIIF 165
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK-N 175
SGG GL E+ +E G+ + E +S++T+QN FS ++ ++ +GK
Sbjct: 166 SGGQGPDEGLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYR 225
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 226 SIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAIVV 274
>gi|228993553|ref|ZP_04153461.1| hypothetical protein bpmyx0001_42800 [Bacillus pseudomycoides DSM
12442]
gi|228766144|gb|EEM14790.1| hypothetical protein bpmyx0001_42800 [Bacillus pseudomycoides DSM
12442]
Length = 342
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLL + LIV + IF F++++ F I T L + + + RP
Sbjct: 107 MLLIMLSLIVDPTRFFSPHFQPIFTGIFFIMVYFFFH---ISTFLTAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+++ + I++LG+G +P + A SRI + + Y + TII
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLLA----------SRINKAIDFYHKQAAVASPPTIIF 207
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NII 177
SGG L E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 208 SGGQGPDENLPEAEAMQKYAIEKGIPIEHTVQENRSVNTYQNMLFSKQIMDSLKDRYKSI 267
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ LY + G+N++ S +A +Y ++EYI I++
Sbjct: 268 FTTNNFHLFRAGLYAKQAGLNSQGIGSK-----------TAFYYWPNAMIREYIAIVV 314
>gi|152992958|ref|YP_001358679.1| hypothetical protein SUN_1369 [Sulfurovum sp. NBC37-1]
gi|151424819|dbj|BAF72322.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 251
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 27/205 (13%)
Query: 3 LSWIFLIVSYWHLLCQSIRK----IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L F +++ + L Q +R+ ++ ++ LFS+ + ILL ++ +Y
Sbjct: 18 LGVFFFLMAIFFLSRQKVRRAKSFLYVGIIWLFLFSYAPFA---NILLHPIESAYSALQH 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+P K+ I +LGNG T T+P I + + ++ R+ E +RLY+ Q + TII+
Sbjct: 75 AP---KNTRYIYVLGNGHTTDRTLP-ITSQLASEAIVRLNEGIRLYR---QLEGNATIIL 127
Query: 119 SG----GDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
SG DP H + KL + G++ D+ L T + DT + AQ + + K+
Sbjct: 128 SGYEGLHDPTPHAFMQ-----EKLATALGIDPKDLILRTTAKDTEEEAQAARQIAKD--- 179
Query: 174 KNIILVSSAYHLKRSQLYFQHFGIN 198
+ +ILV+SAYH+ R+ +F+ G++
Sbjct: 180 QPLILVTSAYHMPRAMGWFEKEGLH 204
>gi|299066425|emb|CBJ37610.1| conserved exported protein of unknown function [Ralstonia
solanacearum CMR15]
Length = 265
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 10/125 (8%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
++ +GG P+ +G+ E+ + + + G +D +ET+S T +NA FS+ M++ +
Sbjct: 132 VLATGGAPEGNGVPEAELMRRLVADMG--QDARWIETRSATTEENAAFSAPMLRAAGIRR 189
Query: 176 IILVSSAYHLKRSQLYFQHFGIN-TKASCS-------DYLNAYYSIIPLSANFYLTELAL 227
I LV+ +H+ R++ YF+ G T A C S++P + LT AL
Sbjct: 190 IYLVTHYWHMARARRYFEGQGFTVTPAPCGWGGEVEESPAGGILSLLPRTDGLMLTRFAL 249
Query: 228 KEYIG 232
+E +G
Sbjct: 250 REALG 254
>gi|154248380|ref|YP_001419338.1| hypothetical protein Xaut_4460 [Xanthobacter autotrophicus Py2]
gi|154162465|gb|ABS69681.1| protein of unknown function DUF218 [Xanthobacter autotrophicus Py2]
Length = 267
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 25/194 (12%)
Query: 60 PQWKKDGNI---IVLLGNGTTIIPTIPAIRIEPSF-QSYSRIFETMRLYKSCKQHSMH-- 113
PQ+K DG I++LG P I +R PSF ++ R L + Q +
Sbjct: 72 PQFKDDGTPVTGIIMLGGSEK--PEIGNVRGLPSFGEAGERPIAFAALSRRYPQARLAFV 129
Query: 114 --CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
++ GD E+ + L + G+ ++ E +S +T +NA+F+ +++K
Sbjct: 130 GGSGLLFPNGD-----AVEAQMIRMSLPDLGIPEARVEFEGKSRNTAENAEFAKALLKPK 184
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFG-------INTKASCSDYLNAYYSIIPLSANFYLTE 224
G+ +LV+SA+H+ R+ F+ G ++ + + D L+ +S + T+
Sbjct: 185 PGERWLLVTSAWHMPRAVGCFRKVGFDVVPYPVDFQTAAPDRLDQPFSRA--ADGLDKTD 242
Query: 225 LALKEYIGILIAYY 238
+A +E+IG L+AYY
Sbjct: 243 VATREWIG-LVAYY 255
>gi|291246382|ref|YP_003505768.1| protein of unknown function DUF218 [Staphylococcus simulans bv.
staphylolyticus]
gi|290463913|gb|ADD24900.1| protein of unknown function DUF218 [Staphylococcus simulans bv.
staphylolyticus]
Length = 304
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 22/149 (14%)
Query: 61 QWKK-DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
WK+ D IV+LG+G P ++ SRI + + +Y+ K+ C +I+S
Sbjct: 129 NWKRRDLKYIVVLGSGLRGDQVTPLLK--------SRIDKAINIYRGQKK----CKMIMS 176
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NII 177
GG + + ES+ N + SGV ++DI ETQS +T +N Q S ++ M GK I
Sbjct: 177 GGQGEDELIPESVAMLNYAVNSGVSKEDIITETQSKNTRENIQLSYNL---MMGKPERIA 233
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+V++ YHL R+ L + K C Y
Sbjct: 234 IVTNYYHLFRALLIAKE----NKIKCIGY 258
>gi|283471580|emb|CAQ50791.1| membrane protein [Staphylococcus aureus subsp. aureus ST398]
Length = 322
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 28/180 (15%)
Query: 62 WKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ K+ +II++LG G T + + A R++ + Y +Q + II+S
Sbjct: 143 YTKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIY-------------QQQASATKIIVS 189
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNII 177
GG ++E++ L+ GV++ DI +E+ S++T+ N +S +I N+ + I+
Sbjct: 190 GGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIV 249
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V+S +H+ R+ Q G++ S + + + +K+Y+G++ Y
Sbjct: 250 CVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQY 298
>gi|116329099|ref|YP_798819.1| hypothetical protein LBL_2520 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330291|ref|YP_800009.1| hypothetical protein LBJ_0560 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116121843|gb|ABJ79886.1| conserved hypothetical protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116123980|gb|ABJ75251.1| conserved hypothetical protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 273
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 15/156 (9%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK--HGLAESIVYNNKLLESGVERDDIKL 150
S R+ ET+RLY++ K I+ SGG + ES L + G+ + L
Sbjct: 105 SAERLTETVRLYRAKKAPK----ILFSGGSGNLLYQTVPESEPAGRFLKQMGIPDSSLIL 160
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E++S +T +N F+ ++K ++ILV+S++H+KRS FQ GI +D+
Sbjct: 161 ESKSRNTVENKNFAVELLKKHGWSSVILVTSSFHMKRSVEIFQEKGITIIPFPTDF-RTQ 219
Query: 211 YSIIPLSANFYL-------TELALKEYIGILIAYYR 239
S++ L NF+ + +++KE+IGIL+ R
Sbjct: 220 KSVLTLD-NFFPSTGCLENSTISIKEWIGILVHKIR 254
>gi|258442759|ref|ZP_05691319.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|282893804|ref|ZP_06302036.1| hypothetical protein SGAG_01156 [Staphylococcus aureus A8117]
gi|257851880|gb|EEV75814.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|282763862|gb|EFC03990.1| hypothetical protein SGAG_01156 [Staphylococcus aureus A8117]
Length = 322
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 28/180 (15%)
Query: 62 WKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ K+ +II++LG G T + + A R++ + Y +Q + II+S
Sbjct: 143 YNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIY-------------QQQASATKIIVS 189
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNII 177
GG ++E++ L+ GV++ DI +E+ S++T+ N +S +I N+ + I+
Sbjct: 190 GGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIV 249
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V+S +H+ R+ Q G++ S + + + +K+Y+G++ Y
Sbjct: 250 CVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQY 298
>gi|170749150|ref|YP_001755410.1| hypothetical protein Mrad2831_2743 [Methylobacterium radiotolerans
JCM 2831]
gi|170655672|gb|ACB24727.1| protein of unknown function DUF218 [Methylobacterium radiotolerans
JCM 2831]
Length = 281
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
G+AE+ + + + GV R + LE +S +T +NA FS++++K G+ +LV+SA+H+
Sbjct: 137 GMAEADIVSRQADVIGVPRTRLILENRSRNTHENAAFSAALVKPKPGERWLLVTSAWHMP 196
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIP-----LSANFYLTELALKEYIGILIAY 237
R+ F+ G A DY +S + S +LA+KE+IG L+AY
Sbjct: 197 RAVGCFRQAGFAVDAFPVDYRTRGWSDVAHFHGFASDGLLQFDLAVKEWIG-LVAY 251
>gi|253734225|ref|ZP_04868390.1| membrane protein [Staphylococcus aureus subsp. aureus TCH130]
gi|253727920|gb|EES96649.1| membrane protein [Staphylococcus aureus subsp. aureus TCH130]
Length = 322
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 28/180 (15%)
Query: 62 WKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ K+ +II++LG G T + + A R++ + Y +Q + II+S
Sbjct: 143 YNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIY-------------QQQASATKIIVS 189
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNII 177
GG ++E++ L+ GV++ DI +E+ S++T+ N +S +I N+ + I+
Sbjct: 190 GGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIV 249
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V+S +H+ R+ Q G++ S + + + +K+Y+G++ Y
Sbjct: 250 CVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQY 298
>gi|15925348|ref|NP_372882.1| hypothetical protein SAV2358 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927938|ref|NP_375471.1| hypothetical protein SA2148 [Staphylococcus aureus subsp. aureus
N315]
gi|21284008|ref|NP_647096.1| hypothetical protein MW2279 [Staphylococcus aureus subsp. aureus
MW2]
gi|49487141|ref|YP_044362.1| hypothetical protein SAS2249 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650902|ref|YP_187160.1| hypothetical protein SACOL2354 [Staphylococcus aureus subsp. aureus
COL]
gi|87162083|ref|YP_494939.1| hypothetical protein SAUSA300_2304 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88196279|ref|YP_501100.1| hypothetical protein SAOUHSC_02638 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268795|ref|YP_001247738.1| hypothetical protein SaurJH9_2382 [Staphylococcus aureus subsp.
aureus JH9]
gi|150394865|ref|YP_001317540.1| hypothetical protein SaurJH1_2428 [Staphylococcus aureus subsp.
aureus JH1]
gi|151222471|ref|YP_001333293.1| hypothetical protein NWMN_2259 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156980673|ref|YP_001442932.1| hypothetical protein SAHV_2342 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161510552|ref|YP_001576211.1| hypothetical protein USA300HOU_2340 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221141291|ref|ZP_03565784.1| hypothetical protein SauraJ_06573 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253314698|ref|ZP_04837911.1| hypothetical protein SauraC_00695 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255007134|ref|ZP_05145735.2| hypothetical protein SauraM_11715 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257794700|ref|ZP_05643679.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|258407380|ref|ZP_05680523.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258422292|ref|ZP_05685204.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|258439684|ref|ZP_05690430.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258446541|ref|ZP_05694696.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|258450342|ref|ZP_05698434.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|258452631|ref|ZP_05700635.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|262049818|ref|ZP_06022682.1| hypothetical protein SAD30_0164 [Staphylococcus aureus D30]
gi|262052093|ref|ZP_06024302.1| hypothetical protein SA930_1560 [Staphylococcus aureus 930918-3]
gi|269203990|ref|YP_003283259.1| hypothetical protein SAAV_2423 [Staphylococcus aureus subsp. aureus
ED98]
gi|282925248|ref|ZP_06332907.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|282926912|ref|ZP_06334539.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|284025381|ref|ZP_06379779.1| hypothetical protein Saura13_12367 [Staphylococcus aureus subsp.
aureus 132]
gi|294848900|ref|ZP_06789645.1| hypothetical protein SKAG_00971 [Staphylococcus aureus A9754]
gi|295405045|ref|ZP_06814858.1| hypothetical protein SMAG_00190 [Staphylococcus aureus A8819]
gi|296275444|ref|ZP_06857951.1| hypothetical protein SauraMR_03830 [Staphylococcus aureus subsp.
aureus MR1]
gi|297209823|ref|ZP_06926219.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297244102|ref|ZP_06927992.1| hypothetical protein SLAG_00189 [Staphylococcus aureus A8796]
gi|300910835|ref|ZP_07128285.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|304379551|ref|ZP_07362285.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|13702309|dbj|BAB43450.1| SA2148 [Staphylococcus aureus subsp. aureus N315]
gi|14248132|dbj|BAB58520.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50]
gi|21205451|dbj|BAB96144.1| MW2279 [Staphylococcus aureus subsp. aureus MW2]
gi|49245584|emb|CAG44062.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285088|gb|AAW37182.1| membrane protein, putative [Staphylococcus aureus subsp. aureus
COL]
gi|87128057|gb|ABD22571.1| putative membrane protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203837|gb|ABD31647.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741864|gb|ABQ50162.1| protein of unknown function DUF218 [Staphylococcus aureus subsp.
aureus JH9]
gi|149947317|gb|ABR53253.1| protein of unknown function DUF218 [Staphylococcus aureus subsp.
aureus JH1]
gi|150375271|dbj|BAF68531.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156722808|dbj|BAF79225.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|160369361|gb|ABX30332.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257788672|gb|EEV27012.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257840892|gb|EEV65343.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257841723|gb|EEV66160.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257847460|gb|EEV71462.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257854609|gb|EEV77557.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|257856434|gb|EEV79343.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|257859703|gb|EEV82547.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|259159994|gb|EEW45029.1| hypothetical protein SA930_1560 [Staphylococcus aureus 930918-3]
gi|259162125|gb|EEW46703.1| hypothetical protein SAD30_0164 [Staphylococcus aureus D30]
gi|262076280|gb|ACY12253.1| hypothetical protein SAAV_2423 [Staphylococcus aureus subsp. aureus
ED98]
gi|269941943|emb|CBI50354.1| putative membrane protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282591363|gb|EFB96436.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|282592649|gb|EFB97658.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|285818021|gb|ADC38508.1| Integral membrane protein [Staphylococcus aureus 04-02981]
gi|294824279|gb|EFG40703.1| hypothetical protein SKAG_00971 [Staphylococcus aureus A9754]
gi|294969990|gb|EFG46008.1| hypothetical protein SMAG_00190 [Staphylococcus aureus A8819]
gi|296885496|gb|EFH24433.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297178880|gb|EFH38125.1| hypothetical protein SLAG_00189 [Staphylococcus aureus A8796]
gi|300887815|gb|EFK83010.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|302752229|gb|ADL66406.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304341896|gb|EFM07801.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312830705|emb|CBX35547.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315128719|gb|EFT84720.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|315198096|gb|EFU28427.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|329315045|gb|AEB89458.1| Membrane protein, putative [Staphylococcus aureus subsp. aureus
T0131]
gi|329723592|gb|EGG60121.1| putative membrane protein [Staphylococcus aureus subsp. aureus
21172]
gi|329726055|gb|EGG62528.1| putative membrane protein [Staphylococcus aureus subsp. aureus
21189]
gi|329730403|gb|EGG66793.1| putative membrane protein [Staphylococcus aureus subsp. aureus
21193]
Length = 322
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 28/180 (15%)
Query: 62 WKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ K+ +II++LG G T + + A R++ + Y +Q + II+S
Sbjct: 143 YNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIY-------------QQQASATKIIVS 189
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNII 177
GG ++E++ L+ GV++ DI +E+ S++T+ N +S +I N+ + I+
Sbjct: 190 GGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIV 249
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V+S +H+ R+ Q G++ S + + + +K+Y+G++ Y
Sbjct: 250 CVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQY 298
>gi|46907236|ref|YP_013625.1| hypothetical protein LMOf2365_1025 [Listeria monocytogenes serotype
4b str. F2365]
gi|47094138|ref|ZP_00231859.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858]
gi|226223622|ref|YP_002757729.1| hypothetical protein Lm4b_01024 [Listeria monocytogenes Clip81459]
gi|254823724|ref|ZP_05228725.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|254827949|ref|ZP_05232636.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|254994315|ref|ZP_05276505.1| hypothetical protein LmonocytoFSL_16035 [Listeria monocytogenes FSL
J2-064]
gi|255521903|ref|ZP_05389140.1| hypothetical protein LmonocFSL_11877 [Listeria monocytogenes FSL
J1-175]
gi|46880503|gb|AAT03802.1| putative membrane protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|47017485|gb|EAL08297.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858]
gi|225876084|emb|CAS04790.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258600331|gb|EEW13656.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|293592945|gb|EFG00706.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
Length = 344
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIII 118
P++ +D +++LG+G I R+ P S R+ ++ Y K + T I+
Sbjct: 159 PRYNQD--FLIVLGSGL-----IGGDRVPPLLAS--RLNRAIKFYDKQYAKKGKRATFIV 209
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNII 177
SGG ++E+ L+E G++ + I +E QS++T QN +FS + M M N +
Sbjct: 210 SGGQGANETISEAEAMRGYLIEKGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSL 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 270 FSTNNFHLFRAGIYARKAGLKSQGIGAK-----------TALYYMPNALIREFIAITVMY 318
Query: 238 YR 239
+
Sbjct: 319 KK 320
>gi|258512251|ref|YP_003185685.1| hypothetical protein Aaci_2287 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478977|gb|ACV59296.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 259
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 18/192 (9%)
Query: 59 SPQWKKDGNIIVLLGNG-TTIIPTI--PAIRIEPSF-QSYSRIFETMRLYKSCKQHSMHC 114
+P + G+ IV+LG G + P PA+ + S R+ LY+ +H
Sbjct: 68 APPARPTGDAIVVLGAGFSAATPDFADPALDTGTLYGDSGERVLAAAALYRR-----LHL 122
Query: 115 TIIISGGD---PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
I++SGG A +++ L GV + D+ ++ S T +NA+ ++ M++ +
Sbjct: 123 PIVLSGGPLIRANGKSYAFALIAARDLAALGVPQRDLYVDATSRTTEENAEHTAVMLRRL 182
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTEL 225
ILV+SA + R+ + F+ G+ + Y+ + Y+ +P A T
Sbjct: 183 HRSRPILVASAAQMARAVIDFRRVGVKVEPYPVGYVASSVCTPLAYAWLPSQAGLDETCT 242
Query: 226 ALKEYIGILIAY 237
AL E +GIL A+
Sbjct: 243 ALHEDLGILAAH 254
>gi|188590697|ref|YP_001920933.1| integral membrane protein [Clostridium botulinum E3 str. Alaska
E43]
gi|188500978|gb|ACD54114.1| integral membrane protein [Clostridium botulinum E3 str. Alaska
E43]
Length = 357
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 23/182 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P+ +D I++LG+G + R+ P S RI + + Y Q + II S
Sbjct: 170 PKLNQD--FIIVLGSG------LIGDRVPPLLAS--RIDKAIEFYNKQSQVTNPPKIIFS 219
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNII 177
GG ++E+ + G+ +D +E S+ T +N +FS ++++N+ +G I
Sbjct: 220 GGQGPDEKVSEAFAMQKYAVNKGITIEDTIIEDNSVSTLENMKFSKNIMENLMPEGYRSI 279
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ YHL R+ +Y + GI ++ S +A ++L ++EYI I++ Y
Sbjct: 280 FTTNNYHLFRAGIYARLAGIKSQGVGSK-----------TALYFLPNAMIREYIAIVVMY 328
Query: 238 YR 239
+
Sbjct: 329 KK 330
>gi|300703732|ref|YP_003745334.1| hypothetical protein RCFBP_11417 [Ralstonia solanacearum CFBP2957]
gi|299071395|emb|CBJ42714.1| conserved exported protein of unknown function [Ralstonia
solanacearum CFBP2957]
Length = 265
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 10/127 (7%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
++ +GG PQ G+ E+ + + + G +D +ET+S T +NA FS+ M++ +
Sbjct: 132 VLATGGAPQGLGVPEAELMGRLVADLG--QDARWIETRSATTEENAAFSAPMLRAAGIQR 189
Query: 176 IILVSSAYHLKRSQLYFQHFG-INTKASCS-------DYLNAYYSIIPLSANFYLTELAL 227
I LV+ +H+ R++ YF+ G I T A C + S++P + LT AL
Sbjct: 190 IYLVTHYWHMARARRYFEGQGLIVTPAPCGWGGEVGESPVGGILSLLPRTDGLALTRSAL 249
Query: 228 KEYIGIL 234
+E +G L
Sbjct: 250 REALGQL 256
>gi|257876627|ref|ZP_05656280.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
gi|257810793|gb|EEV39613.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
Length = 356
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 36/232 (15%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
H IR +F + LL+ F+ + L L S P++ +D I++LG
Sbjct: 131 HFFPDWIRTLFGIVPLSLLYLFV-------VFLNFLSISVIYQFNHPRYNQD--FIIVLG 181
Query: 74 ----NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
NGTT+ P + A RI + Y F K +++SGG L
Sbjct: 182 AGLLNGTTVSPLL-AKRINTAISFYESQF---------KAKKTAPRLLMSGGQGSDEQLP 231
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKR 187
E++ + + GV +I +ET S T++N +FS ++ +++ G I S+ YH+ R
Sbjct: 232 EAVAMKDYAIAQGVPEGEILVETNSTTTYENMKFSKEIMDSLKPNGYKAIFASNNYHIFR 291
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ LY KA A+Y YL L+E++ IL + R
Sbjct: 292 AGLYADQ--AQLKADGIGAPTAFY---------YLPNAFLREFVAILFMHKR 332
>gi|224502681|ref|ZP_03670988.1| hypothetical protein LmonFR_09199 [Listeria monocytogenes FSL
R2-561]
gi|254832250|ref|ZP_05236905.1| hypothetical protein Lmon1_12929 [Listeria monocytogenes 10403S]
Length = 312
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIII 118
P++ +D +++LG+G I R+ P S R+ ++ Y K + T I+
Sbjct: 127 PRYNQD--FLIVLGSGL-----IGGDRVPPLLAS--RLNRAIKFYDKQYAKKGKRATFIV 177
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNII 177
SGG ++E+ L+E G++ + I +E QS++T QN +FS + M M N +
Sbjct: 178 SGGQGANETISEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSL 237
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 238 FSTNNFHLFRAGIYARKAGLKSQGIGAK-----------TALYYMPNALIREFIAITVMY 286
Query: 238 YR 239
+
Sbjct: 287 KK 288
>gi|16803044|ref|NP_464529.1| hypothetical protein lmo1004 [Listeria monocytogenes EGD-e]
gi|47096336|ref|ZP_00233932.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
gi|224500750|ref|ZP_03669099.1| hypothetical protein LmonF1_14176 [Listeria monocytogenes Finland
1988]
gi|254898822|ref|ZP_05258746.1| hypothetical protein LmonJ_03375 [Listeria monocytogenes J0161]
gi|254911689|ref|ZP_05261701.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254936015|ref|ZP_05267712.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|284801336|ref|YP_003413201.1| hypothetical protein LM5578_1086 [Listeria monocytogenes 08-5578]
gi|284994478|ref|YP_003416246.1| hypothetical protein LM5923_1040 [Listeria monocytogenes 08-5923]
gi|16410406|emb|CAC99082.1| lmo1004 [Listeria monocytogenes EGD-e]
gi|47015294|gb|EAL06231.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
gi|258608603|gb|EEW21211.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|284056898|gb|ADB67839.1| hypothetical protein LM5578_1086 [Listeria monocytogenes 08-5578]
gi|284059945|gb|ADB70884.1| hypothetical protein LM5923_1040 [Listeria monocytogenes 08-5923]
gi|293589638|gb|EFF97972.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 344
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIII 118
P++ +D +++LG+G I R+ P S R+ ++ Y K + T I+
Sbjct: 159 PRYNQD--FLIVLGSGL-----IGGDRVPPLLAS--RLNRAIKFYDKQYAKKGKRATFIV 209
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNII 177
SGG ++E+ L+E G++ + I +E QS++T QN +FS + M M N +
Sbjct: 210 SGGQGANETISEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSL 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 270 FSTNNFHLFRAGIYARKAGLKSQGIGAK-----------TALYYMPNALIREFIAITVMY 318
Query: 238 YR 239
+
Sbjct: 319 KK 320
>gi|307298224|ref|ZP_07578028.1| protein of unknown function DUF218 [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916310|gb|EFN46693.1| protein of unknown function DUF218 [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 252
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 27/211 (12%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGW----GIIPTILLKHLQFSYQRPLLSPQ 61
IFLI++ + R+ M++ F + G + L+ L+ +Y P
Sbjct: 21 IFLIIAVILIKKSEERRTKISGVVMIILCFFAYLLSTGFGTHLYLQPLERAYTAPN---- 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC----TII 117
G IV+L +G I P ++ + + + K +S+H II
Sbjct: 77 -NVSGQAIVVLSSGIIISPE-------------GQVLDNHSVARLSKAYSLHLQTKLPII 122
Query: 118 ISGG-DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++G P + +A S + + LL+ GV + +E + T++NA++S+ + +I
Sbjct: 123 VTGSFMPGRSTVAVSELMRDWLLDRGVASSKVIVEPMAQTTWENARYSADICSQFNWSSI 182
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
+LV+SA H+KR+ F+ FG+ +DYL
Sbjct: 183 VLVTSAVHMKRAVTSFEKFGLRVTPFPTDYL 213
>gi|323443681|gb|EGB01294.1| hypothetical protein SAO46_0340 [Staphylococcus aureus O46]
Length = 322
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 28/180 (15%)
Query: 62 WKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ K+ +II++LG G T + + A R++ + Y +Q + II+S
Sbjct: 143 YNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIY-------------QQQASATKIIVS 189
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NII 177
GG + E++ L+ GV++ DI +E+ S++T+ N +S +I N+ K I+
Sbjct: 190 GGQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHKAVKIV 249
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V+S +H+ R+ Q G++ S + + + +K+Y+G++ Y
Sbjct: 250 CVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQY 298
>gi|255026242|ref|ZP_05298228.1| hypothetical protein LmonocytFSL_07670 [Listeria monocytogenes FSL
J2-003]
Length = 284
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIII 118
P++ +D +++LG+G I R+ P S R+ ++ Y K + T I+
Sbjct: 99 PRYNQD--FLIVLGSGL-----IGGDRVPPLLAS--RLNRAIKFYDKQYAKKGKRATFIV 149
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNII 177
SGG ++E+ L+E G++ + I +E QS++T QN +FS + M M N +
Sbjct: 150 SGGQGANETISEAEAMRGYLIEKGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSL 209
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 210 FSTNNFHLFRAGIYARKAGLKSQGIGAK-----------TALYYMPNALIREFIAITVMY 258
Query: 238 YR 239
+
Sbjct: 259 KK 260
>gi|82751953|ref|YP_417694.1| hypothetical protein SAB2237 [Staphylococcus aureus RF122]
gi|258425099|ref|ZP_05687970.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|82657484|emb|CAI81926.1| probable membrane protein [Staphylococcus aureus RF122]
gi|257844933|gb|EEV68976.1| conserved hypothetical protein [Staphylococcus aureus A9635]
Length = 322
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 28/180 (15%)
Query: 62 WKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ K+ +II++LG G T + + A R++ + Y +Q + II+S
Sbjct: 143 YNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIY-------------QQQASATKIIVS 189
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNII 177
GG + E++ L+ GV++ DI +E+ S++T+ N +S +I N+ + I+
Sbjct: 190 GGQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIV 249
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V+S +H+ R+ Q G++ S + + + +K+Y+G++ Y
Sbjct: 250 CVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQY 298
>gi|312114877|ref|YP_004012473.1| hypothetical protein Rvan_2149 [Rhodomicrobium vannielii ATCC
17100]
gi|311220006|gb|ADP71374.1| protein of unknown function DUF218 [Rhodomicrobium vannielii ATCC
17100]
Length = 276
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 17/185 (9%)
Query: 67 NIIVLLGNGTTIIPTIP-AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-- 123
IIVL G + IPT AI + PS + R+ ET+RL +H +I SGG
Sbjct: 80 GIIVLGGGVSGAIPTEGGAIPLGPSVE---RVTETLRL---ALRHP-DLPVIFSGGSGLI 132
Query: 124 -QKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
Q + E G+ ++LE +S +T +NA S++M++ + ILV+S
Sbjct: 133 LQLSDAPNEADAARRFFEGFGIVAPRLRLEDRSRNTLENATLSAAMLQPKPDQRWILVTS 192
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSII--PL---SANFYLTELALKEYIGILIA 236
A+H++R+ F+ G YL + + P S + ++A KE++GI ++
Sbjct: 193 AFHMRRAAALFEAQGFRVVPWPVGYLTSGTGDLRQPFGRASEGLHRIDIATKEWLGIFVS 252
Query: 237 YYRGN 241
+ G+
Sbjct: 253 WANGD 257
>gi|49484573|ref|YP_041797.1| hypothetical protein SAR2444 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257423840|ref|ZP_05600269.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257426523|ref|ZP_05602925.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429159|ref|ZP_05605546.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257431805|ref|ZP_05608168.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257434765|ref|ZP_05610816.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282902270|ref|ZP_06310163.1| putative membrane protein [Staphylococcus aureus subsp. aureus
C160]
gi|282906699|ref|ZP_06314547.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282909675|ref|ZP_06317484.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911921|ref|ZP_06319717.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282915217|ref|ZP_06322994.1| putative membrane protein [Staphylococcus aureus subsp. aureus
M899]
gi|282920941|ref|ZP_06328659.1| hypothetical protein SASG_01122 [Staphylococcus aureus subsp.
aureus C427]
gi|282925847|ref|ZP_06333495.1| hypothetical protein SARG_01174 [Staphylococcus aureus subsp.
aureus C101]
gi|283959139|ref|ZP_06376580.1| putative membrane protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293497613|ref|ZP_06665467.1| hypothetical protein SCAG_00186 [Staphylococcus aureus subsp.
aureus 58-424]
gi|293511192|ref|ZP_06669888.1| membrane protein [Staphylococcus aureus subsp. aureus M809]
gi|293549800|ref|ZP_06672472.1| putative membrane protein [Staphylococcus aureus subsp. aureus
M1015]
gi|295428939|ref|ZP_06821563.1| hypothetical protein SIAG_02182 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297589565|ref|ZP_06948206.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MN8]
gi|49242702|emb|CAG41426.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257272858|gb|EEV04960.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257276154|gb|EEV07605.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279640|gb|EEV10227.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257282684|gb|EEV12816.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257285361|gb|EEV15477.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282312676|gb|EFB43080.1| hypothetical protein SARG_01174 [Staphylococcus aureus subsp.
aureus C101]
gi|282315356|gb|EFB45740.1| hypothetical protein SASG_01122 [Staphylococcus aureus subsp.
aureus C427]
gi|282320938|gb|EFB51272.1| putative membrane protein [Staphylococcus aureus subsp. aureus
M899]
gi|282323617|gb|EFB53933.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282326249|gb|EFB56553.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282329598|gb|EFB59119.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596729|gb|EFC01688.1| putative membrane protein [Staphylococcus aureus subsp. aureus
C160]
gi|283788731|gb|EFC27558.1| putative membrane protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290918847|gb|EFD95923.1| putative membrane protein [Staphylococcus aureus subsp. aureus
M1015]
gi|291096544|gb|EFE26802.1| hypothetical protein SCAG_00186 [Staphylococcus aureus subsp.
aureus 58-424]
gi|291465818|gb|EFF08348.1| membrane protein [Staphylococcus aureus subsp. aureus M809]
gi|295127288|gb|EFG56930.1| hypothetical protein SIAG_02182 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297578076|gb|EFH96789.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MN8]
gi|312437225|gb|ADQ76296.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH60]
gi|315193624|gb|EFU24020.1| hypothetical protein CGSSa00_14298 [Staphylococcus aureus subsp.
aureus CGS00]
Length = 322
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 28/180 (15%)
Query: 62 WKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ K+ +II++LG G T + + A R++ + Y +Q + II+S
Sbjct: 143 YNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIY-------------QQQASATKIIVS 189
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNII 177
GG + E++ L+ GV++ DI +E+ S++T+ N +S +I N+ + I+
Sbjct: 190 GGQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIV 249
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V+S +H+ R+ Q G++ S + + + +K+Y+G++ Y
Sbjct: 250 CVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQY 298
>gi|282917710|ref|ZP_06325461.1| hypothetical protein SATG_02569 [Staphylococcus aureus subsp.
aureus D139]
gi|283767447|ref|ZP_06340362.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
H19]
gi|282318465|gb|EFB48824.1| hypothetical protein SATG_02569 [Staphylococcus aureus subsp.
aureus D139]
gi|283461326|gb|EFC08410.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
H19]
Length = 322
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 28/180 (15%)
Query: 62 WKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ K+ +II++LG G T + + A R++ + Y +Q + II+S
Sbjct: 143 YNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIY-------------QQQASATKIIVS 189
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNII 177
GG + E++ L+ GV++ DI +E+ S++T+ N +S +I N+ + I+
Sbjct: 190 GGQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIV 249
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V+S +H+ R+ Q G++ S + + + +K+Y+G++ Y
Sbjct: 250 CVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQY 298
>gi|312866618|ref|ZP_07726833.1| putative membrane protein [Streptococcus parasanguinis F0405]
gi|311097917|gb|EFQ56146.1| putative membrane protein [Streptococcus parasanguinis F0405]
Length = 342
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 27/180 (15%)
Query: 63 KKDGNIIVLLGNGTT--IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+K+ + I++LG+G +P + A R+E Y +Q +I+SG
Sbjct: 157 RKEPDAIIILGSGLIGDKVPPLLAQRLEKGKAIY-------------EQFERRPKLIVSG 203
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILV 179
G +AE+ L+E GV D I +E +S TF+N FS +++ GK +++V
Sbjct: 204 GQGSDELIAEAEAMAGYLIEHGVPEDAILIENRSRTTFENLTFSKRILEEEGLGKRVLVV 263
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++++H R+ ++ + I ++ S +A +YL ++E +G++ Y++
Sbjct: 264 TNSFHALRAGVFMRRLKIPGRSIGSK-----------TAFYYLPSAWIRETVGLVSLYWK 312
>gi|86749502|ref|YP_485998.1| hypothetical protein RPB_2382 [Rhodopseudomonas palustris HaA2]
gi|86572530|gb|ABD07087.1| Protein of unknown function DUF218 [Rhodopseudomonas palustris
HaA2]
Length = 264
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 60 PQWKKDG----NIIVLLGNGTTIIPTIPAIRIEPSFQSYS-RIFETMRLYKSCKQHSMHC 114
P W+ G IIVL G I + A R S + R+ + L + Q
Sbjct: 70 PPWQFSGRAPDGIIVL---GGAIDSEVSAARDAVELDSSAERVMAALELARDYPQ----A 122
Query: 115 TIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
I+ SGG ++ +AE+ + + GV D +E++S T +NA F+ ++
Sbjct: 123 RIVYSGGSGNLIQNSVAEAPIAADLFARFGVAPDRFVVESRSRTTAENASFTRELVSPKP 182
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELAL 227
G+ +LV+SA+H+ RS F+ G + A+ D+ +A LS+ T++A
Sbjct: 183 GEVWLLVTSAFHMPRSITAFRAAGFDVTAAPVDWRTRGWGDAARPFDRLSSGLARTDVAA 242
Query: 228 KEYIGIL 234
E+ G+L
Sbjct: 243 HEWAGLL 249
>gi|3056882|gb|AAC14002.1| unknown [Actinosynnema pretiosum subsp. auranticum]
Length = 336
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 63 KKDGNI-IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K+ G+ IV+LG G +P R+ P R+ ++LY+ ++ SGG
Sbjct: 157 KRTGHTAIVVLGAG------VPGGRVTPLLAG--RLDRALKLYRRAAAKGASPLVVASGG 208
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILV 179
+E+ V N L E G+ + + E +S T++N + SS+++ + + G+ +++V
Sbjct: 209 QGPDEPASEAEVMANYLRERGIPDEALLEERESTSTWENLRLSSALLAERGVTGR-LLVV 267
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
+S+YH+ R+ + + G+ KA A+Y +P N +L E A
Sbjct: 268 TSSYHVPRAAILSRRAGL--KADVRGGRTAWY-FVP---NAFLREFA 308
>gi|119502798|ref|ZP_01624883.1| hypothetical protein MGP2080_05817 [marine gamma proteobacterium
HTCC2080]
gi|119461144|gb|EAW42234.1| hypothetical protein MGP2080_05817 [marine gamma proteobacterium
HTCC2080]
Length = 236
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 13/185 (7%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
+ P SP+ IVLLG + R + R+ LY + K
Sbjct: 49 RHPAFSPEELPAAQAIVLLGGASNGAARFG--RGADLNDAADRVMFAAELYFAGKA---- 102
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
I+ISGG P+ E+ + +L + R + LETQS TF NA + M+KN
Sbjct: 103 PIILISGGAPETM-QPEAELLAQQLQALQIPRKQLLLETQSRTTFDNAVMAGEMLKNAGL 161
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI------IPLSANFYLTELAL 227
++I+LV+S H++RS F+ G+ A+ +D+ +S IP A + A+
Sbjct: 162 QHILLVTSGAHMRRSLALFERQGLQVTAAATDHQIPKFSDPYIPGWIPTYARLARSSRAI 221
Query: 228 KEYIG 232
E++G
Sbjct: 222 HEWVG 226
>gi|157364443|ref|YP_001471210.1| hypothetical protein Tlet_1592 [Thermotoga lettingae TMO]
gi|157315047|gb|ABV34146.1| protein of unknown function DUF218 [Thermotoga lettingae TMO]
Length = 245
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 36/228 (15%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
FM L F F G+ L+ L+ SY+ + K + +V+LG G P
Sbjct: 39 FMIFLALCFYFFSSGLGALTLVLPLERSYEISI-----PKKIDAVVVLGGGIVKTPN--- 90
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD-PQKHGLAESIVYNNKLLESGV 143
+PS S R+ E +R+ K +IISGG P + E++V + + G
Sbjct: 91 -GYQPSQSSIVRLLEGVRIAKDFDSF-----LIISGGMLPLLNQPPEAVVMRDLAISLGF 144
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ--HFGI---- 197
+ I +E + TF+NA F+S + + +N+++V+SA H+KR+ F F +
Sbjct: 145 PAEAIIIEPDAKTTFENAIFTSQICREKGFQNVVVVTSAIHMKRAIYSFSKARFTVHPCP 204
Query: 198 ------NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++K SDYL + L+AN + A+ E IGIL +YR
Sbjct: 205 TGYLYNHSKLGWSDYLPNRDA---LTANLW----AIHEIIGIL--WYR 243
>gi|307946395|ref|ZP_07661730.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307770059|gb|EFO29285.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 267
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 111/234 (47%), Gaps = 21/234 (8%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
Q + + + F+ F+F G G + IL++ L+ +Q P Q DG IIVL G T
Sbjct: 35 QKLGRGLVLLSFLGFFAF-GLGPLGNILMQPLEDRFQTPEDVGQ--IDG-IIVLGGAIDT 90
Query: 78 IIPTIPAIRIEPSFQSYS-RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
++ R+ S + + R+ +L + + + + AE ++
Sbjct: 91 VVTNT---RLLTSINTAAERVTVVAQLAREHPKAEVIHSGGEGLLLGSGTSEAEGVL--P 145
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L G+ER+ I LE Q+ +T++NA + ++ ++G+ +LV+SAYH+ RS F+ G
Sbjct: 146 LFLSFGIERERIILEDQARNTWENATLTKEQLEPIEGQRWLLVTSAYHMPRSVGVFEAAG 205
Query: 197 --------INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
++ + ++ + L+ T++A+KE+IG L+AYY R
Sbjct: 206 WTGIVPYPVDQRTRGPQDAGRWF--VGLAEGLKRTDVAVKEWIG-LVAYYATGR 256
>gi|307267183|ref|ZP_07548690.1| protein of unknown function DUF218 [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306917799|gb|EFN48066.1| protein of unknown function DUF218 [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 191
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY-QRPLLSPQWKKDGNIIVLLGNGTTIIP 80
K+ ++LL FI GII + + + F+Y ++P KK IIVL G +
Sbjct: 2 KMILKIVWLLLVLFIIIGII--LEWQIISFAYNEKP------KKSDVIIVL---GCAVYG 50
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
IP+ P F++ R+ E +RLY II+SGG ++E+ LL+
Sbjct: 51 DIPS----PFFKA--RLEEALRLY----NEGYGRYIIVSGGKGPGENISEAEAGKGYLLK 100
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ I ++ +S T++N QFS ++ K +++S+ +HLKR+ + + GI
Sbjct: 101 KGIPEKAILIDDKSFSTYENLQFSKEIMDKKSLKRAVIISNKFHLKRASVIAKRVGIEAS 160
Query: 201 AS 202
S
Sbjct: 161 FS 162
>gi|296876546|ref|ZP_06900597.1| GdmH protein [Streptococcus parasanguinis ATCC 15912]
gi|296432539|gb|EFH18335.1| GdmH protein [Streptococcus parasanguinis ATCC 15912]
Length = 342
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 27/179 (15%)
Query: 64 KDGNIIVLLGNGT--TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K+ + I++LG+G +P + A R+E Y +Q +I+SGG
Sbjct: 158 KEPDAIIILGSGLIGDKVPPLLAQRLEKGKAIY-------------EQFERRPKLIVSGG 204
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILVS 180
+AE+ L+E GV D I +E +S TF+N FS +++ GK ++LV+
Sbjct: 205 QGSDELIAEAEAMAGYLIEHGVPEDAILIENRSRTTFENLTFSKRILEEEGLGKRVLLVT 264
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+++H R+ ++ + I ++ S +A +YL ++E +G++ Y++
Sbjct: 265 NSFHALRAGVFMRRLKIPGRSIGSR-----------TAFYYLPSAWIRETVGLVSLYWK 312
>gi|320140100|gb|EFW31959.1| conserved domain protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143369|gb|EFW35150.1| conserved domain protein [Staphylococcus aureus subsp. aureus
MRSA177]
Length = 208
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 28/180 (15%)
Query: 62 WKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ K+ +II++LG G T + + A R++ + Y +Q + II+S
Sbjct: 29 YNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIY-------------QQQASATKIIVS 75
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNII 177
GG ++E++ L+ GV++ DI +E+ S++T+ N +S +I N+ + I+
Sbjct: 76 GGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIV 135
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V+S +H+ R+ Q G++ S +F+L L +K+Y+G++ Y
Sbjct: 136 CVTSQFHVLRALRLAQKLGLSIDGVGSH----------TPYHFFLHVL-IKDYLGVMYQY 184
>gi|256377332|ref|YP_003100992.1| hypothetical protein Amir_3239 [Actinosynnema mirum DSM 43827]
gi|255921635|gb|ACU37146.1| protein of unknown function DUF218 [Actinosynnema mirum DSM 43827]
Length = 336
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 63 KKDGNI-IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K+ G+ I++LG G +P R+ P R+ ++LY+ ++ SGG
Sbjct: 157 KRTGHTAIIVLGAG------VPGGRVTPLLAG--RLDRALKLYRRAAAKGASPVVVASGG 208
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILV 179
+E+ V N L E G+ + + E +S T++N + SS+++ + + G+ +++V
Sbjct: 209 QGPDEPASEAEVMANYLRERGIPDEALLEERESTSTWENLRLSSALLAERGVTGR-LLVV 267
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
+S+YH+ R+ + + G+ KA A+Y +P N +L E A
Sbjct: 268 TSSYHVPRAAILSRRAGL--KADVRGGRTAWY-FVP---NAFLREFA 308
>gi|78188131|ref|YP_378469.1| hypothetical protein Cag_0148 [Chlorobium chlorochromatii CaD3]
gi|78170330|gb|ABB27426.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
Length = 251
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 41 IPTILLKHLQF-SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ-----SY 94
IPT+ + F R + PQ + IV+LG R+E + + +
Sbjct: 46 IPTVADGLMHFVEGNRTVALPQTLHQADAIVVLGGMIR--------RVEGAAEGEWNDAA 97
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVYNNKLLESGVERDDIKLETQ 153
R + LY++ K + T G P + E + + L+ GV + L
Sbjct: 98 DRFEAGVTLYRAGKAPLLLFT---RGRMPWSPDAVPEGELLVERALQRGVPEAALGLTAP 154
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL------ 207
+T A + +++ + IILV+SAYH++RSQL F+H G++ + D+
Sbjct: 155 VANTEDEAADVARLLRERGAERIILVTSAYHMRRSQLLFEHTGLSVEPYPVDFRVDSYPE 214
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A P + Y +E AL+E IG L YYR
Sbjct: 215 PAVLRFAPSAEALYRSETALRELIGWL--YYR 244
>gi|157149755|ref|YP_001450471.1| GdmH [Streptococcus gordonii str. Challis substr. CH1]
gi|157074549|gb|ABV09232.1| GdmH [Streptococcus gordonii str. Challis substr. CH1]
Length = 340
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 71/133 (53%), Gaps = 12/133 (9%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
+Q +I+SGG +E+ N L+E GV++D I +E +S TF+N FS ++
Sbjct: 191 EQFEGRPKLIVSGGQGADELTSEAAAMANYLMEQGVQKDAILIENRSRTTFENLTFSKAI 250
Query: 168 IKNMQ-GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
++ GK++++V++++H R+ ++ + I ++ S +A +YL
Sbjct: 251 LEEQGLGKSVLVVTNSFHALRAGVFMRRLKIPGRSVGSK-----------TAFYYLPSAW 299
Query: 227 LKEYIGILIAYYR 239
++E +G++ Y++
Sbjct: 300 IRETVGLVSLYWK 312
>gi|329571446|gb|EGG53133.1| hypothetical protein HMPREF9520_02827 [Enterococcus faecalis
TX1467]
Length = 401
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 24/184 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIII 118
P++ +D I +LG+G +P P Q+ RI + ++ YK+ + +++ I++
Sbjct: 214 PKYTQD--YIDVLGSGLINGEIVP-----PLLQA--RINKAIQFYKAQNRATLNPPKIVM 264
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNI- 176
SGG L ES+ L G+ DDI +E S +T +N +FS +MI++ N
Sbjct: 265 SGGQGPDELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQ 324
Query: 177 -ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ YHL R+ L+ + G+ + +A ++L ++E+I I++
Sbjct: 325 AIFTTNNYHLFRAGLFARMAGLKADGIGAK-----------TAFYFLPNAFIREFIAIVV 373
Query: 236 AYYR 239
Y R
Sbjct: 374 MYKR 377
>gi|229099276|ref|ZP_04230207.1| hypothetical protein bcere0020_44960 [Bacillus cereus Rock3-29]
gi|228684094|gb|EEL38041.1| hypothetical protein bcere0020_44960 [Bacillus cereus Rock3-29]
Length = 277
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 110/242 (45%), Gaps = 39/242 (16%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 40 MLFFMLLPIINPASLVSSHLEPIFAGISLISVYFFIH---LSNFLSAYFLYQFNRP---- 92
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC--TI 116
+++ + I++LG+G +P + A RI + Y KQ +++ TI
Sbjct: 93 --RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY------------WKQAAVNTPPTI 138
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK 174
I SGG GL E+ N +E G+ + E +S++T+QN FS ++ ++ +GK
Sbjct: 139 IFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMASLKPEGK 198
Query: 175 -NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
I ++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I
Sbjct: 199 YRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAI 247
Query: 234 LI 235
++
Sbjct: 248 VV 249
>gi|229016285|ref|ZP_04173233.1| hypothetical protein bcere0030_8630 [Bacillus cereus AH1273]
gi|229022523|ref|ZP_04179055.1| hypothetical protein bcere0029_8750 [Bacillus cereus AH1272]
gi|228738776|gb|EEL89240.1| hypothetical protein bcere0029_8750 [Bacillus cereus AH1272]
gi|228745056|gb|EEL95110.1| hypothetical protein bcere0030_8630 [Bacillus cereus AH1273]
Length = 332
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 28/175 (16%)
Query: 67 NIIVLLGNG---TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ I++LG+G +P + A R++ Y ++ R+ K II+SGG
Sbjct: 163 DFIIVLGSGLIGGDRVPPLLASRLDKGMDEY---IKSGRIPK----------IIVSGGQG 209
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVSSA 182
++E+ L+E G+ D+ E +S +T QN FS ++ ++ + I V++
Sbjct: 210 PDELVSEAAAMKKYLVEKGMNEKDVLTEDKSRNTLQNMLFSKKIMDTIKTDHKSIFVTNN 269
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
YH+ R+ +Y + G+ + S+ +A +YL L+EYIGIL+ Y
Sbjct: 270 YHVFRASIYARLSGLKCEGVGSN-----------TARYYLPSAFLREYIGILVMY 313
>gi|315187461|gb|EFU21217.1| protein of unknown function DUF218 [Spirochaeta thermophila DSM
6578]
Length = 249
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 35/210 (16%)
Query: 43 TILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
T L++HL + PL P W G + +V+LG G PA + P S +R++
Sbjct: 54 THLVEHLLLA---PLERAFPVWDAGGGVRYVVVLGGGAQA--GTPAGDV-PGVVSLARLW 107
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
+R + + ++++GG G +E + + + E G E ++ +E +S T+
Sbjct: 108 GGLRYARM-----LGVPLVLAGGSVWDEGKSEGEMMADLVRELGWE--EVVVEGESRTTW 160
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
+NA+ ++ M+ ++LV+SAYH++R+ F+ G+ + D+ + P
Sbjct: 161 ENARNTARMVGR---GPVLLVTSAYHMQRAVWCFRAQGVEVIPAPVDFRDER----PAHW 213
Query: 219 NFYL---------TELALKEYIGILIAYYR 239
FYL + AL+EY+G++ +YR
Sbjct: 214 IFYLGISAEAARDVQAALREYVGMV--WYR 241
>gi|258455282|ref|ZP_05703242.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|257862493|gb|EEV85261.1| conserved hypothetical protein [Staphylococcus aureus A5937]
Length = 322
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 28/180 (15%)
Query: 62 WKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ K+ +II++LG G T + + A R++ + Y +Q + II+S
Sbjct: 143 YNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIY-------------QQQASATKIIVS 189
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNII 177
GG ++E + L+ GV++ DI +E+ S++T+ N +S +I N+ + I+
Sbjct: 190 GGQGPDEPISEVLAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIV 249
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V+S +H+ R+ Q G++ S + + + +K+Y+G++ Y
Sbjct: 250 CVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQY 298
>gi|257867722|ref|ZP_05647375.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257874049|ref|ZP_05653702.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
gi|257801805|gb|EEV30708.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257808213|gb|EEV37035.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
Length = 356
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 36/232 (15%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
H IR +F + LL+ F+ + L L S P++ +D I++LG
Sbjct: 131 HFFPDWIRTLFGIVPLSLLYLFV-------VFLNFLSISVIYQFNHPRYNQD--FIIVLG 181
Query: 74 ----NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
NGTT+ P + A RI + Y F K +++SGG L
Sbjct: 182 AGLLNGTTVSPLL-AKRINTAISFYESQF---------KAKKTAPRLLMSGGQGSDEQLP 231
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKR 187
E++ + GV +I +ET S T++N +FS ++ +++ G I S+ YH+ R
Sbjct: 232 EAVAMKEYAIAQGVPEGEILVETNSTTTYENMKFSKEIMDSLKPNGYKAIFASNNYHIFR 291
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ LY KA A+Y YL L+E++ IL + R
Sbjct: 292 AGLYADQ--AQLKADGIGAPTAFY---------YLPNAFLREFVAILFMHKR 332
>gi|196041486|ref|ZP_03108779.1| conserved domain protein [Bacillus cereus NVH0597-99]
gi|196027734|gb|EDX66348.1| conserved domain protein [Bacillus cereus NVH0597-99]
Length = 345
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 108/240 (45%), Gaps = 35/240 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L +F I+S L + IF ++++ FI + L + + + RP
Sbjct: 108 ILFFILFAILSPASLFSSHLEPIFAGISLIIVYFFIH---LSNFLTAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+++ + I++LG+G +P + A SRI + + Y + TII
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLLA----------SRIHKAIDFYWKQAAVNTPPTIIF 208
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK-N 175
SGG GL E+ +E G+ + E +S++T+QN FS ++ ++ +GK
Sbjct: 209 SGGQGPDEGLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYR 268
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 269 SIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAIVV 317
>gi|148255961|ref|YP_001240546.1| hypothetical protein BBta_4612 [Bradyrhizobium sp. BTAi1]
gi|146408134|gb|ABQ36640.1| hypothetical protein BBta_4612 [Bradyrhizobium sp. BTAi1]
Length = 262
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 14/217 (6%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
MLL + +G + +++L L+ + P P IIVL G + P + + P
Sbjct: 46 MLLLAVLGLTPLGSLMLSPLESRF--PKWDPAKGAPDGIIVL---GGPVDPDLSIMYGMP 100
Query: 90 -SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERD 146
+ R+ + L + + I+ +GG E+ V + LL GV ++
Sbjct: 101 VTVAGADRLIQAAALARRYP----NARIVFTGGSANLISTDAREADVAADILLSLGVAKE 156
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+ LE +S +T++NA FS +M+ G+ +LV+SA+H+ RS F+ G + D+
Sbjct: 157 RLTLERESRNTYENAVFSKAMVAPKPGERWLLVTSAFHMPRSVGLFRKAGFPVEPYPVDW 216
Query: 207 -LNAYYSIIPLS-ANFYLTELALKEYIGILIAYYRGN 241
+ + +S ++A++E++G++ RG
Sbjct: 217 RVGRVLDVDGVSLLGLRRADIAVREWVGLVAYRLRGR 253
>gi|229032461|ref|ZP_04188429.1| hypothetical protein bcere0028_45010 [Bacillus cereus AH1271]
gi|228728830|gb|EEL79838.1| hypothetical protein bcere0028_45010 [Bacillus cereus AH1271]
Length = 344
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 32/190 (16%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
+ + RP +++ + I++LG+G +P + A SRI + + Y
Sbjct: 154 YQFNRP------RRNQDFIIVLGSGLINDKVPPLLA----------SRIHKAIDFYWKQA 197
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ TII SGG GL E+ N +E G+ + E +S++T+QN FS ++
Sbjct: 198 AVNTAPTIIFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIM 257
Query: 169 KNM--QGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTEL 225
++ +GK+ I ++ +HL R+ +Y + G+N++ S +A +Y
Sbjct: 258 DSLKPEGKHRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNA 306
Query: 226 ALKEYIGILI 235
++EY+ I++
Sbjct: 307 MIREYVAIVV 316
>gi|331701646|ref|YP_004398605.1| hypothetical protein Lbuc_1288 [Lactobacillus buchneri NRRL
B-30929]
gi|329128989|gb|AEB73542.1| protein of unknown function DUF218 [Lactobacillus buchneri NRRL
B-30929]
Length = 351
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 37/235 (15%)
Query: 24 FFMSCFMLLFSFI---GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI-- 78
F M+ +L ++I W + ++LL L F P+ KD I++LG G
Sbjct: 132 FVMTFLTMLIAYILLTVWNTLSSMLLYQLYF--------PRSNKD--YIIVLGAGLVDGH 181
Query: 79 -IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ + RI Y++ +++++ K+ ++ SGG L ES+ +
Sbjct: 182 KVGRLLGGRINKGIAFYNQ-----QIHRTNKR----AKLVFSGGQGGDELLPESVAMRDY 232
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---IILVSSAYHLKRS-----Q 189
LE G D +E QS++TFQN +FS ++I G I+ V+S YH R+ +
Sbjct: 233 ALEHGARGADTLIEDQSVNTFQNMKFSKALIDKDAGSTNHRIVFVTSNYHTLRAGILSRE 292
Query: 190 LYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ FGI +K NA Y +++ + F+L L L +++ G
Sbjct: 293 VGMHAFGIGSKTPFYYLPNAVIREYLALVVMHKKFHLVMLGLMLVASVIVGVLAG 347
>gi|294507679|ref|YP_003571737.1| hypothetical protein SRM_01864 [Salinibacter ruber M8]
gi|294344007|emb|CBH24785.1| Conserved hypothetical protein [Salinibacter ruber M8]
Length = 180
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 13/153 (8%)
Query: 101 MRLYKSCKQHSMHCT------IIISGG-DPQKHGLAESIVYNNKLLES-GVERDDIKLET 152
M L C T +I SGG P K A N LL+ GV D I LE+
Sbjct: 1 MTLPTGCGTRRASTTPARCPLVIASGGTQPWKRPDAREAPATNVLLQDWGVPGDAILLES 60
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN-----TKASCSDYL 207
+S +T++NA ++ ++ ++LV+SA H+ R+ F+ GI T D
Sbjct: 61 KSANTYENATRTAELLDRRGLNCVLLVTSALHMPRALAVFRSAGIKAVPAPTDVQVGDRN 120
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++P + + A++EY+G L+ +RG
Sbjct: 121 YTVLDVLPDAGALAGSTAAIREYVGYLVYDWRG 153
>gi|229128467|ref|ZP_04257446.1| hypothetical protein bcere0015_29130 [Bacillus cereus BDRD-Cer4]
gi|228654970|gb|EEL10829.1| hypothetical protein bcere0015_29130 [Bacillus cereus BDRD-Cer4]
Length = 297
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 37/236 (15%)
Query: 7 FLIVSYW---HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
FL++S + ++IR +++ + + L+ FI + L + + + RP K
Sbjct: 64 FLVISLVEPINFFPEAIRTLYWGAVLISLYLFID---LSNFLTAYFLYQFNRP------K 114
Query: 64 KDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG+G +P + A SRI + YK + S II SGG
Sbjct: 115 YNQDFIIVLGSGLINDKVPPLLA----------SRINRAIEFYKKQEAVSSPPKIIFSGG 164
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILV 179
++E+ + +G+ ++ E +S T+QN FS ++++++G N I
Sbjct: 165 QGSDENISEAKAMQEYAVNNGIPLENTIKEDRSTTTYQNMLFSKRIMESLKGTQYNCIFS 224
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +H+ R+ LY + G+N++ S +A +Y ++EYI I +
Sbjct: 225 TNNFHVFRAGLYAKIVGLNSQGIGSK-----------TAFYYWPNAMIREYIAIFV 269
>gi|254501304|ref|ZP_05113455.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222437375|gb|EEE44054.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 176
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II+ G H AE+ V +L+ GV + I+ ET+S +T +NA FS+ +++ + +N
Sbjct: 49 IIVGCGGLGNHPPAEAEVMKRELIALGVPQSAIRTETRSRNTLENAVFSARILRREKLEN 108
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKAS 202
++VS YHL R+ L FQ G + S
Sbjct: 109 TLIVSDRYHLPRAVLCFQTLGFSATGS 135
>gi|229169539|ref|ZP_04297243.1| hypothetical protein bcere0007_44860 [Bacillus cereus AH621]
gi|228613929|gb|EEK71050.1| hypothetical protein bcere0007_44860 [Bacillus cereus AH621]
Length = 277
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 36/192 (18%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
+ + RP +++ + I++LG+G +P + A RI + Y K
Sbjct: 87 YQFNRP------RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY------------WK 128
Query: 109 QHSMHC--TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS 166
Q +++ TII SGG GL E+ N +E G+ + E +S++T+QN FS
Sbjct: 129 QSAVNTPPTIIFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMSFSKE 188
Query: 167 MIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLT 223
++ ++ +GK I ++ +HL R+ +Y + G+N++ S +A +Y
Sbjct: 189 IMDSLKPEGKYKSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWP 237
Query: 224 ELALKEYIGILI 235
++EY+ I++
Sbjct: 238 NAMIREYVAIVV 249
>gi|229147646|ref|ZP_04275990.1| hypothetical protein bcere0012_47720 [Bacillus cereus BDRD-ST24]
gi|228635855|gb|EEK92341.1| hypothetical protein bcere0012_47720 [Bacillus cereus BDRD-ST24]
Length = 343
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 108/235 (45%), Gaps = 34/235 (14%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
W+ ++ + +SIR +++ + + ++ F+ + L + + + RP K
Sbjct: 111 WVISLIEPVNFFPESIRTLYWGAVLISIYLFVD---LSNFLTAYFLYQFNRP------KY 161
Query: 65 DGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + I++LG+G +P + A SRI + Y+ + S II SGG
Sbjct: 162 NQDFIIVLGSGLINDKVPPLLA----------SRINRAIEFYRKQEAVSSPPKIIFSGGQ 211
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVS 180
++E+ + +++G+ + E +S T+QN +S ++++++G N I +
Sbjct: 212 GPDENISEAEAMQDYAVKNGIPLEHTIKENRSTTTYQNMLYSKEIMESLKGFQYNCIFST 271
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +H+ R+ LY + G+N++ S +A +Y ++EYI I +
Sbjct: 272 NNFHVFRAGLYAKIVGLNSQGIGSK-----------TAFYYWPNAMIREYIAIFV 315
>gi|254852499|ref|ZP_05241847.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|300764214|ref|ZP_07074209.1| hypothetical protein LMHG_10188 [Listeria monocytogenes FSL N1-017]
gi|258605808|gb|EEW18416.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|300515204|gb|EFK42256.1| hypothetical protein LMHG_10188 [Listeria monocytogenes FSL N1-017]
Length = 344
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIII 118
P++ +D +++LG+G I R+ P S R+ ++ Y K + T I+
Sbjct: 159 PRYNQD--FLIVLGSGL-----IGGDRVPPLLAS--RLNRAIKFYDKQYAKKGKRATFIV 209
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNII 177
SGG ++E+ L+E G++ + I +E QS++T QN +FS + M + N +
Sbjct: 210 SGGQGANETISEAEAMRGYLIEKGIDENFIIMEDQSVNTLQNMKFSKAKMDAILSNYNSL 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 270 FSTNNFHLFRAGIYARKAGLKSQGIGAK-----------TALYYMPNALIREFIAITVMY 318
Query: 238 YR 239
+
Sbjct: 319 KK 320
>gi|163942531|ref|YP_001647415.1| hypothetical protein BcerKBAB4_4633 [Bacillus weihenstephanensis
KBAB4]
gi|163864728|gb|ABY45787.1| protein of unknown function DUF218 [Bacillus weihenstephanensis
KBAB4]
Length = 344
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 36/198 (18%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A RI + Y
Sbjct: 148 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY-------- 193
Query: 103 LYKSCKQHSMHC--TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
KQ +++ TII SGG GL E+ N +E G+ + E +S++T+QN
Sbjct: 194 ----WKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQN 249
Query: 161 AQFSSSMIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
FS ++ ++ +GK I ++ +HL R+ +Y + G+N++ S +
Sbjct: 250 MSFSKEIMDSLKPEGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------T 298
Query: 218 ANFYLTELALKEYIGILI 235
A +Y ++EY+ I++
Sbjct: 299 AFYYWPNAMIREYVAIVV 316
>gi|239832066|ref|ZP_04680395.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824333|gb|EEQ95901.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 279
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 27/222 (12%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG--NGTTIIPTIPA 84
+ F+ F+ +G +LL L+ + +P PQ + DG I+VL G NG I A
Sbjct: 63 TLFLAAFTTLG-----AVLLAPLEDRFAKPDAMPQ-RVDG-IVVLGGYMNGE-----INA 110
Query: 85 IRIEPSFQSYS-RIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLES 141
R S + RIFE MRL + +I+SGG+ + E+ L +
Sbjct: 111 GRKGFELNSAADRIFEAMRLARLYPD----AKVIVSGGEGAFFEKSAKEADSTRQMLADL 166
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G + E +S +T +NA FS + + G+ +LV+SAYH+ RS F+ G + A
Sbjct: 167 GFSGERYIFENKSRNTVENAVFSKELAQPKPGETWLLVTSAYHMPRSIGCFRKAGFDVVA 226
Query: 202 SCSDY---LNAYYSIIPLSANFYLTE--LALKEYIGILIAYY 238
D+ + ++++ S N L+ +A++E+ G L AY+
Sbjct: 227 WPVDFKTRASEHFALYLESPNEALSRFSVAMREW-GGLAAYW 267
>gi|229118290|ref|ZP_04247646.1| hypothetical protein bcere0017_45590 [Bacillus cereus Rock1-3]
gi|228665120|gb|EEL20606.1| hypothetical protein bcere0017_45590 [Bacillus cereus Rock1-3]
Length = 345
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 36/198 (18%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A RI + Y
Sbjct: 149 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY-------- 194
Query: 103 LYKSCKQHSMHC--TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
KQ +++ TII SGG GL E+ N +E G+ + E +S++T+QN
Sbjct: 195 ----WKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQN 250
Query: 161 AQFSSSMIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
FS ++ ++ +GK I ++ +HL R+ +Y + G+N++ S +
Sbjct: 251 MSFSKEIMDSLKPEGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------T 299
Query: 218 ANFYLTELALKEYIGILI 235
A +Y ++EY+ I++
Sbjct: 300 AFYYWPNAMIREYVAIVV 317
>gi|153009344|ref|YP_001370559.1| hypothetical protein Oant_2014 [Ochrobactrum anthropi ATCC 49188]
gi|151561232|gb|ABS14730.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 235
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG--NGTTIIPTIPAIRIEPSFQ 92
F + + ++LL L+ + +P PQ DG I+VL G NG I A R
Sbjct: 22 FAAFTTLGSVLLAPLEDRFAKPDAMPQ-HVDG-IVVLGGYMNGD-----INAGRKGFELN 74
Query: 93 SYS-RIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIK 149
S + RIFE MRL + +I+SGGD + E+ L++ G +
Sbjct: 75 SAADRIFEAMRLARLYPD----ARVIVSGGDGAFFEEAAKEADSTRQMLIDLGFSGERYI 130
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY--- 206
E +S +T +NA FS + + G+ +LV+SAYH+ RS F+ + A DY
Sbjct: 131 YENKSRNTVENAIFSKELAQPKPGETWLLVTSAYHMPRSVGCFRKADFDVVAWPVDYKTR 190
Query: 207 LNAYYSIIPLSANFYLTE--LALKEYIGILIAYY 238
+++ S N L+ +A++E++G L AY+
Sbjct: 191 ARERFALYLESPNEALSRFSVAMREWVG-LAAYW 223
>gi|229014000|ref|ZP_04171124.1| hypothetical protein bmyco0001_44080 [Bacillus mycoides DSM 2048]
gi|229135650|ref|ZP_04264428.1| hypothetical protein bcere0014_45390 [Bacillus cereus BDRD-ST196]
gi|228647830|gb|EEL03887.1| hypothetical protein bcere0014_45390 [Bacillus cereus BDRD-ST196]
gi|228747256|gb|EEL97135.1| hypothetical protein bmyco0001_44080 [Bacillus mycoides DSM 2048]
Length = 257
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 107/234 (45%), Gaps = 39/234 (16%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
I++ L + + IF + ++ FI + L + + + RP +++ +
Sbjct: 28 IINPASLFSEHFQFIFAAISLVTMYFFIH---LSNFLSAYFLYQFNRP------RRNQDF 78
Query: 69 IVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC--TIIISGGDPQ 124
I++LG+G +P + A RI + Y KQ +++ TII SGG
Sbjct: 79 IIVLGSGLINDKVPPLLASRINKAIDFY------------WKQAAVNTPPTIIFSGGQGP 126
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK-NIILVSS 181
GL E+ N +E G+ + E +S++T+QN FS ++ ++ +GK I ++
Sbjct: 127 DEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYKSIFTTN 186
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 187 NFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAIVV 229
>gi|227824083|ref|YP_002828056.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
gi|227343085|gb|ACP27303.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
Length = 261
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 107/245 (43%), Gaps = 23/245 (9%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L + LI++ +H + + F+ LF+ G L+ L+ + RP SP
Sbjct: 22 ILVGMLLILARFHRSGGVFASLGLIVLFLSLFTTTG-----PYFLQMLEDRFPRP--SPP 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSF-QSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IIVL G ++ A R F Q+ R E +RL K+ I++SG
Sbjct: 75 PAEIACIIVLGGAFENVVI---ASRGGMEFNQAADRFVEAVRLAKAYPA----ARILVSG 127
Query: 121 GDPQKHGLAESIVYNNKLLES--GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GD G E ++ + G+ D + E S TF+NA+++ ++ + L
Sbjct: 128 GDGSISGAYEGDARASQGFFNAFGIGADRVIREEDSRTTFENARYTKDLLAANGLERCAL 187
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
V+SAYH+ RS F+ GI +DY + + S N L A KE+ G
Sbjct: 188 VTSAYHMPRSVGLFRANGIAVVPWPADYRTSGKVRLGFDFSQPSLNAQLATTAAKEWTG- 246
Query: 234 LIAYY 238
L+AYY
Sbjct: 247 LLAYY 251
>gi|302392084|ref|YP_003827904.1| hypothetical protein Acear_1326 [Acetohalobium arabaticum DSM 5501]
gi|302204161|gb|ADL12839.1| protein of unknown function DUF218 [Acetohalobium arabaticum DSM
5501]
Length = 264
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 30/206 (14%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGN--IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
+L K L+ + L+S + K GN IVLLG+G + + +E + +R++ T
Sbjct: 69 LLTKPLESQFDPLLISNRESKVGNSTAIVLLGSG---VRRGTSRGVEIGEITLARLYRTW 125
Query: 102 RLYKSCKQHSMHCTIIISGGD-PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
+++K +++SGG P + + V LL+ GV+ D I LE ++ +T+QN
Sbjct: 126 QIHKET-----GLDLVVSGGVVPGADNTSGAEVMKEVLLDLGVKEDKIILEKKAKNTWQN 180
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ------------HFGINTKASCSDYLN 208
A ++ +++ + + IILV+SA H+KR+ F+ ++ NT S DYL
Sbjct: 181 AVNTALLLEEREYEQIILVTSALHMKRAVYSFERNCNQRLIPAPANYTFNTDVSLLDYL- 239
Query: 209 AYYSIIPLSANFYLTELALKEYIGIL 234
P + + AL E+IG++
Sbjct: 240 ------PNRESLDNSLAALHEWIGLV 259
>gi|123966515|ref|YP_001011596.1| hypothetical protein P9515_12821 [Prochlorococcus marinus str. MIT
9515]
gi|123200881|gb|ABM72489.1| Hypothetical protein P9515_12821 [Prochlorococcus marinus str. MIT
9515]
Length = 236
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
F S ++L F G+ L + L++ ++R S DG IV+L G + P
Sbjct: 16 FIYSALIILLVFSN-GVFSECLWRLLEYPWKRLEFSSINSADG--IVVLSGGRHL-PLGN 71
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAESIVYNNKLLES 141
IE + R + LYK+ K + + I +GG + E +Y + +
Sbjct: 72 TKIIE--WHDPDRFLAGIELYKANKSNKL----IFTGGVSLLTSNLPPEGTIYIKEAISM 125
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
G+ + D+ +T + A+ +++ K + K IILV+SA+H+KR++ F+ G+N
Sbjct: 126 GIPKKDVLTTYPVYNTLEEAEAVKALLYREKPLSKKKIILVTSAFHMKRAKKVFEREGMN 185
Query: 199 TKASCSDY---------LNAYYSIIPLSANFYLTELALKEYIGILI 235
D+ L + IP S+N Y + +A++E IG +I
Sbjct: 186 VLPYPVDFKSSRNFISSLTNIFKWIPSSSNLYKSSMAVREIIGRMI 231
>gi|300769627|ref|ZP_07079511.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308179587|ref|YP_003923715.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|300492780|gb|EFK27964.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045078|gb|ADN97621.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 340
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 37/213 (17%)
Query: 33 FSFIGW--GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT-IPAIRIEP 89
FSFI + + T L +H Q Y +++LG G ++P P +
Sbjct: 142 FSFIAYLLACVMTRLGRHRQIDY---------------MIVLGAG--LMPNGQPTRTLAY 184
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
Q+ ++ + R ++ TI++SGG +AES L++ GV RD I+
Sbjct: 185 RLQTAAKYYRVQR-----ARYHQPITIVVSGGQGPDEVMAESTAMRQYLVDQGVPRDAIQ 239
Query: 150 LETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
E +S T +N +FS ++I Q ++V+S YH+ R+ ++ + +N +
Sbjct: 240 EENRSTSTIENLKFSHALIVRQQPFYRAVIVTSGYHVLRANIFARQLHLNLTGIGAH--- 296
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
PL +YL +EY+ +++ Y N
Sbjct: 297 -----TPL---YYLPFAMFREYLALIVMYRWAN 321
>gi|28377368|ref|NP_784260.1| integral membrane protein [Lactobacillus plantarum WCFS1]
gi|28270200|emb|CAD63099.1| integral membrane protein [Lactobacillus plantarum WCFS1]
Length = 340
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 37/213 (17%)
Query: 33 FSFIGW--GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT-IPAIRIEP 89
FSFI + + T L +H Q Y +++LG G ++P P +
Sbjct: 142 FSFIAYLLACVMTRLGRHRQIDY---------------MIVLGAG--LMPNGQPTRTLAY 184
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
Q+ ++ + R ++ TI++SGG +AES L++ GV RD I+
Sbjct: 185 RLQAAAKYYRVQR-----ARYHQPITIVVSGGQGPDEVMAESTAMRQYLVDQGVPRDAIQ 239
Query: 150 LETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
E +S T +N +FS ++I Q ++V+S YH+ R+ ++ + +N +
Sbjct: 240 EENRSTSTIENLKFSHALIVRQQPFYRAVIVTSGYHVLRANIFARQLHLNLTGIGAH--- 296
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
PL +YL +EY+ +++ Y N
Sbjct: 297 -----TPL---YYLPFAMFREYLALIVMYRWAN 321
>gi|293553828|ref|ZP_06674443.1| integral membrane protein [Enterococcus faecium E1039]
gi|291602034|gb|EFF32271.1| integral membrane protein [Enterococcus faecium E1039]
Length = 399
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG-- 73
L Q I +FF +L++ FI + L S+ P++ +D IV+LG
Sbjct: 177 LPQWINALFFCVPLILIYLFI-------VFYNFLTVSFLYQFNRPRYNQD--FIVVLGAG 227
Query: 74 --NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAE 130
NG T+ P + RI + + Y++ + +++ I++ SGG L E
Sbjct: 228 LINGETVSPLLA-----------KRINKAIAFYRAQSRATLNPPILLMSGGQGADEKLPE 276
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGK-NIILVSSAYHLKRS 188
+I +E G+ DI +ET S T +N +S M + M+G I S+ YH+ R+
Sbjct: 277 AIAMKQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRA 336
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
LY + + + +A +YL L+EYI IL+
Sbjct: 337 GLYARQAKLKANGIGAK-----------TAFYYLPNAFLREYIAILM 372
>gi|30021293|ref|NP_832924.1| hypothetical protein BC3183 [Bacillus cereus ATCC 14579]
gi|29896847|gb|AAP10125.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579]
Length = 343
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 37/236 (15%)
Query: 7 FLIVSYW---HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
FL++S + ++IR +++ + + L+ FI + L + + + RP K
Sbjct: 110 FLVISLVEPINFFPEAIRTLYWGAVLISLYLFID---LSNFLTAYFLYQFNRP------K 160
Query: 64 KDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG+G +P + A SRI + YK + S II SGG
Sbjct: 161 YNQDFIIVLGSGLINDKVPPLLA----------SRINRAIEFYKKQEAVSSPPKIIFSGG 210
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILV 179
++E+ + +G+ ++ E +S T+QN FS ++++++G N I
Sbjct: 211 QGSDENISEAKAMQEYAVNNGIPLENTIKEDRSTTTYQNMLFSKRIMESLKGTQYNCIFS 270
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +H+ R+ LY + G+N++ S +A +Y ++EYI I +
Sbjct: 271 TNNFHVFRAGLYAKIVGLNSQGIGSK-----------TAFYYWPNAMIREYIAIFV 315
>gi|150020778|ref|YP_001306132.1| hypothetical protein Tmel_0886 [Thermosipho melanesiensis BI429]
gi|149793299|gb|ABR30747.1| protein of unknown function DUF218 [Thermosipho melanesiensis
BI429]
Length = 236
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
KDG I+VL G A IE + R+ + +YK + I+++GG
Sbjct: 72 KDGTIVVLGGGIVNY-----ANNIEIGTHTLKRLLKGWEIYKEKR-----LKIVVAGG-V 120
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
G+ E+ V + L++ GV +DDI E S T +NA+ S + K+ NIILV+S
Sbjct: 121 IGDGIREADVMKDFLIKLGVSKDDIITENTSRTTKENAKNVSKITKD---PNIILVTSFL 177
Query: 184 HLKRSQLYFQHFGINT--KASCS---DYLNAYYSIIPLSANFYLTELALKEYIGIL 234
H+KR+++ F+ + + C D + +P Y L E++GIL
Sbjct: 178 HMKRAKMLFEKYTQSNIIPVVCDYPIDLRKNFLDFLPSPRGIYTFSLITHEFLGIL 233
>gi|326799244|ref|YP_004317063.1| hypothetical protein Sph21_1831 [Sphingobacterium sp. 21]
gi|326550008|gb|ADZ78393.1| protein of unknown function DUF218 [Sphingobacterium sp. 21]
Length = 242
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ K F+ F+ LF I IP IL+ L+ Y+ S K D I++LG G T
Sbjct: 28 VSKRLFVGGFLWLF-IITCSPIPNILIYGLESKYRTYSRSRNDKID--YILVLGGGFTEN 84
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
T+P + S S SRI E MR+ K ++ G ++++ +Y + +
Sbjct: 85 KTLPNFE-QLSTASLSRISEAMRIKKI-----FPAAKLVMSGSKMNRTISQAEIYAHTVF 138
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
E G +R+D+ L + +T + A+ S K +G ILV+ A H++R+ F+
Sbjct: 139 ELGFQRNDVVLLNEPKNTAEEAK--SFNNKFGKGAKFILVTDAAHMQRALYAFRDMS-PI 195
Query: 200 KASCSDYLNA----YYSIIPLSANFYLTELALKEYIGIL 234
A + Y+ YY+ P + +A+ EYIG+L
Sbjct: 196 PAPTNHYVKEPEKIYYAFKPSYLKIKMMNIAIHEYIGLL 234
>gi|325571076|ref|ZP_08146648.1| hypothetical protein HMPREF9087_2937 [Enterococcus casseliflavus
ATCC 12755]
gi|325156161|gb|EGC68347.1| hypothetical protein HMPREF9087_2937 [Enterococcus casseliflavus
ATCC 12755]
Length = 399
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 36/215 (16%)
Query: 38 WGIIP-------TILLKHLQFSYQRPLLSPQWKKDGNIIVLLG----NGTTIIPTIPAIR 86
+G++P + L L S P++ +D I++LG NGTT+ P + A R
Sbjct: 184 FGVVPLSLMYLFVVFLNFLSISVIYQFNHPRYNQD--FIIVLGAGLLNGTTVSPLL-AKR 240
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
I + Y F K +++SGG L E++ + GV
Sbjct: 241 INKAISFYEAQF---------KAKKTAPRLLMSGGQGSDEKLPEAVAMKEYAVAQGVPEG 291
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+I +ET S T++N +FS ++ +++ G +I S+ YH+ R+ LY KA
Sbjct: 292 EILVETNSTTTYENMKFSKEIMDSLKPNGYKVIFSSNNYHIFRAGLYADQ--AQLKADGI 349
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A+Y YL L+E++ IL + R
Sbjct: 350 GAPTAFY---------YLPNAFLREFVAILFMHKR 375
>gi|322389504|ref|ZP_08063055.1| hypothetical protein HMPREF8577_0525 [Streptococcus parasanguinis
ATCC 903]
gi|321143779|gb|EFX39206.1| hypothetical protein HMPREF8577_0525 [Streptococcus parasanguinis
ATCC 903]
Length = 324
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 27/180 (15%)
Query: 63 KKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+K+ + I++LG+G +P + A R++ Y +Q +I+SG
Sbjct: 139 RKEPDAIIILGSGLIGDKVPPLLAQRLDKGKAIY-------------EQFEGRPKLIVSG 185
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILV 179
G +AE+ L+E GV D I +E +S TF+N FS +++ GK +++V
Sbjct: 186 GQGSDELIAEAEAMAGYLMEHGVPEDAILIENRSRTTFENLTFSKRLLEEEGLGKRVLVV 245
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++++H R+ ++ + I ++ S +A +YL ++E IG++ Y++
Sbjct: 246 TNSFHALRAGVFMRRLKIPGRSIGSR-----------TAFYYLPSAWIRETIGLVSLYWK 294
>gi|293568622|ref|ZP_06679937.1| integral membrane protein [Enterococcus faecium E1071]
gi|291588582|gb|EFF20415.1| integral membrane protein [Enterococcus faecium E1071]
Length = 399
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG-- 73
L Q I +FF +L++ FI + L S+ P++ +D IV+LG
Sbjct: 177 LPQWINALFFCIPLILIYLFI-------VFYNFLTVSFLYQFNRPRYNQD--FIVVLGAG 227
Query: 74 --NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAE 130
NG T+ P + RI + + Y + + +++ I++ SGG + E
Sbjct: 228 LINGETVSPLLA-----------KRINKAIAFYGAQSRATLNPPILLMSGGQGADEKVPE 276
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGK-NIILVSSAYHLKRS 188
+I +E G+ DI +ET S T +N ++S M + M+G I S+ YH+ R+
Sbjct: 277 AIAMKQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRA 336
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
LY + + + +A +YL L+EYI ILI
Sbjct: 337 GLYARQAKLKANGIGAK-----------TAFYYLPNAFLREYIAILI 372
>gi|220910044|ref|YP_002485355.1| hypothetical protein Cyan7425_4689 [Cyanothece sp. PCC 7425]
gi|219866655|gb|ACL46994.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7425]
Length = 262
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 25/190 (13%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I+VL G P P I + ++ R+ +LY+ K +I+SGG
Sbjct: 79 IVVLGGAIKGADPPRPWIEVA---EAGDRLLYAAKLYRDGKAP----LVILSGGRISWLS 131
Query: 128 LAESIVYNNK---LLES-GVERDDIKLETQSLDTFQNAQFSSSMIK--NMQGKNIILVSS 181
A + + L+E+ GV + ++ SL+T+QNA ++K N+ G +I+LV+S
Sbjct: 132 TATAAPESADMAILIETMGVPASALLQDSTSLNTYQNAVNVQKILKEKNITG-SILLVTS 190
Query: 182 AYHLKRSQLYFQHFGINTKASCSDY-----------LNAYYSIIPLSANFYLTELALKEY 230
A+H+ R+ F GI A+ +D+ + S++P + T LALKEY
Sbjct: 191 AFHMPRALAIFNRLGIPAIAAPTDFHTTQTAELSGAIGFLLSLLPSAETLQNTTLALKEY 250
Query: 231 IGILIAYYRG 240
+G+++ RG
Sbjct: 251 VGLVVYRLRG 260
>gi|228999589|ref|ZP_04159166.1| hypothetical protein bmyco0003_41440 [Bacillus mycoides Rock3-17]
gi|229007135|ref|ZP_04164760.1| hypothetical protein bmyco0002_40340 [Bacillus mycoides Rock1-4]
gi|228754114|gb|EEM03534.1| hypothetical protein bmyco0002_40340 [Bacillus mycoides Rock1-4]
gi|228760115|gb|EEM09084.1| hypothetical protein bmyco0003_41440 [Bacillus mycoides Rock3-17]
Length = 342
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 33/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLL + LIV + IF F++++ F I T L + + + RP
Sbjct: 107 MLLIMLSLIVDPTRFFSPHFQPIFTGIFFIMVYFFFH---ISTFLTAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ + + I++LG+G +P + A SRI + + Y + TII
Sbjct: 160 --RCNQDFIIVLGSGLINDKVPPLLA----------SRINKAIDFYHKQAAVASPPTIIF 207
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NII 177
SGG L E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 208 SGGQGPDENLPEAEAMQKYAIEKGIPIEHTVQENRSVNTYQNMLFSKQIMDSLKDRYKSI 267
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ LY + G+N++ S +A +Y ++EYI I++
Sbjct: 268 FTTNNFHLFRAGLYAKQAGLNSQGIGSK-----------TAFYYWPNAMIREYIAIVV 314
>gi|295112887|emb|CBL31524.1| Uncharacterized conserved protein [Enterococcus sp. 7L76]
Length = 371
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 23/170 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIII 118
P++ +D IV+LG+G +P P Q+ RI + ++ YK+ + +++ I++
Sbjct: 214 PKYTQD--YIVVLGSGLINGEIVP-----PLLQA--RINKAIQFYKAQNRATLNPPKIVM 264
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNI- 176
SGG L ES+ L G+ DDI +E S +T +N +FS +MI++ N
Sbjct: 265 SGGQGPDELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQ 324
Query: 177 -ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTEL 225
I ++ YHL R+ L+ + G+ KA A+Y FYLT L
Sbjct: 325 AIFTTNNYHLFRAGLFARMAGL--KADGIGAKTAFY--------FYLTRL 364
>gi|42784000|ref|NP_981247.1| hypothetical protein BCE_4954 [Bacillus cereus ATCC 10987]
gi|42739930|gb|AAS43855.1| conserved domain protein [Bacillus cereus ATCC 10987]
Length = 345
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 32/196 (16%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A SRI + +
Sbjct: 149 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLA----------SRIHKAID 192
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
Y + TII SGG GL E+ +E G+ + E +S++T+QN
Sbjct: 193 FYWKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNML 252
Query: 163 FSSSMIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
FS ++ ++ +GK N I ++ +HL R+ +Y + G+N++ S +A
Sbjct: 253 FSKEIMDSLKPEGKYNSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAF 301
Query: 220 FYLTELALKEYIGILI 235
+Y ++EY+ I++
Sbjct: 302 YYWPNAMIREYVAIVV 317
>gi|114704894|ref|ZP_01437802.1| hypothetical protein FP2506_08156 [Fulvimarina pelagi HTCC2506]
gi|114539679|gb|EAU42799.1| hypothetical protein FP2506_08156 [Fulvimarina pelagi HTCC2506]
Length = 270
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGN-GTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
+ +L+ ++RP+ P + DG IIVL G T + T I + + S R
Sbjct: 61 MTAYLENRFERPVPMPA-EVDG-IIVLGGAFDTRVARTRGVIELNEAADRASVSVALART 118
Query: 104 YKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
Y ++ SGG + + E+ L G++ + +KL+ ++ DTF+NA
Sbjct: 119 YPGAD-------VLFSGGVAAAFREDIPETQSAEQFYLGLGLDPNRLKLDGKARDTFENA 171
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII--PLSA- 218
++ ++ G+ +LV+SAYH+ R+ F+ G + DY + + P +A
Sbjct: 172 VYAKALADPQPGETWLLVTSAYHMPRAMGCFRTVGFDVVPYPVDYRTPEGADVWRPSTAT 231
Query: 219 --NFYLTELALKEYIGILIAYYRGNR 242
N A++EYIG L AY+ R
Sbjct: 232 TRNLEKVHFAIREYIG-LAAYWAAGR 256
>gi|220933067|ref|YP_002509975.1| hypothetical protein Hore_22350 [Halothermothrix orenii H 168]
gi|219994377|gb|ACL70980.1| uncharacterized conserved protein [Halothermothrix orenii H 168]
Length = 256
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 112/245 (45%), Gaps = 21/245 (8%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI---GWGIIPTILLKHLQFSYQRPLLSPQW 62
I+++++ + + +S R I ++C L+ +I G++ ++ +F Y ++
Sbjct: 21 IWVVITVYLIKKRSNRLIVGLACISLVLMYILSSAVGVMLFLIPLETKFPYYN---ISRY 77
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K+ I+VL G G ++ P + R+ RLYK + T+I +GG
Sbjct: 78 DKELPIVVL-GGGINYFGEKGEGKLNPI--TLQRLVTGYRLYKEVE-----TTLIFTGGQ 129
Query: 123 PQKH-GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILV 179
H G +E+ V L E G+ ++ + LE ++ +T++N + ++ G + + LV
Sbjct: 130 GIGHSGPSEADVAGEFLRELGINQEALVLENRARNTYENGLYVRDYLEQRNGLDRGVYLV 189
Query: 180 SSAYHLKRSQLYFQHFGINT----KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+SA HL R+ F+ + +D+ + P +N T A+ E+IG+L
Sbjct: 190 TSAVHLPRAVGVFRRLNLKVVPVPAGYFADHTQGWLDFFPARSNLNATLAAIHEWIGLLW 249
Query: 236 AYYRG 240
RG
Sbjct: 250 YKVRG 254
>gi|217976941|ref|YP_002361088.1| protein of unknown function DUF218 [Methylocella silvestris BL2]
gi|217502317|gb|ACK49726.1| protein of unknown function DUF218 [Methylocella silvestris BL2]
Length = 264
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
S + S G+ + + ES L+ GV D ++ E++S +T++NA F+
Sbjct: 116 SKRYPSARLVFTGGSGNLVEQTIVESTGVKKFWLDMGVPPDRMEFESRSRNTWENALFTR 175
Query: 166 SMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN---------TKASCSD--YLNAYYSII 214
+++ G+ +LV+SA+H+ RS F+ G + T SD +L + +
Sbjct: 176 DLLRPKPGETWLLVTSAWHMPRSMGIFRRLGFDVIAYPVAYRTSGDSSDWSFLRPAFERV 235
Query: 215 PLSANFYLTELALKEYIGIL 234
PL LA +E+IG+L
Sbjct: 236 PLVV------LAFREWIGLL 249
>gi|229072307|ref|ZP_04205512.1| hypothetical protein bcere0025_44700 [Bacillus cereus F65185]
gi|229082056|ref|ZP_04214544.1| hypothetical protein bcere0023_46830 [Bacillus cereus Rock4-2]
gi|228701281|gb|EEL53779.1| hypothetical protein bcere0023_46830 [Bacillus cereus Rock4-2]
gi|228710844|gb|EEL62814.1| hypothetical protein bcere0025_44700 [Bacillus cereus F65185]
Length = 345
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 109/242 (45%), Gaps = 39/242 (16%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC--TI 116
+++ + I++LG+G +P + A RI + Y KQ +++ TI
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY------------WKQAAVNTPPTI 206
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK 174
I SGG GL E+ N +E G+ + E +S++T+QN FS ++ ++ +GK
Sbjct: 207 IFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGK 266
Query: 175 -NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
I ++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I
Sbjct: 267 YKSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAI 315
Query: 234 LI 235
++
Sbjct: 316 VV 317
>gi|228955081|ref|ZP_04117096.1| hypothetical protein bthur0006_44460 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228804591|gb|EEM51195.1| hypothetical protein bthur0006_44460 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 345
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 109/242 (45%), Gaps = 39/242 (16%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC--TI 116
+++ + I++LG+G +P + A RI + Y KQ +++ TI
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY------------WKQAAVNTPPTI 206
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK 174
I SGG GL E+ N +E G+ + E +S++T+QN FS ++ ++ +GK
Sbjct: 207 IFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGK 266
Query: 175 -NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
I ++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I
Sbjct: 267 YKSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAI 315
Query: 234 LI 235
++
Sbjct: 316 VV 317
>gi|20808561|ref|NP_623732.1| hypothetical protein TTE2177 [Thermoanaerobacter tengcongensis MB4]
gi|20517188|gb|AAM25336.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
MB4]
Length = 192
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 13/142 (9%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ + KK IIVL G + P+ P F+ R+ E ++LYK II
Sbjct: 31 FTEKPKKSDAIIVL---GCAVYGDAPS----PFFKE--RLEEALKLYK----EGYGRYII 77
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGG ++E+ LE GV +I L+ +S T++N FS +++ K I
Sbjct: 78 ISGGKGPGESISEAEAGKRYFLEKGVASKNILLDNKSFSTYENLLFSKEIMEKNSLKTAI 137
Query: 178 LVSSAYHLKRSQLYFQHFGINT 199
+VS+ +HLKR+ + + GI+
Sbjct: 138 IVSNKFHLKRASVIAKRIGIDA 159
>gi|324328702|gb|ADY23962.1| hypothetical protein YBT020_23670 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 344
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 32/196 (16%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A SRI + +
Sbjct: 148 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLA----------SRIHKAID 191
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
Y + TII SGG GL E+ +E G+ + E +S++T+QN
Sbjct: 192 FYWKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNML 251
Query: 163 FSSSMIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
FS ++ ++ +GK N I ++ +HL R+ +Y + G+N++ S +A
Sbjct: 252 FSKEIMDSLKPEGKYNSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAF 300
Query: 220 FYLTELALKEYIGILI 235
+Y ++EY+ I++
Sbjct: 301 YYWPNAMIREYVAIVV 316
>gi|229153006|ref|ZP_04281187.1| hypothetical protein bcere0011_45370 [Bacillus cereus m1550]
gi|228630426|gb|EEK87074.1| hypothetical protein bcere0011_45370 [Bacillus cereus m1550]
Length = 345
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 109/242 (45%), Gaps = 39/242 (16%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC--TI 116
+++ + I++LG+G +P + A RI + Y KQ +++ TI
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY------------WKQAAVNTPPTI 206
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK 174
I SGG GL E+ N +E G+ + E +S++T+QN FS ++ ++ +GK
Sbjct: 207 IFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGK 266
Query: 175 -NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
I ++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I
Sbjct: 267 YKSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAI 315
Query: 234 LI 235
++
Sbjct: 316 VV 317
>gi|217964896|ref|YP_002350574.1| integral membrane protein [Listeria monocytogenes HCC23]
gi|217334166|gb|ACK39960.1| integral membrane protein [Listeria monocytogenes HCC23]
gi|307570545|emb|CAR83724.1| membrane protein, putative [Listeria monocytogenes L99]
Length = 344
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIII 118
P++ +D +++LG+G I R+ P S R+ + Y K + T I+
Sbjct: 159 PRYNQD--FLIVLGSGL-----IGGDRVPPLLAS--RLNRAIAFYEKQYSKTGKRATFIV 209
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNII 177
SGG ++E+ + L+ G++ I +E QS++T QN QFS + M M N +
Sbjct: 210 SGGQGANETVSEAQAMRDYLISKGIDETFIIMEDQSVNTLQNMQFSKAKMDAIMPDYNSL 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ LY + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 270 FSTNNFHLFRAGLYARKAGLKSQGIGAK-----------TALYYMPNALIREFIAITVMY 318
Query: 238 YR 239
+
Sbjct: 319 KK 320
>gi|228923560|ref|ZP_04086840.1| hypothetical protein bthur0011_45360 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228836029|gb|EEM81390.1| hypothetical protein bthur0011_45360 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 283
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 36/192 (18%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
+ + RP +++ + I++LG+G +P + A RI + Y K
Sbjct: 93 YQFNRP------RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY------------WK 134
Query: 109 QHSMHC--TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS 166
Q +++ TII SGG GL E+ N +E G+ + E +S++T+QN FS
Sbjct: 135 QAAVNTPPTIIFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKE 194
Query: 167 MIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLT 223
++ ++ +GK I ++ +HL R+ +Y + G+N++ S +A +Y
Sbjct: 195 IMDSLKPEGKYKSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWP 243
Query: 224 ELALKEYIGILI 235
++EY+ I++
Sbjct: 244 NAMIREYVAIVV 255
>gi|313624306|gb|EFR94349.1| integral membrane protein [Listeria innocua FSL J1-023]
Length = 344
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 24/210 (11%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+ L +F+G+ + F YQ P++ +D +++LG+G I R+ P
Sbjct: 131 VFLMAFVGYFSFLFLSFLLSTFLYQFNF--PRYNQD--FLIVLGSGL-----IGGDRVPP 181
Query: 90 SFQSYSRIFETMRLY-KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
S R+ + Y K + T I+SGG ++E+ + L+ G++ + I
Sbjct: 182 LLAS--RLNRAIAFYEKQYDKKGKRATFIVSGGQGANETVSEAKAMRDYLISKGIDENFI 239
Query: 149 KLETQSLDTFQNAQFS-SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
+E +S++T QN QFS + M M N + ++ +HL R+ LY + G+ ++ +
Sbjct: 240 IMEDKSVNTLQNMQFSKAKMDAIMPTYNSLFSTNNFHLFRAGLYARKAGLKSQGIGAK-- 297
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAY 237
+A +Y+ ++E+I I + Y
Sbjct: 298 ---------TALYYMPNALIREFIAITVMY 318
>gi|290893441|ref|ZP_06556425.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|290556942|gb|EFD90472.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
Length = 344
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIII 118
P++ +D +++LG+G I R+ P S R+ + Y K + T I+
Sbjct: 159 PRYNQD--FLIVLGSGL-----IGGDRVPPLLAS--RLNRAIAFYEKQYSKTGKRATFIV 209
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNII 177
SGG ++E+ + L+ G++ I +E QS++T QN QFS + M M N +
Sbjct: 210 SGGQGANETVSEAQAMRDYLISKGIDETFIIMEDQSVNTLQNMQFSKAKMDAIMPDYNSL 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ LY + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 270 FSTNNFHLFRAGLYARKAGLKSQGIGAK-----------TALYYMPNALIREFIAITVMY 318
Query: 238 YR 239
+
Sbjct: 319 KK 320
>gi|16800072|ref|NP_470340.1| hypothetical protein lin1003 [Listeria innocua Clip11262]
gi|16413462|emb|CAC96234.1| lin1003 [Listeria innocua Clip11262]
gi|313619596|gb|EFR91250.1| integral membrane protein [Listeria innocua FSL S4-378]
Length = 344
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIII 118
P++ +D +++LG+G I R+ P S R+ + Y K + T I+
Sbjct: 159 PRYNQD--FLIVLGSGL-----IDGDRVPPLLAS--RLNRAIAFYEKQYDKKGKRATFIV 209
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNII 177
SGG ++E+ + L+ G++ + I +E +S++T QN QFS + M M N +
Sbjct: 210 SGGQGANETVSEARAMRDYLISKGIDENFIIMEDKSVNTLQNMQFSKAKMDAIMPTYNSL 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ LY + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 270 FSTNNFHLFRAGLYARKAGLKSQGIGAK-----------TALYYMPNALIREFIAITVMY 318
>gi|228910647|ref|ZP_04074458.1| hypothetical protein bthur0013_47910 [Bacillus thuringiensis IBL
200]
gi|228848915|gb|EEM93758.1| hypothetical protein bthur0013_47910 [Bacillus thuringiensis IBL
200]
Length = 283
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 36/192 (18%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
+ + RP +++ + I++LG+G +P + A RI + Y K
Sbjct: 93 YQFNRP------RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY------------WK 134
Query: 109 QHSMHC--TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS 166
Q +++ TII SGG GL E+ N +E G+ + E +S++T+QN FS
Sbjct: 135 QAAVNTPPTIIFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKE 194
Query: 167 MIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLT 223
++ ++ +GK I ++ +HL R+ +Y + G+N++ S +A +Y
Sbjct: 195 IMDSLKPEGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWP 243
Query: 224 ELALKEYIGILI 235
++EY+ I++
Sbjct: 244 NAMIREYVAIVV 255
>gi|228903313|ref|ZP_04067444.1| hypothetical protein bthur0014_44780 [Bacillus thuringiensis IBL
4222]
gi|228967916|ref|ZP_04128927.1| hypothetical protein bthur0004_47040 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228791783|gb|EEM39374.1| hypothetical protein bthur0004_47040 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228856274|gb|EEN00803.1| hypothetical protein bthur0014_44780 [Bacillus thuringiensis IBL
4222]
Length = 283
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 36/192 (18%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
+ + RP +++ + I++LG+G +P + A RI + Y K
Sbjct: 93 YQFNRP------RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY------------WK 134
Query: 109 QHSMHC--TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS 166
Q +++ TII SGG GL E+ N +E G+ + E +S++T+QN FS
Sbjct: 135 QAAVNTPPTIIFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKE 194
Query: 167 MIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLT 223
++ ++ +GK I ++ +HL R+ +Y + G+N++ S +A +Y
Sbjct: 195 IMDSLKTEGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWP 243
Query: 224 ELALKEYIGILI 235
++EY+ I++
Sbjct: 244 NAMIREYVAIVV 255
>gi|153832463|ref|ZP_01985130.1| integral membrane protein [Vibrio harveyi HY01]
gi|148871258|gb|EDL70130.1| integral membrane protein [Vibrio harveyi HY01]
Length = 268
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 35/232 (15%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTII 79
CF++LFSF+G + + T LL L+ Y+ L G + +++LGNG +
Sbjct: 38 GCFVVLFSFVGIFLVAFQPVSTKLLMPLEREYKAFL-----PVSGTVDYVMVLGNGHVVD 92
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIISG--GDPQKHGLAESIVYN 135
IP P+ Q SR MRL + + M+ +I+SG G + ++ + +
Sbjct: 93 NEIP-----PTSQ-LSRT-ALMRLTEGIRILRMYPGAKLILSGYAGGSE---ISHARMMA 142
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
N L GV + DI L + DT++ A+ +++ +K K+I+LV+SA H+KR+ F
Sbjct: 143 NVALSLGVAKSDIILLEDAKDTWEEARQAAAFVKQ---KDIVLVTSASHMKRALYEFNAA 199
Query: 196 GINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
GI + ++++ + P + TEL EY+G L R N
Sbjct: 200 GIKPIPAPTNFMAIDDIEQPWQKYAPKARYLEQTELYWHEYLGGLWQKLRDN 251
>gi|315635988|ref|ZP_07891248.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315479709|gb|EFU70382.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 248
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 32/230 (13%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
KIF + F L F+ + I +++ L+ +Y P L + KD I++LGNG
Sbjct: 38 KIFLVLGF-LWFALLSNQTISNMIISPLENAY--PALK-ETPKDIKYILVLGNGHKTNDN 93
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG---GDPQKHGLAESIVYNNKL 138
P I E + + +R+ E +R YK+ + + +I+SG D H + KL
Sbjct: 94 FP-ITSELNTTAINRLIEGIRHYKNLE----NSKLIVSGYSFDDVNSHAQMQK-----KL 143
Query: 139 LES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
S GV DI DT + A + ++ N + +ILV++A H+KR+ + F+ +
Sbjct: 144 AISLGVNETDIITLDTPKDTKEEAIEAKKIVGNQK---LILVTTASHMKRAVMLFEKEDL 200
Query: 198 NTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
N AS S Y +Y++ + N ELA EY+G++ +Y +G
Sbjct: 201 NIIASPTNHKFFTSTYPTSYFN----ATNIKKVELAFHEYLGMVYSYVKG 246
>gi|228961075|ref|ZP_04122702.1| hypothetical protein bthur0005_45260 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228798620|gb|EEM45606.1| hypothetical protein bthur0005_45260 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 345
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 36/198 (18%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A RI + Y
Sbjct: 149 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY-------- 194
Query: 103 LYKSCKQHSMHC--TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
KQ +++ TII SGG GL E+ N +E G+ + E +S++T+QN
Sbjct: 195 ----WKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQN 250
Query: 161 AQFSSSMIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
FS ++ ++ +GK I ++ +HL R+ +Y + G+N++ S +
Sbjct: 251 MLFSKEIMDSLKPEGKYKSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------T 299
Query: 218 ANFYLTELALKEYIGILI 235
A +Y ++EY+ I++
Sbjct: 300 AFYYWPNAMIREYVAIVV 317
>gi|116492028|ref|YP_803763.1| hypothetical protein PEPE_0220 [Pediococcus pentosaceus ATCC 25745]
gi|116102178|gb|ABJ67321.1| hypothetical protein PEPE_0220 [Pediococcus pentosaceus ATCC 25745]
Length = 339
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 32/184 (17%)
Query: 63 KKDGNIIVLLGNGT---TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K + + I++LG G T+ P + R++ + + Y R + I++S
Sbjct: 161 KGNVDYIIVLGAGVRSETVTPLLKG-RLDKALEYYRR-------------QNGAVKIVVS 206
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI----KNMQGKN 175
GG ++E+ L V D I LE QS TF+N QFS I + Q
Sbjct: 207 GGQGPDEPVSEAFAMAKYLRNQSVPEDKIILEDQSTTTFENMQFSKQKIEADWQGTQPPQ 266
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
II ++ YH+ R +Y + G+N S ++ ++L ++EYI +L+
Sbjct: 267 IIFATNNYHVLRGVIYARKAGLNANGVGSP-----------TSFYFLPSALIREYIALLV 315
Query: 236 AYYR 239
Y +
Sbjct: 316 IYKK 319
>gi|157736806|ref|YP_001489489.1| hypothetical protein Abu_0553 [Arcobacter butzleri RM4018]
gi|157698660|gb|ABV66820.1| conserved hypothetical protein (DUF218 domain protein) [Arcobacter
butzleri RM4018]
Length = 248
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 40/234 (17%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
KIF + F L F+ + I +++ L+ +Y P L + KD I++LGNG
Sbjct: 38 KIFLVLGF-LWFALLSNQTISNMIISPLENAY--PALK-ETPKDIKYILVLGNGHKTNDN 93
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG---GDPQKHG-----LAESIV 133
P I E + + +R+ E +R YK+ + + +I+SG D H LA S+
Sbjct: 94 FP-ITSELNTTAINRLIEGIRHYKNLE----NSKLIVSGYSFDDVNSHAQMQKKLAISLG 148
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
N E D I L+T DT + A + ++ N + +ILV++A H+KR+ + F+
Sbjct: 149 VN--------EADIITLDTPK-DTKEEAIEAKKIVGNQK---LILVTTASHMKRAVMLFE 196
Query: 194 HFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+N AS S Y +Y++ + N ELA EY+G++ +Y +G
Sbjct: 197 KEDLNIIASPTNHKFFTSTYPTSYFN----ATNIKKVELAFHEYLGMVYSYVKG 246
>gi|218231692|ref|YP_002369609.1| hypothetical protein BCB4264_A4924 [Bacillus cereus B4264]
gi|218159649|gb|ACK59641.1| conserved domain protein [Bacillus cereus B4264]
Length = 345
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 36/198 (18%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A RI + Y
Sbjct: 149 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY-------- 194
Query: 103 LYKSCKQHSMHC--TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
KQ +++ TII SGG GL E+ N +E G+ + E +S++T+QN
Sbjct: 195 ----WKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQN 250
Query: 161 AQFSSSMIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
FS ++ ++ +GK I ++ +HL R+ +Y + G+N++ S +
Sbjct: 251 MLFSKEIMDSLKPEGKYKSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------T 299
Query: 218 ANFYLTELALKEYIGILI 235
A +Y ++EY+ I++
Sbjct: 300 AFYYWPNAMIREYVAIVV 317
>gi|75758871|ref|ZP_00738983.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74493637|gb|EAO56741.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 351
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 36/198 (18%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A RI + Y
Sbjct: 155 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY-------- 200
Query: 103 LYKSCKQHSMHC--TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
KQ +++ TII SGG GL E+ N +E G+ + E +S++T+QN
Sbjct: 201 ----WKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQN 256
Query: 161 AQFSSSMIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
FS ++ ++ +GK I ++ +HL R+ +Y + G+N++ S +
Sbjct: 257 MLFSKEIMDSLKTEGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------T 305
Query: 218 ANFYLTELALKEYIGILI 235
A +Y ++EY+ I++
Sbjct: 306 AFYYWPNAMIREYVAIVV 323
>gi|229105438|ref|ZP_04236081.1| hypothetical protein bcere0019_45700 [Bacillus cereus Rock3-28]
gi|228677994|gb|EEL32228.1| hypothetical protein bcere0019_45700 [Bacillus cereus Rock3-28]
Length = 345
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 36/198 (18%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A RI + Y
Sbjct: 149 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY-------- 194
Query: 103 LYKSCKQHSMHC--TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
KQ +++ TII SGG GL E+ N +E G+ E +S++T+QN
Sbjct: 195 ----WKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQNYAVEKGIPLKHTVQENRSVNTYQN 250
Query: 161 AQFSSSMIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
FS ++ ++ +GK I ++ +HL R+ +Y + G+N++ S +
Sbjct: 251 MSFSKEIMDSLKPEGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------T 299
Query: 218 ANFYLTELALKEYIGILI 235
A +Y ++EY+ I++
Sbjct: 300 AFYYWPNAMIREYVAIVV 317
>gi|332968539|gb|EGK07600.1| protein of hypothetical function DUF218 [Kingella kingae ATCC
23330]
Length = 207
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
++Y RP P + + V+LG P R RI + LY++ +
Sbjct: 34 YAYSRPQPLPD---EADAAVVLGAAAWGNKPSPVFR--------ERINHALTLYQTGRVK 82
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
II +GG P+ E+ V ++ G+ DI ET+S DTFQN + ++K
Sbjct: 83 K----IIFTGGTPKAGFATEAEVARQYAIKQGIADQDIVFETRSKDTFQNLANTRFLMKK 138
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKAS---CSDYLNAYY 211
++I+VS YH+ R+ Q +N AS S Y NA +
Sbjct: 139 HHLNSVIIVSDPYHMARAMNMAQDLQLNAYASHTPTSRYNNARF 182
>gi|30022866|ref|NP_834497.1| hypothetical protein BC4795 [Bacillus cereus ATCC 14579]
gi|229130080|ref|ZP_04259042.1| hypothetical protein bcere0015_45180 [Bacillus cereus BDRD-Cer4]
gi|29898425|gb|AAP11698.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579]
gi|228653397|gb|EEL09273.1| hypothetical protein bcere0015_45180 [Bacillus cereus BDRD-Cer4]
Length = 345
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 110/242 (45%), Gaps = 39/242 (16%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISIYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC--TI 116
+++ + I++LG+G +P + A RI + Y KQ +++ TI
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY------------WKQAAVNTPPTI 206
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK 174
I SGG GL E+ N +E G+ + E +S++T+QN FS ++ ++ +GK
Sbjct: 207 IFSGGQGPDEGLPEAEAMQNYAVEKGIPIEHTVQENRSVNTYQNMLFSKEIMDSLKPEGK 266
Query: 175 -NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
I ++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I
Sbjct: 267 YKSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAI 315
Query: 234 LI 235
++
Sbjct: 316 VV 317
>gi|240139755|ref|YP_002964232.1| hypothetical protein MexAM1_META1p3209 [Methylobacterium extorquens
AM1]
gi|240009729|gb|ACS40955.1| conserved hypothetical protein, DUF218; putative membrane protein
precursor [Methylobacterium extorquens AM1]
Length = 265
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 113 HCTIIISGG--DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
++ SGG ++ ++E+ + + GV R+ + LE QS +T +NA FS+ M++
Sbjct: 122 QARLVFSGGAGSTREDAVSEAEIVSRYADTLGVPRNRLILEQQSRNTHENAVFSARMVQP 181
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLT-----EL 225
G+ +LV+SA+H+ RS F+ G + A DY + A+F T ++
Sbjct: 182 KPGERWLLVTSAWHMPRSMGCFRKAGFDVTAYPVDYRTNWPRDAYRLASFASTGLGELDI 241
Query: 226 ALKEYIGILIAY 237
+KE+IG +IAY
Sbjct: 242 GVKEWIG-MIAY 252
>gi|254562167|ref|YP_003069262.1| hypothetical protein METDI3773 [Methylobacterium extorquens DM4]
gi|254269445|emb|CAX25411.1| conserved hypothetical protein, DUF218; putative membrane protein
precursor [Methylobacterium extorquens DM4]
Length = 265
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 8/132 (6%)
Query: 113 HCTIIISGG--DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
++ SGG ++ ++E+ + + GV R+ + LE QS +T +NA FS+ M++
Sbjct: 122 QARLVFSGGAGSTREDAVSEAEIVSRYADTLGVPRNRLILEQQSRNTHENAVFSARMVQP 181
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTEL 225
G+ +LV+SA+H+ RS F+ G + A DY +AY S ++
Sbjct: 182 KPGERWLLVTSAWHMPRSMGCFRKAGFDVTAYPVDYRTNWPRDAYRLASFASTGLGELDI 241
Query: 226 ALKEYIGILIAY 237
+KE+IG +IAY
Sbjct: 242 GVKEWIG-MIAY 252
>gi|91977540|ref|YP_570199.1| hypothetical protein RPD_3072 [Rhodopseudomonas palustris BisB5]
gi|91683996|gb|ABE40298.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB5]
Length = 264
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 20/195 (10%)
Query: 60 PQWKKDG----NIIVLLGN-GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
P W+ +G IIVL G + + ++ I+ S + E R Y +
Sbjct: 70 PPWQFNGRAPDGIIVLGGAVDSEVSAARSSLEIDSSAERVVAALELARQYPQAR------ 123
Query: 115 TIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II SGG + +AE+ + L GV D + LE++S T +NA F+ ++
Sbjct: 124 -IIYSGGSGNLIANSVAEAPIAGELLARFGVAPDRVVLESKSRTTAENASFTRELVSPKP 182
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY--SIIP---LSANFYLTELAL 227
G+ +LV+SA+H+ RS F+ + +A D+ + + +P LS+ ++A+
Sbjct: 183 GEVWLLVTSAFHMPRSIEAFRAVEFDVQAYPVDWRTRGWRDAALPFDRLSSGLARMDVAV 242
Query: 228 KEYIGILIAYYRGNR 242
E+ G L+AY G +
Sbjct: 243 HEWAG-LLAYRLGGK 256
>gi|218899964|ref|YP_002448375.1| hypothetical protein BCG9842_B0316 [Bacillus cereus G9842]
gi|218541300|gb|ACK93694.1| conserved domain protein [Bacillus cereus G9842]
Length = 345
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 36/198 (18%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A RI + Y
Sbjct: 149 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY-------- 194
Query: 103 LYKSCKQHSMHC--TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
KQ +++ TII SGG GL E+ N +E G+ + E +S++T+QN
Sbjct: 195 ----WKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQN 250
Query: 161 AQFSSSMIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
FS ++ ++ +GK I ++ +HL R+ +Y + G+N++ S +
Sbjct: 251 MLFSKEIMDSLKTEGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------T 299
Query: 218 ANFYLTELALKEYIGILI 235
A +Y ++EY+ I++
Sbjct: 300 AFYYWPNAMIREYVAIVV 317
>gi|315221464|ref|ZP_07863385.1| integral membrane protein with DUF218 domain protein [Streptococcus
anginosus F0211]
gi|315189583|gb|EFU23277.1| integral membrane protein with DUF218 domain protein [Streptococcus
anginosus F0211]
Length = 333
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 89/180 (49%), Gaps = 28/180 (15%)
Query: 64 KDGNIIVLLGNGTT--IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + I++LG+G +P + A R+E Y K H+ H I++SGG
Sbjct: 159 KHPDYIIILGSGLIGDKVPPLLAQRLEKGKTMYE------------KFHN-HPKIVVSGG 205
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IILV 179
+ E+ L + G+ ++DI +E QS +T +N +FS +++ + KN ++V
Sbjct: 206 QGVDEPITEAEAMAQYLRQVGIPQEDIIIERQSTNTLENLRFSKAILDETREKNYRCLVV 265
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++++H R+ +Y + G+ ++ S +A ++L ++E +G+++ Y++
Sbjct: 266 TNSFHSLRAGIYMRKIGLKGRSIGSR-----------TAPYFLPSSWIRETLGLIVLYWK 314
>gi|294623043|ref|ZP_06701932.1| integral membrane protein [Enterococcus faecium U0317]
gi|291597599|gb|EFF28761.1| integral membrane protein [Enterococcus faecium U0317]
Length = 399
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG-- 73
L Q I +FF +L++ FI + L S+ P++ +D IV+LG
Sbjct: 177 LPQWINALFFCVPLILIYLFI-------VFYNFLTISFLYQFNRPRYNQD--FIVVLGAG 227
Query: 74 --NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAE 130
NG T+ P + RI + + Y++ + +++ I++ SGG + E
Sbjct: 228 LINGETVSPLLA-----------KRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPE 276
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGK-NIILVSSAYHLKRS 188
+I +E G+ DI +ET S T +N +S M + M+G I S+ YH+ R+
Sbjct: 277 AIAMKQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRA 336
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
LY + + + +A +YL L+EYI IL+
Sbjct: 337 GLYARQAKLKANGIGAK-----------TAFYYLPNAFLREYIAILM 372
>gi|262204353|ref|YP_003275561.1| hypothetical protein Gbro_4535 [Gordonia bronchialis DSM 43247]
gi|262087700|gb|ACY23668.1| protein of unknown function DUF218 [Gordonia bronchialis DSM 43247]
Length = 334
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
+ + +R KS + + I++SGG P+K G+ E+ L+++GV+ I E +
Sbjct: 156 AAELINRVRAGKSQAELTTSAPIVVSGGVPKK-GITEASAMQKWLVDNGVDASRITTEDK 214
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
S T NAQ +++++ ++IILV+S H++R+ F G+ AS + +
Sbjct: 215 SGSTVANAQNTAAILAGKGVRDIILVTSPSHIRRAAADFAATGLRVVASVTTGTDLSRYA 274
Query: 214 IPLS 217
PL+
Sbjct: 275 TPLT 278
>gi|254457969|ref|ZP_05071396.1| integral membrane protein [Campylobacterales bacterium GD 1]
gi|207085362|gb|EDZ62647.1| integral membrane protein [Campylobacterales bacterium GD 1]
Length = 243
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 27/239 (11%)
Query: 6 IFLIVSYWHLLCQ----SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+F + W +L + + K+ F LLF F + L+ L+ Y P+
Sbjct: 16 VFSLFVIWFILSKLKKYKLAKVSLSLAFGLLFMF-SYPPFSNYLISDLENQY------PK 68
Query: 62 WKKDGNI--IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ NI I +LGNG T P I S R E + +Y + + T
Sbjct: 69 YDYKHNIKYIHVLGNGHNGDETQPISSI-ISEAGTRRALEGIIIYNQTEGSKLIFTGF-- 125
Query: 120 GGDPQKHGLAESIVYNNKL-LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GGD +K +A+ N +L L GV+ +DI L ++ DT + A F+ ++ + + +L
Sbjct: 126 GGD-EKISVAK---MNKRLALALGVKEEDIILGEKAKDTQEEAYFTKELVGD---EPFVL 178
Query: 179 VSSAYHLKRSQLYFQHFGINT-KASCSDYLNAYYSII--PLSANFYLTELALKEYIGIL 234
V+SA H+ RS + F+ G+ A + Y + + S + P +FYL+++A+ EY+GIL
Sbjct: 179 VTSASHIPRSMMLFESIGLKPIAAPTAFYKDKFRSFLKLPTMGSFYLSQIAMHEYLGIL 237
>gi|257884113|ref|ZP_05663766.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
gi|257819951|gb|EEV47099.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
Length = 368
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG-- 73
L Q I +FF +L++ FI + L S+ P++ +D IV+LG
Sbjct: 146 LPQWINALFFCVPLILIYLFI-------VFYNFLTVSFLYQFNRPRYNQD--FIVVLGAG 196
Query: 74 --NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAE 130
NG T+ P + RI + + Y++ + +++ I++ SGG + E
Sbjct: 197 LINGETVSPLLA-----------KRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPE 245
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGK-NIILVSSAYHLKRS 188
+I +E G+ DI +ET S T +N +S M + M+G I S+ YH+ R+
Sbjct: 246 AIAMKQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRA 305
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
LY + + + +A +YL L+EYI IL+
Sbjct: 306 GLYARQAKLKANGIGAK-----------TAFYYLPNAFLREYIAILM 341
>gi|152977155|ref|YP_001376672.1| hypothetical protein Bcer98_3467 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152025907|gb|ABS23677.1| protein of unknown function DUF218 [Bacillus cytotoxicus NVH
391-98]
Length = 345
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 32/238 (13%)
Query: 2 LLSWIFL-IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L WI L I L + IF ++L+ FI + +L + + RP
Sbjct: 108 ILLWILLAIFDPASLFSSHFQPIFGAISLIILYFFIH---VLNFFTAYLLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K + + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --KYNQDFIIVLGSGLIRDKVPPLLA--------SRIHKAIDFYHKQAAVASPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G L E+ +E G+ + E +S++T+QN FS ++ +++ N I
Sbjct: 211 GQGPDENLPEAEAMQKYAVEQGIPIEHTVQENRSVNTYQNMLFSKQIMDSLKPDGNYNSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ LY + G+N++ S +A +Y ++EYI I++
Sbjct: 271 FATNNFHLFRAGLYAKQAGLNSQGIGSK-----------TAFYYWPNALIREYIAIVV 317
>gi|169628519|ref|YP_001702168.1| hypothetical protein MAB_1428 [Mycobacterium abscessus ATCC 19977]
gi|169240486|emb|CAM61514.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length = 188
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
++P ++++ + ++ + II++GG+PQ +G++E+ N L+ G D
Sbjct: 50 LKPDGSMRDKLYQRVATGRAIANMFPNSFIIVTGGNPQ-NGVSEADQMRNMLVGLGYPSD 108
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
I +E ++ T QNAQFS + K IILV+++ H +R+ F G N A+ S
Sbjct: 109 RIIVEPRANSTVQNAQFSVPLAKQAGASGIILVTNSTHQQRADRNFADAGGNVLATAS 166
>gi|294620208|ref|ZP_06699542.1| integral membrane protein [Enterococcus faecium E1679]
gi|314940170|ref|ZP_07847348.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133a04]
gi|314942413|ref|ZP_07849256.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133C]
gi|314952311|ref|ZP_07855322.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133A]
gi|314994246|ref|ZP_07859549.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133B]
gi|314997161|ref|ZP_07862147.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133a01]
gi|291593561|gb|EFF25101.1| integral membrane protein [Enterococcus faecium E1679]
gi|313588735|gb|EFR67580.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133a01]
gi|313591333|gb|EFR70178.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133B]
gi|313595570|gb|EFR74415.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133A]
gi|313598813|gb|EFR77658.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133C]
gi|313640609|gb|EFS05189.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133a04]
Length = 399
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG-- 73
L Q I +FF +L++ FI + L S+ P++ +D IV+LG
Sbjct: 177 LPQWINALFFCVPLILIYLFI-------VFYNFLTVSFLYQFNRPRYNQD--FIVVLGAG 227
Query: 74 --NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAE 130
NG T+ P + RI + + Y++ + +++ I++ SGG + E
Sbjct: 228 LINGETVSPLLA-----------KRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPE 276
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGK-NIILVSSAYHLKRS 188
+I +E G+ DI +ET S T +N +S M + M+G I S+ YH+ R+
Sbjct: 277 AIAMKQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRA 336
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
LY + + + +A +YL L+EYI IL+
Sbjct: 337 GLYARQAKLKANGIGAK-----------TAFYYLPNAFLREYIAILM 372
>gi|83748341|ref|ZP_00945365.1| Integral membrane protein [Ralstonia solanacearum UW551]
gi|207723927|ref|YP_002254325.1| hypothetical protein RSMK01443 [Ralstonia solanacearum MolK2]
gi|83724963|gb|EAP72117.1| Integral membrane protein [Ralstonia solanacearum UW551]
gi|206589134|emb|CAQ36096.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 265
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
++ +GG P+ G+ E+ + + + G +D +E +S T +NA FS+ M++ +
Sbjct: 132 VLATGGAPEGRGVPEAELMGRLVADLG--QDARWIEARSATTEENAAFSAPMLRAAGIQR 189
Query: 176 IILVSSAYHLKRSQLYFQHFG-INTKASCS-------DYLNAYYSIIPLSANFYLTELAL 227
I LV+ +H+ R++ YF+ G I T A C S++P + LT AL
Sbjct: 190 IYLVTHYWHMARARRYFEGQGLIVTPAPCGWGGELEERPAGGILSLLPRTDGLALTRSAL 249
Query: 228 KEYIGIL 234
+E +G L
Sbjct: 250 REALGQL 256
>gi|114321439|ref|YP_743122.1| hypothetical protein Mlg_2290 [Alkalilimnicola ehrlichii MLHE-1]
gi|114227833|gb|ABI57632.1| protein of unknown function DUF218 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 252
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 17/206 (8%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
W + LL L+ + P+ + + IV+LG+G + +P + + + R+
Sbjct: 53 WAPVADRLLAPLEQRHP-PVHDARDHPEAQAIVVLGSGYSPHLALP-VTAQLNDSGLVRL 110
Query: 98 FETMRLYKSCKQHSMHCTIIISGG-DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
E +RL++ +I+SGG P + +AE + + GV D + T+ D
Sbjct: 111 NEGIRLHRQRPA----LPLIVSGGARPDQAPIAEG--FRRAAIALGVADDRLLPLTEPRD 164
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI--- 213
T Q A + ++ +G ++LV+SA H+ R+Q +F G+N + + + +
Sbjct: 165 TAQEAYATREVLG--EGATVLLVTSASHIHRAQAHFHRAGLNPIPAPTRHKAGHVRPATP 222
Query: 214 ---IPLSANFYLTELALKEYIGILIA 236
IP + + +E AL EY+G+L A
Sbjct: 223 GYWIPSATHLRKSERALYEYMGLLAA 248
>gi|315302477|ref|ZP_07873325.1| integral membrane protein [Listeria ivanovii FSL F6-596]
gi|313629156|gb|EFR97441.1| integral membrane protein [Listeria ivanovii FSL F6-596]
Length = 344
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIII 118
P++ +D +++LG+G I R+ P S R+ + Y K + T I+
Sbjct: 159 PRYNQD--FLIVLGSGL-----IGGDRVSPLLAS--RLDRAISFYQKQLMKKGKRATFIV 209
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNII 177
SGG ++E+ L+ G++ I +E +S++T QN QFS M M N +
Sbjct: 210 SGGQGTNETISEAEAMRGYLISKGIDETFIIMENKSVNTLQNMQFSKKKMDVIMPDYNSL 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ LY + G+ ++ + +A +Y+ ++E+I I++ Y
Sbjct: 270 FSTNNFHLFRASLYARKAGLKSQGIGAK-----------TALYYMPNALIREFIAIIVMY 318
Query: 238 YR 239
+
Sbjct: 319 KK 320
>gi|156973875|ref|YP_001444782.1| hypothetical protein VIBHAR_01585 [Vibrio harveyi ATCC BAA-1116]
gi|156525469|gb|ABU70555.1| hypothetical protein VIBHAR_01585 [Vibrio harveyi ATCC BAA-1116]
Length = 268
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 35/232 (15%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTII 79
CF++LFSF+G + + T LL L+ Y+ L G + +++LGNG +
Sbjct: 38 GCFVVLFSFVGIFLVAFQPVSTKLLMPLEREYKAFL-----PVSGTVDYVMVLGNGHVVD 92
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIISG--GDPQKHGLAESIVYN 135
IP P+ Q SR MRL + + M+ +I+SG G + ++ + +
Sbjct: 93 NEIP-----PTSQ-LSRT-ALMRLTEGIRILRMYPGAKLILSGYAGGSE---ISHARMMA 142
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
N L GV + DI L + DT++ A+ +++ +K K+I+LV+SA H+KR+ F
Sbjct: 143 NVALSLGVAKSDIILLEDAKDTWEEARQAAAFVKQ---KDIVLVTSASHMKRALYEFNAA 199
Query: 196 GINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
GI + ++++ + P + TEL EY+G L R N
Sbjct: 200 GIKPIPAPTNFMAIDDIEQPWQKYAPKARYLEQTELYWYEYLGGLWQKLRDN 251
>gi|254719238|ref|ZP_05181049.1| hypothetical protein Bru83_06801 [Brucella sp. 83/13]
gi|265984234|ref|ZP_06096969.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306837987|ref|ZP_07470845.1| Hypothetical protein BROD_0794 [Brucella sp. NF 2653]
gi|264662826|gb|EEZ33087.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306406911|gb|EFM63132.1| Hypothetical protein BROD_0794 [Brucella sp. NF 2653]
Length = 264
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLET 152
RI ETMRL + I++SGG+ + E+ LL+ G D E
Sbjct: 107 DRIVETMRLARLYPD----AKILVSGGEGTFFEKSAREAETTRALLLDLGFSGDRYIFEG 162
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
+S +T +NA FS ++ + G+ +LV+SAYH+ R+ F+ G + A DY
Sbjct: 163 KSRNTVENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRE 222
Query: 213 IIPL---SANFYLTE--LALKEYIGILIAYYRGN 241
L S N L+ +AL+E+ G+ ++ G
Sbjct: 223 TFGLYLESPNDALSRFSMALREWTGLTAYWWTGR 256
>gi|207742828|ref|YP_002259220.1| hypothetical protein RSIPO_01011 [Ralstonia solanacearum IPO1609]
gi|206594222|emb|CAQ61149.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 243
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
++ +GG P+ G+ E+ + + + G +D +E +S T +NA FS+ M++ +
Sbjct: 110 VLATGGAPEGRGVPEAELMGRLVADLG--QDARWIEARSATTEENAAFSAPMLRAAGIQR 167
Query: 176 IILVSSAYHLKRSQLYFQHFG-INTKASCS-------DYLNAYYSIIPLSANFYLTELAL 227
I LV+ +H+ R++ YF+ G I T A C S++P + LT AL
Sbjct: 168 IYLVTHYWHMARARRYFEGQGLIVTPAPCGWGGELEERPAGGILSLLPRTDGLALTRSAL 227
Query: 228 KEYIGIL 234
+E +G L
Sbjct: 228 REALGQL 234
>gi|229093911|ref|ZP_04225003.1| hypothetical protein bcere0021_46320 [Bacillus cereus Rock3-42]
gi|228689472|gb|EEL43285.1| hypothetical protein bcere0021_46320 [Bacillus cereus Rock3-42]
Length = 298
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 35/232 (15%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
I+S L + IF + ++ FI + L + + + RP +++ +
Sbjct: 69 IISPASLFSSHLAPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP------RRNQDF 119
Query: 69 IVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
I++LG+G +P + A SRI + + Y + TII SGG
Sbjct: 120 IIVLGSGLINDKVPPLLA----------SRIHKAIDFYWKQAAVNTPPTIIFSGGQGPDE 169
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK-NIILVSSAY 183
GL E+ +E G+ + E +S++T+QN FS ++ ++ +GK I ++ +
Sbjct: 170 GLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSIFTTNNF 229
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 230 HLFRAGIYAKQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAIVV 270
>gi|218531176|ref|YP_002421992.1| hypothetical protein Mchl_3226 [Methylobacterium chloromethanicum
CM4]
gi|218523479|gb|ACK84064.1| protein of unknown function DUF218 [Methylobacterium
chloromethanicum CM4]
Length = 265
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 8/132 (6%)
Query: 113 HCTIIISGGD--PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
++ SGG ++ ++E+ + + GV R+ + LE QS +T +NA FS+ M++
Sbjct: 122 QARLVFSGGSGSTREDAVSEAEIVSRYADTLGVPRNRLILEQQSRNTHENAVFSARMVQP 181
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTEL 225
G+ +LV+SA+H+ RS F+ G + A DY +AY S ++
Sbjct: 182 KPGERWLLVTSAWHMPRSMGCFRKAGFDVTAYPVDYRTNWPRDAYRLASFASDGLGELDI 241
Query: 226 ALKEYIGILIAY 237
+KE+IG +IAY
Sbjct: 242 GVKEWIG-MIAY 252
>gi|227524764|ref|ZP_03954813.1| integral membrane protein [Lactobacillus hilgardii ATCC 8290]
gi|227088071|gb|EEI23383.1| integral membrane protein [Lactobacillus hilgardii ATCC 8290]
Length = 351
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 36/223 (16%)
Query: 25 FMSCFMLLFSF----IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
F++ F+ LF F W + ++++ +L F P++ KD I++LG+G +I
Sbjct: 133 FITMFLTLFIFYILLTVWNTMVSMIVYNLYF--------PKYDKD--YIIVLGSG--LID 180
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
R+ + RI + + Y K+ S H +I SGG + E + L
Sbjct: 181 GYKVGRLLGN-----RINKGIEFYHLQLKKTSKHAKLIFSGGQGGDEKIPEGVAMKKYAL 235
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---IILVSSAYHLKRSQLYFQHFG 196
+ GV D +E +S++T QN FS +IKN G++ I+ V++ +H R + G
Sbjct: 236 DQGVPETDTLVEDKSINTRQNLIFSDRIIKNDSGRDDSKIVFVTNNFHTLRGGILAGKLG 295
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
I + + +YL ++EY+ + + + R
Sbjct: 296 IPATGIGAK-----------TPFYYLPNAVIREYLALFVMHKR 327
>gi|229141535|ref|ZP_04270069.1| hypothetical protein bcere0013_46290 [Bacillus cereus BDRD-ST26]
gi|228641935|gb|EEK98232.1| hypothetical protein bcere0013_46290 [Bacillus cereus BDRD-ST26]
Length = 277
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 106/240 (44%), Gaps = 35/240 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L +FL +S + IF + ++ FI + L + + + RP
Sbjct: 40 ILFCILFLFISPASFFSSHFQPIFAGISLITVYFFIH---LSNFLSAYFLYQFNRP---- 92
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+++ + I++LG+G +P + A SRI + + Y + TII
Sbjct: 93 --RRNQDFIIVLGSGLINDKVPPLLA----------SRIHKAIDFYWKQATVNTPPTIIF 140
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GK-N 175
SGG GL E+ +E G+ + E +S++T+QN FS ++ +++ GK
Sbjct: 141 SGGQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPDGKYK 200
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 201 SIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAIIV 249
>gi|39936223|ref|NP_948499.1| hypothetical protein RPA3160 [Rhodopseudomonas palustris CGA009]
gi|39650078|emb|CAE28601.1| DUF218 [Rhodopseudomonas palustris CGA009]
Length = 264
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 90/195 (46%), Gaps = 20/195 (10%)
Query: 60 PQWKKDG----NIIVLLGN-GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
P W + G IIVL G + + A+ ++ S + + R Y +
Sbjct: 70 PPWHEAGRAPDGIIVLGGAIASELSAARNALEVDASAERVLAALDLARRYPKAR------ 123
Query: 115 TIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
I+ SGG + +AE+ + L G+ D + LE +S T +NA ++ +++
Sbjct: 124 -IVYSGGSGNLIQRSVAEAPLAGELLERFGLASDRLVLEDKSRTTAENAAYTRALVAPKP 182
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELAL 227
G+ +LV+SA+H+ RS + F+ G + D+ +A + L+A T++A+
Sbjct: 183 GELWLLVTSAFHMPRSIIAFRAAGFDVVPYPVDWRTRGSEDAARTFSTLAAGLARTDVAV 242
Query: 228 KEYIGILIAYYRGNR 242
E+ G L+AY G +
Sbjct: 243 HEWAG-LLAYRLGGK 256
>gi|229163803|ref|ZP_04291746.1| hypothetical protein bcere0009_45690 [Bacillus cereus R309803]
gi|228619623|gb|EEK76506.1| hypothetical protein bcere0009_45690 [Bacillus cereus R309803]
Length = 344
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 36/198 (18%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A RI + Y
Sbjct: 148 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY-------- 193
Query: 103 LYKSCKQHSMHC--TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
KQ +++ TII SGG GL E+ +E G+ + E +S++T+QN
Sbjct: 194 ----WKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQKYAIEKGIPLEHTVQENRSVNTYQN 249
Query: 161 AQFSSSMIKNMQGKN---IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
FS ++ +++ K I ++ +HL R+ +Y + G+N++ S +
Sbjct: 250 MSFSKEIMDSLKPKGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------T 298
Query: 218 ANFYLTELALKEYIGILI 235
A +Y ++EY+ I++
Sbjct: 299 AFYYWPNAMIREYVAIIV 316
>gi|196032709|ref|ZP_03100122.1| conserved domain protein [Bacillus cereus W]
gi|195994138|gb|EDX58093.1| conserved domain protein [Bacillus cereus W]
Length = 291
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 35/232 (15%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
I+S L + IF + ++ FI + L + + + RP +++ +
Sbjct: 62 IISPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP------RRNQDF 112
Query: 69 IVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
I++LG+G +P + A SRI + + Y + TII SGG
Sbjct: 113 IIVLGSGLINDKVPPLLA----------SRIHKAIDFYWKQAAVNTPPTIIFSGGQGPDE 162
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK-NIILVSSAY 183
GL E+ +E G+ + E +S++T+QN FS ++ ++ +GK I ++ +
Sbjct: 163 GLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSIFTTNNF 222
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 223 HLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAIVV 263
>gi|315281729|ref|ZP_07870291.1| integral membrane protein [Listeria marthii FSL S4-120]
gi|313614619|gb|EFR88201.1| integral membrane protein [Listeria marthii FSL S4-120]
Length = 356
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 87/182 (47%), Gaps = 22/182 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIII 118
P++ +D +++LG+G I R+ P S R+ ++ Y K + T I+
Sbjct: 171 PRYNQD--FLIVLGSGL-----IGGDRVPPLLAS--RLNRAIKFYDKQYAKKGKRATFIV 221
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNII 177
SGG ++E+ LL G++ + I +E +S++T QN +FS + M M N +
Sbjct: 222 SGGQGANETISEAEAMRGYLLNQGIDENFIIMEDKSVNTLQNMKFSKAKMDAIMPSYNSL 281
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 282 FSTNNFHLFRAGIYARKAGLKSQGIGAK-----------TALYYMPNALIREFIAITVMY 330
Query: 238 YR 239
+
Sbjct: 331 KK 332
>gi|170719815|ref|YP_001747503.1| hypothetical protein PputW619_0629 [Pseudomonas putida W619]
gi|169757818|gb|ACA71134.1| protein of unknown function DUF218 [Pseudomonas putida W619]
Length = 253
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 26/197 (13%)
Query: 56 PLLSPQWKK---DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
PL S W + + IV+LG G +PS + R+ RL K+
Sbjct: 67 PLASGDWARLAQRADAIVVLGAGRERGDPAWGGEDQPSATALERMRFAARLAKASG---- 122
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ-----SLDTFQNAQFSSSM 167
++ SGG +E+ + ++L R+D +E + S T++NAQFS+ +
Sbjct: 123 -LPVLTSGGLHYGTPPSEAQLMADRL------REDFAVEVKWKEEASRTTWENAQFSAQL 175
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS-----CSDYLNAYYSIIPLSANFYL 222
+K + ++LV+ A+H++RS+ F+ G + D+ + ++P S +
Sbjct: 176 LKPLGIGRVVLVTQAWHMQRSRWSFEQAGFEVIPAPMGFLGRDHARPFAGLLPESRAMWQ 235
Query: 223 TELALKEYIGILIAYYR 239
+ L E +G +A YR
Sbjct: 236 SGQLLNEAVG--LAGYR 250
>gi|108758987|ref|YP_633512.1| hypothetical protein MXAN_5362 [Myxococcus xanthus DK 1622]
gi|15076969|gb|AAK83000.1|AF285783_5 unknown [Myxococcus xanthus]
gi|108462867|gb|ABF88052.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 258
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 11/134 (8%)
Query: 116 IIISGG--DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+++SGG DP+ + E+ V +L + G+ R+ I E +S +T +NA S+ +I+
Sbjct: 123 VLLSGGSLDPRPEAVVEADVLLRQLQQWGIPRERIVTEGRSRNTRENAVESARIIQERGW 182
Query: 174 KNIILVSSAYHLKRSQLYFQHFG-------INTKASCSDYLNAYYSIIPLSANFYLTELA 226
K+++LV+SA H+ R+ F G ++++AS + S +P S L+ A
Sbjct: 183 KSLLLVTSAAHMPRAAGCFAAVGLRPDLLPVDSRASNTPLRR--MSWLPRSGALNLSTDA 240
Query: 227 LKEYIGILIAYYRG 240
L+E G + RG
Sbjct: 241 LRELAGRAVYRVRG 254
>gi|65322167|ref|ZP_00395126.1| COG1434: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
Length = 257
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 35/232 (15%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
I+S L + IF + ++ FI + L + + + RP +++ +
Sbjct: 28 IISPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP------RRNQDF 78
Query: 69 IVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
I++LG+G +P + A SRI + + Y + TII SGG
Sbjct: 79 IIVLGSGLINDKVPPLLA----------SRIHKAIDFYWKQAAVNTPPTIIFSGGQGPDE 128
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK-NIILVSSAY 183
GL E+ +E G+ + E +S++T+QN FS ++ ++ +GK I ++ +
Sbjct: 129 GLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSIFTTNNF 188
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 189 HLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAIVV 229
>gi|187778517|ref|ZP_02994990.1| hypothetical protein CLOSPO_02112 [Clostridium sporogenes ATCC
15579]
gi|187772142|gb|EDU35944.1| hypothetical protein CLOSPO_02112 [Clostridium sporogenes ATCC
15579]
Length = 181
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 6/109 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ E +RLY II+SG ++E+ L+E GV+++ I LE +S
Sbjct: 49 RLDEGLRLY----NEGYGKYIIVSGAKGPGENISEAEAMEKYLVEKGVDKNFIILEDKSK 104
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+T +N +FS +++ K+ I+VS+ YHLKR++L Q GI KAS S
Sbjct: 105 NTLENIKFSKKKMEDNNLKSSIIVSNKYHLKRAELLCQKEGI--KASYS 151
>gi|163802067|ref|ZP_02195963.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Vibrio sp. AND4]
gi|159174208|gb|EDP59016.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Vibrio sp. AND4]
Length = 268
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 35/232 (15%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTII 79
CF++LFSF+G + + T LL L+ Y+ L G+I +++LGNG +
Sbjct: 38 GCFVVLFSFVGIFLVAFQPVSTKLLMPLEREYKAFL-----PVSGSIDYVMVLGNGHVVD 92
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIISG--GDPQKHGLAESIVYN 135
IP P+ Q SR MRL + + M+ +I+SG G + ++ + +
Sbjct: 93 NEIP-----PTSQ-LSRT-ALMRLTEGIRILRMYPGAKLILSGYAGGSE---ISHARMMA 142
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
N L GV + DI L + DT++ A+ +++ +K K+I+LV+SA H+KR+ F
Sbjct: 143 NVALSLGVAKSDIILLEDAEDTWEEARQAAAFVKQ---KDIVLVTSASHMKRALYEFHAA 199
Query: 196 GINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
GI + ++++ ++ P + TEL E++G L R N
Sbjct: 200 GIKPIPAPTNFMAIDEIEQSWQKYAPKARYLEQTELYWYEFLGGLWQKLRDN 251
>gi|163852418|ref|YP_001640461.1| hypothetical protein Mext_3001 [Methylobacterium extorquens PA1]
gi|163664023|gb|ABY31390.1| protein of unknown function DUF218 [Methylobacterium extorquens
PA1]
Length = 278
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 8/132 (6%)
Query: 113 HCTIIISGG--DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
++ SGG ++ ++E+ + + GV R+ + LE QS +T +NA FS+ M++
Sbjct: 135 QARLVFSGGAGSTREDAVSEAEIVSRYADTLGVPRNRLILEQQSRNTHENAVFSARMVQP 194
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTEL 225
G+ +LV+SA+H+ RS F+ G + A DY +AY S ++
Sbjct: 195 KPGERWLLVTSAWHMPRSMGCFRKAGFDVTAYPVDYRTNWPRDAYRLASFASDGLGELDI 254
Query: 226 ALKEYIGILIAY 237
+KE+IG +IAY
Sbjct: 255 GVKEWIG-MIAY 265
>gi|229198964|ref|ZP_04325651.1| hypothetical protein bcere0001_44800 [Bacillus cereus m1293]
gi|228584510|gb|EEK42641.1| hypothetical protein bcere0001_44800 [Bacillus cereus m1293]
Length = 277
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 106/240 (44%), Gaps = 35/240 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L +FL +S + IF + ++ FI + L + + + RP
Sbjct: 40 ILFCILFLFISPASFFSSHFQPIFAGISLITVYFFIH---LSNFLSAYFLYQFNRP---- 92
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+++ + I++LG+G +P + A SRI + + Y + TII
Sbjct: 93 --RRNQDFIIVLGSGLINDKVPPLLA----------SRIHKAIDFYWKQAAVNTPPTIIF 140
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GK-N 175
SGG GL E+ +E G+ + E +S++T+QN FS ++ +++ GK
Sbjct: 141 SGGQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPDGKYK 200
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 201 SIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAIVV 249
>gi|229020045|ref|ZP_04176829.1| hypothetical protein bcere0030_45390 [Bacillus cereus AH1273]
gi|229026276|ref|ZP_04182635.1| hypothetical protein bcere0029_45540 [Bacillus cereus AH1272]
gi|228734992|gb|EEL85628.1| hypothetical protein bcere0029_45540 [Bacillus cereus AH1272]
gi|228741267|gb|EEL91481.1| hypothetical protein bcere0030_45390 [Bacillus cereus AH1273]
Length = 344
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 36/198 (18%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A RI + Y
Sbjct: 148 LTAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY-------- 193
Query: 103 LYKSCKQHSMHC--TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
KQ +++ TII SGG GL E+ +E G+ + E +S++T+QN
Sbjct: 194 ----WKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQN 249
Query: 161 AQFSSSMIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
FS ++ ++ +GK I ++ +HL R+ +Y + G+N++ S +
Sbjct: 250 MSFSKKIMDSLKPEGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------T 298
Query: 218 ANFYLTELALKEYIGILI 235
A +Y ++EY+ I++
Sbjct: 299 AFYYWPNAMIREYVAIVV 316
>gi|228929853|ref|ZP_04092868.1| hypothetical protein bthur0010_45360 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228948549|ref|ZP_04110829.1| hypothetical protein bthur0007_46750 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229124367|ref|ZP_04253555.1| hypothetical protein bcere0016_46510 [Bacillus cereus 95/8201]
gi|228659019|gb|EEL14671.1| hypothetical protein bcere0016_46510 [Bacillus cereus 95/8201]
gi|228811148|gb|EEM57489.1| hypothetical protein bthur0007_46750 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228829769|gb|EEM75391.1| hypothetical protein bthur0010_45360 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 298
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 35/232 (15%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
I+S L + IF + ++ FI + L + + + RP +++ +
Sbjct: 69 IISPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP------RRNQDF 119
Query: 69 IVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
I++LG+G +P + A SRI + + Y + TII SGG
Sbjct: 120 IIVLGSGLINDKVPPLLA----------SRIHKAIDFYWKQAAVNTPPTIIFSGGQGPDE 169
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK-NIILVSSAY 183
GL E+ +E G+ + E +S++T+QN FS ++ ++ +GK I ++ +
Sbjct: 170 GLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSIFTTNNF 229
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 230 HLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAIVV 270
>gi|52140703|ref|YP_086126.1| membrane spanning protein [Bacillus cereus E33L]
gi|51974172|gb|AAU15722.1| conserved hypothetical protein; possible membrane spanning protein
[Bacillus cereus E33L]
Length = 345
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A SRI + +
Sbjct: 149 LTAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLA----------SRIHKAID 192
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
Y + TII SGG GL E+ +E G+ + E +S++T+QN
Sbjct: 193 FYWKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMS 252
Query: 163 FSSSMIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
FS ++ ++ +GK I ++ +HL R+ +Y + G+N++ S +A
Sbjct: 253 FSKEIMDSLKPEGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAF 301
Query: 220 FYLTELALKEYIGILI 235
+Y ++EY+ I++
Sbjct: 302 YYWPNAMIREYVAIVV 317
>gi|229158416|ref|ZP_04286478.1| hypothetical protein bcere0010_45910 [Bacillus cereus ATCC 4342]
gi|228625023|gb|EEK81788.1| hypothetical protein bcere0010_45910 [Bacillus cereus ATCC 4342]
Length = 298
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A SRI + +
Sbjct: 102 LTAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLA----------SRIHKAID 145
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
Y + TII SGG GL E+ +E G+ + E +S++T+QN
Sbjct: 146 FYWKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMS 205
Query: 163 FSSSMIKNMQ--GK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
FS ++ +++ GK I ++ +HL R+ +Y + G+N++ S +A
Sbjct: 206 FSKDIMDSLKPDGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAF 254
Query: 220 FYLTELALKEYIGILI 235
+Y ++EY+ I++
Sbjct: 255 YYWPNAMIREYVAIVV 270
>gi|323439958|gb|EGA97673.1| hypothetical protein SAO11_1094 [Staphylococcus aureus O11]
Length = 322
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 83/180 (46%), Gaps = 28/180 (15%)
Query: 62 WKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ K+ +II++LG G T + + A R++ + Y +Q + II+S
Sbjct: 143 YNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIY-------------QQQASATKIIVS 189
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NII 177
G + E++ L+ GV++ DI +E+ S++T+ N +S +I N+ K I+
Sbjct: 190 GRQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHKAVKIV 249
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V+S +H+ R+ Q G++ S + + + +K+Y+G++ Y
Sbjct: 250 CVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQY 298
>gi|229062493|ref|ZP_04199806.1| hypothetical protein bcere0026_45600 [Bacillus cereus AH603]
gi|228716776|gb|EEL68467.1| hypothetical protein bcere0026_45600 [Bacillus cereus AH603]
Length = 344
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 36/198 (18%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A RI + Y
Sbjct: 148 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY-------- 193
Query: 103 LYKSCKQHSMHC--TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
KQ +++ TII SGG GL E+ +E G+ + E +S++T+QN
Sbjct: 194 ----WKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQKYAVEKGIPPEHTVQENRSVNTYQN 249
Query: 161 AQFSSSMIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
FS ++ ++ +GK I ++ +HL R+ +Y + G+N++ S +
Sbjct: 250 MSFSKEIMDSLKPEGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------T 298
Query: 218 ANFYLTELALKEYIGILI 235
A +Y ++EY+ I++
Sbjct: 299 AFYYWPNAMIREYVAIVV 316
>gi|257883084|ref|ZP_05662737.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
gi|257818742|gb|EEV46070.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
Length = 368
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG-- 73
L Q I +FF +L++ FI + L S+ P++ +D IV+LG
Sbjct: 146 LPQWINALFFCVPLILIYLFI-------VFYNFLTVSFLYQFNRPRYNQD--FIVVLGAG 196
Query: 74 --NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAE 130
NG T+ P + RI + + Y++ + +++ I++ SGG + E
Sbjct: 197 LINGETVSPLLA-----------KRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPE 245
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGK-NIILVSSAYHLKRS 188
+I +E G+ DI +ET S T +N +S M + M+G I S+ YH+ R+
Sbjct: 246 AIAMKQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRA 305
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
LY + KA+ A+Y YL L+EYI IL+
Sbjct: 306 GLY--AWQAKLKANGIGAKTAFY---------YLPNAFLREYIAILM 341
>gi|206978334|ref|ZP_03239209.1| conserved domain protein [Bacillus cereus H3081.97]
gi|217962290|ref|YP_002340860.1| hypothetical protein BCAH187_A4938 [Bacillus cereus AH187]
gi|222098272|ref|YP_002532329.1| hypothetical protein BCQ_4614 [Bacillus cereus Q1]
gi|206743465|gb|EDZ54897.1| conserved domain protein [Bacillus cereus H3081.97]
gi|217064139|gb|ACJ78389.1| conserved domain protein [Bacillus cereus AH187]
gi|221242330|gb|ACM15040.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 344
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 104/238 (43%), Gaps = 31/238 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L +FL +S + IF + ++ FI + L + + + RP
Sbjct: 107 ILFCILFLFISPASFFSSHFQPIFAGISLITVYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLLA--------SRIHKAIDFYWKQATVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GK-NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ GK I
Sbjct: 210 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPDGKYKSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAIIV 316
>gi|300769543|ref|ZP_07079429.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300492958|gb|EFK28140.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 361
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH-CTIII 118
P+ ++D I++LG G + R+ P RI +R Y+ ++ + H +I
Sbjct: 173 PRLRQD--YIIVLGAGL-----LDGDRVSPLLGQ--RIMRGLRFYQKQQRKTHHRAVMIF 223
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--I 176
SGG + E + G+ D ETQS T QN QFS +I KN
Sbjct: 224 SGGQGGDETVPEGQAMLEYAIAHGLPATDGWAETQSKTTLQNMQFSKQLIAQGPVKNPRT 283
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I V++ YH R+ ++ + G+ + +A F+L + ++EYI I +
Sbjct: 284 IFVTNNYHTFRAGMFAKQAGLKADGIGAR-----------TARFFLPDAIIREYIAIFV 331
>gi|254557746|ref|YP_003064163.1| integral membrane protein [Lactobacillus plantarum JDM1]
gi|308181833|ref|YP_003925961.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|254046673|gb|ACT63466.1| integral membrane protein [Lactobacillus plantarum JDM1]
gi|308047324|gb|ADN99867.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 361
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH-CTIII 118
P+ ++D I++LG G + R+ P RI +R Y+ ++ + H +I
Sbjct: 173 PRLRQD--YIIVLGAGL-----LDGDRVSPLLGQ--RIMRGLRFYQKQQRKTHHRAVMIF 223
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--I 176
SGG + E + G+ D ETQS T QN QFS +I KN
Sbjct: 224 SGGQGGDETVPEGQAMLEYAIAHGLPATDGWAETQSKTTLQNMQFSKQLIAQGPVKNPRT 283
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I V++ YH R+ ++ + G+ + +A F+L + ++EYI I +
Sbjct: 284 IFVTNNYHTFRAGMFAKQAGLKADGIGAR-----------TARFFLPDAIIREYIAIFV 331
>gi|227551940|ref|ZP_03981989.1| integral membrane protein [Enterococcus faecium TX1330]
gi|293378333|ref|ZP_06624502.1| putative membrane protein [Enterococcus faecium PC4.1]
gi|293571655|ref|ZP_06682676.1| integral membrane protein [Enterococcus faecium E980]
gi|227178941|gb|EEI59913.1| integral membrane protein [Enterococcus faecium TX1330]
gi|291608325|gb|EFF37626.1| integral membrane protein [Enterococcus faecium E980]
gi|292643197|gb|EFF61338.1| putative membrane protein [Enterococcus faecium PC4.1]
Length = 399
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG-- 73
L Q I +FF +L++ FI + L S+ P++ +D IV+LG
Sbjct: 177 LPQWINALFFCIPLILIYLFI-------VFYNFLTVSFLYQFNRPRYNQD--FIVVLGAG 227
Query: 74 --NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAE 130
NG T+ P + RI + + Y + + +++ I++ SGG + E
Sbjct: 228 LINGETVSPLLA-----------KRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPE 276
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGK-NIILVSSAYHLKRS 188
+I +E G+ DI +ET S T +N ++S M + M+G I S+ YH+ R+
Sbjct: 277 AIAMKQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRA 336
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
LY + + + +A +YL L+EYI IL+
Sbjct: 337 GLYARQAKLKANGIGAK-----------TAFYYLPNAFLREYIAILM 372
>gi|261209456|ref|ZP_05923819.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|289567586|ref|ZP_06447918.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
gi|260076584|gb|EEW64348.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|289160620|gb|EFD08588.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
Length = 349
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG-- 73
L Q I +FF +L++ FI + L S+ P++ +D IV+LG
Sbjct: 127 LPQWINALFFCVPLILIYLFI-------VFYNFLTVSFLYQFNRPRYNQD--FIVVLGAG 177
Query: 74 --NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAE 130
NG T+ P + RI + + Y++ + +++ I++ SGG + E
Sbjct: 178 LINGETVSPLLA-----------KRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPE 226
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGK-NIILVSSAYHLKRS 188
+I +E G+ DI +ET S T +N +S M + M+G I S+ YH+ R+
Sbjct: 227 AIAMKQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRA 286
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
LY + + + +A +YL L+EY+ IL+
Sbjct: 287 GLYARQAKLKANGIGAK-----------TAFYYLPNAFLREYLAILM 322
>gi|28379603|ref|NP_786495.1| integral membrane protein [Lactobacillus plantarum WCFS1]
gi|28272443|emb|CAD65367.1| integral membrane protein [Lactobacillus plantarum WCFS1]
Length = 361
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH-CTIII 118
P+ ++D I++LG G + R+ P RI +R Y+ ++ + H +I
Sbjct: 173 PRLRQD--YIIVLGAGL-----LDGDRVSPLLGQ--RIMRGLRFYQKQQRKTHHRAVMIF 223
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--I 176
SGG + E + G+ D ETQS T QN QFS +I KN
Sbjct: 224 SGGQGGDETVPEGQAMLEYAIAHGLPATDGWAETQSKTTLQNMQFSKQLIAQGPVKNPRT 283
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I V++ YH R+ ++ + G+ + +A F+L + ++EYI I +
Sbjct: 284 IFVTNNYHTFRAGMFAKQAGLKADGIGAR-----------TARFFLPDAIIREYIAIFV 331
>gi|257879975|ref|ZP_05659628.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|257893086|ref|ZP_05672739.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
gi|257814203|gb|EEV42961.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|257829465|gb|EEV56072.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
Length = 368
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG-- 73
L Q I +FF +L++ FI + L S+ P++ +D IV+LG
Sbjct: 146 LPQWINALFFCVPLILIYLFI-------VFYNFLTVSFLYQFNRPRYNQD--FIVVLGAG 196
Query: 74 --NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAE 130
NG T+ P + RI + + Y++ + +++ I++ SGG + E
Sbjct: 197 LINGETVSPLLA-----------KRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPE 245
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGK-NIILVSSAYHLKRS 188
+I +E G+ DI +ET S T +N +S M + M+G I S+ YH+ R+
Sbjct: 246 AIAMKQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRA 305
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
LY + + + +A +YL L+EY+ IL+
Sbjct: 306 GLYARQAKLKANGIGAK-----------TAFYYLPNAFLREYLAILM 341
>gi|69249391|ref|ZP_00604956.1| Protein of unknown function DUF218 [Enterococcus faecium DO]
gi|258614355|ref|ZP_05712125.1| hypothetical protein EfaeD_01478 [Enterococcus faecium DO]
gi|68194178|gb|EAN08708.1| Protein of unknown function DUF218 [Enterococcus faecium DO]
Length = 399
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG-- 73
L Q I +FF +L++ FI + L S+ P++ +D IV+LG
Sbjct: 177 LPQWINALFFCVPLILIYLFI-------VFYNFLTVSFLYQFNRPRYNQD--FIVVLGAG 227
Query: 74 --NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAE 130
NG T+ P + RI + + Y++ + +++ I++ SGG + E
Sbjct: 228 LINGETVSPLLA-----------KRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPE 276
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGK-NIILVSSAYHLKRS 188
+I +E G+ DI +ET S T +N +S M + M+G I S+ YH+ R+
Sbjct: 277 AIAMKQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRA 336
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
LY + + + +A +YL L+EY+ IL+
Sbjct: 337 GLYARQAKLKANGIGAK-----------TAFYYLPNAFLREYLAILM 372
>gi|227513619|ref|ZP_03943668.1| integral membrane protein [Lactobacillus buchneri ATCC 11577]
gi|227083135|gb|EEI18447.1| integral membrane protein [Lactobacillus buchneri ATCC 11577]
Length = 351
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 36/223 (16%)
Query: 25 FMSCFMLLFSF----IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
F++ F+ LF F W + ++++ +L F P++ KD I++LG+G +I
Sbjct: 133 FITMFLTLFIFYILLTVWNTMVSMIVYNLYF--------PKYDKD--YIIVLGSG--LID 180
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
R+ + RI + + Y K+ S H +I SGG + E + L
Sbjct: 181 GYKVGRLLGN-----RINKGIEFYHLQLKKTSKHAKLIFSGGQGGDEKIPEGVAMKKYAL 235
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---IILVSSAYHLKRSQLYFQHFG 196
+ GV D +E +S++T QN FS +IKN G++ I+ V++ +H R + G
Sbjct: 236 DQGVPETDTLVEDKSINTRQNLIFSDRIIKNDSGRDDSKIVFVTNNFHTLRGGILAGKLG 295
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
I + + +YL ++EY+ + + + R
Sbjct: 296 IPATEIGAK-----------TPFYYLPNAVIREYLALFVMHKR 327
>gi|30264869|ref|NP_847246.1| hypothetical protein BA_5055 [Bacillus anthracis str. Ames]
gi|47530355|ref|YP_021704.1| hypothetical protein GBAA_5055 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187685|ref|YP_030938.1| hypothetical protein BAS4694 [Bacillus anthracis str. Sterne]
gi|165869591|ref|ZP_02214249.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167633993|ref|ZP_02392316.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|167638097|ref|ZP_02396375.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|170685702|ref|ZP_02876925.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|170705528|ref|ZP_02895992.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|177651307|ref|ZP_02934138.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190567172|ref|ZP_03020087.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|227817596|ref|YP_002817605.1| hypothetical protein BAMEG_5089 [Bacillus anthracis str. CDC 684]
gi|229602236|ref|YP_002869074.1| hypothetical protein BAA_5066 [Bacillus anthracis str. A0248]
gi|254687608|ref|ZP_05151464.1| hypothetical protein BantC_27690 [Bacillus anthracis str.
CNEVA-9066]
gi|254725174|ref|ZP_05186957.1| hypothetical protein BantA1_22344 [Bacillus anthracis str. A1055]
gi|254736912|ref|ZP_05194618.1| hypothetical protein BantWNA_17226 [Bacillus anthracis str. Western
North America USA6153]
gi|254741947|ref|ZP_05199634.1| hypothetical protein BantKB_13153 [Bacillus anthracis str. Kruger
B]
gi|254754455|ref|ZP_05206490.1| hypothetical protein BantV_18392 [Bacillus anthracis str. Vollum]
gi|254757288|ref|ZP_05209315.1| hypothetical protein BantA9_03186 [Bacillus anthracis str.
Australia 94]
gi|30259544|gb|AAP28732.1| conserved domain protein [Bacillus anthracis str. Ames]
gi|47505503|gb|AAT34179.1| conserved domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49181612|gb|AAT56988.1| conserved domain protein [Bacillus anthracis str. Sterne]
gi|164714420|gb|EDR19939.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167513914|gb|EDR89282.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|167530794|gb|EDR93496.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|170129653|gb|EDS98516.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|170670166|gb|EDT20906.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|172083133|gb|EDT68195.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190561676|gb|EDV15646.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|227003708|gb|ACP13451.1| conserved domain protein [Bacillus anthracis str. CDC 684]
gi|229266644|gb|ACQ48281.1| conserved domain protein [Bacillus anthracis str. A0248]
Length = 345
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A SRI + +
Sbjct: 149 LTAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLA----------SRIHKAID 192
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
Y + TII SGG GL E+ +E G+ + E +S++T+QN
Sbjct: 193 FYWKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNML 252
Query: 163 FSSSMIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
FS ++ ++ +GK I ++ +HL R+ +Y + G+N++ S +A
Sbjct: 253 FSKEIMDSLKPEGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAF 301
Query: 220 FYLTELALKEYIGILI 235
+Y ++EY+ I++
Sbjct: 302 YYWPNAMIREYVAIVV 317
>gi|49481369|ref|YP_038846.1| hypothetical protein BT9727_4534 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49332925|gb|AAT63571.1| conserved hypothetical protein, possible membrane spanning protein
[Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 344
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A SRI + +
Sbjct: 148 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLA----------SRIHKAID 191
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
Y + TII SGG GL E+ +E G+ + E +S++T+QN
Sbjct: 192 FYWKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMS 251
Query: 163 FSSSMIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
FS ++ ++ +GK I ++ +HL R+ +Y + G+N++ S +A
Sbjct: 252 FSKEIMDSLKPEGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAF 300
Query: 220 FYLTELALKEYIGILI 235
+Y ++EY+ I++
Sbjct: 301 YYWPNAMIREYVAIVV 316
>gi|47565235|ref|ZP_00236278.1| hypothetical protein membrane Spanning protein [Bacillus cereus
G9241]
gi|47558021|gb|EAL16346.1| hypothetical protein membrane Spanning protein [Bacillus cereus
G9241]
Length = 333
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 36/198 (18%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A RI + Y
Sbjct: 137 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY-------- 182
Query: 103 LYKSCKQHSMHC--TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
KQ +++ TII SGG GL E+ +E G+ + E +S++T+QN
Sbjct: 183 ----WKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQN 238
Query: 161 AQFSSSMIKNMQ--GK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
FS ++ +++ GK I ++ +HL R+ +Y + G+N++ S +
Sbjct: 239 MSFSKEIMDSLKPNGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------T 287
Query: 218 ANFYLTELALKEYIGILI 235
A +Y ++EY+ I++
Sbjct: 288 AFYYWPNAMIREYVAIVV 305
>gi|309390074|gb|ADO77954.1| protein of unknown function DUF218 [Halanaerobium praevalens DSM
2228]
Length = 253
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 34/253 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFS-FIGWGIIPTILLKHLQFSYQRPLLS 59
++L+++FLI + + + IR + F L+F F+ + +L+ L+ +R L+
Sbjct: 20 IVLNFVFLIYLFKNKSSKLIR---LTAVFSLIFLIFLATAVGARVLVHPLENYAERNLVE 76
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K IV+LG G+ A + PS S R+ + L++S K +I S
Sbjct: 77 VSQKYP---IVVLGGGSNYYS---AKKTTPSTHSLQRLVKGYELHRSLK-----TPLIYS 125
Query: 120 GGDP-QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GG + ++E+ + L + G++ + ET++ TF+NA + IK Q K + L
Sbjct: 126 GGVAIGQQNISEADAASEFLQDLGMDLEFYFSETKAQTTFENAAYLRKWIKQHQVKKVYL 185
Query: 179 VSSAYHLKRSQLYFQ---------HFGI--NTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+SAYH+ RS F+ H G N K S DY + S L+AN AL
Sbjct: 186 FTSAYHMLRSMTVFKAQQIEVLPVHSGFIYNHKLSWLDY---FPSRGALNANL----TAL 238
Query: 228 KEYIGILIAYYRG 240
E+IG+ Y +G
Sbjct: 239 HEWIGLFWYYLKG 251
>gi|257886897|ref|ZP_05666550.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
gi|257895468|ref|ZP_05675121.1| conserved hypothetical protein [Enterococcus faecium Com12]
gi|257822951|gb|EEV49883.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
gi|257832033|gb|EEV58454.1| conserved hypothetical protein [Enterococcus faecium Com12]
Length = 368
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG-- 73
L Q I +FF +L++ FI + L S+ P++ +D IV+LG
Sbjct: 146 LPQWINALFFCIPLILIYLFI-------VFYNFLTVSFLYQFNRPRYNQD--FIVVLGAG 196
Query: 74 --NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAE 130
NG T+ P + RI + + Y + + +++ I++ SGG + E
Sbjct: 197 LINGETVSPLLA-----------KRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPE 245
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGK-NIILVSSAYHLKRS 188
+I +E G+ DI +ET S T +N ++S M + M+G I S+ YH+ R+
Sbjct: 246 AIAMKQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRA 305
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
LY + + + +A +YL L+EYI IL+
Sbjct: 306 GLYARQAKLKANGIGAK-----------TAFYYLPNAFLREYIAILM 341
>gi|110800807|ref|YP_695894.1| hypothetical protein CPF_1451 [Clostridium perfringens ATCC 13124]
gi|110675454|gb|ABG84441.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
Length = 257
Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
++ + I++SGG + E+ L+E+GV +D I LE ++ T++N +S +
Sbjct: 127 EKTGFNGEIVVSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKI 186
Query: 168 IKNMQGK-----NIILVSSAYHLKRSQLYFQHFGIN 198
I+N+ GK +I++V++ +H RS L + G N
Sbjct: 187 IENLSGKPIKDLDILIVTTDFHAMRSNLLAKRNGYN 222
>gi|228917456|ref|ZP_04081005.1| hypothetical protein bthur0012_46660 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228842128|gb|EEM87227.1| hypothetical protein bthur0012_46660 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 298
Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 35/232 (15%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
I+S L + IF + ++ FI + L + + + RP +++ +
Sbjct: 69 IISPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP------RRNQDF 119
Query: 69 IVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
I++LG+G +P + A SRI + + Y + TII SGG
Sbjct: 120 IIVLGSGLINDKVPPLLA----------SRIHKAIDFYWKQAAVNTPPTIIFSGGQGPDE 169
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GK-NIILVSSAY 183
GL E+ +E G+ + E +S++T+QN FS ++ +++ GK I ++ +
Sbjct: 170 GLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMLFSKEIMDSLKPNGKYKSIFTTNNF 229
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 230 HLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAIVV 270
>gi|222100068|ref|YP_002534636.1| hypothetical protein CTN_1094 [Thermotoga neapolitana DSM 4359]
gi|221572458|gb|ACM23270.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
Length = 252
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 27/202 (13%)
Query: 50 QFSYQRPL----LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM--RL 103
+F + RPL + P +IV+LG G +E + ++ + ++ R+
Sbjct: 66 EFLFLRPLEEDLIVPDGLPQNGVIVILGGG-----------VERNTKTGDSLSDSTLRRI 114
Query: 104 YKSCKQH-SMHCTIIISGGDPQKHGL-AESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
+ H I+++GG GL E+I+ L+ GV ++ +E +S +T++NA
Sbjct: 115 LTGFQVHRKTGLPILVTGG--SLSGLEPEAIIMKEYLVSLGVPEKNVLVENRSRNTYENA 172
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF---GINTKASCSDYLNAYYSIIPLSA 218
F+ ++I ++ I+LV+ + H++R+ F+ F + A C + +P +
Sbjct: 173 FFTKNLIGDVP---IVLVTDSIHMRRALYTFKKFFSEVVPYPAGCYFGTPEFVDFLPSAT 229
Query: 219 NFYLTELALKEYIGILIAYYRG 240
+FYL A+ E+IG++ RG
Sbjct: 230 SFYLNSRAIYEWIGLVWYNLRG 251
>gi|229175521|ref|ZP_04303031.1| hypothetical protein bcere0006_45990 [Bacillus cereus MM3]
gi|228607917|gb|EEK65229.1| hypothetical protein bcere0006_45990 [Bacillus cereus MM3]
Length = 344
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A SRI + +
Sbjct: 148 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLA----------SRIHKAID 191
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
Y + TII SGG GL E+ +E G+ + E +S++T+QN
Sbjct: 192 FYWKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMS 251
Query: 163 FSSSMIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
FS ++ ++ +GK I ++ +HL R+ +Y + G+N++ S +A
Sbjct: 252 FSKEIMDSLKPEGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAF 300
Query: 220 FYLTELALKEYIGILI 235
+Y ++EY+ I++
Sbjct: 301 YYWPNAMIREYVAIVV 316
>gi|229193086|ref|ZP_04320041.1| hypothetical protein bcere0002_47360 [Bacillus cereus ATCC 10876]
gi|228590350|gb|EEK48214.1| hypothetical protein bcere0002_47360 [Bacillus cereus ATCC 10876]
Length = 345
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 39/242 (16%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT--I 116
+++ + I++LG+G +P + A RI + Y KQ +++ I
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY------------WKQAAVNTPPII 206
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK 174
I SGG GL E+ N +E G+ + E +S++T+QN FS ++ ++ +GK
Sbjct: 207 IFSGGQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGK 266
Query: 175 -NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
I ++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I
Sbjct: 267 YKSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAI 315
Query: 234 LI 235
++
Sbjct: 316 VV 317
>gi|229048503|ref|ZP_04194066.1| hypothetical protein bcere0027_44660 [Bacillus cereus AH676]
gi|229112264|ref|ZP_04241804.1| hypothetical protein bcere0018_45060 [Bacillus cereus Rock1-15]
gi|229147372|ref|ZP_04275721.1| hypothetical protein bcere0012_45020 [Bacillus cereus BDRD-ST24]
gi|296505264|ref|YP_003666964.1| hypothetical protein BMB171_C4436 [Bacillus thuringiensis BMB171]
gi|228636054|gb|EEK92535.1| hypothetical protein bcere0012_45020 [Bacillus cereus BDRD-ST24]
gi|228671248|gb|EEL26552.1| hypothetical protein bcere0018_45060 [Bacillus cereus Rock1-15]
gi|228722868|gb|EEL74250.1| hypothetical protein bcere0027_44660 [Bacillus cereus AH676]
gi|296326316|gb|ADH09244.1| hypothetical protein BMB171_C4436 [Bacillus thuringiensis BMB171]
Length = 345
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 110/242 (45%), Gaps = 39/242 (16%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISIYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC--TI 116
+++ + I++LG+G +P + A RI + Y KQ +++ TI
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY------------WKQAAVNTPPTI 206
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK 174
I SGG GL E+ + +E G+ + E +S++T+QN FS ++ ++ +GK
Sbjct: 207 IFSGGQGPDEGLPEAEAMQSYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGK 266
Query: 175 -NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
I ++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I
Sbjct: 267 YKSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAI 315
Query: 234 LI 235
++
Sbjct: 316 VV 317
>gi|168213058|ref|ZP_02638683.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
gi|170715436|gb|EDT27618.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
Length = 257
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
++ + I++SGG + E+ L+E+GV +D I LE ++ T++N +S +
Sbjct: 127 EKTGFNGEIVVSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKI 186
Query: 168 IKNMQGK-----NIILVSSAYHLKRSQLYFQHFGIN 198
I+N+ GK +I++V++ +H RS L + G N
Sbjct: 187 IENLSGKPIKDLDILIVTTDFHAMRSNLLAKRNGYN 222
>gi|162449133|ref|YP_001611500.1| hypothetical protein sce0863 [Sorangium cellulosum 'So ce 56']
gi|161159715|emb|CAN91020.1| hypothetical protein sce0863 [Sorangium cellulosum 'So ce 56']
Length = 253
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SG D + + + L+E GV R I LET+S DT +NA S+ + + +
Sbjct: 129 VIVSGKDVRGAPTQLASAMADLLVELGVPRKKIILETESRDTRENALHSTRIARGLSADA 188
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYI 231
+++V+SA H+ RS F+ G++ + + + ++P S + ++ A+ E +
Sbjct: 189 VVVVTSALHMPRSLRMFERAGLDVLPAPVRFQSLPPEGPERLLPESLSLRRSQRAVHELV 248
Query: 232 GIL 234
G+L
Sbjct: 249 GLL 251
>gi|146341164|ref|YP_001206212.1| hypothetical protein BRADO4236 [Bradyrhizobium sp. ORS278]
gi|146193970|emb|CAL77987.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 262
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 14/222 (6%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
++ MLL + +G + +++L L+ + P P IIVL G + + I
Sbjct: 41 LVASAMLLLAIVGLTPLGSLMLYPLESRF--PKWDPAKGAPDGIIVLGGPVDSDLSAIYG 98
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL-AESIVYNNKLLES-G 142
+ + + R+ + L + + ++ +GG A+ ++LES G
Sbjct: 99 MPV--TVAGADRVIQAAVLARRYP----NARVLFTGGSANLIATDAKEADVGAEILESLG 152
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V + + LE QS +T++NA FS +MI G+ +LV+SAYH+ RS F+ G +
Sbjct: 153 VAKQRLLLERQSRNTYENAIFSKAMIAPKPGERWLLVTSAYHMPRSVGLFRKAGFPVEPY 212
Query: 203 CSDYLNAY---YSIIPLSANFYLTELALKEYIGILIAYYRGN 241
D+ + + L ++A++E++G++ RG
Sbjct: 213 PVDWRVGRVLDFDGVSLQ-GLRRADIAVREWVGLVAYRLRGR 253
>gi|255019747|ref|ZP_05291824.1| hypothetical protein ACA_2404 [Acidithiobacillus caldus ATCC 51756]
gi|254970815|gb|EET28300.1| hypothetical protein ACA_2404 [Acidithiobacillus caldus ATCC 51756]
Length = 267
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 16/185 (8%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC- 114
PLL PQ IV+LG G P + + +R MRL + K
Sbjct: 73 PLLHPQ--PGVGAIVVLGGGEVARPPG-----DGGDMANARTL--MRLEAAAKLAKQSAL 123
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
I+ SGG P+ E+ L ES + I +E +S +T NA SS ++
Sbjct: 124 PIVTSGGAPRFGAPPEATTMARLLRESFAVHNPIWIEGRSFNTAANAFDSSKLLAQKGIH 183
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALK 228
+ LV+SA H+ R+ +F+ G++ DY + Y S +P + + A+
Sbjct: 184 RVYLVTSALHMPRAMAWFRRAGLDPVPVPCDYRLDRGLTSGYESWLPRAIYLEASSEAIH 243
Query: 229 EYIGI 233
EY+G+
Sbjct: 244 EYLGL 248
>gi|148544180|ref|YP_001271550.1| hypothetical protein Lreu_0951 [Lactobacillus reuteri DSM 20016]
gi|184153552|ref|YP_001841893.1| hypothetical protein LAR_0897 [Lactobacillus reuteri JCM 1112]
gi|227364609|ref|ZP_03848669.1| conserved hypothetical protein [Lactobacillus reuteri MM2-3]
gi|325682276|ref|ZP_08161793.1| hypothetical protein HMPREF0536_10714 [Lactobacillus reuteri
MM4-1A]
gi|148531214|gb|ABQ83213.1| protein of unknown function DUF218 [Lactobacillus reuteri DSM
20016]
gi|183224896|dbj|BAG25413.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
gi|227070353|gb|EEI08716.1| conserved hypothetical protein [Lactobacillus reuteri MM2-3]
gi|324978115|gb|EGC15065.1| hypothetical protein HMPREF0536_10714 [Lactobacillus reuteri
MM4-1A]
Length = 271
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 102 RLYKS--CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL K+ C + II+SGG QK +E+ V L+ G+ I ETQ+L+T+Q
Sbjct: 128 RLDKAINCWKTHQSAKIIVSGGIVQKAKESEAEVMAAYLIAHGIPARKIICETQALNTWQ 187
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
N F+ +IK + I++V+S +H+ R++ Y + G+N
Sbjct: 188 NLTFARQLIKPQE--TIVVVTSDFHVLRARAYARKMGLN 224
>gi|300312046|ref|YP_003776138.1| hypothetical protein Hsero_2734 [Herbaspirillum seropedicae SmR1]
gi|300074831|gb|ADJ64230.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 263
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
L + I + ++++ L+ Y P+LS + + IV+L G+ R +P +
Sbjct: 48 LLTLICMPAVADLMVRPLEQGY--PVLSAEAARQAQAIVVLAAGSLDQAPEYEGRDQPDY 105
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK-- 149
+ +R+ RL QH +++SGG+ ++ E+ N L + R+D +
Sbjct: 106 VALARLRYAARL-----QHQTGLPVLVSGGNARE----ETPEQNKALAMAEALREDFRTP 156
Query: 150 ---LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+E S +T +NA S+++++ + ++LV+ A H+ R+ L F G+ A+ + +
Sbjct: 157 VRWIEGGSENTEENALRSAALLRADGVQRVLLVTDAMHMPRAMLAFAQAGLVPTAAPTAF 216
Query: 207 LN----AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + +++P + + A E++G + +YR
Sbjct: 217 FSLPRWRWPALLPSAEGLRRSWYASYEWLG--LGWYR 251
>gi|228941987|ref|ZP_04104530.1| hypothetical protein bthur0008_46210 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228974918|ref|ZP_04135479.1| hypothetical protein bthur0003_46680 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981511|ref|ZP_04141808.1| hypothetical protein bthur0002_46720 [Bacillus thuringiensis Bt407]
gi|228778190|gb|EEM26460.1| hypothetical protein bthur0002_46720 [Bacillus thuringiensis Bt407]
gi|228784771|gb|EEM32789.1| hypothetical protein bthur0003_46680 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228817656|gb|EEM63738.1| hypothetical protein bthur0008_46210 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 345
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 109/242 (45%), Gaps = 39/242 (16%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC--TI 116
+++ + I++LG+G +P + A RI + Y KQ +++ TI
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY------------WKQAAVNTPPTI 206
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK 174
I SGG GL E+ + +E G+ + E +S++T+QN FS ++ ++ +GK
Sbjct: 207 IFSGGQGPDEGLPEAEAMQSYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGK 266
Query: 175 -NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
I ++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I
Sbjct: 267 YKSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAI 315
Query: 234 LI 235
++
Sbjct: 316 VV 317
>gi|188582432|ref|YP_001925877.1| hypothetical protein Mpop_3190 [Methylobacterium populi BJ001]
gi|179345930|gb|ACB81342.1| protein of unknown function DUF218 [Methylobacterium populi BJ001]
Length = 278
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 113 HCTIIISGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
++ SGG ++ ++E+ + + GV R+ + LE QS +T +NA FS+ M++
Sbjct: 135 QARLVFSGGAGSLREDAVSEAEIVSRYADTLGVPRNRLILEQQSRNTHENAVFSARMVQP 194
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFY---LTEL-- 225
G+ +LV+SA+H+ R+ F+ G + A DY + A+F L EL
Sbjct: 195 KPGERWLLVTSAWHMPRAVGCFRRAGFDVTAYPVDYRTNWPRDATRFASFASDGLGELDI 254
Query: 226 ALKEYIGILIAY 237
+KE+IG LIAY
Sbjct: 255 GVKEWIG-LIAY 265
>gi|168217115|ref|ZP_02642740.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
gi|182624176|ref|ZP_02951962.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|177910590|gb|EDT72958.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|182380858|gb|EDT78337.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
Length = 257
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
++ + I++SGG + E+ L+E+GV +D I LE ++ T++N +S +
Sbjct: 127 EKTGFNGEIVVSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKI 186
Query: 168 IKNMQGK-----NIILVSSAYHLKRSQLYFQHFGIN 198
I+N+ GK +I++V++ +H RS L + G N
Sbjct: 187 IENLSGKPIKDLDILVVTTDFHAMRSNLLAKRNGYN 222
>gi|169343962|ref|ZP_02864953.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
gi|169297870|gb|EDS79965.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
Length = 262
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK- 174
I++SGG + E+ L+E+GV +D I LE ++ T++N +S +I+N+ GK
Sbjct: 135 IVVSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKIIENLSGKP 194
Query: 175 ----NIILVSSAYHLKRSQLYFQHFGIN 198
+I++V++ +H RS L + G N
Sbjct: 195 IKDLDILVVTTDFHAMRSNLLAKRNGYN 222
>gi|218906031|ref|YP_002453865.1| hypothetical protein BCAH820_4919 [Bacillus cereus AH820]
gi|218540175|gb|ACK92573.1| conserved domain protein [Bacillus cereus AH820]
Length = 344
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 28/194 (14%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY 104
L + + + RP +++ + I++LG+G P + SRI + + Y
Sbjct: 148 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLA--------SRIHKAIDFY 193
Query: 105 KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
+ TII SGG GL E+ +E G+ + E +S++T+QN FS
Sbjct: 194 WKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFS 253
Query: 165 SSMIKNMQ--GK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFY 221
++ +++ GK I ++ +HL R+ +Y + G+N++ S +A +Y
Sbjct: 254 KEIMDSLKPDGKYKSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYY 302
Query: 222 LTELALKEYIGILI 235
++EY+ I++
Sbjct: 303 WPNAMIREYVAIVV 316
>gi|301056307|ref|YP_003794518.1| hypothetical protein BACI_c47980 [Bacillus anthracis CI]
gi|300378476|gb|ADK07380.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
Length = 345
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A SRI + +
Sbjct: 149 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLA----------SRIHKAID 192
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
Y + TII SGG GL E+ +E G+ + E +S++T+QN
Sbjct: 193 FYWKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNML 252
Query: 163 FSSSMIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
FS ++ ++ +GK I ++ +HL R+ +Y + G+N++ S +A
Sbjct: 253 FSKEIMDSLKPEGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAF 301
Query: 220 FYLTELALKEYIGILI 235
+Y ++EY+ I++
Sbjct: 302 YYWPNAMIREYVAIVV 317
>gi|282900121|ref|ZP_06308078.1| protein of unknown function DUF218 [Cylindrospermopsis raciborskii
CS-505]
gi|281195003|gb|EFA69943.1| protein of unknown function DUF218 [Cylindrospermopsis raciborskii
CS-505]
Length = 263
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGG--DPQKHGLAESIVYNNKLLESGVERDDIK 149
+S R+ +LY K II+SGG D + G ES L+ G+ + I
Sbjct: 101 ESGDRVIYAAQLYGQKKAP----LIILSGGRIDWRGGGTPESADMATILISLGIPPEVII 156
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-- 207
E SL+T++NA ++++ K ++LV+SA H RS FQ G+ + +D++
Sbjct: 157 EEPNSLNTYENAVNVKKILESRGIKKVLLVTSAMHTPRSLKIFQRQGVEVIPAPTDFIVS 216
Query: 208 ------------NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ ++ P + N ALKEYIG L+ RG
Sbjct: 217 RSDLEELIATPKSTILNLFPSADNLNDFTNALKEYIGYLVYALRG 261
>gi|228988059|ref|ZP_04148160.1| hypothetical protein bthur0001_47210 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228771693|gb|EEM20158.1| hypothetical protein bthur0001_47210 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 344
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 36/198 (18%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A RI + Y
Sbjct: 148 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLASRINKAIDFY-------- 193
Query: 103 LYKSCKQHSMHC--TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
KQ +++ TII SGG GL E+ +E G+ + E +S++T+QN
Sbjct: 194 ----WKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQN 249
Query: 161 AQFSSSMIKNMQ--GK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
FS ++ +++ GK I ++ +HL R+ +Y + G+N++ S +
Sbjct: 250 MSFSKDIMDSLKPDGKYRSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------T 298
Query: 218 ANFYLTELALKEYIGILI 235
A +Y ++EY+ I++
Sbjct: 299 AFYYWPNAMIREYVAIVV 316
>gi|326942590|gb|AEA18486.1| hypothetical protein CT43_CH4827 [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 234
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 32/196 (16%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMR 102
L + + + RP +++ + I++LG+G +P + A SRI + +
Sbjct: 38 LSAYFLYQFNRP------RRNQDFIIVLGSGLINDKVPPLLA----------SRINKAID 81
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
Y + TII SGG GL E+ + +E G+ + E +S++T+QN
Sbjct: 82 FYWKQAAVNTPPTIIFSGGQGPDEGLPEAEAMQSYAVEKGIPLEHTVQENRSVNTYQNML 141
Query: 163 FSSSMIKNM--QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
FS ++ ++ +GK I ++ +HL R+ +Y + G+N++ S +A
Sbjct: 142 FSKEIMDSLKPEGKYKSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAF 190
Query: 220 FYLTELALKEYIGILI 235
+Y ++EY+ I++
Sbjct: 191 YYWPNAMIREYVAIVV 206
>gi|269963112|ref|ZP_06177447.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832076|gb|EEZ86200.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 268
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 35/232 (15%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTII 79
CF++LFSF+G + + T LL L+ Y+ L G + +++LG G +
Sbjct: 38 GCFVVLFSFVGIFLVAFQPVSTKLLMPLEREYKAFL-----PVSGTVDYVMVLGAGHVVD 92
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIISG--GDPQKHGLAESIVYN 135
IP P+ Q SR MRL + + M+ +I+SG G + ++ + +
Sbjct: 93 DEIP-----PTSQ-LSRT-ALMRLTEGIRILRMYPGAKLILSGYAGGSE---ISHARMMA 142
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
N L GV + DI L + DT++ A+ +++ +K K+I+LV+SA H+KR+ F
Sbjct: 143 NVALSLGVAKSDIILLEDAKDTWEEARQAAAFVKQ---KDIVLVTSASHMKRALYEFNAA 199
Query: 196 GINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
GI + ++++ + P + TEL EY+G L R N
Sbjct: 200 GIKPIPAPTNFMAIDDIEQPWQKYAPKARYLEQTELYWHEYLGGLWQKLRDN 251
>gi|169828730|ref|YP_001698888.1| hypothetical protein Bsph_3253 [Lysinibacillus sphaericus C3-41]
gi|168993218|gb|ACA40758.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
Length = 289
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 28/181 (15%)
Query: 60 PQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P++ +D I++LG+G +P + A SRI + + Y S TII
Sbjct: 104 PKYNQD--FIIVLGSGLINDKVPPLLA----------SRIQKAIDFYHKQATVSTPPTII 151
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM---IKNMQGK 174
SGG L E+ +E G+ + E +S++T+QN FS + IK +
Sbjct: 152 FSGGQGSDENLPEAEAMQRYAIEKGIPIEHTLQENRSVNTYQNMLFSKQIMDDIKQGEAY 211
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
N I ++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I+
Sbjct: 212 NSIFTTNNFHLFRAGIYARLAGLNSQGIGSK-----------TAFYYWPNAMIREYVAIV 260
Query: 235 I 235
+
Sbjct: 261 V 261
>gi|306844040|ref|ZP_07476635.1| Hypothetical protein BIBO1_0705 [Brucella sp. BO1]
gi|306275795|gb|EFM57519.1| Hypothetical protein BIBO1_0705 [Brucella sp. BO1]
Length = 264
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKL 150
+ RI ETMRL + II+SGG+ + E+ L + G D
Sbjct: 105 AADRIVETMRLARLYPD----AKIIVSGGEGTFFEKSAREAETTRALLSDLGFSGDRYIF 160
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E +S +T +NA FS ++ + G+ +LV+SAYH+ R+ F+ G + A DY
Sbjct: 161 EGKSRNTVENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRT 220
Query: 211 YSIIPL---SANFYLTE--LALKEYIGILIAYYRGN 241
L S N L+ +AL+E+ G+ ++ G
Sbjct: 221 RETFGLYLESPNDALSRFSMALREWTGLAAYWWTGR 256
>gi|270157480|ref|ZP_06186137.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|289164131|ref|YP_003454269.1| hypothetical protein LLO_0787 [Legionella longbeachae NSW150]
gi|269989505|gb|EEZ95759.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|288857304|emb|CBJ11131.1| hypothetical protein LLO_0787 [Legionella longbeachae NSW150]
Length = 197
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 63 KKDGNIIVLLG----NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
KK ++I++LG +G P + A R+ + LYK+ + ++
Sbjct: 35 KKHADVIIVLGTKSYHGDKYNPCLVA-----------RVQHAVDLYKA----NYAPKLLF 79
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG K+G +E+ V L GV DI LE+ S T++N FS ++ + +I+L
Sbjct: 80 SGGKDTKNGPSEAQVMKEIALHLGVSEQDILLESASASTYENLLFSEKIVSAKKFNSILL 139
Query: 179 VSSAYHLKRSQLYFQHFGINTKAS 202
V+ +HL R+ L Q G+ S
Sbjct: 140 VTEPFHLPRAILVAQKLGLKVSGS 163
>gi|319939407|ref|ZP_08013767.1| GdmH protein [Streptococcus anginosus 1_2_62CV]
gi|319811393|gb|EFW07688.1| GdmH protein [Streptococcus anginosus 1_2_62CV]
Length = 332
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 28/180 (15%)
Query: 64 KDGNIIVLLGNGTT--IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + I++LG+G +P + A R+E Y K H+ H I++SGG
Sbjct: 159 KHPDYIIILGSGLIGDKVPPLLAQRLEKGKTMYE------------KFHN-HPKIVVSGG 205
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IILV 179
+ E+ L + + ++DI +E QS +T +N QFS +++ +N ++V
Sbjct: 206 QGVDEPITEAEAMAQYLRQVCIPQEDIIIEQQSTNTLENLQFSKTILDQKSKENYYCLVV 265
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++++H R+ +Y + GI ++ S +A ++L ++E IG+++ Y++
Sbjct: 266 TNSFHSLRAGIYMRKLGIKGRSIGSR-----------TALYFLPSAWIRETIGLIVLYWK 314
>gi|293559773|ref|ZP_06676293.1| integral membrane protein [Enterococcus faecium E1162]
gi|314950188|ref|ZP_07853473.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0082]
gi|291606256|gb|EFF35670.1| integral membrane protein [Enterococcus faecium E1162]
gi|313643498|gb|EFS08078.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0082]
Length = 399
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG-- 73
L Q I +FF +L++ FI + L S+ P++ +D IV+LG
Sbjct: 177 LPQWINALFFCIPLILIYLFI-------VFYNFLTVSFLYQFNRPRYNQD--FIVVLGAG 227
Query: 74 --NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAE 130
NG T+ P + RI + + Y + + +++ I++ SGG + E
Sbjct: 228 LINGETVSPLLA-----------KRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPE 276
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGK-NIILVSSAYHLKRS 188
++ +E G+ DI +ET S T +N ++S M + M+G I S+ YH+ R+
Sbjct: 277 AMAMKQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRA 336
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
LY + + + +A +YL L+EYI IL+
Sbjct: 337 GLYARQAKLKANGIGAK-----------TAFYYLPNAFLREYIAILM 372
>gi|322385255|ref|ZP_08058902.1| hypothetical protein HMPREF9422_0267 [Streptococcus cristatus ATCC
51100]
gi|321270879|gb|EFX53792.1| hypothetical protein HMPREF9422_0267 [Streptococcus cristatus ATCC
51100]
Length = 337
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 84/181 (46%), Gaps = 28/181 (15%)
Query: 63 KKDGNIIVLLGNGT--TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
KK+ I++LG G +P + A R++ Y ++ + II+SG
Sbjct: 157 KKEPQTIIILGAGLFGDKVPPLLAQRLDKGIAIY-------------EKFNRKPVIIVSG 203
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIIL 178
G ++E+ L+E GV D I LE +S T +N FS ++ + ++ ++L
Sbjct: 204 GQGDDEWISEAEAMAGYLMEKGVPADSIFLENKSRTTLENLIFSKELMLSQGLEQDRVLL 263
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V++++H R+ +Y + G+ ++ S +A ++L ++E G++ Y+
Sbjct: 264 VTNSFHALRAGIYMRQVGLKGRSIGSR-----------TAFYFLPSAWIRETAGLIRIYW 312
Query: 239 R 239
+
Sbjct: 313 K 313
>gi|315640651|ref|ZP_07895756.1| integral membrane protein [Enterococcus italicus DSM 15952]
gi|315483590|gb|EFU74081.1| integral membrane protein [Enterococcus italicus DSM 15952]
Length = 399
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 25/184 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH-CTIII 118
P++ +D +++LG G I R+ P RI + Y + + S H +I+
Sbjct: 214 PKYNQD--FLIVLGAGL-----INGERVTPLLAK--RIDRAILFYHTQRTKSGHPLKLIM 264
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNI 176
SGG + E++ E GV D+ LE S T++N +FS +I+ +
Sbjct: 265 SGGQGADEKVPEAVAMKQYACEQGVPESDVLLEANSSTTYENMRFSKELIEQSAVNDPKA 324
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKA-SCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I VS+ YH+ R+ ++ + ++ + C +A +YL L+E+ IL+
Sbjct: 325 IFVSNNYHIFRAGIFARQAKLSAEGIGCK------------TALYYLPNATLREFAAILV 372
Query: 236 AYYR 239
+ R
Sbjct: 373 MHKR 376
>gi|167039302|ref|YP_001662287.1| hypothetical protein Teth514_0643 [Thermoanaerobacter sp. X514]
gi|256752180|ref|ZP_05493045.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
CCSD1]
gi|300913942|ref|ZP_07131259.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X561]
gi|307725373|ref|YP_003905124.1| hypothetical protein Thet_2282 [Thermoanaerobacter sp. X513]
gi|166853542|gb|ABY91951.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X514]
gi|256748908|gb|EEU61947.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
CCSD1]
gi|300890627|gb|EFK85772.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X561]
gi|307582434|gb|ADN55833.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X513]
Length = 192
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 26/179 (14%)
Query: 31 LLFSFIGW------GIIPTILLKHLQFS-YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
LL FIG ++ T+ + + F+ Y++P KK IIVL G + P
Sbjct: 3 LLLRFIGVLIVIFVTVVITLEYQIISFALYEKP------KKSDVIIVL---GCAVYGKTP 53
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ P F+ R+ E +RLYK II+SGG ++E+ LL++G+
Sbjct: 54 S----PFFKE--RLDEALRLYK----EGYGKYIIVSGGKGPGENISEAEAGKEYLLKNGI 103
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
I + +SL T++N FS ++ K I++S+ +HLKR+ + + GI+ S
Sbjct: 104 PEKIILTDNKSLSTYENLFFSKEIMDKNSLKTAIIISNKFHLKRASVIAKRIGIDASYS 162
>gi|289549962|ref|YP_003470866.1| hypothetical protein SLGD_00591 [Staphylococcus lugdunensis
HKU09-01]
gi|289179494|gb|ADC86739.1| hypothetical protein SLGD_00591 [Staphylococcus lugdunensis
HKU09-01]
Length = 334
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 29/190 (15%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQW-----------KKDGNIIVLLGNGTTIIPTIPAIRIE 88
I T L L F+Y L+ W K +I ++LG+G P +
Sbjct: 122 IFVTYLFTTLIFTYFFGLILSCWLLAIFYSTLNSNKSIDIFLVLGSGLINNKVTPLLA-- 179
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
SRI + +Y+ KQ++ ++SGG ES+ L++ G+ D+I
Sbjct: 180 ------SRINAGLEIYQ--KQNNKQHLFLVSGGQGDDELRPESVAMKEYLVDKGIVEDEI 231
Query: 149 KLETQSLDTFQNAQFSSSMIKN--MQGKNIILVSSAYHLKRS-----QLYFQHF-GINTK 200
E QS T++N FS MI+N + NI++ ++ +H+ R+ +L+F++F + +K
Sbjct: 232 ICEQQSKTTYENLYFSKKMIENLPLNKPNILICTNDFHILRAMFLAKKLHFKNFYSVGSK 291
Query: 201 ASCSDYLNAY 210
+ NA+
Sbjct: 292 TKSYFFTNAF 301
>gi|260558934|ref|ZP_05831121.1| conserved hypothetical protein [Enterococcus faecium C68]
gi|260075042|gb|EEW63357.1| conserved hypothetical protein [Enterococcus faecium C68]
Length = 350
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG-- 73
L Q I +FF +L++ FI + L S+ P++ +D IV+LG
Sbjct: 128 LPQWINALFFCIPLILIYLFI-------VFYNFLTVSFLYQFNRPRYNQD--FIVVLGAG 178
Query: 74 --NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAE 130
NG T+ P + RI + + Y + + +++ I++ SGG + E
Sbjct: 179 LINGETVSPLLA-----------KRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPE 227
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGK-NIILVSSAYHLKRS 188
++ +E G+ DI +ET S T +N ++S M + M+G I S+ YH+ R+
Sbjct: 228 AMAMKQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRA 287
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
LY + + + +A +YL L+EYI IL+
Sbjct: 288 GLYARQAKLKANGIGAK-----------TAFYYLPNAFLREYIAILM 323
>gi|18310223|ref|NP_562157.1| hypothetical protein CPE1241 [Clostridium perfringens str. 13]
gi|18144902|dbj|BAB80947.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 257
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
++ + I++SGG + E+ L+E+GV +D I LE ++ T++N +S +
Sbjct: 127 EKTGFNGEIVVSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKI 186
Query: 168 IKNMQGK-----NIILVSSAYHLKRSQLYFQHFGIN 198
I+N+ GK +I+++++ +H RS L + G N
Sbjct: 187 IENLSGKPIKDLDILVITTDFHAMRSNLLAKRNGYN 222
>gi|257898082|ref|ZP_05677735.1| conserved hypothetical protein [Enterococcus faecium Com15]
gi|257835994|gb|EEV61068.1| conserved hypothetical protein [Enterococcus faecium Com15]
Length = 368
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG-- 73
L Q I +FF +L++ FI + L S+ P++ +D IV+LG
Sbjct: 146 LPQWINALFFCIPLILIYLFI-------VFYNFLTVSFLYQFNRPRYNQD--FIVVLGAG 196
Query: 74 --NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAE 130
NG T+ P + RI + + Y + + +++ I++ SGG + E
Sbjct: 197 LINGETVSPLLA-----------KRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPE 245
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGK-NIILVSSAYHLKRS 188
++ +E G+ DI +ET S T +N ++S M + M+G I S+ YH+ R+
Sbjct: 246 AMAMKQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRA 305
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
LY + + + +A +YL L+EYI IL+
Sbjct: 306 GLYARQAKLKANGIGAK-----------TAFYYLPNAFLREYIAILM 341
>gi|257890483|ref|ZP_05670136.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
gi|257826843|gb|EEV53469.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
Length = 368
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG-- 73
L Q I +FF +L++ FI + L S+ P++ +D IV+LG
Sbjct: 146 LPQWINALFFCIPLILIYLFI-------VFYNFLTVSFLYQFNRPRYNQD--FIVVLGAG 196
Query: 74 --NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAE 130
NG T+ P + RI + + Y + + +++ I++ SGG + E
Sbjct: 197 LINGETVSPLLA-----------KRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPE 245
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGK-NIILVSSAYHLKRS 188
++ +E G+ DI +ET S T +N ++S M + M+G I S+ YH+ R+
Sbjct: 246 AMAMKQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRA 305
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
LY + + + +A +YL L+EYI IL+
Sbjct: 306 GLYARQAKLKANGIGAK-----------TAFYYLPNAFLREYIAILM 341
>gi|118474006|ref|YP_889974.1| hypothetical protein MSMEG_5741 [Mycobacterium smegmatis str. MC2
155]
gi|118175293|gb|ABK76189.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
155]
Length = 211
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+I++GG+PQ+ G+ E+ N LL G + I +E ++ T QNAQFS + K
Sbjct: 96 QSPVIVTGGNPQR-GVTEAAAMRNLLLMLGFPANRIIVEDRANSTVQNAQFSVPLAKKAG 154
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
IILV+S+ H R+ F G N A+ S
Sbjct: 155 TTGIILVTSSSHQGRADQNFADAGGNILATVS 186
>gi|34496963|ref|NP_901178.1| transmembrane protein [Chromobacterium violaceum ATCC 12472]
gi|34102819|gb|AAQ59183.1| probable transmembrane protein [Chromobacterium violaceum ATCC
12472]
Length = 254
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 25/208 (12%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
IP + Q + P + P + IV+LG G P PS + +R+
Sbjct: 58 IPQTAIWLAQGVERYPPIRPADLAAADAIVVLGGGKRPAPEFGGN--APSSDTLARLRYA 115
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL-----ETQSL 155
L + + ++++GG P G E V + L DD + E +S
Sbjct: 116 AYLARQSGK-----PVLVTGGSPLG-GEPEGKVMASAL------HDDYGIRARWVEDRSD 163
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN----AYY 211
T NA+ S+ M+K I LVS +HL R+ +FQ G+ + + ++ A+
Sbjct: 164 TTLDNARLSAEMLKAAGATRIALVSQGWHLGRAVPFFQSQGLQVSPAPTGFVRYEGPAFT 223
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYR 239
+P + L+EYIG+L YYR
Sbjct: 224 RYLPSGKAMGDCHVLLREYIGLL--YYR 249
>gi|304392434|ref|ZP_07374375.1| periplasmic protein [Ahrensia sp. R2A130]
gi|303295538|gb|EFL89897.1| periplasmic protein [Ahrensia sp. R2A130]
Length = 189
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 69/133 (51%), Gaps = 14/133 (10%)
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
Q + +++SGG +H E+ + GV + + LE +S +TF+N FS++++
Sbjct: 38 QQGLAPILVLSGGL-GRHPPTEAKAMAEICMGEGVPQAALLLEGRSTNTFENVAFSAALL 96
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQHFG--INTKASCSDYLNAYYSIIPLSANFYLTELA 226
+ + ++++VS AYHL R+++ F++ G A+ + +Y +A ++L E+
Sbjct: 97 REKRVNSVLVVSDAYHLPRAKMCFRYLGFIATGSAAVAGPTTPWYR----TARYWLREI- 151
Query: 227 LKEYIGILIAYYR 239
+ I YYR
Sbjct: 152 ------VAIPYYR 158
>gi|282896704|ref|ZP_06304712.1| hypothetical protein CRD_01413 [Raphidiopsis brookii D9]
gi|281198422|gb|EFA73310.1| hypothetical protein CRD_01413 [Raphidiopsis brookii D9]
Length = 263
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 28/230 (12%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
S +L+ + GW + K L S + + P + IV+LG G T P
Sbjct: 44 SLAILMIAGNGW------VSKALVGSLEWQNIPPGKIPEAEAIVVLG-GATKPAAWPRST 96
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG--DPQKHGLAESIVYNNKLLESGVE 144
++ + +S R+ +LY K II+SGG D + G ES L+ G+
Sbjct: 97 VDLN-ESGDRVIYAAQLYGQKKAP----LIILSGGRIDWRGSGPPESADMAAILISLGIP 151
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ I E SL+T++NA ++++ K ++LV+SA H RS FQ G+ + +
Sbjct: 152 PEVIIEEPNSLNTYENAVNVRKILESRGIKKVLLVTSAMHTPRSLKIFQRQGVEVIPAPT 211
Query: 205 DYL--------------NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
D++ + ++ P + N ALKEYIG L+ RG
Sbjct: 212 DFIVSRSDLEELIATPKSTILNLFPSADNLNDFTNALKEYIGYLVYALRG 261
>gi|23502055|ref|NP_698182.1| hypothetical protein BR1177 [Brucella suis 1330]
gi|62290089|ref|YP_221882.1| hypothetical protein BruAb1_1183 [Brucella abortus bv. 1 str.
9-941]
gi|82700013|ref|YP_414587.1| hypothetical protein BAB1_1199 [Brucella melitensis biovar Abortus
2308]
gi|225627645|ref|ZP_03785682.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237815595|ref|ZP_04594592.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|256369602|ref|YP_003107112.1| hypothetical protein BMI_I1188 [Brucella microti CCM 4915]
gi|297248487|ref|ZP_06932205.1| hypothetical protein BAYG_01444 [Brucella abortus bv. 5 str. B3196]
gi|23348011|gb|AAN30097.1| conserved hypothetical protein [Brucella suis 1330]
gi|62196221|gb|AAX74521.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616114|emb|CAJ11155.1| Protein of unknown function DUF218 [Brucella melitensis biovar
Abortus 2308]
gi|225617650|gb|EEH14695.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237788893|gb|EEP63104.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|255999764|gb|ACU48163.1| hypothetical protein BMI_I1188 [Brucella microti CCM 4915]
gi|297175656|gb|EFH35003.1| hypothetical protein BAYG_01444 [Brucella abortus bv. 5 str. B3196]
Length = 268
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKL 150
+ RI ETMRL + I++SGG+ + E+ LL+ G +
Sbjct: 109 AADRIVETMRLARLYPD----AKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIF 164
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E +S +T +NA FS ++ + G+ +LV+SAYH+ R+ F+ G + A DY
Sbjct: 165 EGKSRNTVENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRT 224
Query: 211 YSIIPL---SANFYLTE--LALKEYIGILIAYYRGN 241
L S N L+ +AL+E+ G+ ++ G
Sbjct: 225 RETFGLYLESPNDALSRFSMALREWTGLAAYWWTGR 260
>gi|256159910|ref|ZP_05457632.1| hypothetical protein BcetM4_13019 [Brucella ceti M490/95/1]
gi|256255144|ref|ZP_05460680.1| hypothetical protein BcetB_12801 [Brucella ceti B1/94]
gi|261222341|ref|ZP_05936622.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265998306|ref|ZP_06110863.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260920925|gb|EEX87578.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262552774|gb|EEZ08764.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 264
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKL 150
+ RI ETMRL + I++SGG+ + E+ LL+ G +
Sbjct: 105 AADRIVETMRLARLYPD----AKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIF 160
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E +S +T +NA FS ++ + G+ +LV+SAYH+ R+ F+ G + A DY
Sbjct: 161 EGKSRNTVENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRT 220
Query: 211 YSIIPL---SANFYLTE--LALKEYIGILIAYYRGN 241
L S N L+ +AL+E+ G+ ++ G
Sbjct: 221 RETFGLYLESPNDALSRFSMALREWTGLAAYWWTGR 256
>gi|161619130|ref|YP_001593017.1| hypothetical protein BCAN_A1197 [Brucella canis ATCC 23365]
gi|260566292|ref|ZP_05836762.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|161335941|gb|ABX62246.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
gi|260155810|gb|EEW90890.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
Length = 264
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKL 150
+ RI ETMRL + I++SGG+ + E+ LL+ G +
Sbjct: 105 AADRIVETMRLARLYPD----AKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIF 160
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E +S +T +NA FS ++ + G+ +LV+SAYH+ R+ F+ G + A DY
Sbjct: 161 EGKSRNTVENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRT 220
Query: 211 YSIIPL---SANFYLTE--LALKEYIGILIAYYRGN 241
L S N L+ +AL+E+ G+ ++ G
Sbjct: 221 RETFGLYLESPNDALSRFSMALREWTGLAAYWWTGR 256
>gi|223982522|ref|ZP_03632760.1| hypothetical protein HOLDEFILI_00034 [Holdemania filiformis DSM
12042]
gi|223965497|gb|EEF69771.1| hypothetical protein HOLDEFILI_00034 [Holdemania filiformis DSM
12042]
Length = 246
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NM 171
CT+I++GG AES + N L+E+G+E + I E Q+ +T +N ++S +++ N
Sbjct: 127 ECTVIVTGGQGNGEDYAESTIMKNWLVENGLETNRILEENQARNTGENLKYSLKLLRQNN 186
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGI 197
+N+++V+ ++H R+ + + GI
Sbjct: 187 LSENVVIVTDSFHQLRASILAKQLGI 212
>gi|254430947|ref|ZP_05044650.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
gi|197625400|gb|EDY37959.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
Length = 265
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 24/201 (11%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
L P + +V+LG G + P P R ++ R+ +RL + K T++
Sbjct: 69 LEPASLPAADAVVVLGGG--LRPAQPPRRGVEVGEAGDRLLTGVRLLRQGKAP----TLV 122
Query: 118 ISGG----DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
SGG K E+ + +E G+ + I L ++ T + A+ +M +
Sbjct: 123 TSGGRVHFTAGKPPPPEAEWARDLAVELGIAPERILLAREARTTAEEARDLGAMGRTRGW 182
Query: 174 KNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYL-------------NAYYSIIPLSAN 219
++LV+SA H+ R+ FQ G+ A +D+ +A S+ P +
Sbjct: 183 SRVLLVTSASHMPRALATFQRRSGLEVVAVPTDFQLPQRASYGAPTLGSALLSVAPDAEA 242
Query: 220 FYLTELALKEYIGILIAYYRG 240
YL+ + LKE++G+L+ RG
Sbjct: 243 LYLSTVMLKEHLGLLVYRLRG 263
>gi|253582533|ref|ZP_04859755.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251835678|gb|EES64217.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 351
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+ II++GG P K G+ E+ + L+E GV + +E Q+ DT NA +S ++K +
Sbjct: 216 NAEIIVTGGVP-KGGVTEAYLMKKWLVEKGVNPSKVHIEDQAKDTVGNALYSVEIMKKLG 274
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
+N+ L+SSA H++R F+ ++ + S N Y P
Sbjct: 275 TENMTLISSASHMRRGLAVFKEMAVSEGLNLSVMDNLVYLDYP 317
>gi|170017164|ref|YP_001728083.1| integral membrane protein [Leuconostoc citreum KM20]
gi|169804021|gb|ACA82639.1| Integral membrane protein [Leuconostoc citreum KM20]
Length = 353
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 25/199 (12%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLG--NGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
+L L + ++ P++ K+ I++ G NG T+ P + + RI + + F+ +
Sbjct: 157 VLAFLASYFLTKIVKPKYNKEYAIVLGSGLINGDTVSPLLGS-RILVAAK-----FKAKQ 210
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
L KS K+ +I+SGG L ES+ +++GV DI ++ QS +T+QN
Sbjct: 211 LAKSKKK----MILIMSGGQGSDEKLPESVAMKAYAIKNGVPESDILVDDQSKNTYQNML 266
Query: 163 FSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF 220
FS +I + + I ++ YH+ R+ + + G+N S ++ +
Sbjct: 267 FSKQVIIDNGLDLQKGIFTTNDYHVFRAAGFARLVGLNIDGIGSK-----------TSKY 315
Query: 221 YLTELALKEYIGILIAYYR 239
+L ++EYI IL+ + +
Sbjct: 316 FLPNALIREYIAILVKHKK 334
>gi|256061258|ref|ZP_05451408.1| hypothetical protein Bneo5_12948 [Brucella neotomae 5K33]
gi|261325265|ref|ZP_05964462.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261301245|gb|EEY04742.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 264
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKL 150
+ RI ETMRL + I++SGG+ + E+ LL+ G +
Sbjct: 105 AADRIVETMRLARLYPD----AKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIF 160
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E +S +T +NA FS ++ + G+ +LV+SAYH+ R+ F+ G + A DY
Sbjct: 161 EGKSRNTVENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRT 220
Query: 211 YSIIPL---SANFYLTE--LALKEYIGILIAYYRGN 241
L S N L+ +AL+E+ G+ ++ G
Sbjct: 221 RETFGLYLESPNDALSRFSMALREWTGLAAYWWTGR 256
>gi|110801440|ref|YP_698578.1| hypothetical protein CPR_1256 [Clostridium perfringens SM101]
gi|110681941|gb|ABG85311.1| conserved hypothetical protein [Clostridium perfringens SM101]
Length = 257
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
++ + II+SGG + E+ L+E+GV +D I LE ++ T++N +S +
Sbjct: 127 EKTGFNGEIIVSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKI 186
Query: 168 IKNMQGK-----NIILVSSAYHLKRSQLYFQHFG 196
I+N+ GK +I++V++ +H RS L + G
Sbjct: 187 IENLSGKPIKDLDILVVTTDFHAMRSNLLAKRNG 220
>gi|294852515|ref|ZP_06793188.1| hypothetical protein BAZG_01442 [Brucella sp. NVSL 07-0026]
gi|294821104|gb|EFG38103.1| hypothetical protein BAZG_01442 [Brucella sp. NVSL 07-0026]
Length = 264
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKL 150
+ RI ETMRL + I++SGG+ + E+ LL+ G +
Sbjct: 105 AADRIVETMRLARLYPD----AKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIF 160
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E +S +T +NA FS ++ + G+ +LV+SAYH+ R+ F+ G + A DY
Sbjct: 161 EGKSRNTVENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRT 220
Query: 211 YSIIPL---SANFYLTE--LALKEYIGILIAYYRGN 241
L S N L+ +AL+E+ G+ ++ G
Sbjct: 221 RETFGLYLESPNDALSRFSMALREWTGLAAYWWTGR 256
>gi|17987093|ref|NP_539727.1| hypothetical protein BMEI0810 [Brucella melitensis bv. 1 str. 16M]
gi|163843442|ref|YP_001627846.1| hypothetical protein BSUIS_A1225 [Brucella suis ATCC 23445]
gi|189024327|ref|YP_001935095.1| hypothetical protein BAbS19_I11160 [Brucella abortus S19]
gi|225852674|ref|YP_002732907.1| hypothetical protein BMEA_A1222 [Brucella melitensis ATCC 23457]
gi|254689399|ref|ZP_05152653.1| hypothetical protein Babob68_04337 [Brucella abortus bv. 6 str.
870]
gi|254693883|ref|ZP_05155711.1| hypothetical protein Babob3T_04332 [Brucella abortus bv. 3 str.
Tulya]
gi|254697533|ref|ZP_05159361.1| hypothetical protein Babob28_07456 [Brucella abortus bv. 2 str.
86/8/59]
gi|254701918|ref|ZP_05163746.1| hypothetical protein Bsuib55_13827 [Brucella suis bv. 5 str. 513]
gi|254704463|ref|ZP_05166291.1| hypothetical protein Bsuib36_11145 [Brucella suis bv. 3 str. 686]
gi|254710250|ref|ZP_05172061.1| hypothetical protein BpinB_08247 [Brucella pinnipedialis B2/94]
gi|254714246|ref|ZP_05176057.1| hypothetical protein BcetM6_13021 [Brucella ceti M644/93/1]
gi|254717682|ref|ZP_05179493.1| hypothetical protein BcetM_15020 [Brucella ceti M13/05/1]
gi|254730428|ref|ZP_05189006.1| hypothetical protein Babob42_04352 [Brucella abortus bv. 4 str.
292]
gi|256031744|ref|ZP_05445358.1| hypothetical protein BpinM2_14019 [Brucella pinnipedialis
M292/94/1]
gi|256044830|ref|ZP_05447734.1| hypothetical protein Bmelb1R_10074 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256113736|ref|ZP_05454540.1| hypothetical protein Bmelb3E_13258 [Brucella melitensis bv. 3 str.
Ether]
gi|256257645|ref|ZP_05463181.1| hypothetical protein Babob9C_09914 [Brucella abortus bv. 9 str.
C68]
gi|256263835|ref|ZP_05466367.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260168877|ref|ZP_05755688.1| hypothetical protein BruF5_11021 [Brucella sp. F5/99]
gi|260546638|ref|ZP_05822377.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260565570|ref|ZP_05836054.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260754918|ref|ZP_05867266.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758135|ref|ZP_05870483.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260761961|ref|ZP_05874304.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883930|ref|ZP_05895544.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214170|ref|ZP_05928451.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261219524|ref|ZP_05933805.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261317810|ref|ZP_05957007.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261322019|ref|ZP_05961216.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261752483|ref|ZP_05996192.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261755142|ref|ZP_05998851.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261758366|ref|ZP_06002075.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265988841|ref|ZP_06101398.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265991256|ref|ZP_06103813.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265995092|ref|ZP_06107649.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17982753|gb|AAL51991.1| putative membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|163674165|gb|ABY38276.1| protein of unknown function DUF218 [Brucella suis ATCC 23445]
gi|189019899|gb|ACD72621.1| Protein of unknown function DUF218 [Brucella abortus S19]
gi|225641039|gb|ACO00953.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
gi|260095688|gb|EEW79565.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260151638|gb|EEW86732.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260668453|gb|EEX55393.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260672393|gb|EEX59214.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675026|gb|EEX61847.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260873458|gb|EEX80527.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915777|gb|EEX82638.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260924613|gb|EEX91181.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294709|gb|EEX98205.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261297033|gb|EEY00530.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261738350|gb|EEY26346.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261742236|gb|EEY30162.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261744895|gb|EEY32821.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262766205|gb|EEZ11994.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263002040|gb|EEZ14615.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093964|gb|EEZ17898.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|264661038|gb|EEZ31299.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|326409195|gb|ADZ66260.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326538905|gb|ADZ87120.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 264
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKL 150
+ RI ETMRL + I++SGG+ + E+ LL+ G +
Sbjct: 105 AADRIVETMRLARLYPD----AKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIF 160
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E +S +T +NA FS ++ + G+ +LV+SAYH+ R+ F+ G + A DY
Sbjct: 161 EGKSRNTVENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRT 220
Query: 211 YSIIPL---SANFYLTE--LALKEYIGILIAYYRGN 241
L S N L+ +AL+E+ G+ ++ G
Sbjct: 221 RETFGLYLESPNDALSRFSMALREWTGLAAYWWTGR 256
>gi|325524355|gb|EGD02447.1| hypothetical protein B1M_21438 [Burkholderia sp. TJI49]
Length = 97
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
LE S T++NA+F++S++++ ILV+S+Y ++R+ L F FGI+ + ++ +A
Sbjct: 2 LEPDSRTTYENAKFTASILRSRHDDARILVTSSYQMRRALLDFHRFGIDPQPVYANRRDA 61
Query: 210 YYSIIPLSANFYLTELALKEYIGI 233
+P N E AL E +GI
Sbjct: 62 QTGWLPRWRNIVNAEQALHELVGI 85
>gi|190889771|ref|YP_001976313.1| hypothetical protein RHECIAT_CH0000139 [Rhizobium etli CIAT 652]
gi|190695050|gb|ACE89135.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 262
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 105/265 (39%), Gaps = 38/265 (14%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIP--------------------TIL 45
+FLI + CQ + F + F L+ + W ++ +L
Sbjct: 1 MFLISKLVWIFCQPLSLAFLLVFFALIAGLLRWRVLSILGTGASALILFVTLYTTAGNLL 60
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS-RIFETMRLY 104
++ L+ + +P P+ N+ ++ G + R F + R E +RL
Sbjct: 61 MQGLEQRFAKPAADPE-----NLQCMIVLGGAFENEVNTARHGIEFNGGADRFVEALRLA 115
Query: 105 KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES--GVERDDIKLETQSLDTFQNAQ 162
+ Q I++SGGD G+ E ++ G+ RD + ETQS TF+NA
Sbjct: 116 QKFPQSR----ILVSGGDGSMSGIYEGDAAASERFFPLFGIGRDRLIEETQSRTTFENAV 171
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-----LNAYYSIIPLS 217
+ + + +L++S +H+ RS F+ GI+ +DY + +
Sbjct: 172 NTRDFLAGQGLSHCLLITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRPGLDFTQPN 231
Query: 218 ANFYLTELALKEYIGILIAYYRGNR 242
N A++E+ G L+ YY R
Sbjct: 232 LNAQNMATAIREWYG-LVGYYLAGR 255
>gi|116872406|ref|YP_849187.1| hypothetical protein lwe0988 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741284|emb|CAK20406.1| putative membrane protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 344
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 34/190 (17%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH-------SM 112
P++ +D +++LG+G I R+ P S RL ++ K H
Sbjct: 159 PRYNQD--FLIVLGSGL-----IGGDRVPPLLAS--------RLNRAIKFHEKQYLKKGK 203
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNM 171
T I+SGG ++E+ L+E G++ + I +E +S++T QN +FS M M
Sbjct: 204 RATFIVSGGQGANETISEAEAMRAYLIEKGIDENFIIMEDKSVNTLQNMKFSKEKMDAIM 263
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
N + ++ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I
Sbjct: 264 PTYNSLFATNNFHLFRAGIYARKAGLKSQGIGAK-----------TALYYMPNALIREFI 312
Query: 232 GILIAYYRGN 241
I + Y + +
Sbjct: 313 AITVMYKKAH 322
>gi|294616357|ref|ZP_06696150.1| integral membrane protein [Enterococcus faecium E1636]
gi|291590871|gb|EFF22587.1| integral membrane protein [Enterococcus faecium E1636]
Length = 399
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 38/227 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG-- 73
L Q I +FF +L++ FI + L S+ P++ +D IV+LG
Sbjct: 177 LPQWINALFFCVPLILIYLFI-------VFYNFLTVSFLYQFNRPRYNQD--FIVVLGAG 227
Query: 74 --NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAE 130
NG T+ P + RI + + Y++ + +++ I++ SGG + E
Sbjct: 228 LINGETVSPLLA-----------KRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPE 276
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGK-NIILVSSAYHLKRS 188
+I + G+ DI +ET S T +N +S M + M+G I S+ YH+ R+
Sbjct: 277 AIAMKQYAMGQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRA 336
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
LY + + + +A +YL L+EYI IL+
Sbjct: 337 GLYARQAKLKANGIGAK-----------TAFYYLPNAFLREYIAILM 372
>gi|189500837|ref|YP_001960307.1| hypothetical protein Cphamn1_1910 [Chlorobium phaeobacteroides BS1]
gi|189496278|gb|ACE04826.1| protein of unknown function DUF218 [Chlorobium phaeobacteroides
BS1]
Length = 251
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 86/189 (45%), Gaps = 27/189 (14%)
Query: 64 KDGNIIVLLGNGTTIIPTI-------PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ G+ +V+LG +P++ A R E + + + ++ K M T
Sbjct: 70 EQGDAVVVLGGVLWQVPSVRYGEWGEAADRFEGGVEVFRAGKAPLLIFMGAKMPWMPDT- 128
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
P+ LAE + + GV + +++ + +T A+ ++ ++ +
Sbjct: 129 -----RPEGEILAE------RAIRLGVPEEAVRVTERVGNTADEARAVKELLAGIERPEV 177
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEY 230
ILV+SA+H+ R+ + F++ GI + D+ +YY+ +P + +E+A+KE
Sbjct: 178 ILVTSAFHMNRASMLFRNAGIEVQPFPVDFRTSYYNELTLIDFLPSADGVENSEIAMKEM 237
Query: 231 IGILIAYYR 239
+G L YY+
Sbjct: 238 LGTL--YYK 244
>gi|204929871|ref|ZP_03220892.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204320865|gb|EDZ06066.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 258
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 104/224 (46%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F +GW + + L+ + RP+ + P W+ + IV+LG G T P +
Sbjct: 41 VFISVGWLALLLLSLQPVSDHLLRPIENRYPTWQGPQKVEYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL+++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLAEGIRLWRA----NPGAKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+DI +LD ++ + ++ +K G +LV+SA HL R+ ++FQH G+N +
Sbjct: 152 PRNDII----TLDKPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQHAGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ A E +G L + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|322616420|gb|EFY13329.1| hypothetical protein SEEM315_12463 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322619670|gb|EFY16545.1| hypothetical protein SEEM971_17457 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622634|gb|EFY19479.1| hypothetical protein SEEM973_13500 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629783|gb|EFY26558.1| hypothetical protein SEEM974_05201 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632495|gb|EFY29241.1| hypothetical protein SEEM201_14830 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637010|gb|EFY33713.1| hypothetical protein SEEM202_02105 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641450|gb|EFY38088.1| hypothetical protein SEEM954_01478 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646084|gb|EFY42600.1| hypothetical protein SEEM054_01055 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649614|gb|EFY46045.1| hypothetical protein SEEM675_15999 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322654084|gb|EFY50407.1| hypothetical protein SEEM965_12752 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322658616|gb|EFY54878.1| hypothetical protein SEEM19N_16617 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663473|gb|EFY59675.1| hypothetical protein SEEM801_11907 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670209|gb|EFY66349.1| hypothetical protein SEEM507_18684 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671445|gb|EFY67567.1| hypothetical protein SEEM877_09693 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676801|gb|EFY72868.1| hypothetical protein SEEM867_07841 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682726|gb|EFY78745.1| hypothetical protein SEEM180_06892 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686405|gb|EFY82387.1| hypothetical protein SEEM600_05870 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195928|gb|EFZ81095.1| hypothetical protein SEEM581_13156 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199784|gb|EFZ84873.1| hypothetical protein SEEM501_09338 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202777|gb|EFZ87813.1| hypothetical protein SEEM460_08274 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323209048|gb|EFZ93985.1| hypothetical protein SEEM020_20040 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323211524|gb|EFZ96363.1| hypothetical protein SEEM6152_19328 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217991|gb|EGA02706.1| hypothetical protein SEEM0077_06149 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222903|gb|EGA07253.1| hypothetical protein SEEM0047_13265 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323226597|gb|EGA10802.1| hypothetical protein SEEM0055_10125 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229793|gb|EGA13916.1| hypothetical protein SEEM0052_13182 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233018|gb|EGA17114.1| hypothetical protein SEEM3312_03134 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240753|gb|EGA24795.1| hypothetical protein SEEM5258_12744 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323243069|gb|EGA27090.1| hypothetical protein SEEM1156_20594 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249768|gb|EGA33670.1| hypothetical protein SEEM9199_12237 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252759|gb|EGA36597.1| hypothetical protein SEEM8282_16778 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257198|gb|EGA40899.1| hypothetical protein SEEM8283_02209 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323259996|gb|EGA43624.1| hypothetical protein SEEM8284_18093 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323268003|gb|EGA51482.1| hypothetical protein SEEM8285_13226 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269851|gb|EGA53300.1| hypothetical protein SEEM8287_20649 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 258
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 104/224 (46%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F +GW + + L+ + RP+ + P W+ + IV+LG G T P +
Sbjct: 41 VFISVGWLALLLLSLQPVSDHLLRPIENRYPTWQGPQKVEYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL+++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLAEGIRLWRA----NPGAKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+DI +LD ++ + ++ +K G +LV+SA HL R+ ++FQH G+N +
Sbjct: 152 PRNDII----TLDKPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQHAGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ A E +G L + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|269120765|ref|YP_003308942.1| hypothetical protein Sterm_2157 [Sebaldella termitidis ATCC 33386]
gi|268614643|gb|ACZ09011.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 243
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--N 170
H + ++GG + ES++ LE+G++ + I LE +S +T +N +F +K +
Sbjct: 123 HLNVFLTGGQGIDEKVPESVIMKEYFLENGIDENRIFLEDKSTNTNENIKFYIDALKDTD 182
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
M+ NI+LV+S +H+ R+ + +H+ + CS N S IP N ELA
Sbjct: 183 MEYHNILLVTSDFHMPRAGVIARHYNLTVYPLCSKTRNI--SFIP---NIMREELA 233
>gi|296118003|ref|ZP_06836585.1| putative integral membrane protein with DUF218 domain protein
[Corynebacterium ammoniagenes DSM 20306]
gi|295968889|gb|EFG82132.1| putative integral membrane protein with DUF218 domain protein
[Corynebacterium ammoniagenes DSM 20306]
Length = 359
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 27/176 (15%)
Query: 61 QWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+++ + +++LG+G +P + A R++ S + K+ S H II
Sbjct: 175 RYRTEPEAVIVLGSGLINGEVPPLLAARLDKSLEVQ-------------KKFSNHPVIIT 221
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG E + LL GVE + ET+S +T +N FS ++ + +++
Sbjct: 222 SGGQGSDEPRPEGEAMRDYLLSKGVEPARVVAETESRNTEENLHFSRKLLTD-PSDQVVV 280
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+S+YH+ R+ L + G+ +A A+Y Y L+E++GI+
Sbjct: 281 ATSSYHVFRAALLTRTLGM--RAHVVGARTAWY---------YFPSALLREFVGII 325
>gi|161503883|ref|YP_001570995.1| hypothetical protein SARI_01972 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865230|gb|ABX21853.1| hypothetical protein SARI_01972 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 258
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 32/209 (15%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIF 98
LL+ ++ SY P W+ + IV+LG G T P + PS S R+
Sbjct: 62 LLRPIENSY------PTWQGPQKVEYIVVLGGGYTWNP-----QWAPSSNLINNSLPRLA 110
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
E +RL+++ + +I +GG + + ++ + V GV R DI +LD
Sbjct: 111 EGIRLWRA----NPGAKLIFTGGVAKTNTVSTAEVGARVAQSLGVPRSDII----TLDKP 162
Query: 159 QNAQFSSSMIKNMQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYY 211
++ + ++ +K G +LV+SA HL R+ ++FQH G+N + ++ LN +
Sbjct: 163 KDTEEEAAAVKQAIGDTPFLLVTSASHLPRAMIFFQHAGLNPLPAPANQLAIDSPLNPWE 222
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYRG 240
IP ++ A E +G + + +G
Sbjct: 223 QAIPSPVWLMHSDRASYEALGRIWQWLKG 251
>gi|33240920|ref|NP_875862.1| hypothetical protein Pro1471 [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238449|gb|AAQ00515.1| Uncharacterized conserved protein with signal peptide
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 241
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 22/226 (9%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+S F+ L++F G++ +L K ++ +QR S D I+VL G ++ P I I
Sbjct: 24 LSIFIFLWTF-SIGLVSQMLWKFVEHPWQRIDESHAPTADA-IVVLSSGGRSLAPGISNI 81
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL-AESIVYNNKLLESGVE 144
IE + R ++L+K K + T G P + L E +Y + + G+
Sbjct: 82 -IE--WNDPDRFLAGVKLFKEKKAPKLFFT---GGASPYRKALKTEGDLYKEEAISLGIP 135
Query: 145 RDDIKLETQSLDTFQNA-QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ I + +T + A Q ++ I+LV+SA+H++R++ F+ G +
Sbjct: 136 KKAISTTGRVFNTAEEAFQIRRNIKDKGSPSKILLVTSAFHMQRAKRQFERQGFIVQPFP 195
Query: 204 SD----------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
D Y Y+ IP S + +++ AL+E +G A YR
Sbjct: 196 VDFKTERKFRKTYWKNPYNWIPNSESLFMSSKALRELLG--RAVYR 239
>gi|52080430|ref|YP_079221.1| hypothetical protein BL02952 [Bacillus licheniformis ATCC 14580]
gi|52785809|ref|YP_091638.1| hypothetical protein BLi02055 [Bacillus licheniformis ATCC 14580]
gi|319645611|ref|ZP_07999843.1| hypothetical protein HMPREF1012_00876 [Bacillus sp. BT1B_CT2]
gi|52003641|gb|AAU23583.1| conserved hypothetical membrane protein [Bacillus licheniformis
ATCC 14580]
gi|52348311|gb|AAU40945.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
gi|317392497|gb|EFV73292.1| hypothetical protein HMPREF1012_00876 [Bacillus sp. BT1B_CT2]
Length = 343
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 27/193 (13%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY 104
L + + + RP L+ + I++LG+G I T+P + SRI + + Y
Sbjct: 148 LTAYFLYQFNRPKLNQDY------IIVLGSGL-INDTVPPLLA-------SRIDKAVDFY 193
Query: 105 KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
+ + II SGG L+E+ L+ G+ + E +S++T+QN FS
Sbjct: 194 RKQAAVAPPPKIIFSGGQGPDENLSEAEAMQRYALKKGIPEEHTFKEDRSVNTYQNMLFS 253
Query: 165 SSMIKNM-QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYL 222
++ ++ GK N I ++ +HL R+ LY + G+ ++ S +A +Y
Sbjct: 254 KQLMDSLSDGKYNSIFTTNNFHLFRASLYAKRAGLKSQGIGSK-----------TAFYYW 302
Query: 223 TELALKEYIGILI 235
++EYI +++
Sbjct: 303 PNAMIREYIAVVV 315
>gi|17229308|ref|NP_485856.1| hypothetical protein all1816 [Nostoc sp. PCC 7120]
gi|17130906|dbj|BAB73515.1| all1816 [Nostoc sp. PCC 7120]
Length = 215
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
EPS RI + LYK + II +GG + + LAE+IV N + GV+ D
Sbjct: 72 EPSPVFRERINHAINLYK----NGAISKIIFTGGVGEINELAEAIVGRNYAIARGVKAAD 127
Query: 148 IKLETQSLDTFQNAQFSSSMI-KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ ETQS T+QN + + ++ N + +++S HLKR+ L ++ GI+ S
Sbjct: 128 VLTETQSRTTYQNLKNAIEVVGTNEKPTKFLIISDPLHLKRAVLMARNLGIDAYPS 183
>gi|149915963|ref|ZP_01904486.1| hypothetical protein RAZWK3B_00010 [Roseobacter sp. AzwK-3b]
gi|149810037|gb|EDM69885.1| hypothetical protein RAZWK3B_00010 [Roseobacter sp. AzwK-3b]
Length = 266
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 23/249 (9%)
Query: 4 SWI--FLIVSYWHLLCQSIRKIFFMSCFMLLFS-FIGWGIIPTILLKHLQFSYQRPLLSP 60
SWI FL+ + + Q + I F LLF F+G+ + ++++ L+ QR +P
Sbjct: 21 SWIVFFLLFARRAVRAQRMAAIGFWVNGTLLFVLFMGFVPLGQLIMRPLE---QRYPSAP 77
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
IIVL G A+ + + M + +I +G
Sbjct: 78 DIAPPAGIIVLGGGEDG------AMSAASGLPETNGAGDRMSAGVALALAYPDAKLIFTG 131
Query: 121 GDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G Q G++ +IV GV+ + I LE ++ +T +NA FS ++ + + +L
Sbjct: 132 GSGQFLAGGVSGAIVAKAYFESLGVDPERIILEGRARNTAENAAFSRELVDDPRIGPWVL 191
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL------SANFYLTELALKEYIG 232
V+SA+H+ RS F G + + Y SI L + NF L++KE+IG
Sbjct: 192 VTSAFHMPRSLATFCAAGWR---DITPFPVDYRSITDLEFKWDPTGNFEKLNLSIKEWIG 248
Query: 233 ILIAYYRGN 241
+L + G
Sbjct: 249 LLAYEWTGR 257
>gi|37680486|ref|NP_935095.1| hypothetical protein VV2302 [Vibrio vulnificus YJ016]
gi|320155855|ref|YP_004188234.1| membrane protein [Vibrio vulnificus MO6-24/O]
gi|326423949|ref|NP_760999.2| membrane protein [Vibrio vulnificus CMCP6]
gi|37199234|dbj|BAC95066.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
gi|319931167|gb|ADV86031.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio vulnificus MO6-24/O]
gi|319999327|gb|AAO10526.2| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio vulnificus CMCP6]
Length = 266
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 23/188 (12%)
Query: 28 CFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
CF++LFSF+G + + + LL L+ Y L Q + +++LGNG + I
Sbjct: 39 CFIILFSFLGIFLVSFQPVASKLLMPLERQYSVFLPEVQ---TVDYVMVLGNGHVVDDQI 95
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG---GDPQKHGLAESIVYNNKLL 139
P E S S R+ E +R+ K +I+SG G H + N L
Sbjct: 96 PPTS-ELSRASLMRLTEGIRILKMYP----GSKLILSGYAGGSETSHAR----MMANVAL 146
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV + DI L + DT++ A+ +++ ++ K ++LV+SA H+ R+ F GI
Sbjct: 147 ALGVAKSDIILLEDAKDTWEEARQAAAFVRQ---KQLVLVTSASHMARAMKEFHDAGITP 203
Query: 200 KASCSDYL 207
+ ++YL
Sbjct: 204 LPAPTNYL 211
>gi|237808220|ref|YP_002892660.1| hypothetical protein Tola_1459 [Tolumonas auensis DSM 9187]
gi|237500481|gb|ACQ93074.1| protein of unknown function DUF218 [Tolumonas auensis DSM 9187]
Length = 251
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 28/207 (13%)
Query: 43 TILLKHLQFSYQRPL--LSPQWKKDGNI--IVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
T L+ + RPL L P + + + I++LG+G P++P + + + + +RI
Sbjct: 52 TFSLRPVSVGLNRPLEQLYPPFPEGQTVDFIIVLGHGHVSDPSVP-LNSQLTEAASARIQ 110
Query: 99 ETMRLYK-SCKQHSMHCTIIISG---GDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
E +R+ + + K H +I SG GDP ++ + +Y +G+ R+D+ L +
Sbjct: 111 EALRIKRLNPKAH-----MIFSGSIAGDP----VSGAQMYARVAEANGISRNDMTLIENA 161
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN------ 208
DT + S +I N LV+SA H+ R+ F+ N + + Y+
Sbjct: 162 RDTEEEVALDSQLISN---HPTALVTSASHMPRAMSLFRDTAANVIPAPAQYVGRLVQGD 218
Query: 209 -AYYSIIPLSANFYLTELALKEYIGIL 234
Y +P +E+AL E+IG L
Sbjct: 219 IPLYGYLPSGRYLMYSEMALHEWIGTL 245
>gi|289434272|ref|YP_003464144.1| hypothetical protein lse_0905 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170516|emb|CBH27056.1| membrane protein, putative [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 344
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 22/182 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIII 118
P++ +D +++LG+G I R+ P S R+ + Y K + T I+
Sbjct: 159 PRYNQD--FLIVLGSGL-----IGGDRVPPLLAS--RLDRAIAFYEKQLAKKGKRATFIV 209
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNII 177
SGG ++E+ L+ G++ I +E +S++T QN QFS M M N +
Sbjct: 210 SGGQGDNETISEAEAMRGYLISKGIDETFIIMENKSVNTLQNMQFSKKKMDAIMPEYNSL 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ LY + G+ ++ + +A +Y+ ++E+I + Y
Sbjct: 270 FSTNNFHLFRASLYARKAGLKSQGIGAK-----------TALYYMPNALIREFIATIFMY 318
Query: 238 YR 239
+
Sbjct: 319 KK 320
>gi|56413961|ref|YP_151036.1| hypothetical protein SPA1808 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362884|ref|YP_002142521.1| hypothetical protein SSPA1681 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56128218|gb|AAV77724.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094361|emb|CAR59873.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 258
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F +GW + + L+ + RP+ + P W+ + IV+LG G T P +
Sbjct: 41 VFISVGWLALLLLSLQPVSDHLLRPIENRYPTWQGPQQVEYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL+++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLAEGIRLWRA----NPGAKLIFTGGVAKTNTVSTAEVSARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R DI +LD ++ + ++ +K G +LV+SA HL R+ ++FQH G+N +
Sbjct: 152 PRSDII----TLDKPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQHAGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ A E +G L + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|28897807|ref|NP_797412.1| hypothetical protein VP1033 [Vibrio parahaemolyticus RIMD 2210633]
gi|153838515|ref|ZP_01991182.1| integral membrane protein [Vibrio parahaemolyticus AQ3810]
gi|260876969|ref|ZP_05889324.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|260898706|ref|ZP_05907202.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466]
gi|260900663|ref|ZP_05909058.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037]
gi|28806020|dbj|BAC59296.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149748082|gb|EDM58941.1| integral membrane protein [Vibrio parahaemolyticus AQ3810]
gi|308089504|gb|EFO39199.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308093685|gb|EFO43380.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|308106719|gb|EFO44259.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037]
gi|328473218|gb|EGF44066.1| hypothetical protein VP10329_21110 [Vibrio parahaemolyticus 10329]
Length = 261
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 28 CFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIP 80
CF++LFSF+G + + T LL L+ ++ L G I +++LGNG +
Sbjct: 39 CFVVLFSFVGLFLVAFQPVSTKLLMPLEREHKAFL-----PVSGTIDYVMVLGNGHVVDD 93
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYNNKL 138
IP P+ Q SR MRL + + M+ +I+SG D ++ + + N
Sbjct: 94 EIP-----PTSQ-LSRA-ALMRLTEGIRILRMYPGAKLILSGYDGGSE-ISHARMMANVA 145
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
L GV + DI L + DT++ A+ +++ + Q K I+LV+SA H+ R+ F GI
Sbjct: 146 LALGVAKSDIILLEDAKDTWEEARQAAAFV---QQKEIVLVTSASHMSRALYEFNAAGIK 202
Query: 199 TKASCSDYL------NAYYSIIPLSANFYLTELALKEYIG 232
+ +++L + P + TEL EY+G
Sbjct: 203 PIPAPTNFLAIDEVSQPWDKYSPKARYLEQTELFWHEYLG 242
>gi|126463807|ref|YP_001044920.1| hypothetical protein Rsph17029_3048 [Rhodobacter sphaeroides ATCC
17029]
gi|126105618|gb|ABN78148.1| protein of unknown function DUF218 [Rhodobacter sphaeroides ATCC
17029]
Length = 280
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 113 HCTIIISGGDPQKHG--LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
++ +GG + G + E+ + L+ +GV+ + LE QS +T +NA+F+ +++ N
Sbjct: 136 EARVLFTGGSGRLFGAEIPEARIAREILVSAGVDPARLILEGQSRNTAENARFAKALVAN 195
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSI---IPLSANFYLTELA 226
+ +LV+SA+H+ RS F G N +DY A L+ N L +A
Sbjct: 196 QGQGSWLLVTSAFHMPRSVETFCAAGWQNLVPWPTDYRTASLRDGIGWDLARNLDLLNVA 255
Query: 227 LKEYIGIL 234
++E+IGIL
Sbjct: 256 VREWIGIL 263
>gi|90413116|ref|ZP_01221113.1| hypothetical protein P3TCK_00775 [Photobacterium profundum 3TCK]
gi|90325959|gb|EAS42405.1| hypothetical protein P3TCK_00775 [Photobacterium profundum 3TCK]
Length = 284
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 18/192 (9%)
Query: 21 RKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
R+ SCF + F+F+G + I T LL+ L+ Q P + D I++LG+G
Sbjct: 33 RRKGLASCF-IAFAFLGIFMVAFQPIATSLLRPLETENQ-PFVPSSTPVD--YIMVLGSG 88
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
I +P I E S + R+ E MR+Y+ + + G D ++++ +
Sbjct: 89 HVIDKAMP-ITSELSRTALMRLSEGMRIYRLFPGAKLILSGYGGGSD-----ISQARMMA 142
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L GV + DI L + DT++ A ++S++ N KN++LV+SA H+ R+ F
Sbjct: 143 KVALALGVNKSDILLLETARDTWEEAFQAASVVGN---KNLVLVTSASHMTRALYEFNQA 199
Query: 196 GINTKASCSDYL 207
G+ + +++L
Sbjct: 200 GLTPTPAPTNFL 211
>gi|74316470|ref|YP_314210.1| transmembrane protein [Thiobacillus denitrificans ATCC 25259]
gi|74055965|gb|AAZ96405.1| probable transmembrane protein [Thiobacillus denitrificans ATCC
25259]
Length = 251
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
S R+ +RL+++ ++++GG+P LAE + L RDD +E
Sbjct: 104 SLERLRYAVRLHRATG-----LPLLVTGGNPGGGTLAEGQILAQVL------RDDYGIEP 152
Query: 153 Q-----SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS----C 203
+ +L T+ NA+ S+ ++K I LV+ A+HL+R+ F+ + +
Sbjct: 153 RWVEDAALTTWDNARLSAPLLKKSGVHRIALVTHAWHLRRAVPLFEAQELEVIPAGIQFA 212
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
S L+ ++P A + AL E++GIL R N
Sbjct: 213 STDLDRILDLLPTPAGLRDSSFALHEWLGILWYKLRSN 250
>gi|71906187|ref|YP_283774.1| hypothetical protein Daro_0547 [Dechloromonas aromatica RCB]
gi|71845808|gb|AAZ45304.1| Protein of unknown function DUF218 [Dechloromonas aromatica RCB]
Length = 252
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 25/190 (13%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-----YKSCKQH 110
P+L Q G +IV+LG+G +E + + Y T R Y +
Sbjct: 70 PVL--QDAAGGQVIVVLGSG-----------LELNAEEYGGDTATDRTLLRTRYGATLAR 116
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+++SGG P +E+ V + +LE+ + E QS+DT QNA S++++K
Sbjct: 117 RFDLPVLVSGGRPVNATRSEAEVMAD-ILENEFKVPVRWREMQSMDTIQNAALSAAILKK 175
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTE 224
+ I+LV+ A+H+ R+ F+ G+ + + + I+P ++ + +
Sbjct: 176 SGVRRIVLVTQAFHMPRAVRLFRAAGLEVIPAPTHFKTGGVGTIGVADILPSASALHNSF 235
Query: 225 LALKEYIGIL 234
AL E++GI+
Sbjct: 236 YALHEWLGIV 245
>gi|315659410|ref|ZP_07912273.1| membrane protein [Staphylococcus lugdunensis M23590]
gi|315495529|gb|EFU83861.1| membrane protein [Staphylococcus lugdunensis M23590]
Length = 334
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 33/192 (17%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQW-----------KKDGNIIVLLGNGTTIIPTIP--AIR 86
I T L L F+Y L+ W K +I ++LG+G P A R
Sbjct: 122 IFVTYLFTTLIFTYFFGLILSCWLLAIFYSTLNSNKSIDIFLVLGSGLINNKVTPLLASR 181
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
I+ + Y + ++ KQH ++SGG ES+ L++ G+ D
Sbjct: 182 IDAGLEIYQK--------QNNKQH----LFLVSGGQGDDELRPESVAMKEYLVDKGIVED 229
Query: 147 DIKLETQSLDTFQNAQFSSSMIKN--MQGKNIILVSSAYHLKRS-----QLYFQHF-GIN 198
+I E QS T++N FS MI+N + NI++ ++ +H+ R+ +L+F++F +
Sbjct: 230 EIICEQQSKTTYENLYFSKEMIENLPLNKPNILICTNDFHILRAMFLAKKLHFKNFYSVG 289
Query: 199 TKASCSDYLNAY 210
K + NA+
Sbjct: 290 GKTKSYFFTNAF 301
>gi|316933607|ref|YP_004108589.1| hypothetical protein Rpdx1_2264 [Rhodopseudomonas palustris DX-1]
gi|315601321|gb|ADU43856.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
DX-1]
Length = 264
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 20/195 (10%)
Query: 60 PQWKKDG----NIIVLLGNGTTIIPTIPAIRIEPSFQ-SYSRIFETMRLYKSCKQHSMHC 114
P W G IIVL G I + A R S R+ T+ L + Q
Sbjct: 70 PPWHDTGRAPDGIIVL---GGAINSEVSAARNTVELDASAERVLATLDLARRYPQ----A 122
Query: 115 TIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
I+ SGG + AE+ + L G+ + LE QS T +NA + +++
Sbjct: 123 RIVYSGGSGNLIQRSAAEAPLAGELLERFGLAAGRVVLEDQSRTTAENAANTRALVSPKP 182
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELAL 227
G+ +LV+S++H+ RS + FQ G + A D+ + L+A T++A
Sbjct: 183 GELWLLVTSSFHMPRSIMAFQAAGFDVVAYPVDWRTRGREDVALPFATLAAGLARTDVAA 242
Query: 228 KEYIGILIAYYRGNR 242
E+ G L+AY G +
Sbjct: 243 HEWAG-LLAYRLGGK 256
>gi|332528861|ref|ZP_08404835.1| hypothetical protein HGR_03097 [Hylemonella gracilis ATCC 19624]
gi|332041720|gb|EGI78072.1| hypothetical protein HGR_03097 [Hylemonella gracilis ATCC 19624]
Length = 255
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 13/210 (6%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSP-QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
GW +P +L+ L+ Q+P P + +IVL G+T + +P+ S +
Sbjct: 51 GWEPLPDAVLRQLE--AQQPAPDPLDLSRYAGVIVL--GGSTESSYVWEGHAQPALNSAA 106
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQ 153
E + Q ++ +GG+ + G +E+ +E GV + LE+
Sbjct: 107 ---ERLTAALPLLQREPRLVLLYTGGEGELLASGPSEAERARRFYVEQGVPPARLLLESA 163
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY---LNAY 210
S +T NA FS+++ + + +L++SA+H+ RS F+ G N +DY L
Sbjct: 164 SRNTHDNAVFSAALPGVDRTRPWLLITSAWHMPRSLRTFRKAGWNVTPWPTDYRAGLTTP 223
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ LS +LAL E +G+ RG
Sbjct: 224 WHQYSLSQGAAKWQLALHELLGLAAYRLRG 253
>gi|126737417|ref|ZP_01753152.1| hypothetical protein RSK20926_13319 [Roseobacter sp. SK209-2-6]
gi|126722002|gb|EBA18705.1| hypothetical protein RSK20926_13319 [Roseobacter sp. SK209-2-6]
Length = 197
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
P P+ + R + L+K+ K + C+ G KH +E+ V L G
Sbjct: 48 PGGEASPTLRR--RTLHGVALFKAGKISQLICS-----GGLGKHPPSEAAVMREICLAEG 100
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ D I LE +S T +N + ++I++ + +I++V+ YH R+ L +H G+ T+ S
Sbjct: 101 LPTDAILLEDRSHSTLENLTNAKALIEDPETTDIVIVTDHYHKWRALLTARHLGLRTRVS 160
Query: 203 CSD--------YLNAYYSIIPLSANFY 221
C L ++ IP A +Y
Sbjct: 161 CPSTTGTTWHRVLKSWLREIPALAYYY 187
>gi|241207055|ref|YP_002978151.1| hypothetical protein Rleg_4373 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860945|gb|ACS58612.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 262
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 108/266 (40%), Gaps = 40/266 (15%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIP--------------------TIL 45
+FLI + Q + FF+ LL + W I+ +L
Sbjct: 1 MFLISKLVWIFAQPLSLAFFLVFLALLAGLLRWRILSILGAAGSALILFVTLYTTAGNLL 60
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
++ L+ + +P P + +++LG G IE + R E +RL +
Sbjct: 61 MQGLEQRFAKPAADPDSLQ---CMIVLGGGFENEVNTARHGIEFN-GGADRFIEALRLAQ 116
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES--GVERDDIKLETQSLDTFQNAQF 163
Q I++SGGD G+ E ++ GV RD + E QS TF+NA
Sbjct: 117 KFPQ----SRILVSGGDGSMSGIYEGDAAASERFFPLFGVGRDRLIEERQSRTTFENAVN 172
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-------LNAYYSIIPL 216
+ + + N +L++S +H+ RS F+ GI+ +DY L ++ L
Sbjct: 173 TKEFLASQGLSNCLLITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRLGLDFTQPNL 232
Query: 217 SANFYLTELALKEYIGILIAYYRGNR 242
+A T A++E+ G L+ YY R
Sbjct: 233 NAQNMAT--AIREWYG-LVGYYLAGR 255
>gi|209964476|ref|YP_002297391.1| hypothetical protein RC1_1164 [Rhodospirillum centenum SW]
gi|209957942|gb|ACI98578.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 271
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 20/204 (9%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY 104
+L L+ + P P + DG IIVL G + P + A R +P+ ++ E +
Sbjct: 61 MLWSLESRFPSPATLPG-RVDG-IIVL---GGAVRPILTADRGQPALNEHA---ERLTEI 112
Query: 105 KSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
+ + I+ +GG + L E+ V G + + E +S +T++NA
Sbjct: 113 PALARRYPDARIVFTGGSGLVFEQDLKEAPVARAAWERMGFDTARVLFEQESRNTWENAL 172
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYL 222
S + ++G+ +LV+SA H+ RS F+ G N D+ S+ + F L
Sbjct: 173 LSRDLAHPVEGEAWLLVTSAMHMPRSVGIFRRIGWNVVPYPVDFHVPDRSLYRI--GFDL 230
Query: 223 TE------LALKEYIGILIAYYRG 240
T+ AL EYIG+++ YRG
Sbjct: 231 TDGLRSLSYALHEYIGLVV--YRG 252
>gi|187933235|ref|YP_001885962.1| hypothetical protein CLL_A1769 [Clostridium botulinum B str. Eklund
17B]
gi|187721388|gb|ACD22609.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund
17B]
Length = 253
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 98/203 (48%), Gaps = 33/203 (16%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFM----LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+I+ +H + Q K+FF CF+ ++ FI GI+ I ++ + S + K
Sbjct: 39 IILVLYHFIKQ---KLFFNRCFIKINKIIKFFICIGIVLFIAVEIVIISCPKS-----NK 90
Query: 64 KDGNIIVLLGNGTTIIPTIPAI---RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ + IV+LG G + I R++ + Q + + + + I++SG
Sbjct: 91 ENTDYIVVLGAGLNNGDQLSYILKSRLDSALQCIN-------------EFNNNSYIVVSG 137
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G ++E++ LLE G+ D+I +E +S +TF+N ++S +I+ KNI
Sbjct: 138 GKGNDERISEAMAMKKYLLEQGISEDEILMEDKSKNTFENFKYSKKIIEEHSNKNIDDLS 197
Query: 178 --LVSSAYHLKRSQLYFQHFGIN 198
+V++ +H RS++ + G N
Sbjct: 198 VKIVTTDFHGFRSKMLAKRNGYN 220
>gi|91793951|ref|YP_563602.1| hypothetical protein Sden_2600 [Shewanella denitrificans OS217]
gi|91715953|gb|ABE55879.1| protein of unknown function DUF218 [Shewanella denitrificans OS217]
Length = 264
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 40 IIPTILLKHLQFSY-------QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
++ +LL LQ S+ QR + Q + +++LG+G ++ + A + + S
Sbjct: 53 MLAIVLLSQLQISHLLGGSLEQRYSANHQAIQGECTVMVLGSGHSLTLGLSATQ-QLSPT 111
Query: 93 SYSRIFETMR---LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ +R+ E +R L + + C +++SG + + G + + V E GV + I
Sbjct: 112 ALARLVEGIRQLKLSEPTTEAPHSCRLVVSGWNGGREGASHAEVMALAAQELGVSKAQIT 171
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
++ DT + SM + M LV+SA H+ R+ + G+N +A+ S++L
Sbjct: 172 TFPEARDTIEELM---SMKQIMGEAPFRLVTSATHMSRAMRIARSLGLNPEAAPSNFLAG 228
Query: 210 YYSIIPLSA-NFYLTELALKEYIGIL 234
LSA N L++ +L EY+G+L
Sbjct: 229 DGYWWRLSADNLILSQASLHEYVGML 254
>gi|15644422|ref|NP_229474.1| hypothetical protein TM1674 [Thermotoga maritima MSB8]
gi|4982249|gb|AAD36741.1|AE001808_16 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 237
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 79/152 (51%), Gaps = 22/152 (14%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL-AESIVYNNKLLESGVERDDIKLETQS 154
R+ +++Y+ K I+++GG GL +E+++ + L+ GV + I +E +S
Sbjct: 98 RLLTGVQIYQKTK-----MPILVTGG--SLTGLRSEAMIMKDYLVSLGVPEEKITVEDRS 150
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY--- 211
+T++NA F+ I ++ IILV+ + H++R+ F+ F S + Y +Y
Sbjct: 151 RNTYENALFTREKIGDVP---IILVTDSIHMRRAVFTFKRF----FQSVTPYPAGFYFGD 203
Query: 212 ----SIIPLSANFYLTELALKEYIGILIAYYR 239
+P + +FYL A+ E+IG++ +R
Sbjct: 204 PEFVDFLPNATSFYLNSRAIYEWIGLVWYNFR 235
>gi|2194196|gb|AAB61133.1| GdmH [Staphylococcus gallinarum]
gi|86371663|gb|ABC94900.1| GdmH [Staphylococcus gallinarum]
Length = 330
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 30/184 (16%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
L + K + NI +L G+ +I ++ P QS RI + S K +
Sbjct: 147 SLFYSRRKVNNNIRYILVLGSGLIED----KVPPLLQS--RIDIGKNFFDSKKDADIK-- 198
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
++SGG + ++E+ N L+ GV + I E +S T++N QFS +IK + N
Sbjct: 199 FLLSGGQGKDERISEAQAMKNYLISQGVNENKIICENKSQSTYENLQFSKKLIK--KNTN 256
Query: 176 IILVSSAYHLKRS-----QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
I++ S+ +H+ R+ +L +QHF YS+ + N++ T ++E
Sbjct: 257 ILICSNNFHILRAVFIAKKLKYQHF---------------YSLGSKTKNYFFTNAFIREL 301
Query: 231 IGIL 234
I IL
Sbjct: 302 IAIL 305
>gi|118479923|ref|YP_897074.1| hypothetical protein BALH_4367 [Bacillus thuringiensis str. Al
Hakam]
gi|118419148|gb|ABK87567.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 350
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 28/181 (15%)
Query: 60 PQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P+ +D I++LG+G +P + A SRI + + Y + TII
Sbjct: 165 PRCNQD--FIIVLGSGLINDKVPPLLA----------SRIHKAIDFYWKQAAVNTPPTII 212
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK- 174
SGG GL E+ +E G+ + E +S++T+QN FS ++ ++ +GK
Sbjct: 213 FSGGQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKY 272
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I ++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I+
Sbjct: 273 RSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAIV 321
Query: 235 I 235
+
Sbjct: 322 V 322
>gi|168233410|ref|ZP_02658468.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168237094|ref|ZP_02662152.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168243758|ref|ZP_02668690.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194447573|ref|YP_002044982.1| hypothetical protein SeHA_C1088 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194472169|ref|ZP_03078153.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194737227|ref|YP_002114042.1| hypothetical protein SeSA_A1104 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194405877|gb|ACF66096.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194458533|gb|EDX47372.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194712729|gb|ACF91950.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197289831|gb|EDY29192.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|205332431|gb|EDZ19195.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205337158|gb|EDZ23922.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 258
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F +GW + + L+ + RP+ + P W+ + IV+LG G T P +
Sbjct: 41 VFISVGWLALLLLSLQPVSDHLLRPIENRYPTWQGPQKVEYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL+++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLAEGIRLWRA----NPGARLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R DI +LD ++ + ++ +K G +LV+SA HL R+ ++FQH G+N +
Sbjct: 152 PRSDII----TLDKPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQHAGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ A E +G L + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|238913237|ref|ZP_04657074.1| hypothetical protein SentesTe_19229 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 258
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F +GW + + L+ + RP+ + P W+ + IV+LG G T P +
Sbjct: 41 VFISVGWLALLLLSLQPVSDHLLRPIENRYPTWQGPQKVEYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL+++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLAEGIRLWRA----NPGAKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R DI +LD ++ + ++ +K G +LV+SA HL R+ ++FQH G+N +
Sbjct: 152 PRSDII----TLDKPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQHAGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ A E +G L + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|218133156|ref|ZP_03461960.1| hypothetical protein BACPEC_01018 [Bacteroides pectinophilus ATCC
43243]
gi|217992029|gb|EEC58033.1| hypothetical protein BACPEC_01018 [Bacteroides pectinophilus ATCC
43243]
Length = 256
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
+C + CTII++GG + + E+ L E G+ D I +E +S DT N + S
Sbjct: 125 ACSEDGKECTIIVAGGKGKGESVTEAFAMKRYLTEKGINPDRILMEDKSTDTQLNIKLSR 184
Query: 166 SMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTEL 225
+ + ++++ SS++H+ R+ K + + LN + S L
Sbjct: 185 ELYIDDTASDVVIASSSFHIFRA----------LKLANAQGLNNVQGLAAPSNKILLVNY 234
Query: 226 ALKEYIGILIAYYRGN 241
L+E +GI GN
Sbjct: 235 MLREAVGITKEIVFGN 250
>gi|196043859|ref|ZP_03111096.1| conserved domain protein [Bacillus cereus 03BB108]
gi|225866795|ref|YP_002752173.1| hypothetical protein BCA_4930 [Bacillus cereus 03BB102]
gi|229187061|ref|ZP_04314210.1| hypothetical protein bcere0004_46000 [Bacillus cereus BGSC 6E1]
gi|196025195|gb|EDX63865.1| conserved domain protein [Bacillus cereus 03BB108]
gi|225789384|gb|ACO29601.1| conserved domain protein [Bacillus cereus 03BB102]
gi|228596370|gb|EEK54041.1| hypothetical protein bcere0004_46000 [Bacillus cereus BGSC 6E1]
Length = 344
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 28/181 (15%)
Query: 60 PQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P+ +D I++LG+G +P + A SRI + + Y + TII
Sbjct: 159 PRCNQD--FIIVLGSGLINDKVPPLLA----------SRIHKAIDFYWKQAAVNTPPTII 206
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGK- 174
SGG GL E+ +E G+ + E +S++T+QN FS ++ ++ +GK
Sbjct: 207 FSGGQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKY 266
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I ++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I+
Sbjct: 267 RSIFTTNNFHLFRAGIYARQAGLNSQGIGSK-----------TAFYYWPNAMIREYVAIV 315
Query: 235 I 235
+
Sbjct: 316 V 316
>gi|16764350|ref|NP_459965.1| hypothetical protein STM0990 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161614771|ref|YP_001588736.1| hypothetical protein SPAB_02523 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167994940|ref|ZP_02576030.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168263514|ref|ZP_02685487.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168466584|ref|ZP_02700446.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|16419502|gb|AAL19924.1| putative KicA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|161364135|gb|ABX67903.1| hypothetical protein SPAB_02523 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|195630934|gb|EDX49520.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|205327272|gb|EDZ14036.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205347829|gb|EDZ34460.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|261246206|emb|CBG24010.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992729|gb|ACY87614.1| hypothetical protein STM14_1120 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157533|emb|CBW17023.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911976|dbj|BAJ35950.1| hypothetical protein STMDT12_C10070 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321223313|gb|EFX48382.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323129255|gb|ADX16685.1| hypothetical protein STM474_0976 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|332987881|gb|AEF06864.1| hypothetical protein STMUK_0956 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 258
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F +GW + + L+ + RP+ + P W+ + IV+LG G T P +
Sbjct: 41 VFISVGWLALLLLSLQPVSDHLLRPIENRYPTWQGPQKVEYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL+++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLAEGIRLWRA----NPGARLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R DI +LD ++ + ++ +K G +LV+SA HL R+ ++FQH G+N +
Sbjct: 152 PRSDII----TLDKPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQHAGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ A E +G L + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|167553009|ref|ZP_02346759.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205322470|gb|EDZ10309.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 258
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F +GW + + L+ + RP+ + P W+ + IV+LG G T P +
Sbjct: 41 VFISVGWLALLLLSLQPVSDHLLRPIENRYPTWQGPQKVEYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL+++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLAEGIRLWRA----NPGARLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R DI +LD ++ + ++ +K G +LV+SA HL R+ ++FQH G+N +
Sbjct: 152 PRSDII----TLDKPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQHAGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ A E +G L + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|227544579|ref|ZP_03974628.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A]
gi|300910291|ref|ZP_07127751.1| conserved hypothetical protein [Lactobacillus reuteri SD2112]
gi|227185458|gb|EEI65529.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A]
gi|300892939|gb|EFK86299.1| conserved hypothetical protein [Lactobacillus reuteri SD2112]
Length = 271
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 102 RLYKS--CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL K+ C + II+SGG QK +E+ V L+ G+ I E ++L+T+Q
Sbjct: 128 RLDKAINCWKTHQSAKIIVSGGIVQKAKESEAEVMAAYLIAHGIPARKIIRENKALNTWQ 187
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
N F+S +IK + +++V+S +H+ R++ Y + G+N
Sbjct: 188 NLAFASQLIKPQE--TVVVVTSDFHVLRARAYARKMGLN 224
>gi|16759859|ref|NP_455476.1| hypothetical protein STY0992 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142368|ref|NP_805710.1| hypothetical protein t1944 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213052381|ref|ZP_03345259.1| hypothetical protein Salmoneentericaenterica_05289 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213424605|ref|ZP_03357388.1| hypothetical protein SentesTyphi_02341 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213581562|ref|ZP_03363388.1| hypothetical protein SentesTyph_10282 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213613211|ref|ZP_03371037.1| hypothetical protein SentesTyp_12289 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213650532|ref|ZP_03380585.1| hypothetical protein SentesTy_26823 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213857895|ref|ZP_03384866.1| hypothetical protein SentesT_22570 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|25347649|pir||AD0615 probable membrane protein STY0992 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16502152|emb|CAD05390.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137998|gb|AAO69559.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 258
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F +GW + + L+ + RP+ + P W+ + IV+LG G T P +
Sbjct: 41 VFISVGWLALLLLSLQPVSDHLLRPIENRYPTWQGPQKVEYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL+++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLAEGIRLWRA----NPGARLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R DI +LD ++ + ++ +K G +LV+SA HL R+ ++FQH G+N +
Sbjct: 152 PRSDII----TLDKPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQHAGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ A E +G L + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|146284078|ref|YP_001174231.1| transmembrane protein [Pseudomonas stutzeri A1501]
gi|145572283|gb|ABP81389.1| probable transmembrane protein [Pseudomonas stutzeri A1501]
Length = 257
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 18/218 (8%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRP-LLSPQWKK---DGNIIVLLGNGTTIIPTIP 83
CF+ F+ + +P ++ + + P L+ +W + IV+LG G P
Sbjct: 38 CFVTGFTGLWLMSLPIVVEWTARAVEREPALVEARWSQLSGQAGAIVVLGAGREQ--NDP 95
Query: 84 AIR-IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
A +P + + R+ RL K+ I+ SGG +E+++ ++L+
Sbjct: 96 AWGGDQPGYTALERLRYAARLAKASG-----LPILTSGGLHYGQPPSEAML-GAEVLQRD 149
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
LE +S T++NA FS+ M++ + ++LV+SA H+ RS+ F+ GI A+
Sbjct: 150 FGVATRWLEERSRTTWENALFSAEMLRAAGVERVVLVTSAAHMPRSRWCFEQNGIEVIAA 209
Query: 203 CSDYLNAYYS-----IIPLSANFYLTELALKEYIGILI 235
++ + + +P S F+ L L E +G+ +
Sbjct: 210 PVGFMGGHNARPLDGWLPESKAFWQNGLLLNEVVGMAV 247
>gi|327482395|gb|AEA85705.1| transmembrane protein [Pseudomonas stutzeri DSM 4166]
Length = 257
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 18/218 (8%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRP-LLSPQWKK---DGNIIVLLGNGTTIIPTIP 83
CF+ F+ + +P ++ + + P L+ +W + IV+LG G P
Sbjct: 38 CFVTGFTGLWLMSLPIVVEWTARAVEREPALVEARWSQLSGQAGAIVVLGAGREQ--NDP 95
Query: 84 AIR-IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
A +P + + R+ RL K+ I+ SGG +E+++ ++L+
Sbjct: 96 AWGGDQPGYTALERLRYAARLAKASG-----LPILTSGGLHYGQPPSEAML-GAEVLQRD 149
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
LE +S T++NA FS+ M++ + ++LV+SA H+ RS+ F+ GI A+
Sbjct: 150 FGVATRWLEERSRTTWENALFSAEMLRAAGVERVVLVTSAAHMPRSRWCFEQNGIEVIAA 209
Query: 203 CSDYLNAYYS-----IIPLSANFYLTELALKEYIGILI 235
++ + + +P S F+ L L E +G+ +
Sbjct: 210 PVGFMGGHNARPLNGWLPESKAFWQNGLLLNEVVGMAV 247
>gi|312864360|ref|ZP_07724593.1| putative membrane protein [Streptococcus downei F0415]
gi|311100081|gb|EFQ58292.1| putative membrane protein [Streptococcus downei F0415]
Length = 338
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+K+ + +++LG+G P + SRI + + +Y Q C +I+SGG
Sbjct: 163 FKRPIDYVLVLGSGLMGDKVTPLLA--------SRIKKGIEIY----QKHPDCRLILSGG 210
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ +AE L GV DI +E +S +T +N QFSS ++ N N+ +V++
Sbjct: 211 QGKDELIAEGQAMAKYALSQGVPEKDIIIEDRSKNTRENLQFSSHLMAN--KANLAIVTN 268
Query: 182 AYHLKRSQLYFQHFGI-----NTKASCSDYLNAY 210
YHL R+ L + GI K LNAY
Sbjct: 269 YYHLFRALLIARDLGIPCIGYGAKTKFYFSLNAY 302
>gi|313638523|gb|EFS03686.1| integral membrane protein [Listeria seeligeri FSL S4-171]
Length = 344
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 81/179 (45%), Gaps = 20/179 (11%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGG 121
+ + + +++LG+G I R+ P S R+ + Y K + T I+SGG
Sbjct: 160 RNNQDFLIVLGSGL-----IGGDRVPPLLAS--RLDRAIAFYEKQLAKKGKRATFIVSGG 212
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNIILVS 180
++E+ L+ G+E I +E +S++T QN QFS M M N + +
Sbjct: 213 KGDNETISEAEAMRGYLISKGIEETFIIMENKSVNTLQNMQFSKKKMDAIMPEYNSLFST 272
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL R+ LY + G+ ++ + +A +Y+ ++E+I + Y +
Sbjct: 273 NNFHLFRASLYARKAGLKSQGIGAK-----------TALYYMPNALIREFIATIFMYKK 320
>gi|194468048|ref|ZP_03074034.1| protein of unknown function DUF218 [Lactobacillus reuteri 100-23]
gi|194452901|gb|EDX41799.1| protein of unknown function DUF218 [Lactobacillus reuteri 100-23]
Length = 271
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 102 RLYKS--CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL K+ C + II+SGG QK +E+ V L+ G+ I E ++L+T+Q
Sbjct: 128 RLDKAINCWKTHQSAKIIVSGGIVQKAKESEAEVMAAYLIAHGIPARKIIRENKALNTWQ 187
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
N F+S +IK + +++V+S +H+ R++ Y + G+N
Sbjct: 188 NLAFASQLIKPQE--TVVVVTSDFHVLRARAYARKMGLN 224
>gi|62179518|ref|YP_215935.1| hypothetical protein SC0948 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|198245262|ref|YP_002214914.1| hypothetical protein SeD_A1055 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389922|ref|ZP_03216533.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205352197|ref|YP_002225998.1| hypothetical protein SG0932 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856381|ref|YP_002243032.1| hypothetical protein SEN0894 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224582800|ref|YP_002636598.1| hypothetical protein SPC_0991 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|62127151|gb|AAX64854.1| putative KicA protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|197939778|gb|ACH77111.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199602367|gb|EDZ00913.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205271978|emb|CAR36822.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708184|emb|CAR32477.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224467327|gb|ACN45157.1| hypothetical protein SPC_0991 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322713985|gb|EFZ05556.1| Uncharacterized protein ycbC [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|326622667|gb|EGE29012.1| hypothetical protein SD3246_1028 [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326627241|gb|EGE33584.1| hypothetical protein SG9_0953 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 258
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F +GW + + L+ + RP+ + P W+ + IV+LG G T P +
Sbjct: 41 VFISVGWLALLLLSLQPVSDHLLRPIENRYPTWQGPQKVEYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL+++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLAEGIRLWRA----NPGARLIFTGGIAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R DI +LD ++ + ++ +K G +LV+SA HL R+ ++FQH G+N +
Sbjct: 152 PRSDII----TLDKPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQHAGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ A E +G L + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|149197614|ref|ZP_01874664.1| hypothetical protein LNTAR_20313 [Lentisphaera araneosa HTCC2155]
gi|149139184|gb|EDM27587.1| hypothetical protein LNTAR_20313 [Lentisphaera araneosa HTCC2155]
Length = 247
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG---G 121
D I +LG+G + P ++ S + SR+ E +R KQ + I G
Sbjct: 77 DAKYIAVLGSGHSSQKHWPD-SLKLSRTARSRLMEGLR----QKQLNPEAKFIFFGFGVN 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
Q HG + + GV +DI Q DT + AQF+ + + ++LV+
Sbjct: 132 GKQPHGE----IMTQAAISLGVNPEDISFSVQPRDTNEEAQFAKEVCGT---EKLLLVTD 184
Query: 182 AYHLKRSQLYFQHFGIN---TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
A H R+ F+ +G+N T A+ Y +A++ +P + LT ++ EY+G++
Sbjct: 185 ATHTPRAMKLFKSYGLNVFATPANYESYGDAWFVPMPSAEALELTRKSIYEYVGLI 240
>gi|331004989|ref|ZP_08328398.1| hypothetical protein IMCC1989_103 [gamma proteobacterium IMCC1989]
gi|330421202|gb|EGG95459.1| hypothetical protein IMCC1989_103 [gamma proteobacterium IMCC1989]
Length = 144
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 14/129 (10%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG+ + + L++ + D E +S +T++NA F+ M+ +
Sbjct: 15 VIVSGGNVRSFDVVSEADMGVYFLQNELNVDIAWPEGESRNTWENAHFTKKMLDKQSIHH 74
Query: 176 IILVSSAYHLKRSQLYFQHFGINT----------KASCSDYLNAYYSIIPLSANFYLTEL 225
+ LV+ AYH+ RS FQ G+ ++S S +LN +P + +++ L
Sbjct: 75 VALVTHAYHMPRSVYAFQQAGLTVSPMPTGQLSQQSSTSYWLN----WLPSAGALHISRL 130
Query: 226 ALKEYIGIL 234
AL EY+G+L
Sbjct: 131 ALHEYLGLL 139
>gi|188534261|ref|YP_001908058.1| hypothetical protein ETA_21340 [Erwinia tasmaniensis Et1/99]
gi|188029303|emb|CAO97180.1| Conserved hypothetical protein YcbC [Erwinia tasmaniensis Et1/99]
Length = 262
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 26/183 (14%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
IV+LG G T P + PS S R+ E +R++ + +I +GG Q
Sbjct: 82 IVVLGGGYTWNP-----QWAPSSNMLNNSLPRLAEGIRIW----HENPRAKLIFTGGKAQ 132
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ L+ + V N G+ + + + DT Q A + ++ N + LV+SA H
Sbjct: 133 GNPLSSAAVTANTARSLGIPDGAMIILDRPRDTEQEAHEVAKIVTN---RPFALVTSANH 189
Query: 185 LKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYL--TELALKEYIGILIA 236
L R+ LYFQ G+ + ++ LN + ++P S F+L +E AL E IG +
Sbjct: 190 LPRAMLYFQQEGLQPWPAPANQLAIASPLNLWERVLPSS--FWLGHSERALYESIGRMWQ 247
Query: 237 YYR 239
+ +
Sbjct: 248 WLK 250
>gi|313633948|gb|EFS00656.1| integral membrane protein [Listeria seeligeri FSL N1-067]
Length = 344
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 22/182 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIII 118
P++ +D +++LG+G I R+ P S R+ + Y K + T I+
Sbjct: 159 PRYNQD--FLIVLGSGL-----IGGDRVPPLLAS--RLDRAIAFYEKQLAKKGKRATFIV 209
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNII 177
SGG ++E+ L+ G++ I +E +S++T QN QFS M M N +
Sbjct: 210 SGGQGDNEIISEAEAMRGYLISKGIDETFIIMENKSVNTLQNMQFSKKKMDAIMPEYNSL 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ LY + G+ ++ + +A +Y+ ++E+I + Y
Sbjct: 270 FSTNNFHLFRASLYARKAGLKSQGIGAK-----------TALYYMPNALIREFIATIFMY 318
Query: 238 YR 239
+
Sbjct: 319 KK 320
>gi|229035448|ref|ZP_04189344.1| hypothetical protein bcere0028_54330 [Bacillus cereus AH1271]
gi|228727867|gb|EEL78947.1| hypothetical protein bcere0028_54330 [Bacillus cereus AH1271]
Length = 176
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
SRI + + Y + + I SGG ++E+ +E G+ + + E QS
Sbjct: 17 SRINKGIEFYHRQAEVTSPPIFIFSGGQGADELVSEAHAMQAYAVEKGIPIEHTRKEDQS 76
Query: 155 LDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
++T+QN FS ++ +++G N I ++ +HL R+ L+ + G+N++ S
Sbjct: 77 VNTYQNMLFSKRIMDSLKGATYNSIFTTNNFHLFRAGLFAKQSGLNSQGIGSK------- 129
Query: 213 IIPLSANFYLTELALKEYIGILIAYYR 239
+A +Y ++EYI +++ Y++
Sbjct: 130 ----TAFYYWPNAMIREYIAVVVMYHK 152
>gi|197265841|ref|ZP_03165915.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197244096|gb|EDY26716.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
Length = 258
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 60 PQWKKDGNI--IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIFETMRLYKSCKQHSMH 113
P W+ + IV+LG G T P + PS S R+ E +RL+++ +
Sbjct: 71 PTWQGPQKVEYIVVLGGGYTWNP-----QWAPSSNLINNSLPRLAEGIRLWRA----NPG 121
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I +GG + + ++ + V GV R DI +LD ++ + ++ +K G
Sbjct: 122 ARLIFTGGVAKTNTVSTAEVGARVAQSLGVPRSDII----TLDKPKDTEEEAAAVKQAIG 177
Query: 174 K-NIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELA 226
+LV+SA HL R+ ++FQH G+N + ++ LN + IP ++ A
Sbjct: 178 DAPFLLVTSASHLPRAMIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRA 237
Query: 227 LKEYIGILIAYYRG 240
E +G L + +G
Sbjct: 238 GYETLGRLWQWLKG 251
>gi|170288947|ref|YP_001739185.1| hypothetical protein TRQ2_1158 [Thermotoga sp. RQ2]
gi|170176450|gb|ACB09502.1| protein of unknown function DUF218 [Thermotoga sp. RQ2]
Length = 237
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%), Gaps = 25/197 (12%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
+S ++ L P + +IV+LG G + S + R+ +++Y+ K
Sbjct: 56 WSLEKNLDVPATLPNDAVIVVLGGG---VERNTKAGDNLSDATLRRLLTGVQIYQKTK-- 110
Query: 111 SMHCTIIISGGDPQKHGL-AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
I+++GG GL E+++ + L+ GV + I +E +S +T++NA F+ I
Sbjct: 111 ---MPILVTGG--SLTGLRPEAMIMKDYLVSLGVPEEKITVEDRSRNTYENAFFTREKIG 165
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY-------SIIPLSANFYL 222
++ IILV+ + H++R+ F+ F S + Y +Y +P + +FYL
Sbjct: 166 DVP---IILVTDSIHMRRAVFTFKSF----FQSVTPYPAGFYFGDPEFVDFLPNATSFYL 218
Query: 223 TELALKEYIGILIAYYR 239
A+ E+IG++ +R
Sbjct: 219 NSRAIYEWIGLVWYNFR 235
>gi|283455426|ref|YP_003359990.1| hypothetical protein BDP_0493 [Bifidobacterium dentium Bd1]
gi|283102060|gb|ADB09166.1| hypothetical protein BDP_0493 [Bifidobacterium dentium Bd1]
Length = 346
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
+Q TII SGG ++ES N LL GV I LE +S T +N +FS ++
Sbjct: 198 EQGGRRATIITSGGQGHDEVISESRAMANYLLSQGVPESSILLEDKSSTTEENLKFSHAI 257
Query: 168 IKNMQG-KNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ G + + +S+YH R+ ++ + GIN ASC
Sbjct: 258 MDARGGAAHCTIATSSYHCLRAAMFARRLGIN--ASC 292
>gi|192291940|ref|YP_001992545.1| hypothetical protein Rpal_3570 [Rhodopseudomonas palustris TIE-1]
gi|192285689|gb|ACF02070.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
TIE-1]
Length = 264
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 60 PQWKKDGNI---IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P W + G I++LG ++ +E S R+ + L + + I
Sbjct: 70 PPWHEAGRAPDGIIVLGGAIDSELSVARNTLEVD-ASAERVLAALDLARRYPK----ARI 124
Query: 117 IISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+ SGG + +AE+ + L G+ D + LE +S T +NA ++ +++ G+
Sbjct: 125 VYSGGSGNLIQRSVAEAPLAGELLERFGLASDRLVLEDKSRTTAENAAYTRALVVPKPGE 184
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKE 229
+LV+SA+H+ RS + F+ G + D+ +A + L+A T++A+ E
Sbjct: 185 LWLLVTSAFHMPRSIIAFRAAGFDVVPYPVDWRTRGSEDAARTFSTLAAGLARTDVAVHE 244
Query: 230 YIGILIAYYRGNR 242
+ G L+AY G +
Sbjct: 245 WAG-LLAYRLGGK 256
>gi|309802755|ref|ZP_07696859.1| putative membrane protein [Bifidobacterium dentium JCVIHMP022]
gi|308220819|gb|EFO77127.1| putative membrane protein [Bifidobacterium dentium JCVIHMP022]
Length = 346
Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
+Q TII SGG ++ES N LL GV I LE +S T +N +FS ++
Sbjct: 198 EQGGRRATIITSGGQGHDEVISESRAMANYLLSQGVPESSILLEDKSSTTEENLKFSHAI 257
Query: 168 IKNMQG-KNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ G + + +S+YH R+ ++ + GIN ASC
Sbjct: 258 MDARGGAAHCTIATSSYHCLRAAMFARRLGIN--ASC 292
>gi|306823505|ref|ZP_07456880.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
gi|304553212|gb|EFM41124.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
Length = 348
Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
+Q TII SGG ++ES N LL GV I LE +S T +N +FS ++
Sbjct: 200 EQGGRRATIITSGGQGHDEVISESRAMANYLLSQGVPESSILLEDKSSTTEENLKFSHAI 259
Query: 168 IKNMQG-KNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ G + + +S+YH R+ ++ + GIN ASC
Sbjct: 260 MDARGGAAHCTIATSSYHCLRAAMFARRLGIN--ASC 294
>gi|268608564|ref|ZP_06142291.1| hypothetical protein RflaF_03567 [Ruminococcus flavefaciens FD-1]
Length = 254
Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 22/220 (10%)
Query: 1 MLLSWIFLIVSYWH----LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
ML+S + ++ +H L SI + F++L S + G I +L L S R
Sbjct: 35 MLVSAVLTVIFVFHGRFTSLVSSIWEKPVGKVFIVLISLLMAGGI--VLASVLSVSMARE 92
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ P +D ++VL G + P++ + + YK H C +
Sbjct: 93 MNDPPQNEDTTLVVL---GCKVKDGRPSLMLSRRLNAA---------YKYMSGHETVCAV 140
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKN 175
+ SGG ++E+ L E G++ I +E +S T +N +FS +I +N +
Sbjct: 141 V-SGGQGSDEVMSEAECMKIYLTEKGIDPQRIFMEDKSTTTKENLEFSKKLIAENGLPQK 199
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
+ LV+ +H R+++ + GI++ + S Y + Y I+P
Sbjct: 200 VTLVTDGFHQLRAEMLAEKTGISSPYNISGYTSWY--IVP 237
>gi|255036862|ref|YP_003087483.1| hypothetical protein Dfer_3103 [Dyadobacter fermentans DSM 18053]
gi|254949618|gb|ACT94318.1| protein of unknown function DUF218 [Dyadobacter fermentans DSM
18053]
Length = 256
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ +T LYK+ K + T S D E+ L++ GV DI E ++
Sbjct: 104 DRVLQTFLLYKAGKIRKILITGA-SADDAMAGKRGETKTAAALLVQWGVPAGDIVFEEKA 162
Query: 155 LDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
+T QNA S+ +++ M GK IL++SA+H++RS F+ GI TK +D+ Y
Sbjct: 163 KNTRQNALNSAQILRKMFPSGK-YILITSAFHMRRSVGCFEKAGIKTKPFPADFYGGY 219
>gi|257869611|ref|ZP_05649264.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
gi|257803775|gb|EEV32597.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
Length = 356
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 29/181 (16%)
Query: 60 PQWKKDGNIIVLLG----NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
P++ +D I++LG NG + P + A RI+ + Y F R K+ + M
Sbjct: 169 PRYDQD--FIIVLGAGLLNGEKVSPLL-AQRIDKAIAFYHLQF---RAKKTAPRFLM--- 219
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QG 173
SGG + E++ + G+ +I +E S T++N +FS ++ ++ +G
Sbjct: 220 ---SGGQGSDEKIPEAVAMKEYAVSQGIPESEILVEANSTTTYENMKFSKEIMDSLRPEG 276
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ I VS+ YH+ R+ +Y ++ KA A+Y YL L+EYI I
Sbjct: 277 YHAIFVSNNYHIFRAGMYADQ--VHVKADGIGSHTAFY---------YLPNAFLREYIAI 325
Query: 234 L 234
L
Sbjct: 326 L 326
>gi|271500774|ref|YP_003333799.1| hypothetical protein Dd586_2243 [Dickeya dadantii Ech586]
gi|270344329|gb|ACZ77094.1| protein of unknown function DUF218 [Dickeya dadantii Ech586]
Length = 259
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 27/195 (13%)
Query: 60 PQWKKD---GNIIVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIFETMRLYKSCKQHSM 112
P W D N IV+LG G T P P PS S +R+ E +RL+++ +
Sbjct: 71 PTWTPDFPKVNYIVVLGGGYTFNPDWP-----PSANLINNSLARVTEGIRLWRANPGAKL 125
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
T + G+P S ++ ES GV DI L ++ DT + A + ++I
Sbjct: 126 IFTGAAAQGNP-----VTSASTAARVAESLGVPAQDILLVDKARDTEEEAAGTEALIGK- 179
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGIN------TKASCSDYLNAYYSIIPLSANFYLTEL 225
+ +LV+SA HL R+ +FQ G++ + + + LN + + P + +E
Sbjct: 180 --QPFLLVTSANHLPRAIRFFQARGLHPIPAPANQLAITSPLNPWERVFPSALYLSHSER 237
Query: 226 ALKEYIGILIAYYRG 240
A E +G++ +G
Sbjct: 238 AWYEGLGLIWQQMKG 252
>gi|171741210|ref|ZP_02917017.1| hypothetical protein BIFDEN_00283 [Bifidobacterium dentium ATCC
27678]
gi|171276824|gb|EDT44485.1| hypothetical protein BIFDEN_00283 [Bifidobacterium dentium ATCC
27678]
Length = 348
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
+Q TII SGG ++ES N LL GV I LE +S T +N +FS ++
Sbjct: 200 EQGGRRATIITSGGQGHDEVISESRAMANYLLSQGVPESSILLEDKSSTTEENLKFSHAI 259
Query: 168 IKNMQG-KNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ G + + +S+YH R+ ++ + GIN ASC
Sbjct: 260 MDARGGAAHCTIATSSYHCLRAAMFARRLGIN--ASC 294
>gi|194334537|ref|YP_002016397.1| hypothetical protein Paes_1732 [Prosthecochloris aestuarii DSM 271]
gi|194312355|gb|ACF46750.1| protein of unknown function DUF218 [Prosthecochloris aestuarii DSM
271]
Length = 250
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 80/178 (44%), Gaps = 13/178 (7%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ +V+LG G T+ +P +R + R + +++ K + T P
Sbjct: 73 DAVVVLG-GVTV--QVPGVRYGEWGDAADRFEGGVEVFRGGKAPLLVLTGAKMPWAPDAR 129
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E + + L GV + +++ + +T A+ ++ + +ILV+SA+H++
Sbjct: 130 --VEGELLRERALLLGVPEESVRVTGRVGNTADEAREVRKLLAGIARPRVILVTSAFHMR 187
Query: 187 RSQLYFQHFGINTKASCSDYLNAYY------SIIPLSANFYLTELALKEYIGILIAYY 238
R+ + F+H G+ D+ ++Y +P + +ELA++E IG L YY
Sbjct: 188 RAAMLFRHAGLRVDEFPVDFRTSFYDRLTVIDFLPCADGLENSELAIREMIGWL--YY 243
>gi|218667128|ref|YP_002426951.1| hypothetical protein AFE_2571 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|218519341|gb|ACK79927.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 266
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 102/240 (42%), Gaps = 22/240 (9%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L W+ IV + +L ++ + L+ F I +LL L+ Y PL P
Sbjct: 28 LGWLAEIVGWRYL-----GRVLMLLALGTLY-FFSTAIGARLLLLPLEDRYP-PLTKPLH 80
Query: 63 KKD-GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK-QHSMHCTIIISG 120
D I++LG G + + S Q + +RL + + II SG
Sbjct: 81 GADTPQAIIVLGGGEVM-------QSPGSNQETANARTLVRLLAAAQLARQTGLPIIPSG 133
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P+ AE++ L + + I ETQS +T NA S++++ G LV+
Sbjct: 134 GAPRLGAPAEALTMEFILRQDLGVQSTIWPETQSYNTAANATDSAAILAEHHGHQAYLVT 193
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDY----LNAYY--SIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ +F+ G+ +DY +N S +P + ++ A EY+G+L
Sbjct: 194 SALHMPRAVAWFRRAGVKVVPVPTDYRLDRVNGLRLESWLPRAIYLEISSEASHEYLGLL 253
>gi|306841899|ref|ZP_07474579.1| Hypothetical protein BIBO2_1680 [Brucella sp. BO2]
gi|306288029|gb|EFM59431.1| Hypothetical protein BIBO2_1680 [Brucella sp. BO2]
Length = 205
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 11/155 (7%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKL 150
+ RI ETMRL + II+SGG+ + E+ L + G D
Sbjct: 46 AADRIVETMRLARLYPD----AKIIVSGGEGTFFEKSAREAETTRALLSDLGFSGDRYIF 101
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E +S +T +NA FS ++ G+ +LV+SAYH+ R+ F+ G + A DY
Sbjct: 102 EGKSRNTVENAIFSQALALPKPGETWLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRT 161
Query: 211 YSIIPL---SANFYLTE--LALKEYIGILIAYYRG 240
L S N L+ +AL+E+ G+ ++ G
Sbjct: 162 RETFGLYLESPNDALSRFSMALREWTGLAAYWWTG 196
>gi|220935563|ref|YP_002514462.1| integral membrane protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219996873|gb|ACL73475.1| integral membrane protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 250
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 26/210 (12%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS- 95
G G + LL L++ Y P P+ +I+VL G P + + S++
Sbjct: 50 GSGPVAHALLGGLEYRYPAPENMPELD---HIVVLAAYGAHD----PRVSVINQVNSHAL 102
Query: 96 -RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ E L ++H + GG+ K + + L+ GV I++E S
Sbjct: 103 IRLVEASLL---AREHPEAILTVTGGGEVPK-------LMADVLIVLGVPESRIRVEALS 152
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY---- 210
+TF++A + +K+ + LV+SA H+ R+ + F+ G+ + +DYL+
Sbjct: 153 SNTFESALHLQAELKD---QRFALVTSAGHMSRAMMVFRGQGLEPIPAPTDYLSFADIWS 209
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYRG 240
I+ N L++LA+ EYI ++ +RG
Sbjct: 210 AQIMAKPGNLLLSDLAIHEYIALVWYRWRG 239
>gi|90579519|ref|ZP_01235328.1| hypothetical protein VAS14_01116 [Vibrio angustum S14]
gi|90439093|gb|EAS64275.1| hypothetical protein VAS14_01116 [Vibrio angustum S14]
Length = 275
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 23/239 (9%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQ 61
LI+ + LL + ++ ++ FSF+G + + T LL+ L+ Y + S
Sbjct: 18 LLIIGFIGLLVLWFTRNKKLASGIIAFSFLGIFAVSFQPVSTSLLRPLEQQYPAFVGS-- 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K N +++LGN I T P I E S + R+ E +R+ + M + G
Sbjct: 76 -SKPINFVMVLGNSHVIDKTFP-ITSELSRTALMRLVEGIRIARMYPGSKMILSGYGGGT 133
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D ++ + + L GV + DI L + DT++ A ++S++ + KN++LV+S
Sbjct: 134 D-----ISHARMMAKVALALGVSKSDILLLETAKDTWEEAHQAASVVGD---KNLVLVTS 185
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYIGIL 234
A H+ R+ F G+N + +++L + + P S Y TE E +G L
Sbjct: 186 ASHMSRALYEFHQAGLNPIPAPTNFLASNKIKQPWIRYAPSSQFLYQTERYWHEKLGSL 244
>gi|307130843|ref|YP_003882859.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Dickeya dadantii 3937]
gi|306528372|gb|ADM98302.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Dickeya dadantii 3937]
Length = 259
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 27/195 (13%)
Query: 60 PQWKKD---GNIIVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIFETMRLYKSCKQHSM 112
P W D N IV+LG G T P P PS + +R+ E +RL+++ +
Sbjct: 71 PAWTPDFPKVNYIVVLGGGYTFNPDWP-----PSANLINNNLARVTEGIRLWRANPGARL 125
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
T + G+P + + ++ ES GV DI L Q+ DT + A + +++
Sbjct: 126 IFTGAAAQGNPVTNASTAA-----RVAESLGVPAQDILLVDQARDTEEEAAGTEALVGK- 179
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGIN------TKASCSDYLNAYYSIIPLSANFYLTEL 225
+ +LV+SA HL R+ +FQ G++ + + + LN + + P + +E
Sbjct: 180 --QPFLLVTSANHLPRAIRFFQARGLHPIPAPANQLAITSPLNPWERVFPSALYLSHSER 237
Query: 226 ALKEYIGILIAYYRG 240
A E +G++ +G
Sbjct: 238 AWYEGLGLIWQQMKG 252
>gi|198284290|ref|YP_002220611.1| hypothetical protein Lferr_2201 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|198248811|gb|ACH84404.1| protein of unknown function DUF218 [Acidithiobacillus ferrooxidans
ATCC 53993]
Length = 264
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 102/240 (42%), Gaps = 22/240 (9%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L W+ IV + +L ++ + L+ F I +LL L+ Y PL P
Sbjct: 26 LGWLAEIVGWRYL-----GRVLMLLALGTLY-FFSTAIGARLLLLPLEDRYP-PLTKPLH 78
Query: 63 KKD-GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK-QHSMHCTIIISG 120
D I++LG G + + S Q + +RL + + II SG
Sbjct: 79 GADTPQAIIVLGGGEVM-------QSPGSNQETANARTLVRLLAAAQLARQTGLPIIPSG 131
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P+ AE++ L + + I ETQS +T NA S++++ G LV+
Sbjct: 132 GAPRLGAPAEALTMEFILRQDLGVQSTIWPETQSYNTAANATDSAAILAEHHGHQAYLVT 191
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDY----LNAYY--SIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ +F+ G+ +DY +N S +P + ++ A EY+G+L
Sbjct: 192 SALHMPRAVAWFRRAGVKVVPVPTDYRLDRVNGLRLESWLPRAIYLEISSEASHEYLGLL 251
>gi|228474816|ref|ZP_04059547.1| putative membrane protein [Staphylococcus hominis SK119]
gi|228271479|gb|EEK12847.1| putative membrane protein [Staphylococcus hominis SK119]
Length = 318
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 21/142 (14%)
Query: 64 KDGNIIVLLGNGT---TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K ++I++LG G T+ P + SR+ + +YK S +C I++SG
Sbjct: 145 KQYDMILILGAGIFNETVTPMLA-----------SRLDRALEIYK---VQSHNCNILVSG 190
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---II 177
G ++E++ N L++ GV I +E+QS T++N +S S I N +N I+
Sbjct: 191 GQGPDEPISEALAMKNYLIKCGVSSSSILMESQSSSTYENFLYSKSFI-NTSFENVPSIL 249
Query: 178 LVSSAYHLKRSQLYFQHFGINT 199
V+S +H+ R+ + Q I
Sbjct: 250 CVTSQFHILRALRFAQKLNIKV 271
>gi|168209634|ref|ZP_02635259.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
gi|170712243|gb|EDT24425.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
Length = 257
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
++ + I++SGG + E+ L+E+GV +D I LE ++ T++N +S +
Sbjct: 127 EKTGFNGEIVVSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKI 186
Query: 168 IKNMQGK-----NIILVSSAYHLKRSQLYFQHFGIN 198
I+N+ K +I++V++ +H RS L + G N
Sbjct: 187 IENLSRKPIKDLDILIVTTDFHAMRSNLLAKRNGYN 222
>gi|152989850|ref|YP_001355572.1| hypothetical protein NIS_0098 [Nitratiruptor sp. SB155-2]
gi|151421711|dbj|BAF69215.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 233
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I+ E +SL+T+QNA F++ + + K+I LV+SAYH+ R+ F+HFG + DY
Sbjct: 137 IRYEVKSLNTYQNAAFTA---QKLPQKSICLVTSAYHMPRAYKLFRHFGFSITPVSCDYQ 193
Query: 208 N----AYYSIIPLSANFYLTELALKEYIGIL 234
+ + P + +A+ EY+G+L
Sbjct: 194 TKDDIKVWDLFPSMEGLKKSYIAIHEYVGLL 224
>gi|70725701|ref|YP_252615.1| hypothetical protein SH0700 [Staphylococcus haemolyticus JCSC1435]
gi|68446425|dbj|BAE04009.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 318
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K ++I++LG G P + R+ + +Y+ + C II+SGG
Sbjct: 145 KQYDLIMVLGAGIFTEKVTPMLA--------ERLNRALSVYQ---HQTDKCKIIVSGGQG 193
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSS 181
++E++ L++ GV + I +E+QS +TF+N +S +I N+ NI+ V+S
Sbjct: 194 PDEPISEALAMQRYLIQHGVPQSSIIMESQSTNTFENFYYSKKVIHNLYSNSPNILCVTS 253
Query: 182 AYHLKRSQLYFQH 194
+H+ R + F H
Sbjct: 254 QFHILRG-MKFAH 265
>gi|314935744|ref|ZP_07843096.1| putative membrane protein [Staphylococcus hominis subsp. hominis
C80]
gi|313656309|gb|EFS20049.1| putative membrane protein [Staphylococcus hominis subsp. hominis
C80]
Length = 318
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 21/140 (15%)
Query: 64 KDGNIIVLLGNGT---TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K ++I++LG G T+ P + SR+ + +YK S +C I++SG
Sbjct: 145 KQYDMILILGAGIFNETVTPMLA-----------SRLDRALEIYK---VQSHNCNILVSG 190
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---II 177
G ++E++ N L++ GV I +E+QS T++N +S S I N +N I+
Sbjct: 191 GQGPDEPISEALAMKNYLIKCGVSSSSILMESQSSSTYENFLYSKSFI-NTSFENVPSIL 249
Query: 178 LVSSAYHLKRSQLYFQHFGI 197
V+S +H+ R+ + Q I
Sbjct: 250 CVTSQFHILRALRFAQKLNI 269
>gi|163840431|ref|YP_001624836.1| hypothetical protein RSal33209_1686 [Renibacterium salmoninarum
ATCC 33209]
gi|162953907|gb|ABY23422.1| hypothetical membrane protein [Renibacterium salmoninarum ATCC
33209]
Length = 282
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 83/175 (47%), Gaps = 21/175 (12%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++++ + +V+LG+ P +R SR+ + + LY+ + +I SG
Sbjct: 97 RYQRSPDAVVVLGSQIINGKAPPLLR--------SRLDKGLELYREISVGAAPL-LIPSG 147
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILV 179
G E L+++G D+ E ++++T QN QFS+++ + + ++++V
Sbjct: 148 GQGVGESRPEGAAMAEYLVDAGAPPHDVVPELRAVNTAQNLQFSAAVAREYERLGSLVVV 207
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++ YH+ R+ L + GIN + S +A ++L L+E++ IL
Sbjct: 208 TNNYHVLRAALLSRKLGINAEVVGSP-----------TAGYFLPSAFLREFVAIL 251
>gi|168822078|ref|ZP_02834078.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|197247984|ref|YP_002145908.1| hypothetical protein SeAg_B0996 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197211687|gb|ACH49084.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205341539|gb|EDZ28303.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320085232|emb|CBY95017.1| Uncharacterized protein ycbC [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 258
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 26/223 (11%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F +GW + + L+ + RP+ + P W+ + IV+LG G T P +
Sbjct: 41 VFISVGWLALLLLSLQPVSDHLLRPIENRYPTWQGPQKVEYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL+++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLAEGIRLWRA----NPGAKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
R DI + DT + A I + +LV+SA HL R+ ++FQH G+N +
Sbjct: 152 PRSDIITLDKPKDTEEEAVAVKQAIGDAP---FLLVTSASHLPRAMIFFQHAGLNPLPAP 208
Query: 204 SDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ A E +G L + +G
Sbjct: 209 ANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|86140156|ref|ZP_01058718.1| hypothetical protein MED193_11777 [Roseobacter sp. MED193]
gi|85823093|gb|EAQ43306.1| hypothetical protein MED193_11777 [Roseobacter sp. MED193]
Length = 164
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++ V+LG P R P+ + R + +L++ + H +I GG Q H
Sbjct: 2 SVAVVLGAAV-----WPGGRPSPTLRR--RCLQAAKLFR--RGRVSH--VICCGGLGQ-H 49
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+E+ V E+GV I LE QS T +N +++ + NI+LV+ YH
Sbjct: 50 PPSEAEVMRQICREAGVPDSAILLEDQSRTTLENLANIRALLARLDQPNIVLVTDRYHKW 109
Query: 187 RSQLYFQHFGINTKASC 203
R+ + +HFG +ASC
Sbjct: 110 RALMVARHFGFQAQASC 126
>gi|73661853|ref|YP_300634.1| hypothetical protein SSP0544 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494368|dbj|BAE17689.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 323
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K D ++I++LG G P + SR+ + LY + I+SGG
Sbjct: 143 KPDFDVILVLGAGIFTENVTPMLA--------SRLDRALTLYV----QQPNAKFIVSGGQ 190
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVS 180
++E++ L+ GVE + I LE QS T +N QFS S+I++ I+ V+
Sbjct: 191 GPDEPISEALAMKRYLIHHGVESNHIMLEDQSTSTSENIQFSKSLIESHFECVPKIVCVT 250
Query: 181 SAYHLKRSQLYFQHFGIN 198
S +H+ R+ + Q F +
Sbjct: 251 SQFHIMRALRFGQKFNLK 268
>gi|89092000|ref|ZP_01164955.1| hypothetical protein MED92_07531 [Oceanospirillum sp. MED92]
gi|89083735|gb|EAR62952.1| hypothetical protein MED92_07531 [Oceanospirillum sp. MED92]
Length = 272
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 13/222 (5%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+F + C +LL + + L+ L+ + +P LS + IIVL G +
Sbjct: 39 VFLVWCSVLLTIVVSQYPVANHALEPLESYFSKPNLSSLEQPLAGIIVLGGGEDA---EL 95
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLE 140
I F S + E + + + + +I +GG + G + V N L E
Sbjct: 96 SGIHGSNEFNSGA---ERLMVLPALMLRNPKLQVIYTGGSGSIFRPGYRGADVAQNWLSE 152
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---IILVSSAYHLKRSQLYFQHFGI 197
G+ I +E S +T+QNA ++ +I + + +L++SA+H+ RS F+ GI
Sbjct: 153 QGLAGRLI-IERDSRNTYQNALYTRELINELGADSQGSWLLITSAFHMPRSVGVFRKAGI 211
Query: 198 NTKASCSDYLNAYYSIIP-LSANFYLTELALKEYIGILIAYY 238
+ DY A P L+ N LA++E+IG+L YY
Sbjct: 212 DVVPYPVDYRVAENRWRPSLNRNMADLNLAVREWIGLLAYYY 253
>gi|326390031|ref|ZP_08211593.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
JW 200]
gi|325993896|gb|EGD52326.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
JW 200]
Length = 192
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 26/179 (14%)
Query: 31 LLFSFIG------WGIIPTILLKHLQFS-YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
LL FIG ++ T+ + + F+ Y++P KK IIVL G + P
Sbjct: 3 LLLRFIGILIVIFVTVVITLEYQIISFALYEKP------KKSDVIIVL---GCAVYGKTP 53
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ P F+ R+ E +RLYK II+SGG ++E+ LL++G+
Sbjct: 54 S----PFFKE--RLDEALRLYK----EGYGKYIIVSGGKGPGENISEAEAGKEYLLKNGI 103
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
I + +S T++N FS ++ K I++S+ +HLKR+ + + IN S
Sbjct: 104 PEKIILTDDKSFSTYENLLFSKEIMDKNSLKTAIIISNKFHLKRASVIAKRIDINASFS 162
>gi|262404134|ref|ZP_06080689.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC586]
gi|262349166|gb|EEY98304.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC586]
Length = 283
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 27 SCFMLLFS-----FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTII 79
C ++LFS FI + I T LL L+ +Y L +G + +++LGNG +
Sbjct: 38 GCLVVLFSLTGIFFISFQPIATRLLMPLERTYTAFL-----PVEGTVDYVMVLGNGHVVD 92
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
IP E S + R+ E +R+ + M + +GG H + V L
Sbjct: 93 DDIPPTS-ELSRAALMRLAEGIRINRMYPGSKMILSGY-AGGSEVSHARMMARVA----L 146
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV + DI L + DT++ A+ +++ + Q K ++LV+SA H+KR+ F+ G+N
Sbjct: 147 ALGVPKSDIILLETAKDTWEEARQAAAFV---QQKRMVLVTSASHMKRAMREFEAAGLNP 203
Query: 200 KASCSDYLN 208
+ +++L
Sbjct: 204 IPAPTNFLG 212
>gi|224825882|ref|ZP_03698986.1| protein of unknown function DUF218 [Lutiella nitroferrum 2002]
gi|224602106|gb|EEG08285.1| protein of unknown function DUF218 [Lutiella nitroferrum 2002]
Length = 267
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 18/196 (9%)
Query: 49 LQFSYQR-PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSC 107
L S +R PL++ ++ IV+LG G P R EPS + R +R
Sbjct: 66 LNRSLERFPLVALSQVRETGAIVVLGGGKKPAPEY--GRNEPSADTLMR----LRYAAYL 119
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSS 166
+HS +++SGG P G AE+ V L+ GV+ + E S TF NA+ S+
Sbjct: 120 ARHSGR-PVLVSGGAPLG-GEAEAPVMARTLVSDYGVQPRWV--EQGSDTTFDNARLSAQ 175
Query: 167 MIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL----NAYYSIIPLSANFYL 222
++K ++I LVS +HL R+ F+ G+ + + + +P
Sbjct: 176 LLKADGVRSITLVSQGWHLARAVPLFEEQGLKVLPAPTGLVRYDGGGVMWYLPSGRAMQE 235
Query: 223 TELALKEYIGILIAYY 238
T AL+E++G L YY
Sbjct: 236 THAALREWVGRL--YY 249
>gi|168181584|ref|ZP_02616248.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|237796355|ref|YP_002863907.1| hypothetical protein CLJ_B3154 [Clostridium botulinum Ba4 str. 657]
gi|182675224|gb|EDT87185.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|229261607|gb|ACQ52640.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
Length = 197
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ E +RLY II+SG ++E+ L++ GV++ I LE +S
Sbjct: 65 RLDEGLRLY----NEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGVDKKFIILEDKSR 120
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+T +N +FS +++ + I+VS+ YHLKR++L Q GI KAS S
Sbjct: 121 NTLENIKFSKKKMEDNNLSSSIIVSNKYHLKRAELLCQKEGI--KASYS 167
>gi|300021971|ref|YP_003754582.1| hypothetical protein Hden_0439 [Hyphomicrobium denitrificans ATCC
51888]
gi|299523792|gb|ADJ22261.1| protein of unknown function DUF218 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 264
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE-SIVYNNKLLESGVERDDIKL 150
+S R+ E +R+ + + I+ +GG G E S ++++G+ + + +
Sbjct: 105 ESAERLTEAIRIARQRPE----LKIVFTGGVGDLFGGFEASEAIRQYVVDAGIAPERVII 160
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E S DT++NA + + +LV+SAYH+ R+ F+ G+N D+
Sbjct: 161 ENGSRDTYENAVLTLQTLNPAPDDRWLLVTSAYHMPRAVGAFRQAGLNISPFPVDFRTRD 220
Query: 211 YSII---PLS--ANFYLTELALKEYIGILIAYYRGNR 242
I P+S A +LA++E+IG L+AY R
Sbjct: 221 AGDILRFPISVAAGLQRADLAVREWIG-LVAYRIAGR 256
>gi|322832243|ref|YP_004212270.1| hypothetical protein Rahaq_1521 [Rahnella sp. Y9602]
gi|321167444|gb|ADW73143.1| protein of unknown function DUF218 [Rahnella sp. Y9602]
Length = 259
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 55 RPLLS--PQWKKDGNI----IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIFETMRLY 104
RP+ S P ++ GN+ +V+LG G T P PS S R+ E +R+Y
Sbjct: 64 RPIESVYPTYQASGNVPVKYVVVLGGGYTYNPAW-----APSSNLINNSLPRVAEGIRIY 118
Query: 105 KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQF 163
++ M I +G + ++ + V K+ ES GV DI L + DT Q A
Sbjct: 119 RANPGSKM----IFTGARAMTNPMSSAAVAG-KVAESLGVPESDIILLDRPRDTHQEAL- 172
Query: 164 SSSMIKNMQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPL 216
+K M G+ +LV+SA HL R+ ++F+ G+N + ++ LN + +P
Sbjct: 173 ---QVKEMLGEQPFVLVTSANHLPRAIIFFRQLGLNPIPAPANQLAIDSPLNPWEKALPQ 229
Query: 217 SANFYLTELALKEYIG 232
+ +E A E +G
Sbjct: 230 ALFLSHSERAWYETLG 245
>gi|167724441|ref|ZP_02407677.1| hypothetical protein BpseD_35807 [Burkholderia pseudomallei DM98]
Length = 111
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ F++ F+ IG G++P LL+ LQ Y RP + +W + N IV+LG GT I
Sbjct: 26 RALFVATVAAFFA-IGCGLVPAWLLRALQAPYAARPAI--EWGER-NAIVMLGLGTEKIA 81
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
A+ EP SYSR+ E LY+ C++
Sbjct: 82 ATGAV--EPGTFSYSRVVEAASLYRDCRR 108
>gi|148560243|ref|YP_001259097.1| hypothetical protein BOV_1136 [Brucella ovis ATCC 25840]
gi|148371500|gb|ABQ61479.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 268
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKL 150
+ RI ETMRL + I++SGG+ + E+ LL+ G +
Sbjct: 109 AADRIVETMRLARLYPD----AKILVSGGEGTFFEKSAREAETTRALLLDLGFSGNRYIF 164
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E + +T +NA FS ++ + G+ +LV+SAYH+ R+ F+ G + A DY
Sbjct: 165 EGKLRNTVENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRT 224
Query: 211 YSIIPL---SANFYLTE--LALKEYIGILIAYYRGN 241
L S N L+ +AL+E+ G+ ++ G
Sbjct: 225 RETFGLYLESPNDALSRFSMALREWTGLAAYWWTGR 260
>gi|194443111|ref|YP_002040188.1| hypothetical protein SNSL254_A1023 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194401774|gb|ACF61996.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 258
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F +GW + + L+ + RP+ + P W+ + IV+LG G T P +
Sbjct: 41 VFISVGWLALLLLSLQPVSDHLLRPIENRYPTWQGPQKVEYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL+++ + +I +GG + + ++ + GV
Sbjct: 96 APSSNLINNSLPRLAEGIRLWRA----NPGAKLIFTGGVAKTNTVSTAEAGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R DI +LD ++ + ++ +K G +LV+SA HL R+ ++FQH G+N +
Sbjct: 152 PRSDII----TLDKPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQHAGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ A E +G L + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|255527086|ref|ZP_05393975.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296188150|ref|ZP_06856542.1| hypothetical protein CLCAR_3670 [Clostridium carboxidivorans P7]
gi|255509238|gb|EET85589.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296047276|gb|EFG86718.1| hypothetical protein CLCAR_3670 [Clostridium carboxidivorans P7]
Length = 197
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 11/134 (8%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R E +RL+K II+SGG Q ++E+ L+ GV+ I LE +S
Sbjct: 60 RTDEGLRLFK----EGYGKYIIVSGGKGQGESISEAEAMKRYLVSKGVDSSKIILEDKSA 115
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC-------SDYLN 208
T N S S+++ K I+VS+ YHLKR+ L GI S +D
Sbjct: 116 STMANLINSKSIMEKKNFKTAIIVSNKYHLKRASLMATQEGIKASYSGVFVKPYKTDEFV 175
Query: 209 AYYSIIPLSANFYL 222
Y +P +Y
Sbjct: 176 GYLREVPALMKYYF 189
>gi|118591094|ref|ZP_01548493.1| hypothetical protein SIAM614_15747 [Stappia aggregata IAM 12614]
gi|118436170|gb|EAV42812.1| hypothetical protein SIAM614_15747 [Stappia aggregata IAM 12614]
Length = 265
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 29/209 (13%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ-SYSR 96
W I+P L+ +QRP + DG I++LG + T +R + + S R
Sbjct: 61 WLIVP------LEDRFQRPATLENY--DG--IIILGGAVDTVVT--GVRGDTALTMSAER 108
Query: 97 IFETMRLYKSCKQ----HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
+ T RL K+ H+ +I+S + G A + G+ + I LE
Sbjct: 109 VTITARLAKALPAAKIIHTGGQGMIVSSQATEAEGAAR------LFRDFGIAPERIILED 162
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG-INTKASCSDYL---- 207
QS +T+QNA ++ +++ G+ +LV+SAYH+ RS F+ G A D+
Sbjct: 163 QSQNTWQNAVYAKKIVQPQPGQRWLLVTSAYHMPRSMGVFEKAGWTGVTAYPVDFRTRGP 222
Query: 208 -NAYYSIIPLSANFYLTELALKEYIGILI 235
++ S ++A +E++G+ +
Sbjct: 223 QDSMLGFDGASKGLRRFDIAFREWVGLAV 251
>gi|168205486|ref|ZP_02631491.1| conserved hypothetical protein [Clostridium perfringens E str.
JGS1987]
gi|170663020|gb|EDT15703.1| conserved hypothetical protein [Clostridium perfringens E str.
JGS1987]
Length = 257
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
++ + I++SGG + E+ L+E+GV +D I LE ++ T++N +S +
Sbjct: 127 EKTGFNGEIVVSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKI 186
Query: 168 IKNMQGK-----NIILVSSAYHLKRSQLYFQHFG 196
I+++ GK +I++V++ +H RS L + G
Sbjct: 187 IESLSGKPIKDLDILVVTTDFHAMRSNLLAKRNG 220
>gi|311747747|ref|ZP_07721532.1| membrane protein [Algoriphagus sp. PR1]
gi|126575735|gb|EAZ80045.1| membrane protein [Algoriphagus sp. PR1]
Length = 256
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 19/122 (15%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGG------DPQKHGLAESIVYNNKLLESGVERDDI 148
RI ++LY+ K I+I+GG +PQ +E+ + L+ +GV +D+
Sbjct: 102 DRITHALQLYRMGKIKK----ILITGGQGLNPVNPQ----SEAELLQRFLIMTGVPPEDV 153
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNI----ILVSSAYHLKRSQLYFQHFGINTKASCS 204
+E ++ +T QNAQF+ + ++ +G NI +L++SA+H+ RS+ F G+ T+ +
Sbjct: 154 MIEDKAKNTAQNAQFTKTFLEE-KGINIDQEFLLITSAFHMYRSKGCFDKVGLKTETFPT 212
Query: 205 DY 206
DY
Sbjct: 213 DY 214
>gi|332662639|ref|YP_004445427.1| hypothetical protein Halhy_0646 [Haliscomenobacter hydrossis DSM
1100]
gi|332331453|gb|AEE48554.1| protein of unknown function DUF218 [Haliscomenobacter hydrossis DSM
1100]
Length = 251
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 69/117 (58%), Gaps = 7/117 (5%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKL 150
S +R+ +T+ LY+ K + I+++GG G E+ V + + + G+ R + +
Sbjct: 99 SVNRLTQTLELYQQGKIRN----ILLTGGSSNIITKGQLEAQVVVDFIEDMGIPRTAVIV 154
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
E+Q+ +T++NA S+ +I+ K + +L++SA H++R++ F+ G++ + C+DY
Sbjct: 155 ESQARNTWENALNSTQIIQAKYPKASCVLITSATHMRRARACFRKAGLDIEYYCTDY 211
>gi|116249878|ref|YP_765716.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254526|emb|CAK05600.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 262
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
+L++ L+ + +P P + +++LG G IE + R E +RL
Sbjct: 59 LLMQGLEQRFAKPAADPDSLQ---CMIVLGGGFENEVNTARHGIEFN-GGADRFIEALRL 114
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES--GVERDDIKLETQSLDTFQNA 161
+ Q I++SGGD G+ E ++ GV RD + E QS TF+NA
Sbjct: 115 AQKFPQSR----ILVSGGDGSISGIYEGDAAASERFFPLFGVGRDRLIEERQSRTTFENA 170
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-------LNAYYSII 214
+ + + N +L++S +H+ RS F+ GI+ +DY L ++
Sbjct: 171 VNTKEFLASQGLSNCLLITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRLGLDFTQP 230
Query: 215 PLSANFYLTELALKEYIGILIAYYRGNR 242
L+A T A++E+ G L+ YY R
Sbjct: 231 SLNAQNLAT--AIREWYG-LVGYYLAGR 255
>gi|258627463|ref|ZP_05722244.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258580269|gb|EEW05237.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 287
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTII 79
C ++LFSF G + + T LL L+ +Y L +G + I++LGNG +
Sbjct: 47 GCLVVLFSFTGLFLVSFQPVATRLLMPLERTYTAFL-----PVEGTVDYIMVLGNGHVVD 101
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
IP E S + R+ E +R+ + M + G + + + + L
Sbjct: 102 DDIPPTS-ELSRAALMRLTEGIRISRMYPGSKMILSGYAGGSE-----FSHARMMARVAL 155
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV + DI L + DT++ A+ +++ + Q K ++LV+SA H+KR+ F+ G+
Sbjct: 156 ALGVPKSDIILLETAKDTWEEARQAAAFV---QQKRMVLVTSASHMKRAMREFESAGLTP 212
Query: 200 KASCSDYLN 208
+ ++YL
Sbjct: 213 IPAPTNYLG 221
>gi|150398639|ref|YP_001329106.1| hypothetical protein Smed_3453 [Sinorhizobium medicae WSM419]
gi|150030154|gb|ABR62271.1| protein of unknown function DUF218 [Sinorhizobium medicae WSM419]
Length = 262
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN-GTTIIPTIPAIRI 87
F+ LF+ G + L+ L+ + RP SP+ + +IVL G ++ + I +
Sbjct: 49 FITLFTTAG-----SYFLQILEDRFPRP--SPEPAELACMIVLGGAFENVVMASRGGIEM 101
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES--GVER 145
Q+ R ET+RL + H I++SGGD G+ E + + G+
Sbjct: 102 N---QAAERFVETLRL---ARAHP-GARILVSGGDGSLSGIYEGDAHASAAFFGTFGIGP 154
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+ + E +S TF+NA+ + +++ LV+SAYH+ RS F+ I D
Sbjct: 155 ERLIREGESRTTFENARNTRHLLRENGLDRCALVTSAYHMPRSVGLFRANDIEVTPWPVD 214
Query: 206 YLNAYYSIIPL-----SANFYLTELALKEYIGILIAYY 238
Y + + + S N L A KE+ G L+AYY
Sbjct: 215 YRTSGKVRLGVDFTQPSLNAQLATTAAKEWTG-LLAYY 251
>gi|77465405|ref|YP_354908.1| hypothetical protein RSP_3403 [Rhodobacter sphaeroides 2.4.1]
gi|77389823|gb|ABA81007.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 280
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Query: 113 HCTIIISGGDPQKHG--LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
++ +GG + G + E+ + L+ +GV+ + LE QS +T +NA+F+ +++ N
Sbjct: 136 EARVLFTGGSGRLFGAEIPEARIAREILVSAGVDPARLILEGQSRNTAENARFAKALVAN 195
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKAS-CSDYLNAYYSI---IPLSANFYLTELA 226
+ +LV+SA+H+ R+ F G +DY A L+ N L +A
Sbjct: 196 QGQGSWLLVTSAFHMPRAVETFCAAGWQDLVPWPTDYRTASLRDGIGWDLARNLDLLNVA 255
Query: 227 LKEYIGIL 234
++E+IGIL
Sbjct: 256 VREWIGIL 263
>gi|317506557|ref|ZP_07964352.1| DUF218 domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
gi|316255154|gb|EFV14429.1| DUF218 domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
Length = 330
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV LG G T+P + ++ R+ +T+ + Q I+++GG PQ +G+
Sbjct: 169 IVALGAGLHPDGTMPQVLVD-------RLRKTLEV----AQADPAAPIVVTGGKPQ-NGV 216
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ + L+ GV+ I E S T QNA S+ ++++++ ++++V+SA H++R+
Sbjct: 217 TEADAMADWLVGQGVDPGRIHKEDHSASTVQNALNSAEILRSLRPAHLVIVTSANHVRRA 276
Query: 189 QLYFQ 193
F+
Sbjct: 277 SALFE 281
>gi|148270249|ref|YP_001244709.1| hypothetical protein Tpet_1119 [Thermotoga petrophila RKU-1]
gi|281412552|ref|YP_003346631.1| protein of unknown function DUF218 [Thermotoga naphthophila RKU-10]
gi|147735793|gb|ABQ47133.1| protein of unknown function DUF218 [Thermotoga petrophila RKU-1]
gi|281373655|gb|ADA67217.1| protein of unknown function DUF218 [Thermotoga naphthophila RKU-10]
Length = 237
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%), Gaps = 25/197 (12%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
+S ++ L P + +IV+LG G + S + R+ +++Y+ K
Sbjct: 56 WSLEKNLDVPATLPNDAVIVVLGGG---VERNTKAGDNLSDATLRRLLTGVQIYQKTK-- 110
Query: 111 SMHCTIIISGGDPQKHGL-AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
I+++GG GL E+++ + L+ GV + I +E +S +T++NA F+ I
Sbjct: 111 ---MPILVTGG--SLTGLRPEAMIMKDYLVSLGVPEEKITVEDRSRNTYENAFFTREKIG 165
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY-------SIIPLSANFYL 222
++ IILV+ + H++R+ F+ F S + Y +Y +P + +FYL
Sbjct: 166 DVP---IILVTDSIHMRRAVSTFKSF----FQSVTPYPAGFYFGDPEFVDFLPNATSFYL 218
Query: 223 TELALKEYIGILIAYYR 239
A+ E+IG++ +R
Sbjct: 219 NSRAIYEWIGLVWYNFR 235
>gi|237798424|ref|ZP_04586885.1| hypothetical protein POR16_06246 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021276|gb|EGI01333.1| hypothetical protein POR16_06246 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 256
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 29/244 (11%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWK- 63
+ LI ++W + R +CF++ + +P ++ Q PL QW
Sbjct: 19 LLLIAAWW---LRRSRPRLAAACFIVGLGGLWLMSLPVVVEFSARQLERTTPLPRQQWPI 75
Query: 64 --KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI---FETMRLYKSCKQHSMHCTIII 118
+ + IV+LGNG R P++ + + E +RL + S I+
Sbjct: 76 LAQQADAIVVLGNGRE--------RNSPTWGADTPTGLGLERLRLAARLAKES-GLPIMT 126
Query: 119 SGGDPQKHGLAESIVYNNKLLES-GVERDDIKL-ETQSLDTFQNAQFSSSMIKNMQGKNI 176
+GG +E+ + L E GV ++ E QS T++NA ++ +++ + + +
Sbjct: 127 AGGLHFDQPPSEASIMAQSLQEDFGV---TVRWQEGQSRTTWENATMAARVLQPLGIRRV 183
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYI 231
+LV+ A+H+ R++ F+ G ++ +L + +P S F + + L E
Sbjct: 184 VLVTQAWHMPRARWSFEQAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAA 243
Query: 232 GILI 235
G+L+
Sbjct: 244 GLLV 247
>gi|144899829|emb|CAM76693.1| Protein of unknown function DUF218 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 261
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 24/216 (11%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
+ +F+ W IL++ L+ + P PQ + DG I++ G + P + A R +
Sbjct: 50 IVAFVPW---QAILVQPLENRFPGPSSLPQ-RVDGVIVL----GGALDPVVSAARDQ--- 98
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGD-----PQKHGLAESIVYNNKLLESGVERD 146
+ + E + +H ++ SGG P K E+ V L E G D
Sbjct: 99 VAANGAVERVNALIWLGRHYPKARLVFSGGSGSVTTPDKK---EAPVARRYLNELGFGTD 155
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I E QS +T +NA ++ ++ G+ +LV+SA H+ RS F A DY
Sbjct: 156 GIVFEDQSRNTRENAVYTKQLMAPKNGEVWLLVTSAMHMPRSMGAFAAVDWPVIAYPVDY 215
Query: 207 LNAYYS---IIPLSANFYLTELALKEYIGILIAYYR 239
L L + F L E++G+L YYR
Sbjct: 216 LTTGEGGGFAFDLGSAFSSIGNGLHEWLGLL--YYR 249
>gi|91228201|ref|ZP_01262183.1| hypothetical protein V12G01_20638 [Vibrio alginolyticus 12G01]
gi|91188190|gb|EAS74491.1| hypothetical protein V12G01_20638 [Vibrio alginolyticus 12G01]
Length = 261
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 35/222 (15%)
Query: 28 CFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIP 80
CF++LFSF+G + + T LL L+ ++ L G I +++LGNG I
Sbjct: 39 CFVVLFSFVGIFLVAFQPVSTKLLMPLEREHKAFL-----PVSGTIDYVMVLGNGHVIDD 93
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIISG--GDPQKHGLAESIVYNN 136
IP P+ Q SR MRL + + M+ +I+SG G + ++ + + N
Sbjct: 94 EIP-----PTSQ-LSRA-ALMRLTEGIRILRMYPGAKLILSGYAGGSE---ISHARMMAN 143
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L GV + DI L + DT++ A+ +++ + Q K I+LV+SA H+ R+ F G
Sbjct: 144 VALALGVAKSDIILLEDAKDTWEEARQAAAFV---QQKEIVLVTSASHMSRALYEFNAAG 200
Query: 197 INTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIG 232
I + +++L + P + TEL EY+G
Sbjct: 201 IKPIPAPTNFLAIREISQPWDKYSPKARYLEQTELYWHEYLG 242
>gi|332561062|ref|ZP_08415380.1| hypothetical protein RSWS8N_18489 [Rhodobacter sphaeroides WS8N]
gi|332274860|gb|EGJ20176.1| hypothetical protein RSWS8N_18489 [Rhodobacter sphaeroides WS8N]
Length = 267
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Query: 113 HCTIIISGGDPQKHG--LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
++ +GG + G + E+ + L+ +GV+ + LE QS +T +NA+F+ +++ N
Sbjct: 123 EARVLFTGGSGRLFGAEIPEARIAREILVSAGVDPARLILEGQSRNTAENARFAKALVAN 182
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASC-SDYLNAYYSI---IPLSANFYLTELA 226
+ +LV+SA+H+ R+ F G +DY A L+ N L +A
Sbjct: 183 QGQGSWLLVTSAFHMPRAVETFCAAGWQDLVPWPTDYRTASLRDGIGWDLARNLDLLNVA 242
Query: 227 LKEYIGIL 234
++E+IGIL
Sbjct: 243 VREWIGIL 250
>gi|253730030|ref|ZP_04864195.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726243|gb|EES94972.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
Length = 171
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 73/145 (50%), Gaps = 16/145 (11%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
+R+ + +Y+ Q + II+SGG ++E++ L+ GV++ DI +E+ S
Sbjct: 17 ARLDRALDIYQ---QQASATKIIVSGGQGPDEPISEALAMQRYLIAHGVDKTDILMESHS 73
Query: 155 LDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
++T+ N +S +I N+ + I+ V+S +H+ R+ Q G++ S
Sbjct: 74 INTYTNFLYSKQIINNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGSH------- 126
Query: 213 IIPLSANFYLTELALKEYIGILIAY 237
+F+L L +K+Y+G++ Y
Sbjct: 127 ---TPYHFFLHVL-IKDYLGVMYQY 147
>gi|254228980|ref|ZP_04922401.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262394709|ref|YP_003286563.1| membrane protein [Vibrio sp. Ex25]
gi|151938448|gb|EDN57285.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262338303|gb|ACY52098.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. Ex25]
Length = 261
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 35/222 (15%)
Query: 28 CFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIP 80
CF++LFSF+G + + T LL L+ ++ L G I +++LGNG I
Sbjct: 39 CFVVLFSFVGIFLVAFQPVSTKLLMPLEREHKAFL-----PVSGTIDYVMVLGNGHVIDD 93
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIISG--GDPQKHGLAESIVYNN 136
IP P+ Q SR MRL + + M+ +I+SG G + ++ + + N
Sbjct: 94 EIP-----PTSQ-LSRA-ALMRLTEGIRILRMYPGAKLILSGYAGGSE---ISHARMMAN 143
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L GV + DI L + DT++ A+ +++ + Q K I+LV+SA H+ R+ F G
Sbjct: 144 VALALGVAKSDIILLEDAKDTWEEARQAAAFV---QQKEIVLVTSASHMSRALYEFNAAG 200
Query: 197 INTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIG 232
I + +++L + P + TEL EY+G
Sbjct: 201 IKPIPAPTNFLAISEISQPWDKYSPKARYLEQTELYWHEYLG 242
>gi|251789903|ref|YP_003004624.1| hypothetical protein Dd1591_2303 [Dickeya zeae Ech1591]
gi|247538524|gb|ACT07145.1| protein of unknown function DUF218 [Dickeya zeae Ech1591]
Length = 258
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 25/196 (12%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIFETMRLYKSCKQHS 111
P +P++ K N IV+LG G T P P PS S +R+ E +RL+++ +
Sbjct: 71 PTWTPEFPKV-NYIVVLGGGYTFNPDWP-----PSANLINNSLARVTEGIRLWRA----N 120
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+I +G + + + S + ++ ES GV DI L Q+ DT + A + ++I
Sbjct: 121 PGAKLIFTGAAARSNPVT-SASTSARVAESLGVPAQDILLVDQARDTEEEAAGTEALIGK 179
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGIN------TKASCSDYLNAYYSIIPLSANFYLTE 224
+ +LV+SA HL R+ +FQ G++ + + + LN + + P + +E
Sbjct: 180 ---QPFLLVTSASHLPRAIRFFQARGLHPIPAPANQLAMTSPLNPWERVFPSALYLSHSE 236
Query: 225 LALKEYIGILIAYYRG 240
A E +G++ +G
Sbjct: 237 RAWYEGLGLIWQQMKG 252
>gi|292558336|gb|ADE31337.1| hypothetical protein SSGZ1_0880 [Streptococcus suis GZ1]
Length = 336
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ QS+ I S F ++F ++G+ + TI++ L L + + +V+LG G
Sbjct: 118 VVQSLSAI---SFFNMVFVYVGFFVSYTIIISMLYTMSSFVNLVNFFPGKLDYVVVLGAG 174
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
P + SRI + + +Y Q +I+SGG +AE
Sbjct: 175 LIGDKVTPLLA--------SRIEKGIAIY----QKQPGSKLIMSGGQGPDELIAEGQAMA 222
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS-----QL 190
N LE GV +DI +E QS +T +N +FS +++K G LV++ YH+ R+ QL
Sbjct: 223 NYALEKGVPAEDILIENQSTNTEENLKFSYALMK--PGSRFALVTNYYHVFRALLLARQL 280
Query: 191 YFQHFGINTKASCSDYLNAY 210
+ G K LNA+
Sbjct: 281 RIKCIGYGAKTKFYFSLNAF 300
>gi|170755560|ref|YP_001782537.1| hypothetical protein CLD_1642 [Clostridium botulinum B1 str. Okra]
gi|169120772|gb|ACA44608.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
Length = 197
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ E +RLY II+SG ++E+ L++ G+++ I LE +S
Sbjct: 65 RLDEGLRLY----NEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSR 120
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+T +N +FS +++ + I+VS+ YHLKRS+L Q GI KAS S
Sbjct: 121 NTLENIKFSKKKMEDNNLSSSIIVSNKYHLKRSELLCQKEGI--KASYS 167
>gi|188589627|ref|YP_001922120.1| integral membrane protein [Clostridium botulinum E3 str. Alaska
E43]
gi|188499908|gb|ACD53044.1| integral membrane protein [Clostridium botulinum E3 str. Alaska
E43]
Length = 348
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 80/175 (45%), Gaps = 21/175 (12%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ I++LG+G + R+ P S RI + + Y + II SGG
Sbjct: 165 DFIIVLGSG------LIGERVPPLLAS--RIDKAIEFYNKQSTVTNPPKIIFSGGQGSDE 216
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYH 184
++E++ + G+ +D LE +S++T QN FS ++ N+ I V++ +H
Sbjct: 217 KISEALAMQRYATQKGIPIEDTILEDKSVNTLQNMIFSKKIMDNLIPNTHASIFVTNNFH 276
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
L R+ ++ + G+ ++ S +A ++L ++EYI ++ Y +
Sbjct: 277 LFRAGIFARKAGLKSQGIGSK-----------TAFYFLPNAMIREYIAFVVMYKK 320
>gi|188588528|ref|YP_001921214.1| GdmH [Clostridium botulinum E3 str. Alaska E43]
gi|188498809|gb|ACD51945.1| conserved hypothetical protein [Clostridium botulinum E3 str.
Alaska E43]
Length = 253
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II+SGG ++E++ LLE G+ D I +E QS +TF+N ++S +I+ KN
Sbjct: 133 IIVSGGKGNDERISEAMAMKKYLLEQGISEDKILMEDQSKNTFENFKYSKKLIEEQSNKN 192
Query: 176 II-----LVSSAYHLKRSQLYFQHFGIN 198
I +V++ +H RS++ + G N
Sbjct: 193 IDDLSVKIVTTDFHGFRSKMLAKRNGYN 220
>gi|269967671|ref|ZP_06181721.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269827758|gb|EEZ82042.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 261
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 35/222 (15%)
Query: 28 CFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIP 80
CF++LFSF+G + + T LL L+ ++ L G I +++LGNG I
Sbjct: 39 CFVVLFSFVGIFLVAFQPVSTKLLMPLEREHKAFL-----PVSGTIDYVMVLGNGHVIDD 93
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIISG--GDPQKHGLAESIVYNN 136
IP P+ Q SR MRL + + M+ +I+SG G + ++ + + N
Sbjct: 94 EIP-----PTSQ-LSRA-ALMRLTEGIRILRMYPGAKLILSGYAGGSE---ISHARMMAN 143
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L GV + DI L + DT++ A+ +++ + Q K I+LV+SA H+ R+ F G
Sbjct: 144 VALALGVAKSDIILLEDAKDTWEEARQAAAFV---QQKEIVLVTSASHMSRALYEFNAAG 200
Query: 197 INTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIG 232
I + +++L + P + TEL EY+G
Sbjct: 201 IKPIPAPTNFLAISEISQPWDKYSPKARYLEQTELYWHEYLG 242
>gi|124007832|ref|ZP_01692534.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123986778|gb|EAY26559.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 256
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 23/247 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
M ++W+ L+ + W LL + R+ + LL+ F I+ LL L + PL
Sbjct: 14 MPVTWLCLVFT-WALLTKKPRRRRQLLRTGVFLLWLFTNPFIVNQALL--LWEAPPTPLH 70
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
S + D I++ G T P R+ + RI + + LY+ K I+I
Sbjct: 71 SIRQNYDVGIVL---TGVTNTDKKPHDRVYLD-KGGDRITQALMLYRVGKIKK----ILI 122
Query: 119 SGG--DP-QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGK 174
SGG DP Q+ AE+ + LL++ V DI +ET++ +T +NA ++ ++ K +
Sbjct: 123 SGGSFDPKQRLERAEAYLLKQVLLQAKVPSHDIIIETKARNTRENALNTAKILNKQFPRQ 182
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALK 228
+ +L++SA+H++R+ F+ GI D+ +S+ P Y +
Sbjct: 183 SYLLITSAFHIRRAVGCFRQAGIRVTPFSVDFYTIDKGFTFPFSLFPAEKALYKWYVLSH 242
Query: 229 EYIGILI 235
E IG ++
Sbjct: 243 EVIGYIV 249
>gi|302333991|gb|ADL24184.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 171
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 16/145 (11%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
+R+ + +Y+ Q + II+SGG + E++ L+ GV++ DI +E+ S
Sbjct: 17 ARLDRALDIYQ---QQASATKIIVSGGQGPDEPIPEALAMQRYLIAHGVDKTDILMESHS 73
Query: 155 LDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
++T+ N +S +I N+ + I+ V+S +H+ R+ Q G++ S
Sbjct: 74 INTYTNFLYSKQIINNLYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGSH------- 126
Query: 213 IIPLSANFYLTELALKEYIGILIAY 237
+F+L L +K+Y+G++ Y
Sbjct: 127 ---TPYHFFLHVL-IKDYLGVMYQY 147
>gi|237711018|ref|ZP_04541499.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265750614|ref|ZP_06086677.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|229454862|gb|EEO60583.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263237510|gb|EEZ22960.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 252
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
Query: 86 RIEPSFQSYS-RIFETMRLYKSCKQHSM----HCTIIISGGDPQKHGLAESIVYNNKLLE 140
R P F + R+ E +RLYK + + +II S G A + L +
Sbjct: 86 RSRPEFSEIADRLLEGIRLYKHGRIRKLVLASDGSIIESKDGKGLQGNAADM--KQYLAD 143
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVSSAYHLKRSQLYFQHFGINT 199
G+ +D+ LET++ +T++NA F+ +I N M+ ++ +L++SA H++RS F G+N
Sbjct: 144 LGMPLEDVILETRANNTWENATFTLELIGNSMKTESTLLITSATHMRRSLWTFHAAGLNP 203
Query: 200 KASCSD 205
+D
Sbjct: 204 DTYITD 209
>gi|259503279|ref|ZP_05746181.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
gi|259168734|gb|EEW53229.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
Length = 278
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 19/140 (13%)
Query: 102 RLYKSCK--QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL ++ + Q TI++SGG + E+ LLE G+ + + E+Q+ +T+Q
Sbjct: 130 RLTRAAQFWQRQPTVTIVVSGGRVHGDQVTEAAAMAAFLLECGLPPEKLLQESQARNTWQ 189
Query: 160 NAQFSSSMI-KNMQGKN---IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
N +S +I ++ G +++V+S++H+ R+ +Y S L Y +P
Sbjct: 190 NLAYSQRLITQHWSGTGQPRVVVVTSSFHVPRAWIY------------SRQLGQRYQFLP 237
Query: 216 LSANFYLTELAL-KEYIGIL 234
++ LAL ++Y+GIL
Sbjct: 238 APTPWHYLPLALVRDYLGIL 257
>gi|310826960|ref|YP_003959317.1| hypothetical protein ELI_1368 [Eubacterium limosum KIST612]
gi|308738694|gb|ADO36354.1| hypothetical protein ELI_1368 [Eubacterium limosum KIST612]
Length = 346
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 105 KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
K + ++SGG ++E++V + LL G + DI +E S +T +N FS
Sbjct: 196 KQMEMTGKKAKFVVSGGKGMDESVSEALVMKDYLLSKGYHKSDILVEEHSRNTRENMLFS 255
Query: 165 SSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLT 223
++I ++ I V+S++H+ R+ LY + ++ + +A +Y
Sbjct: 256 KAIIDRLKPNARGIFVTSSFHVLRASLYARDAELDFTGVPAK-----------TAFYYFP 304
Query: 224 ELALKEYIGIL 234
L+E+IG+L
Sbjct: 305 NAFLREFIGVL 315
>gi|310829787|ref|YP_003962144.1| integral membrane protein [Eubacterium limosum KIST612]
gi|308741521|gb|ADO39181.1| integral membrane protein [Eubacterium limosum KIST612]
Length = 403
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 35/188 (18%)
Query: 55 RPLLSPQWKKDGNIIVL---LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
RP+L + IIVL L G + P + RI+ + + Y R ++ K+ S
Sbjct: 208 RPVLRQDY-----IIVLGSGLMGGNKVTPLLAG-RIDRALKVYRR--------QADKKKS 253
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-- 169
+I+SGG +AE LE G+ D I +E QS +T++N FS +I+
Sbjct: 254 -PPMLIMSGGQGGDEQIAEGEAMKQYALEQGIPEDHILVEDQSKNTYENMLFSRQLIESR 312
Query: 170 --NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYL-TELA 226
+M+ I+ +S YH+ R+ +Y + G+ + I FY
Sbjct: 313 EADMKHLRILFSTSNYHVFRAGIYARKAGLKAQG------------IGAKTKFYFWYNAL 360
Query: 227 LKEYIGIL 234
L+EY+ IL
Sbjct: 361 LREYVAIL 368
>gi|114048174|ref|YP_738724.1| hypothetical protein Shewmr7_2682 [Shewanella sp. MR-7]
gi|113889616|gb|ABI43667.1| protein of unknown function DUF218 [Shewanella sp. MR-7]
Length = 244
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 19/173 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM--HCTIIISG--GDP 123
++++LG+G IP A+ QS S + T RL + +Q + CT+++SG G+
Sbjct: 78 VVMVLGSGHADIPGATAV------QSLSTVALT-RLTEGLRQLQLGQDCTLVVSGWEGEL 130
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+H AE V +E GV+ I DT + A + N + + LV+SA
Sbjct: 131 TQHPHAE--VMAKAAIELGVDASRIVQLPLPRDTIEEAHYFKEHFGN---QAVRLVTSAS 185
Query: 184 HLKRSQLYFQHFGINTKASCSDY--LNAYYSIIPLSANFYLTELALKEYIGIL 234
H+ RS F G+ A+ +D+ + +Y + + N ++ A+ EYIG L
Sbjct: 186 HMPRSMAIFSGQGLAASAAPTDFRARDGFYWRL-TADNLLASQRAIHEYIGRL 237
>gi|323704444|ref|ZP_08116023.1| protein of unknown function DUF218 [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323536510|gb|EGB26282.1| protein of unknown function DUF218 [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 194
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P F+ R+ E +RLYK + II+SGG ++E+ LL++G+ + I
Sbjct: 55 PFFKE--RLNEAIRLYK----KGLGKYIIVSGGKGPGEDVSEAEAGKEYLLKNGIPYNTI 108
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ +S T QN + S ++ K I+VS+ +HLKR+ + + GIN
Sbjct: 109 LKDDKSYSTLQNLENSKKIMDEKSLKTAIIVSNKFHLKRASIIAKEAGINA 159
>gi|47565636|ref|ZP_00236676.1| hypothetical protein cytosolic protein [Bacillus cereus G9241]
gi|47557272|gb|EAL15600.1| hypothetical protein cytosolic protein [Bacillus cereus G9241]
Length = 185
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 72 AKVIVSGGQGEDEDIPEAHSMRNYLMARGIDESRILIEDQSTNTYENVKFSMDL---YDV 128
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 129 KHAVVVSNTYHLYRTKIIAKRLGLKMEALAAE 160
>gi|152994702|ref|YP_001339537.1| hypothetical protein Mmwyl1_0668 [Marinomonas sp. MWYL1]
gi|150835626|gb|ABR69602.1| protein of unknown function DUF218 [Marinomonas sp. MWYL1]
Length = 255
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
W + L+ ++ Y P+ Q D +++LG+G + P + + + R+
Sbjct: 65 WNPVANSLIATVEHDY--PVFDVQQPVDA--VIVLGSGHKDLSNTPTV-MALGNSALFRL 119
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E +R+ K+ + + + +SG Q + V +E GV+ D IK + DT
Sbjct: 120 EEGLRILKA----NPNAQLFVSGYSGQMTE-PHAEVMRRAAIELGVQPDRIKAFPLAKDT 174
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
+ A +SM ++GKN LV+ A HLKR+ ++F+ GI + + YL + S +
Sbjct: 175 EEEA---NSMKPYLEGKNAALVTEASHLKRASIFFEQAGIKIIPAPAMYLGSEKSDWQID 231
Query: 218 AN-FYLTELALKEYIGILIAYYRG 240
A Y ++ A E++G + +G
Sbjct: 232 ATAAYKSQRAFYEWLGRTWQWIKG 255
>gi|332711315|ref|ZP_08431247.1| hypothetical protein LYNGBM3L_63860 [Lyngbya majuscula 3L]
gi|332349864|gb|EGJ29472.1| hypothetical protein LYNGBM3L_63860 [Lyngbya majuscula 3L]
Length = 281
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 15/119 (12%)
Query: 137 KLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
++LE GV R I E++SL+T QNA ++ ++LV+SA H+ RS L F+
Sbjct: 161 QILEDLGVPRAAIIQESRSLNTHQNAVNVRKILDQRDFPKVLLVTSAIHMPRSVLVFRRQ 220
Query: 196 GINTKASCSDYLNAYYSI--------------IPLSANFYLTELALKEYIGILIAYYRG 240
GI+ + +D+L + + + +P + A+KEYIGI+ RG
Sbjct: 221 GIDVIPAPTDFLVSQHELDEPSSSSQAALLHSLPNAEQLSRITRAIKEYIGIVAYRIRG 279
>gi|332283765|ref|YP_004415676.1| membrane protein [Pusillimonas sp. T7-7]
gi|330427718|gb|AEC19052.1| membrane protein [Pusillimonas sp. T7-7]
Length = 254
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Query: 91 FQSYSRIFETMRLYKSCKQH-SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
F+ Y + R+ K+ + + +I+ G + ++E+ + N L + + I
Sbjct: 96 FEPYDKATAIARIDKAANLYKAQRAPLIVVSGAALEGNVSEAQIMANALKQHDIPESAII 155
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+E++S T +NA +++ ++ +NI+LV+SA H+ R+ F+ GI A+ A
Sbjct: 156 MESRSFTTHENAIYTAETLRQRHIQNILLVTSALHMPRAMAVFKKQGIAAIAAPL----A 211
Query: 210 YYSIIPLSANFY-----LTELA-----LKEYIGILIAYYRG 240
++P F + LA +KEY+G+L+ + RG
Sbjct: 212 PQIVVPDDPGFSFWQPDMRSLAASRSIVKEYVGLLVYWVRG 252
>gi|315604221|ref|ZP_07879287.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313927|gb|EFU61978.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 330
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 102 RLYKSCK---QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
R+ ++C+ T++ SGG + ++E+ L GV I LE +S T+
Sbjct: 178 RVERACELWNAQGRRATLVPSGGQGEDEEISEAEAMARHLRALGVPASQIALEDRSTTTW 237
Query: 159 QNAQFSSSMIK---NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
+N FS +I ++ LV+S YH+ R+ +Y + G+N +D L +
Sbjct: 238 ENLSFSRDLIAERSSVPDPRSALVTSDYHVFRAAMYARAVGLN-----ADGLGSR----- 287
Query: 216 LSANFYLTELALKEYIGILIAYY 238
+A +Y ++E+I I Y+
Sbjct: 288 -TARYYFPTAFIREFIAISRRYW 309
>gi|206581004|ref|YP_002239432.1| hypothetical protein KPK_3613 [Klebsiella pneumoniae 342]
gi|288936282|ref|YP_003440341.1| hypothetical protein Kvar_3429 [Klebsiella variicola At-22]
gi|290510662|ref|ZP_06550032.1| hypothetical protein HMPREF0485_02432 [Klebsiella sp. 1_1_55]
gi|206570062|gb|ACI11838.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
gi|288890991|gb|ADC59309.1| protein of unknown function DUF218 [Klebsiella variicola At-22]
gi|289777378|gb|EFD85376.1| hypothetical protein HMPREF0485_02432 [Klebsiella sp. 1_1_55]
Length = 259
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 32/210 (15%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIF 98
LLK ++ SY P W+ + + +V+LG G T P PS S R+
Sbjct: 62 LLKPIEDSY------PTWRGEQPVSYVVVLGGGYTWNP-----EWAPSSNLINNSLPRLT 110
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDT 157
E +RL+++ M T G K + ++ ES GV R DI + + DT
Sbjct: 111 EGIRLWQANPGSKMIFT-----GAAAKTNPVSTAEAGARVAESLGVPRSDIIVLDRPKDT 165
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN------TKASCSDYLNAYY 211
+ AQ I + +LV+SA HL R+ ++F+H G++ + + + LN +
Sbjct: 166 EEEAQAVKRAIGDAP---FLLVTSASHLPRAMIFFRHAGLDPLPAPANQLAVTSPLNPWE 222
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYRGN 241
IP ++ E +G + + +G
Sbjct: 223 RAIPSPVWLMHSDRVGYETLGRVWQWLKGG 252
>gi|262195869|ref|YP_003267078.1| hypothetical protein Hoch_2653 [Haliangium ochraceum DSM 14365]
gi|262079216|gb|ACY15185.1| protein of unknown function DUF218 [Haliangium ochraceum DSM 14365]
Length = 199
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 67/137 (48%), Gaps = 13/137 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ + IV+LG P + R+ S R+ + LY Q + ++GG P
Sbjct: 35 EPADAIVVLG-----APVLAPGRL--SEVGRERVDAAVSLY----QRGAGPRLCVTGGGP 83
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
G E+ G+ + +++E Q+ +T +NA+F+++M++ +++ LVS +
Sbjct: 84 A--GRVEADAMAAHARARGLPEEALRIERQARNTEENARFAAAMLRAEGCRSVWLVSQPF 141
Query: 184 HLKRSQLYFQHFGINTK 200
HL R+ ++F+ G+ +
Sbjct: 142 HLARACVWFRRCGLEAR 158
>gi|27380091|ref|NP_771620.1| hypothetical protein bll4980 [Bradyrhizobium japonicum USDA 110]
gi|27353245|dbj|BAC50245.1| bll4980 [Bradyrhizobium japonicum USDA 110]
Length = 301
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 129 AESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
A+ Y+ +LES G+ ++ + +E S +T++NA F+ ++ G+ +LV+SA+H+ R
Sbjct: 172 AKEADYSAPILESLGIPKERLIVERDSRNTWENAVFTKQLVSPKPGERWLLVTSAFHMPR 231
Query: 188 SQLYFQHFGINTKA-------SCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ F G + +A D L A+ I T++A++E+IG+L
Sbjct: 232 AMGIFHKAGFDVEAYPVDWRMGGRDDLFAFTHIG--KEGLGRTDVAMREWIGLL 283
>gi|311697190|gb|ADQ00062.1| protein containing DUF218 [marine bacterium HP15]
Length = 159
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 89 PSFQS-YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
P+ +S R++ RL+ + K ++ G DP +E++ + L V
Sbjct: 11 PNLESGADRVWHAARLFNASK---APLVLLTGGSDPSHSAASEAMRQFMRDLR--VPGQA 65
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY- 206
+ LE++S +T QNA++S+ ++ I+LV+ AYH+ R++ F+ G+ +D+
Sbjct: 66 LVLESRSRNTSQNAEYSAEILTEQGVNRILLVTFAYHMPRAKALFEAQGLEVILVATDHE 125
Query: 207 ---LNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ S++P ++ + +KE +G L+ +
Sbjct: 126 VLSRPLWRSLLPETSALDGSSRVIKEIVGRLVGH 159
>gi|237727319|ref|ZP_04557800.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229434175|gb|EEO44252.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 230
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
Query: 86 RIEPSFQSYS-RIFETMRLYKSCKQHSM----HCTIIISGGDPQKHGLAESIVYNNKLLE 140
R P F + R+ E +RLYK + + +II S G A + L +
Sbjct: 86 RSRPEFSEIADRLLEGIRLYKHGRIRKLVLASDGSIIESKDGKGLQGNAADM--KQYLAD 143
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVSSAYHLKRSQLYFQHFGINT 199
G+ +D+ LET++ +T++NA F+ +I N M+ ++ +L++SA H++RS F G+N
Sbjct: 144 LGMPLEDVILETRANNTWENATFTLELIGNSMKTESTLLITSATHMRRSLWTFHAAGLNP 203
Query: 200 KASCSD 205
+D
Sbjct: 204 DTYITD 209
>gi|325681016|ref|ZP_08160548.1| hypothetical protein CUS_5709 [Ruminococcus albus 8]
gi|324107245|gb|EGC01529.1| hypothetical protein CUS_5709 [Ruminococcus albus 8]
Length = 193
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL---AESIVYNNKLLESGVERDDIKLET 152
R+ E +RLYKS + M + SGG QK L AE + + GV DI LE
Sbjct: 46 RVPEAVRLYKSGRAPMM----LFSGGKVQKTALGEMAEWLSMETAAISLGVSERDILLEK 101
Query: 153 QSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHF 195
S++T +N S ++++ + G IILV++AYH++R+ L +
Sbjct: 102 CSMNTAENFSCSENLLREVLPDGGRIILVTTAYHMRRALLTAEKI 146
>gi|296272332|ref|YP_003654963.1| hypothetical protein Arnit_0792 [Arcobacter nitrofigilis DSM 7299]
gi|296096506|gb|ADG92456.1| protein of unknown function DUF218 [Arcobacter nitrofigilis DSM
7299]
Length = 235
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 18/145 (12%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
SR +E ++L K T II+ G K +++++ N+L+ G+ + I ++ +
Sbjct: 92 SRAYEVIKLSLKLKD-----TKIITSGYAGKKLISDALYAKNELISLGINENRIIMQDKP 146
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL------N 208
DT + A +I N K ILV+SAYH+ R+ F+ G+N A ++++ N
Sbjct: 147 KDTIEEAISIKKLINN---KPFILVTSAYHMPRAMKIFKMQGLNPIAMPTNFMAKKQKSN 203
Query: 209 AYYSIIPLSANFYLTELALKEYIGI 233
+Y SI L +A+ EYIG+
Sbjct: 204 SYLSIKDLKK----VSIAIHEYIGL 224
>gi|291614927|ref|YP_003525084.1| hypothetical protein Slit_2472 [Sideroxydans lithotrophicus ES-1]
gi|291585039|gb|ADE12697.1| protein of unknown function DUF218 [Sideroxydans lithotrophicus
ES-1]
Length = 251
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 15/196 (7%)
Query: 49 LQFSYQRPLLSPQWKKDGNIIVLLGNGTTI-IPTIPAIRIEPSFQSYSRIFETMRLYKSC 107
LQ +P ++ K + IV+LG GT P + S ++ R+ RLY+
Sbjct: 63 LQGLEGQPFVNDTSKPQADAIVVLGGGTNFRAPEYGGDTV--SKETLERLRYAARLYRQT 120
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
+ I+++GG P + L+E+ K LE E S +T +NA+ S +
Sbjct: 121 GK-----PILVTGGTPLGNDLSEA-AQMKKTLEQEFNVPVRWAEGASNNTLENARLSREV 174
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY----YSIIPLSANFYLT 223
+K I LV+ A+H+ R+ FQ G + + Y Y IP ++ +
Sbjct: 175 LKKEGISRIYLVTHAWHMPRAVQVFQAAGFQVYPAPTAYTTRYQLDLLVFIPSASALRDS 234
Query: 224 ELALKEYIGILIAYYR 239
+ + E IG+L +YR
Sbjct: 235 RIFMHEMIGLL--WYR 248
>gi|251779259|ref|ZP_04822179.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
E Beluga']
gi|243083574|gb|EES49464.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
E Beluga']
Length = 253
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II+SGG ++E++ LLE G+ D I +E QS +TF+N ++S +I+ KN
Sbjct: 133 IIVSGGKGNDERISEAMAMKKYLLEQGISEDKILMEDQSKNTFENFKYSKKLIEEHSNKN 192
Query: 176 II-----LVSSAYHLKRSQLYFQHFGIN 198
I +V++ +H RS++ + G N
Sbjct: 193 IDDLSVKIVTTDFHGFRSKMLAKRNGYN 220
>gi|221369405|ref|YP_002520501.1| hypothetical protein RSKD131_3568 [Rhodobacter sphaeroides KD131]
gi|221162457|gb|ACM03428.1| Hypothetical Protein RSKD131_3568 [Rhodobacter sphaeroides KD131]
Length = 267
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 113 HCTIIISGGDPQKHG--LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
++ +GG + G + E+ + L+ +GV+ + LE QS +T +NA F+ +++ N
Sbjct: 123 EARVLFTGGSGRLFGAEIPEARIAREILVSAGVDPARLILEGQSRNTAENAHFAKALVAN 182
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKAS-CSDYLNAYYSI---IPLSANFYLTELA 226
+ +LV+SA+H+ R+ F G +DY A L+ N L +A
Sbjct: 183 QGQGSWLLVTSAFHMPRAVETFCAAGWQDLVPWPTDYRTASLRDGIGWDLARNLDLLNVA 242
Query: 227 LKEYIGIL 234
++E+IGIL
Sbjct: 243 VREWIGIL 250
>gi|310823295|ref|YP_003955653.1| hypothetical protein STAUR_6067 [Stigmatella aurantiaca DW4/3-1]
gi|309396367|gb|ADO73826.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 256
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQS-YSRIFETMRLYKSCKQHSMHCTIIISGG--DP 123
+ +++LG G + P P + + RI L + + +++SGG D
Sbjct: 78 DAVIVLGGG--LDPDATERSGRPEYNAAVERILRGYELLREGRARH----VLLSGGSLDT 131
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ + E+ V +LL G+ + I +E S +T +NA S +I+ K ++L++SA
Sbjct: 132 RPEAVIEATVLQRQLLAWGIAPERIVVEGHSRNTRENALDSKKLIEERGWKTLLLITSAA 191
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYY----SIIPLSANFYLTELALKEYIGILIAYYR 239
HL R+ F G+ +D + S +P + + + AL+E G ++ R
Sbjct: 192 HLPRAYGCFAAVGLRPDTLAADVRASDGKRPPSWLPRANHLSASTDALRELAGRVVYRLR 251
Query: 240 G 240
G
Sbjct: 252 G 252
>gi|329935832|ref|ZP_08285635.1| hypothetical protein SGM_1127 [Streptomyces griseoaurantiacus M045]
gi|329304675|gb|EGG48550.1| hypothetical protein SGM_1127 [Streptomyces griseoaurantiacus M045]
Length = 336
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 86/183 (46%), Gaps = 25/183 (13%)
Query: 63 KKDGNIIVLLGNG---TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
++ + +V+LG+G T +P + A R++ + + ++R+ + ++ S
Sbjct: 155 RRRADYVVVLGSGLIGGTTVPPLLAGRLDRARKEHARL----------SRKGRRPVMLTS 204
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIIL 178
GG + ES + L+ G D I+ E +S T +N FS ++++ ++
Sbjct: 205 GGQGPDEKVPESHAMADYLVAQGFPADLIEREDRSTTTDENLTFSKALMERANPDYRCVI 264
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V++ YH+ R+ + + G+ + P +A F+ + + ++E++ +L+AY
Sbjct: 265 VTNNYHVFRAAVTARRTGVRGHVIGA----------PTAAYFWPSAM-IREFVALLVAYR 313
Query: 239 RGN 241
R N
Sbjct: 314 RTN 316
>gi|170726063|ref|YP_001760089.1| hypothetical protein Swoo_1709 [Shewanella woodyi ATCC 51908]
gi|169811410|gb|ACA85994.1| protein of unknown function DUF218 [Shewanella woodyi ATCC 51908]
Length = 264
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 9/170 (5%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
G ++++LG+G + A++ + S + +R+ E +R Y C +++SG +
Sbjct: 80 GCLVMVLGSGHDESISGTAVQ-KLSSTALARLSEGIRQYNLGSD----CKLVVSGWSGGE 134
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
L+ + V +E G++ + I + DT + A+F I N + LV+SA H+
Sbjct: 135 GTLSHAEVMAEAAIELGIDNERIIRFPLARDTIEEAEFLKWEIGNYPFR---LVTSASHM 191
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA-NFYLTELALKEYIGIL 234
RS FQ+ G+ +A+ +D++ L A N + ++ A+ EY+G L
Sbjct: 192 PRSMAIFQNIGLAPQAAPTDFMTRQGRWWRLDAENLWSSQRAIHEYLGRL 241
>gi|330445713|ref|ZP_08309365.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489904|dbj|GAA03862.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 275
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 17/187 (9%)
Query: 26 MSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
++ ++ FSF+G + + T LL+ L+ ++ + S K + +++LGNG I
Sbjct: 37 LASGIIAFSFLGIFAVSFQPVSTSLLRPLEQEHRAFVGS---SKPIDFVMVLGNGHVIDK 93
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
T P I E S + R+ E +R+Y+ M + SGG H + V L
Sbjct: 94 TFP-ITSELSRTALMRLAEGIRIYRMYPGSKMILSGY-SGGTTMSHARMLAKVA----LA 147
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV + DI L + DT++ A ++S++ + KN++LV+SA H+ R+ F G++
Sbjct: 148 LGVSKSDILLLETAKDTWEEAHQAASVVGS---KNLVLVTSASHMSRALNEFHQAGLDPI 204
Query: 201 ASCSDYL 207
+ ++++
Sbjct: 205 PAPTNFM 211
>gi|170758739|ref|YP_001788223.1| hypothetical protein CLK_2294 [Clostridium botulinum A3 str. Loch
Maree]
gi|169405728|gb|ACA54139.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 197
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ E +RLY II+SG ++E+ L++ G+++ I LE +S
Sbjct: 65 RLDEGLRLY----NEGYGKYIIVSGAKGPGENISEAEAMEKYLVQKGLDKKFIILEDKSR 120
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+T +N +FS +++ + I+VS+ YHLKR++L Q GI KAS S
Sbjct: 121 NTLENIKFSKKKMEDNNLSSSIIVSNKYHLKRAELLCQKEGI--KASYS 167
>gi|218290184|ref|ZP_03494343.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
gi|218239779|gb|EED06969.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
Length = 259
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 23/206 (11%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS----RIFE 99
+LL L+ +Y +P + G+ IV+LG G + A + Y R+
Sbjct: 58 LLLIPLERAY-----APPARPTGDAIVVLGAGFSAAAPDFADPAANTGTLYGDSGERVLA 112
Query: 100 TMRLYKSCKQHSMHCTIIISGGD---PQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
LY+ +H I++SGG A +++ L GV ++ ++ S
Sbjct: 113 AAALYRR-----LHLPIVLSGGPLIRANGKSYAFALIAARDLAALGVPARELYVDATSRT 167
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA------Y 210
T +NA+ +++++ + ILV+SA + R+ + F+ G+ + Y+ +
Sbjct: 168 TEENAEHTAAILHRLHRSRPILVASAAQMARAVIDFRRVGVKVEPYPVGYVASPVPTPLA 227
Query: 211 YSIIPLSANFYLTELALKEYIGILIA 236
Y+ +P A T AL E +GIL A
Sbjct: 228 YAWLPSEAGLDETCTALHEDLGILAA 253
>gi|209551623|ref|YP_002283540.1| hypothetical protein Rleg2_4052 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537379|gb|ACI57314.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 262
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS-RIFETMR 102
++++ L+ + +P P + +++LG G + R F + + R E +R
Sbjct: 59 LMMQGLEQRFAKPAADPDSLQ---CMIVLGGG--FENEVNTARHGIEFNAAADRFVEALR 113
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES--GVERDDIKLETQSLDTFQN 160
L + Q I++SGGD G+ E ++ GV +D + E QS TF+N
Sbjct: 114 LAQKFPQSR----ILVSGGDGSLSGIYEGDAAASERFFPLFGVGKDRLIEERQSRTTFEN 169
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-----LNAYYSIIP 215
A + + + N +L++S +H+ RS F+ GI+ +DY + A
Sbjct: 170 AVNTKEFLASQGLANCLLITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGRVKAGLDFTQ 229
Query: 216 LSANFYLTELALKEYIGILIAYYRGNR 242
+ N A++E+ G L+ YY R
Sbjct: 230 PNLNAQNMATAIREWYG-LVGYYLAGR 255
>gi|312870586|ref|ZP_07730701.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
gi|311093901|gb|EFQ52230.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
Length = 280
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 64 KDGNIIVLLGNGTTI--IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +V+LG G T +P + A R++ +++ + ET+ +I+SGG
Sbjct: 105 RATDYLVVLGAGLTKGQVPPVLAARLDSAYRFWKVHPETV--------------VIVSGG 150
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK---NMQGK-NII 177
D + ++ + L GV I LE+Q+ +T+QN S +I + +GK +
Sbjct: 151 DVHGDQVTQARAMADYLQRLGVVATKILLESQARNTWQNLVNSRKLIAQHWHREGKPRVT 210
Query: 178 LVSSAYHLKRSQLYFQHFGIN 198
+V+S++H+ R+ LY G+N
Sbjct: 211 VVTSSFHVPRAMLYTHRLGLN 231
>gi|317968461|ref|ZP_07969851.1| hypothetical protein SCB02_02886 [Synechococcus sp. CB0205]
Length = 266
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 24/199 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM---HC 114
L+P+ + + +V+LG G + P +P R + R+ +RL K ++
Sbjct: 70 LTPKTIPNADAVVVLGGG--LKPALPPRRGVEVSEGGDRLLTGVRLMSQKKAGTLVTSGA 127
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
I + DP AE+ E GV I S T + A+ + K
Sbjct: 128 QISFTAADPAP---AEAFSAKALAEELGVPSQRIVPNPLSKTTAEEARDIGQLAKQRGWS 184
Query: 175 NIILVSSAYHLKRSQLYFQ-HFGINTKASCSDYL-------------NAYYSIIPLSANF 220
++LV+SA+H+ RS FQ G+ D+L + ++P +
Sbjct: 185 QVLLVTSAFHMPRSLATFQRRSGLQVIPVACDFLLPERQRLGSPTPGSLVQDLLPSAEAL 244
Query: 221 YLTELALKEYIGILIAYYR 239
YL+ +ALKE++G +A YR
Sbjct: 245 YLSSVALKEHLG--LALYR 261
>gi|302524814|ref|ZP_07277156.1| predicted protein [Streptomyces sp. AA4]
gi|302433709|gb|EFL05525.1| predicted protein [Streptomyces sp. AA4]
Length = 329
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 85/177 (48%), Gaps = 30/177 (16%)
Query: 69 IVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+V+LG+G +P + A R++ + Q +Q S +++SGG
Sbjct: 161 VVVLGSGLQGDRVPPLLASRLDRAVQ--------------VQQRSPGAVLVVSGGQGADE 206
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILVSSAYH 184
+E+ L+E+GV + + LE ++ T +N +FS +++ + G I+ V++ YH
Sbjct: 207 LTSEAAAMARYLVEAGVPEEQLVLEDRATTTSENLRFSVALLAERGFSGP-ILAVTNNYH 265
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ R+ + + G+ LN I +A++++ L+E++ +L+ Y + N
Sbjct: 266 VFRTAVLARQLGLR--------LNV---IGARTASYFVPSAFLREFVALLVEYRKTN 311
>gi|168179334|ref|ZP_02613998.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|226950331|ref|YP_002805422.1| hypothetical protein CLM_3296 [Clostridium botulinum A2 str. Kyoto]
gi|182669557|gb|EDT81533.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|226841604|gb|ACO84270.1| conserved hypothetical protein [Clostridium botulinum A2 str.
Kyoto]
Length = 198
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ E +RLY II+SG ++E+ L++ G+++ I LE +S
Sbjct: 65 RLDEGLRLY----NEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSR 120
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+T +N +FS +++ + I+VS+ YHLKR++L Q GI KAS S
Sbjct: 121 NTLENIKFSKKKMEDNNLSSSIIVSNKYHLKRAELLCQKEGI--KASYS 167
>gi|157369964|ref|YP_001477953.1| hypothetical protein Spro_1721 [Serratia proteamaculans 568]
gi|157321728|gb|ABV40825.1| protein of unknown function DUF218 [Serratia proteamaculans 568]
Length = 257
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 67 NIIVLLGNGTTIIPT-IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
N IV+LG G T P P+ + S R+ E +RLY + H + G P+
Sbjct: 80 NYIVVLGGGYTFNPDWAPSSNL--IGNSLPRVTEGVRLYLA---HPGAKMVFTGAGSPKT 134
Query: 126 HGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
A + ++ ES GV R DI L + LDT Q A S ++ + ILV+SA H
Sbjct: 135 LSNAATAA---QVAESLGVPRSDIVLLDRPLDTEQEALQVSKLVGQ---QPFILVTSANH 188
Query: 185 LKRSQLYFQHFGIN------TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
L R+ +F+ G++ + + S LN + ++P + +E A E +G L
Sbjct: 189 LPRAMRFFEAKGLHPIPAPANQLAISSQLNIWDRVVPSAMFLGHSERAWYETLGSLWQRL 248
Query: 239 RGN 241
+G+
Sbjct: 249 KGS 251
>gi|77745325|gb|ABB02563.1| unknown [Lactobacillus reuteri]
Length = 271
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 102 RLYKS--CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL K+ C + II SGG QK +E+ V L+ G+ I E + L+T+Q
Sbjct: 128 RLDKAINCWKTHQSAKIIGSGGIVQKAKESEAEVMAGYLIAHGIPARKIIRENKGLNTWQ 187
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
N F+S +IK + +++V+S +H+ R++ Y + G+N
Sbjct: 188 NLAFASQLIKPQE--TVVVVTSDFHVLRARAYARKMGLN 224
>gi|312144373|ref|YP_003995819.1| protein of unknown function DUF218 [Halanaerobium sp.
'sapolanicus']
gi|311905024|gb|ADQ15465.1| protein of unknown function DUF218 [Halanaerobium sp.
'sapolanicus']
Length = 252
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
++ + IV+LG G A EPS S R+ + L+++ ++ II SGG
Sbjct: 77 EEDHPIVVLGGGNYYKTDGSA---EPSVHSKQRLAKAYELHRT-----LNTKIIYSGGVG 128
Query: 124 QKH-GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
H +E+ L G+E + + E Q+ T++NA + + + + I LV+SA
Sbjct: 129 LGHDNFSEADAAKEFLSGLGLESEKYESEDQARSTYENALYIKKWLNENEIERIYLVTSA 188
Query: 183 YHLKRSQLYFQHFGINTKASCS----DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
YH+ RS F+ I+ A S D+ ++ + +P + AL E++GI+ Y
Sbjct: 189 YHMYRSARAFRAQEIDFLAHHSGFIYDHKFSWLNYLPNRGALQVNLSALHEWVGIVWYYL 248
Query: 239 RG 240
R
Sbjct: 249 RA 250
>gi|284039129|ref|YP_003389059.1| hypothetical protein Slin_4276 [Spirosoma linguale DSM 74]
gi|283818422|gb|ADB40260.1| protein of unknown function DUF218 [Spirosoma linguale DSM 74]
Length = 272
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 43 TILLKHLQFSYQRPLLSPQWKKDGN-----IIVLLG---NGTTIIPTIPAIRIEPS---- 90
+ L+ L ++ P+ P G+ IVL G NG P P R +
Sbjct: 52 SFLVNELALWWEYPI-KPDMHAPGDSVKRVAIVLTGGMINGEREAPGKPLNRTHLARFLL 110
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGG----DPQKHGL-AESIVYNNKLLESGVER 145
+ RI + + LYK+ ++ISGG Q L E + L+ +GV
Sbjct: 111 GREADRIGQALYLYKTGAVQK----VLISGGLGSWPFQPISLNDEGHLAGELLIIAGVRP 166
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFGINTKAS 202
+DI LE +S +T +NA+FS+ +++ K +L++SA+H+KR+ FQ G+ T
Sbjct: 167 EDIMLEGKSRNTHENARFSAPILRKHFDKAHYEYVLITSAWHMKRAIACFQKEGVQTIPF 226
Query: 203 CSDYL-NAYYS-----IIPLSANFYLTELALKEYIG 232
S++L N S ++P F+ + ++E++G
Sbjct: 227 PSNFLGNRRLSGPAEWLLPDEEAFFESYYLIREFVG 262
>gi|320527634|ref|ZP_08028808.1| hypothetical protein HMPREF9430_00919 [Solobacterium moorei F0204]
gi|320131955|gb|EFW24511.1| hypothetical protein HMPREF9430_00919 [Solobacterium moorei F0204]
Length = 268
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 79/162 (48%), Gaps = 26/162 (16%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
++ +F+ + + +L +H+ F Y +V+LG G I +R P
Sbjct: 73 LVFVAFMFYSMFIQLLPRHVDFDY---------------VVVLGAGL-----IDGLR--P 110
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ +R+ + +R++ C I++SGG ++E+ L++ G++ I
Sbjct: 111 TKLLANRLDKAIRVFNKSVSS---CYIVVSGGQGSDEKVSEAEAMRTYLIDKGIKNHQII 167
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQL 190
+E +S++TFQN + S +IK G+ I +V+S +H+ R+ L
Sbjct: 168 MEDKSVNTFQNMRNSYEIIKRRGGRMRIAVVTSNFHVYRALL 209
>gi|317496202|ref|ZP_07954562.1| hypothetical protein HMPREF0432_01166 [Gemella moribillum M424]
gi|316913777|gb|EFV35263.1| hypothetical protein HMPREF0432_01166 [Gemella moribillum M424]
Length = 355
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 17/130 (13%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIISGGDPQKH 126
+V+LG G + R+ P S R+ K +S H +I+SGG
Sbjct: 173 VVVLGAG------LIGERVTPLLAS--------RIRTGIKIYSKHPGSKLIMSGGQGADE 218
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
++E+ N LE GV +DI +E +S +T +N +FS ++K++ + LV++ YH+
Sbjct: 219 VVSEAFAMKNYALEQGVSEEDIIMEDKSTNTEENIKFSKRLMKDVNSR-FALVTNYYHVY 277
Query: 187 RSQLYFQHFG 196
R+ + + G
Sbjct: 278 RALVLAKTLG 287
>gi|330505003|ref|YP_004381872.1| hypothetical protein MDS_4089 [Pseudomonas mendocina NK-01]
gi|328919289|gb|AEB60120.1| hypothetical protein MDS_4089 [Pseudomonas mendocina NK-01]
Length = 256
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 23/221 (10%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWK---KDGNIIVLLGNGTTIIPTI 82
+CF+ F + +P ++ + P L +W + + IV+LG G
Sbjct: 37 TCFVTGFGGLWLMSLPAVMQWSAGLLEREPALEEARWATLAQRADAIVILGAGREQNDPG 96
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
+P + R+ RL ++ M T + G P L+
Sbjct: 97 WGGADQPGLMALERLRYAARLARASG-LPMAATGGLHYGQPPSEA---------ALMADA 146
Query: 143 VERD---DIK-LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
++RD +I+ LE QS T++NA S+ +++ + ++LV+ A+H+ R++ F+ G
Sbjct: 147 MKRDYGLEIRWLEEQSRTTWENAVLSADLLQPQGVRRVVLVTQAWHMPRARWSFEQAGFE 206
Query: 199 TKASCSDYLNAYYS-----IIPLSANFYLTELALKEYIGIL 234
++ YL+A Y+ +P S + + L E IG+L
Sbjct: 207 VISAPMGYLSAGYARPLGGWLPESRVIWQSSQLLNEAIGLL 247
>gi|303240608|ref|ZP_07327123.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
gi|302591845|gb|EFL61578.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
Length = 259
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 62/111 (55%), Gaps = 12/111 (10%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM---Q 172
II+SGG ++E+ L+ +GV + +I +E QS +T +N + + ++I+N+ +
Sbjct: 142 IIVSGGQGFDEEVSEAFAMKEYLVSNGVNQKNIIMEEQSTNTLENIKNTKALIENLPDEK 201
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKA-SC--------SDYLNAYYSII 214
N+++V++ +HL R+++ + FG C ++YL ++++I
Sbjct: 202 SNNVLIVTNRFHLFRAKMLAERFGFKAYGMPCITPLYTIPNNYLREFFAVI 252
>gi|298370494|ref|ZP_06981810.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281954|gb|EFI23443.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 220
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LY+S + I+ +GG P+K + E+ V L+ G+ +
Sbjct: 66 QPSPVFLERINHAIALYQSHRV----GKIVFTGGTPKKGYMTEAEVGRRYALKQGIPAKN 121
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
I E S +T++N + +++ +II+VS YHL R+Q + +N + S +
Sbjct: 122 ILFENTSRNTYENLRNIKPILRANSVDSIIIVSDPYHLARAQAIARDLDLNAEVSAT 178
>gi|212694703|ref|ZP_03302831.1| hypothetical protein BACDOR_04235 [Bacteroides dorei DSM 17855]
gi|212662682|gb|EEB23256.1| hypothetical protein BACDOR_04235 [Bacteroides dorei DSM 17855]
Length = 252
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 86 RIEPSFQSYS-RIFETMRLYK-SCKQH---SMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
R P F + R+ E +RLYK C + + +II S G A + L +
Sbjct: 86 RSRPEFSEIADRLLEGIRLYKHGCIRKLVLASDGSIIESKDGKGLQGNAADM--KQYLAD 143
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVSSAYHLKRSQLYFQHFGINT 199
G+ +D+ LET++ +T++NA F+ +I N M+ ++ +L++SA H++RS F G+N
Sbjct: 144 LGMPLEDVILETRANNTWENATFTLELIGNSMKTESTLLITSATHMRRSLWTFHAAGLNP 203
Query: 200 KASCSD 205
+D
Sbjct: 204 DTYITD 209
>gi|299534801|ref|ZP_07048130.1| hypothetical protein BFZC1_02177 [Lysinibacillus fusiformis ZC1]
gi|298729646|gb|EFI70192.1| hypothetical protein BFZC1_02177 [Lysinibacillus fusiformis ZC1]
Length = 344
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 28/181 (15%)
Query: 60 PQWKKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P+ +D I++LG+G +P + A SRI + + Y + TII
Sbjct: 159 PRLNQD--FIIVLGSGLINDKVPPLLA----------SRIQKAIDFYHKQAAVTTPPTII 206
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGK 174
SGG L E+ +E G+ + E +S++T+QN FS ++ K +
Sbjct: 207 FSGGQGPDENLPEAEAMQRYAIEKGIPIEQTLQENRSVNTYQNMLFSKQLMDARKQGEAY 266
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
N I ++ +HL R+ +Y + G++++ S +A +Y ++EY+ I+
Sbjct: 267 NSIFTTNNFHLFRAGIYARLAGLDSQGIGSK-----------TAFYYWPNAMIREYVAIV 315
Query: 235 I 235
+
Sbjct: 316 V 316
>gi|223986622|ref|ZP_03636616.1| hypothetical protein HOLDEFILI_03938 [Holdemania filiformis DSM
12042]
gi|223961417|gb|EEF65935.1| hypothetical protein HOLDEFILI_03938 [Holdemania filiformis DSM
12042]
Length = 363
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK- 174
+I SGG AE+ V + LLE GV I++E QS++T++N FS ++ +M+
Sbjct: 220 LIPSGGQGPDEPRAEAEVMKDYLLEQGVPEVRIRVENQSVNTYENMVFSKKIMDSMKKNY 279
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
+ +S YH+ R+ L + GI + AY+S
Sbjct: 280 KCLFCTSDYHVFRAGLLSRKAGIRRCSGIGSRTVAYFS 317
>gi|256003507|ref|ZP_05428497.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|255992531|gb|EEU02623.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|316941425|gb|ADU75459.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
1313]
Length = 262
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 78/160 (48%), Gaps = 28/160 (17%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK--QHSMHCTIIISGGDPQKH 126
+V+LG G + RI P+FQ RL K + + + ++++GG
Sbjct: 107 LVILGAG------LKGDRITPTFQ--------YRLDKGVEYLRANPELKVVVTGGQGPGE 152
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---IILVSSAY 183
L E+ L+ G++ D I +E ++ T +N ++++ ++K + G++ I++V++ +
Sbjct: 153 DLTEAEAMKRYLVSHGIDEDRIIMEDRATSTNENMKYTAEVLKQLTGRSDYRIMIVTNDF 212
Query: 184 HLKRSQLYFQHFGI---------NTKASCSDYLNAYYSII 214
H+ R+++ +H G N + Y+ Y++++
Sbjct: 213 HMFRAKILARHNGFTPYGITVPTNPVVLVNSYIREYFAVV 252
>gi|307717857|ref|YP_003873389.1| transmembrane protein [Spirochaeta thermophila DSM 6192]
gi|306531582|gb|ADN01116.1| probable transmembrane protein [Spirochaeta thermophila DSM 6192]
Length = 249
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 79/160 (49%), Gaps = 25/160 (15%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P + +R++ +R + + ++++GG G +E + + + E G E ++
Sbjct: 98 PGVVTLARLWGGLRYARM-----LGVPLVLAGGSVWDEGKSEGEMMADLVRELGWE--EV 150
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
+E +S T++NA+ ++ M+ ++LV+SAYH++R+ F+ G+ + D+ +
Sbjct: 151 VVEGESRTTWENARNTARMVGR---GPVLLVTSAYHMQRAVWCFRAQGVEVIPAPVDFRD 207
Query: 209 AYYSIIPLSANFYL---------TELALKEYIGILIAYYR 239
P FYL + AL+EY+G++ +YR
Sbjct: 208 ER----PAHWIFYLGISAEAARDVQAALREYVGMV--WYR 241
>gi|218682013|ref|ZP_03529614.1| hypothetical protein RetlC8_24195 [Rhizobium etli CIAT 894]
Length = 262
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS-RIFETMR 102
+L++ L+ + +P P+ N+ ++ G + R F + + R E +R
Sbjct: 59 LLMQGLEQRFTKPAADPE-----NLQCMIVLGGAFENEVNTARHGIEFNAAADRFVEALR 113
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES--GVERDDIKLETQSLDTFQN 160
L + Q I++SGGD G+ E ++ G+ +D + ETQS TF+N
Sbjct: 114 LAQKFPQSR----ILVSGGDGSLSGVYEGDAAASERFFPLFGIGKDRLIEETQSRTTFEN 169
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY-------YSI 213
A + + + + +L++S +H+ RS F+ G +A +DY Y+
Sbjct: 170 AVNTKEFLASQGLSHCLLITSGFHMPRSVGIFRKLGTRYRALPTDYRTDGAVRPGLDYTQ 229
Query: 214 IPLSANFYLTELALKEYIGILIAYYRGNR 242
L+A T A++E+ G L+ YY R
Sbjct: 230 PNLNAQNMAT--AIREWYG-LVGYYLAGR 255
>gi|330953011|gb|EGH53271.1| hypothetical protein PSYCIT7_16874 [Pseudomonas syringae Cit 7]
Length = 256
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 31/196 (15%)
Query: 56 PLLSPQWK---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI---FETMRLYKSCKQ 109
PL QW + + IV+LGNG R P++ + + E +RL +
Sbjct: 67 PLPQQQWATLAQQADAIVVLGNGRE--------RNSPTWGADTPTGLGLERLRLAARLAK 118
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL-----ETQSLDTFQNAQFS 164
S I+ SGG +E+ + L +DD + E S T++NA S
Sbjct: 119 ES-GLPILTSGGLHFDQPPSEAAIMAQSL------QDDFAVTVRWQEGLSRTTWENATMS 171
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSAN 219
+++++ K ++LV+ A+H+ R++ F+ G ++ YL + +P S
Sbjct: 172 AAVLQPQGIKRVVLVTQAWHMPRARWSFEQAGFTVVSAPVGYLGVDNARPFGGWLPESRV 231
Query: 220 FYLTELALKEYIGILI 235
F + + L E G+L+
Sbjct: 232 FTQSGMLLNEAAGLLV 247
>gi|296393440|ref|YP_003658324.1| hypothetical protein Srot_1020 [Segniliparus rotundus DSM 44985]
gi|296180587|gb|ADG97493.1| protein of unknown function DUF218 [Segniliparus rotundus DSM
44985]
Length = 344
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV LG G ++P + +E R+ +T+ L + + S II++GG PQ +GL
Sbjct: 180 IVTLGAGLRPDGSMPQVLLE-------RLKKTLDLALADPEAS----IIVTGGKPQ-NGL 227
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ + L+ GV+ + E +S T QNA S+S++++++ +++V+SA H +R+
Sbjct: 228 TEADAMADWLVGQGVDPARVHKEDRSASTVQNALNSASILRSLKPSQLVVVTSANHARRA 287
Query: 189 QLYFQ 193
+
Sbjct: 288 SALLE 292
>gi|251779225|ref|ZP_04822145.1| integral membrane protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243083540|gb|EES49430.1| integral membrane protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 348
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ I++LG+G + R+ P S RI + + Y + II SGG
Sbjct: 165 DFIIVLGSG------LIGERVPPLLAS--RIDKAIEFYNKQGTVTNPPKIIFSGGQGSDE 216
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI--ILVSSAYH 184
++E++ + G+ +D LE +S++T QN FS ++ N I V++ +H
Sbjct: 217 KISEALAMQRYATQKGIPIEDTILEDKSVNTLQNMIFSKKIMDNSTPNTYASIFVTNNFH 276
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
L R+ ++ + G+ ++ S +A ++L ++EYI ++ Y +
Sbjct: 277 LFRAGIFARKAGLKSQGIGSR-----------TAFYFLPNAMIREYIAFVVMYKK 320
>gi|303253664|ref|ZP_07339802.1| hypothetical protein APP2_0852 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248075|ref|ZP_07530104.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|302647584|gb|EFL77802.1| hypothetical protein APP2_0852 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855473|gb|EFM87647.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
Length = 246
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 22/235 (9%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
W+F ++ YW +++KI + F+ + S + P + K L+ + K
Sbjct: 22 WLFSLICYWL----NLKKISYSLAFLGIGSLYLFST-PYVATKLTDSLVTEDNLALEDYK 76
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
IV+LG G + I ++ E MR Y + Q ++I+G P
Sbjct: 77 KAQAIVVLGGGVR-----DSKEIYNPIAVGNQALERMR-YAAYLQKETQLPLLITGSSP- 129
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+G +E+ N+ + LE ++ T +NAQFS ++ IILV++ +H
Sbjct: 130 -NGTSEAKTMANEF-QYFFSVSTQWLEEKAKTTKENAQFSRELLAKEGINKIILVTNQWH 187
Query: 185 LKRSQLYFQHFG-------INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+KR+++ F+ G I + ++Y+N Y IP S L+LKE++G
Sbjct: 188 MKRAKMLFEKQGFEVLPASIGHGVTPTEYINFAY-FIPQSGAMDSIMLSLKEWLG 241
>gi|125974276|ref|YP_001038186.1| hypothetical protein Cthe_1772 [Clostridium thermocellum ATCC
27405]
gi|281418329|ref|ZP_06249349.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
gi|125714501|gb|ABN52993.1| protein of unknown function DUF218 [Clostridium thermocellum ATCC
27405]
gi|281409731|gb|EFB39989.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
Length = 262
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 78/160 (48%), Gaps = 28/160 (17%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK--QHSMHCTIIISGGDPQKH 126
+V+LG G + RI P+FQ RL K + + + ++++GG
Sbjct: 107 LVILGAG------LKGDRITPTFQ--------YRLDKGVEYLRANPELKVVVTGGQGPGE 152
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---IILVSSAY 183
L E+ L+ G++ D I +E ++ T +N ++++ ++K + G++ I++V++ +
Sbjct: 153 DLTEAEAMKRYLVSHGIDEDRIIMEDRATSTNENMKYTAEVLKQLTGRSDYRIMIVTNDF 212
Query: 184 HLKRSQLYFQHFGI---------NTKASCSDYLNAYYSII 214
H+ R+++ +H G N + Y+ Y++++
Sbjct: 213 HMFRAKILARHNGFTPYGITAPTNPVVLVNSYIREYFAVV 252
>gi|300312530|ref|YP_003776622.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
gi|300075315|gb|ADJ64714.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
Length = 269
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERD---DIK-LETQSLDTFQNAQFSSSMIKNM 171
I+++GG+P +E+ V L ERD ++ E +S T+ NA S++M+K
Sbjct: 142 ILVTGGNPDGSPESEAAVMARTL-----ERDFAVPVRWQEGRSNTTYDNATLSAAMLKEA 196
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII----PLSANFYLTELAL 227
I+LV+ + H+ R+ F G+ +A+ + + + + P +A+ L AL
Sbjct: 197 GISRILLVTDSLHMPRAMQVFATTGLQVQAAPTVFAGQARTRVTDYLPNAASLQLASYAL 256
Query: 228 KEYIGILIAYYR 239
+E+IG L +YR
Sbjct: 257 REWIGQL--WYR 266
>gi|304316432|ref|YP_003851577.1| hypothetical protein Tthe_0963 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777934|gb|ADL68493.1| protein of unknown function DUF218 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 191
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P F+ R+ E ++LYK + II+SGG ++E+ LL++G+ + +
Sbjct: 51 PFFKE--RLSEAIKLYK----EGLGKYIIVSGGKGPGEDISEAEAGKEYLLKNGITDNVV 104
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
++ S T QN + S ++ K I+VS+ +HLKR+ + + GIN
Sbjct: 105 LMDDGSYSTLQNLENSKKIMDEKSLKTAIIVSNKFHLKRASIIAKEAGINA 155
>gi|332968000|gb|EGK07087.1| protein of hypothetical function DUF218 [Desmospora sp. 8437]
Length = 190
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS R+ + LY H II G G++E+ L+E GV D
Sbjct: 54 QPSPALRERLQMALSLY-----HKGQVQWIICSGGVGDDGISEAEGMKRYLMEQGVPPKD 108
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ LE +S +T +N Q+S ++K +NI LV+ YH+ RS + GI + +
Sbjct: 109 LLLEEESTNTKENLQYSKKLLKPNDIQNIYLVTHDYHMYRSLALARQAGIRAEPA 163
>gi|187934001|ref|YP_001887179.1| integral membrane protein [Clostridium botulinum B str. Eklund 17B]
gi|187722154|gb|ACD23375.1| integral membrane protein [Clostridium botulinum B str. Eklund 17B]
Length = 348
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 80/175 (45%), Gaps = 21/175 (12%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ I++LG+G + R+ P S RI + + Y + II SGG
Sbjct: 165 DFIIVLGSG------LIGERVPPLLAS--RIDKAIEFYNKQGAVTNPPKIIFSGGQGSDE 216
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYH 184
++E++ ++ G+ ++ LE +S++T QN FS ++ N I V++ +H
Sbjct: 217 KISEALAMQRYAVQKGIPIENTILEDKSVNTLQNMMFSKKIMDNSTPNTHTSIFVTNNFH 276
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
L R+ ++ + G+ ++ S +A ++L ++EYI ++ Y +
Sbjct: 277 LFRAGIFARKAGLKSQGIGSK-----------TAFYFLPNAMIREYIAFVVMYKK 320
>gi|153938260|ref|YP_001392181.1| hypothetical protein CLI_2956 [Clostridium botulinum F str.
Langeland]
gi|152934156|gb|ABS39654.1| conserved hypothetical protein [Clostridium botulinum F str.
Langeland]
Length = 197
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ E +RLY II+SG ++E+ L++ G+++ I LE +S
Sbjct: 65 RLDEGLRLY----NEGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSR 120
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+T +N +FS +++ + I+VS+ YHLKR++L Q GI S
Sbjct: 121 NTLENIKFSKKKMEDNNLSSSIIVSNKYHLKRAELLCQKEGIRASYS 167
>gi|115380347|ref|ZP_01467350.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|115362646|gb|EAU61878.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
Length = 233
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQS-YSRIFETMRLYKSCKQHSMHCTIIISGG--DP 123
+ +++LG G + P P + + RI L + + +++SGG D
Sbjct: 55 DAVIVLGGG--LDPDATERSGRPEYNAAVERILRGYELLREGRARH----VLLSGGSLDT 108
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ + E+ V +LL G+ + I +E S +T +NA S +I+ K ++L++SA
Sbjct: 109 RPEAVIEATVLQRQLLAWGIAPERIVVEGHSRNTRENALDSKKLIEERGWKTLLLITSAA 168
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYY----SIIPLSANFYLTELALKEYIGILIAYYR 239
HL R+ F G+ +D + S +P + + + AL+E G ++ R
Sbjct: 169 HLPRAYGCFAAVGLRPDTLAADVRASDGKRPPSWLPRANHLSASTDALRELAGRVVYRLR 228
Query: 240 G 240
G
Sbjct: 229 G 229
>gi|15599180|ref|NP_252674.1| hypothetical protein PA3985 [Pseudomonas aeruginosa PAO1]
gi|107103503|ref|ZP_01367421.1| hypothetical protein PaerPA_01004573 [Pseudomonas aeruginosa PACS2]
gi|9950176|gb|AAG07372.1|AE004816_8 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Length = 253
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIE-PSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P + + IV+LG G PA + PS + R+ RL K+ ++I
Sbjct: 74 PGLAQRADAIVILGAGRQT--NDPAWGDDAPSLLAAERLRYAARLAKTSA-----LPVLI 126
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ-----SLDTFQNAQFSSSMIKNMQG 173
SGG +E+ + N LL+ D + T+ S T++NA S+ ++
Sbjct: 127 SGGLHYGRPPSEAALMANALLQ------DFGVPTRWQEGLSRTTWENATLSAPQLREAGV 180
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALK 228
+ ++LV+ A+H++R++ F+ G + +L + +P + F+ + + L
Sbjct: 181 RRVVLVTQAWHMQRARWSFERQGFEVIPAPVGFLGGANLRPFGGWLPEAQAFWQSGMLLN 240
Query: 229 EYIGIL 234
E IG++
Sbjct: 241 EAIGLV 246
>gi|218889732|ref|YP_002438596.1| hypothetical protein PLES_09901 [Pseudomonas aeruginosa LESB58]
gi|254236878|ref|ZP_04930201.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254242671|ref|ZP_04935993.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|313109425|ref|ZP_07795385.1| hypothetical protein PA39016_001790025 [Pseudomonas aeruginosa
39016]
gi|126168809|gb|EAZ54320.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126196049|gb|EAZ60112.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218769955|emb|CAW25717.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
gi|310881887|gb|EFQ40481.1| hypothetical protein PA39016_001790025 [Pseudomonas aeruginosa
39016]
Length = 253
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIE-PSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P + + IV+LG G PA + PS + R+ RL K+ ++I
Sbjct: 74 PGLAQRADAIVILGAGRQT--NDPAWGDDAPSLLAAERLRYAARLAKTSA-----LPVLI 126
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ-----SLDTFQNAQFSSSMIKNMQG 173
SGG +E+ + N LL+ D + T+ S T++NA S+ ++
Sbjct: 127 SGGLHYGRPPSEAALMANALLQ------DFGVPTRWQEGLSRTTWENATLSAPQLREAGV 180
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALK 228
+ ++LV+ A+H++R++ F+ G + +L + +P + F+ + + L
Sbjct: 181 RRVVLVTQAWHMQRARWSFERQGFEVIPAPVGFLGGANLRPFGGWLPEAQAFWQSGMLLN 240
Query: 229 EYIGIL 234
E IG++
Sbjct: 241 EAIGLV 246
>gi|218509953|ref|ZP_03507831.1| hypothetical protein RetlB5_22095 [Rhizobium etli Brasil 5]
Length = 262
Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 104/265 (39%), Gaps = 38/265 (14%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTI--------------------L 45
+FLI + CQ + F + F L+ + W + + L
Sbjct: 1 MFLISKLVWIFCQPLSLAFLLVFFALVAGLLRWRALSIVAATASALILFVTLYTTAGNLL 60
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS-RIFETMRLY 104
++ L+ + +P P+ N+ ++ G + R F + R E +RL
Sbjct: 61 MQGLEQRFAKPAADPE-----NLQCMIVLGGAFENEVNTARHGIEFNGGADRFVEALRL- 114
Query: 105 KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES--GVERDDIKLETQSLDTFQNAQ 162
Q I++SGGD G+ E ++ G+ R+ + ETQS TF+NA
Sbjct: 115 ---AQKFPDSRILVSGGDGSMSGIYEGDAAASERFFPLFGIGRERLIEETQSRTTFENAV 171
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-----LNAYYSIIPLS 217
+ + + + +L++S +H+ RS F+ GI+ +DY + +
Sbjct: 172 NTREFLASQGLSHCLLITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRPGLDFTQPN 231
Query: 218 ANFYLTELALKEYIGILIAYYRGNR 242
N A++E+ G L+ YY R
Sbjct: 232 LNAQNMATAIREWYG-LVGYYLAGR 255
>gi|81429248|ref|YP_396249.1| hypothetical protein LSA1636 [Lactobacillus sakei subsp. sakei 23K]
gi|78610891|emb|CAI55943.1| Hypothetical protein LCA_1636 [Lactobacillus sakei subsp. sakei
23K]
Length = 277
Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 28/181 (15%)
Query: 60 PQWKKDGNIIVLLGNG---TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P++ +D I++LG+G +P + A RIE + Y R K+ +
Sbjct: 91 PRYNQD--YIIVLGSGLIDGQYVPPLLASRIERAMTFYHR---------QVKKGRPAPKL 139
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN- 175
+ SGG L ES+ ++ G+ + E +S++T QN QFS +I+ K+
Sbjct: 140 VFSGGQGGDEKLPESVAMQRYAIDHGIPVEQTLTEEKSVNTLQNMQFSKQIIEADTDKDK 199
Query: 176 --IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
II ++ YH R+ L+ + + + ++ ++L ++E+I I
Sbjct: 200 PRIIFSTNNYHTFRAGLFAKQAHLKADGIGAK-----------TSKYFLPNATIREFIAI 248
Query: 234 L 234
L
Sbjct: 249 L 249
>gi|289522163|ref|ZP_06439017.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503999|gb|EFD25163.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 254
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+++P D IV+LG G T + E S + R+F + L + I
Sbjct: 69 MVAPSLPADKAAIVVLGGGQRR--TSDPDKAEVSPHTLMRLFGGIEL-----ALKFNWPI 121
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++ GG + E++ K+ E + I E+QS T++N + +SS++++++ K+
Sbjct: 122 LLCGGS-YSQEVPEAMTMAKKVKELFPDLP-IYEESQSRTTWENIKNASSILRSLELKHA 179
Query: 177 ILVSSAYHLKRSQLYFQHFGINTK------ASCSDYLNAYYSII---PLSANFYLTELAL 227
+LV+ YH+ R+ L Q +D NA SII P +++ ++ LAL
Sbjct: 180 VLVTHGYHMPRAHLIAQGLAPEINWHPFPVGKMAD--NAPLSIIDFLPGASSLHINSLAL 237
Query: 228 KEYIGILIAY 237
KE++GI IAY
Sbjct: 238 KEHVGI-IAY 246
>gi|152985105|ref|YP_001346509.1| hypothetical protein PSPA7_1123 [Pseudomonas aeruginosa PA7]
gi|150960263|gb|ABR82288.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 253
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 16/182 (8%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIE-PSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P + + IV+LG G + PA + PS + R+ RL ++ ++
Sbjct: 74 PGLAQRADAIVILGAGRQT--SDPAWGDDAPSLLAAERLRYAARLARASS-----LPVLT 126
Query: 119 SGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
SGG +E+ + N LLE GV E S T++NA S+ ++ + ++
Sbjct: 127 SGGLHYGRPPSEAALMANALLEDFGVPAR--WQEGLSRTTWENATLSAPQLREAGVRRVV 184
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIG 232
LV+ A+H++R++ F+ G + +L + +P + F+ + + L E +G
Sbjct: 185 LVTQAWHMQRARWSFERQGFEVIPAPVGFLGGANLRPFGGWLPEAQAFWQSGMLLNEAVG 244
Query: 233 IL 234
+L
Sbjct: 245 LL 246
>gi|113970950|ref|YP_734743.1| hypothetical protein Shewmr4_2615 [Shewanella sp. MR-4]
gi|113885634|gb|ABI39686.1| protein of unknown function DUF218 [Shewanella sp. MR-4]
Length = 244
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG--GDPQK 125
++++LG+ + IP A++ S + +R+ E +R Q CT+++SG G+ +
Sbjct: 78 VVMVLGSAHSDIPGATAVQ-SLSAVALARLTEGLRQL----QLGQDCTLVVSGWEGELTQ 132
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
H AE V +E GV+ I DT + A + N + + LV+SA H+
Sbjct: 133 HPHAE--VMAKAAVELGVDASRIVQLPLPRDTIEEAHYFKEHFGN---QAVRLVTSASHM 187
Query: 186 KRSQLYFQHFGINTKASCSDY--LNAYYSIIPLSANFYLTELALKEYIGIL 234
RS F G+ A+ +D+ + +Y + + N ++ A+ EYIG L
Sbjct: 188 PRSMAIFSGQGLTASAAPTDFRARDGFYWRL-TADNLLASQRAIHEYIGRL 237
>gi|52143179|ref|YP_083650.1| hypothetical protein BCZK2058 [Bacillus cereus E33L]
gi|51976648|gb|AAU18198.1| conserved hypothetical protein [Bacillus cereus E33L]
Length = 185
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 72 AKVIVSGGQGEDEDIPEAHSMRNYLMARGIDESRILIEDQSTNTYENVKFSMDLY---DV 128
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 129 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 160
>gi|46143765|ref|ZP_00134210.2| COG1434: Uncharacterized conserved protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208505|ref|YP_001053730.1| hypothetical protein APL_1031 [Actinobacillus pleuropneumoniae L20]
gi|303251036|ref|ZP_07337222.1| hypothetical protein APP6_0335 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307245941|ref|ZP_07528024.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307250279|ref|ZP_07532233.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307252669|ref|ZP_07534561.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|126097297|gb|ABN74125.1| hypothetical protein APL_1031 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|302650046|gb|EFL80216.1| hypothetical protein APP6_0335 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306853160|gb|EFM85382.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306857720|gb|EFM89822.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306859845|gb|EFM91866.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 246
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 102/236 (43%), Gaps = 24/236 (10%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
W+F ++ YW L + + F+ L LFS P + K L+ +
Sbjct: 22 WLFSLICYWLNLKKISYSLAFLGIGSLYLFS------TPYVATKLTDSLVTEDNLTLEDY 75
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IV+LG G + I ++ E MR Y + Q ++I+G P
Sbjct: 76 KKAQAIVVLGGGVR-----DSKEIYNPIAVGNQALERMR-YAAYLQKETQLPLLITGSSP 129
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+G +E+ N+ + LE ++ T +NAQFS ++ IILV++ +
Sbjct: 130 --NGTSEAKTMANEF-QYFFSVPTQWLEEKAKTTKENAQFSRELLAKEGINKIILVTNQW 186
Query: 184 HLKRSQLYFQHFG-------INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
H+KR+++ F+ G I + ++Y+N Y IP S L+LKE++G
Sbjct: 187 HMKRAKMLFEKQGFEVLPASIGHGVTPAEYINFAY-FIPQSGAMDSIMLSLKEWLG 241
>gi|307261514|ref|ZP_07543183.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306868797|gb|EFN00605.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 246
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 22/235 (9%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
W+F ++ YW +++KI + F+ + S + P + K L+ + K
Sbjct: 22 WLFSLICYWL----NLKKISYSLAFLGIGSLYLFST-PYVATKLTDSLVTEDNLTLEDYK 76
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
IV+LG G + I ++ E MR Y + Q ++I+G P
Sbjct: 77 KAQAIVVLGGGVR-----DSKEIYNPIAVGNQALERMR-YAAYLQKETQLPLLITGSSP- 129
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+G +E+ N+ + LE ++ T +NAQFS ++ IILV++ +H
Sbjct: 130 -NGTSEAKTMANEF-QYFFSVPTQWLEEKAKTTKENAQFSRELLAKEGINKIILVTNQWH 187
Query: 185 LKRSQLYFQHFG-------INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+KR+++ F+ G I + ++Y+N Y IP S L+LKE++G
Sbjct: 188 MKRAKMLFEKQGFEVLPASIGHGVTPTEYINFAY-FIPQSGAMDSIMLSLKEWLG 241
>gi|54309547|ref|YP_130567.1| hypothetical protein PBPRA2380 [Photobacterium profundum SS9]
gi|46913983|emb|CAG20765.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 284
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L +I L++ W + + F F+ +F + + I T LL+ L+ Q P +
Sbjct: 19 LILGFIGLLI-LWFTRRKGLASGFIAFAFLGIF-MVSFQPIATSLLRPLETENQ-PFVPS 75
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D I++LG+G I +P I E S + R+ E MR+Y+ + + G
Sbjct: 76 STPVD--YIMVLGSGHVIDKAMP-ITSELSRAALMRLSEGMRIYRLFPGSKLILSGYGGG 132
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D ++++ + L GV + DI L + DT++ A ++S++ + KN++LV+
Sbjct: 133 SD-----ISQARMMAKVALALGVNKSDILLLETARDTWEEAFQAASVVGD---KNMVLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL 207
SA H+ R+ F G+ + +++L
Sbjct: 185 SASHMTRALYEFNQAGLTPTPAPTNFL 211
>gi|313609567|gb|EFR85104.1| integral membrane protein [Listeria monocytogenes FSL F2-208]
Length = 157
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 105 KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
K + T I+SGG ++E+ + L+ G++ I +E QS++T QN QFS
Sbjct: 9 KQYSKTGKRATFIVSGGQGANETVSEAQAMRDYLISKGIDETFIIMEDQSVNTLQNMQFS 68
Query: 165 -SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLT 223
+ M M N + ++ +HL R+ LY + G+ ++ I +A +Y+
Sbjct: 69 KAKMDAIMPVYNSLFSTNNFHLFRAGLYARKAGLKSQG-----------IGAKTALYYMP 117
Query: 224 ELALKEYIGILIAYYR 239
++E+I I + Y +
Sbjct: 118 NALIREFIAITVMYKK 133
>gi|190150356|ref|YP_001968881.1| hypothetical protein APP7_1087 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307254915|ref|ZP_07536737.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307259356|ref|ZP_07541083.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307263699|ref|ZP_07545307.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189915487|gb|ACE61739.1| hypothetical protein APP7_1087 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306862156|gb|EFM94128.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306866592|gb|EFM98453.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306870953|gb|EFN02689.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 246
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 102/236 (43%), Gaps = 24/236 (10%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
W+F ++ YW L + + F+ L LFS P + K L+ +
Sbjct: 22 WLFSLICYWLNLKKISYSLAFLGIGSLYLFS------TPYVATKLTDSLVTEDNLALEDY 75
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IV+LG G + I ++ E MR Y + Q ++I+G P
Sbjct: 76 KKAQAIVVLGGGVR-----DSKEIYNPIAVGNQALERMR-YAAYLQKETQLPLLITGSSP 129
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+G +E+ N+ + LE ++ T +NAQFS ++ IILV++ +
Sbjct: 130 --NGTSEAKTMANEF-QYFFSVPTQWLEEKAKTTKENAQFSRELLAKEGINKIILVTNQW 186
Query: 184 HLKRSQLYFQHFG-------INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
H+KR+++ F+ G I + ++Y+N Y IP S L+LKE++G
Sbjct: 187 HMKRAKMLFEKQGFEVLPASIGHGVTPAEYINFAY-FIPQSGAMDSIMLSLKEWLG 241
>gi|332307549|ref|YP_004435400.1| hypothetical protein Glaag_3198 [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332174878|gb|AEE24132.1| protein of unknown function DUF218 [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 251
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 15/220 (6%)
Query: 25 FMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
++SC +L+ F + P++LL K L+ Y +S + ++ + IV+L +P
Sbjct: 39 WLSCLPILWVFFCSLVYPSVLLIKPLEDQYPTVKVSSKLWQNADAIVVLACNHFDDEGLP 98
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-G 142
+ P + R +YK H I ++ G + A YN L + G
Sbjct: 99 FVSRWPQC-TMQRNLHAALMYKE-----KHLPIHLAAGILNELDSASQAHYNKTFLMTLG 152
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V +DI Q DT + +KN K + LV+SA HL R+ YF+ I
Sbjct: 153 VSPNDIYTHPQGHDTESEVDALAPHLKN---KYVALVTSASHLPRAVQYFELHDIKVLPI 209
Query: 203 CSDYL---NAYYSI-IPLSANFYLTELALKEYIGILIAYY 238
++L N ++I +P + + Y +E A+ EY+G++ Y
Sbjct: 210 PVEHLSRKNVSFTIGLPNAFSLYRSERAIHEYLGLIYQRY 249
>gi|146318649|ref|YP_001198361.1| hypothetical protein SSU05_0995 [Streptococcus suis 05ZYH33]
gi|146320855|ref|YP_001200566.1| hypothetical protein SSU98_1008 [Streptococcus suis 98HAH33]
gi|253751768|ref|YP_003024909.1| hypothetical protein SSUSC84_0901 [Streptococcus suis SC84]
gi|253753592|ref|YP_003026733.1| membrane protein [Streptococcus suis P1/7]
gi|253755527|ref|YP_003028667.1| membrane protein [Streptococcus suis BM407]
gi|145689455|gb|ABP89961.1| Uncharacterized conserved protein [Streptococcus suis 05ZYH33]
gi|145691661|gb|ABP92166.1| Uncharacterized conserved protein [Streptococcus suis 98HAH33]
gi|251816057|emb|CAZ51677.1| putative membrane protein [Streptococcus suis SC84]
gi|251817991|emb|CAZ55773.1| putative membrane protein [Streptococcus suis BM407]
gi|251819838|emb|CAR45817.1| putative membrane protein [Streptococcus suis P1/7]
gi|319758117|gb|ADV70059.1| hypothetical protein SSUJS14_0982 [Streptococcus suis JS14]
Length = 336
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 22/200 (11%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ QS+ I S F ++F ++G+ + I++ L L + + +V+LG G
Sbjct: 118 VVQSLSAI---SFFNMVFVYVGFFVSYAIIISMLYTMSSFVNLVNFFPGKLDYVVVLGAG 174
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
P + SRI + + +Y Q +I+SGG +AE
Sbjct: 175 LIGDKVTPLLA--------SRIEKGIAIY----QKQPGSKLIMSGGQGPDELIAEGQAMA 222
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS-----QL 190
N LE GV +DI +E QS +T +N +FS +++K G LV++ YH+ R+ QL
Sbjct: 223 NYALEKGVPAEDILIENQSTNTEENLKFSYALMK--PGSRFALVTNYYHVFRALLLARQL 280
Query: 191 YFQHFGINTKASCSDYLNAY 210
+ G K LNA+
Sbjct: 281 RIKCIGYGAKTKFYFSLNAF 300
>gi|323342995|ref|ZP_08083226.1| hypothetical protein HMPREF0357_11407 [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322463059|gb|EFY08254.1| hypothetical protein HMPREF0357_11407 [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 346
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 91/219 (41%), Gaps = 42/219 (19%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT---TIIPTIP 83
SCF +F FI + L S+ P KD + I++LG+G T +P +
Sbjct: 145 SCFYFIFVFINF----------LSSSFLYQFFKPH--KDRDFIIVLGSGLRNGTEVPPLL 192
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
A RI+ + + Y ++ +I SGG + + E + L G+
Sbjct: 193 AARIDVALEYY-------------HHQTVPPRLIFSGGQGEDECVPEGQAMRDYALNRGI 239
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---IILVSSAYHLKRSQLYFQHFGINTK 200
+ET+S T++N FS ++ + + + S+ +H+ R+ Y + G++
Sbjct: 240 PESHALMETRSTTTYENMLFSKEIMDTYEFDHPYTCLFSSNTFHIFRASQYARRVGLDAH 299
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +A +++ ++E+I +++ + R
Sbjct: 300 GIGAK-----------TAGYFVPNALIREFIALMVMHRR 327
>gi|307150072|ref|YP_003885456.1| hypothetical protein Cyan7822_0130 [Cyanothece sp. PCC 7822]
gi|306980300|gb|ADN12181.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7822]
Length = 278
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV I ++ SL+T++N ++ K ++LV+SA H+ RS L F+ GI+
Sbjct: 164 GVPPSAILQDSTSLNTYENVVNVKKILNEKGIKRVLLVTSALHMPRSLLIFKKQGIDVIP 223
Query: 202 SCSDYL--------------NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +D+L ++IP + T ALKEYIG++I +G
Sbjct: 224 APTDFLVSQPELEQSDLSVETIMLNLIPDAGRLEGTTKALKEYIGMVIYRLKG 276
>gi|262171274|ref|ZP_06038952.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio mimicus MB-451]
gi|261892350|gb|EEY38336.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio mimicus MB-451]
Length = 277
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTII 79
C ++LFS G + + T LL L+ +Y L +G I +++LGNG +
Sbjct: 38 GCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL-----PVEGTIDYVMVLGNGHVVD 92
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
IP E S + R+ E +R+ + M + G + + + + L
Sbjct: 93 DDIPPTS-ELSRAALMRLTEGIRISRMYPGSKMILSGYAGGSE-----FSHARMMARVAL 146
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV + DI L + DT++ A+ +++ + Q K ++LV+SA H+KR+ F+ G+
Sbjct: 147 ALGVPKSDIILLETAKDTWEEARQAAAFV---QQKRMVLVTSASHMKRAMREFESAGLTP 203
Query: 200 KASCSDYLN 208
+ ++YL
Sbjct: 204 IPAPTNYLG 212
>gi|255068087|ref|ZP_05319942.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
gi|255047685|gb|EET43149.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
Length = 195
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 25/183 (13%)
Query: 39 GIIPTILLKH-----LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
G+IP +L+ L + + + Q K +I V+LGN R +P+
Sbjct: 8 GLIPLLLIWETSVAWLHYQAVQAEKASQNIKPADIAVILGNSVNR-------RGKPNPCL 60
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
SR+ + LY+ K + ++SGG G E+ + ++ G+ + I++E +
Sbjct: 61 RSRVEAGVALYRQNKVSGL----LMSGGT-DGDGSNEAAAMQSMAIDMGIPPEHIRIENK 115
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ-LYFQHF-GINTK----ASCSDYL 207
S TF+N S+ +++++ N+I+VS A+HL R++ L +H G N + SC D
Sbjct: 116 SESTFENIALSAPLLQDVS--NVIIVSDAFHLARAEWLVNRHLKGKNVQFYASGSCGDST 173
Query: 208 NAY 210
Y
Sbjct: 174 PNY 176
>gi|227515109|ref|ZP_03945158.1| membrane protein [Lactobacillus fermentum ATCC 14931]
gi|227086441|gb|EEI21753.1| membrane protein [Lactobacillus fermentum ATCC 14931]
Length = 308
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ + LY+ + + I+SGG E++ + + GV + I+LET S
Sbjct: 166 RLLGGLALYQRFPKAEL----IMSGGQGDDEPEPEAVAMHRFARQKGVPKSAIRLETNST 221
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+T N + I + G ++LV+S YHL RS LY + G+N +
Sbjct: 222 NTATNLSEAKRFINS--GDRVVLVTSDYHLLRSLLYARRQGVNCQG 265
>gi|324998768|ref|ZP_08119880.1| hypothetical protein PseP1_08384 [Pseudonocardia sp. P1]
Length = 346
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 31/177 (17%)
Query: 63 KKDGNIIVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG+G + +P + A RI R M +++SG
Sbjct: 168 DRPADWVVVLGSGLHGSAVPPLLADRIRAGMTELDRRGARM--------------LVLSG 213
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK---NMQGKNII 177
G LAE ++ G + ++ ET S T QN + S +++ + G +I
Sbjct: 214 GKGDDERLAEGEAMRRWAVDHGADPALLRAETASRTTEQNLRLSDELVRGDPDPAGPGLI 273
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
V+S YH+ R+ + + G++ +A+ + +A +Y L+E++ IL
Sbjct: 274 -VTSDYHVFRAAVLARRLGVDAQAAGAP-----------TAGYYWPSAVLREFVAIL 318
>gi|298527828|ref|ZP_07015232.1| protein of unknown function DUF218 [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511480|gb|EFI35382.1| protein of unknown function DUF218 [Desulfonatronospira
thiodismutans ASO3-1]
Length = 256
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG+G + +P + S S SR+ E +R+ K T++ +GG ++ +
Sbjct: 85 IVVLGSGHFLQEGLPPNALL-SQSSLSRVVEGIRI----KNMYPDSTLVFTGGR-FRYPV 138
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
A S + +E G++ +DI + ++ DT A + ++ + ++ +LV+SA H+ RS
Sbjct: 139 ASSELAALASVELGIDENDILVVAEAKDTEDEASLARDIVGD---ESFVLVTSASHMHRS 195
Query: 189 QLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ F+ G++ S +D+ L + P + TE E +G+ A RG
Sbjct: 196 MIIFKSEGMDPIPSPTDFRAPDKLYNLWDYFPSAGALAKTERVFYERLGLAWAMIRG 252
>gi|296387487|ref|ZP_06876962.1| hypothetical protein PaerPAb_05012 [Pseudomonas aeruginosa PAb1]
Length = 222
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIE-PSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P + + IV+LG G PA + PS + R+ RL K+ ++I
Sbjct: 43 PGLAQRADAIVILGAGRQT--NDPAWGDDAPSLLAAERLRYAARLAKTSA-----LPVLI 95
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ-----SLDTFQNAQFSSSMIKNMQG 173
SGG +E+ + N LL+ D + T+ S T++NA S+ ++
Sbjct: 96 SGGLHYGRPPSEAALMANALLQ------DFGVPTRWQEGLSRTTWENATLSAPQLREAGV 149
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALK 228
+ ++LV+ A+H++R++ F+ G + +L + +P + F+ + + L
Sbjct: 150 RRVVLVTQAWHMQRARWSFERQGFEVIPAPVGFLGGANLRPFGGWLPEAQAFWQSGMLLN 209
Query: 229 EYIGIL 234
E IG++
Sbjct: 210 EAIGLV 215
>gi|325000419|ref|ZP_08121531.1| hypothetical protein PseP1_16707 [Pseudonocardia sp. P1]
Length = 334
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 20/172 (11%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ +V+LG G P +R SR+ + L + ++ SGG
Sbjct: 160 DFVVVLGAGLIRGKVTPLLR--------SRLDRAIALRRREMGMGNDPVLVTSGGRGPDE 211
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHL 185
LAE+ LLE GV D + E +S T +N FS ++ + ++V++ +H+
Sbjct: 212 PLAEAEAMAGYLLEQGVPEDAVLREDRSRTTLENLTFSDRLMAGRVPRYRCVVVTNNFHV 271
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ L + G++ + S +A +Y ++E++ IL A+
Sbjct: 272 FRTALLARQAGVDAQVLGSP-----------TARYYWPSATIREFVAILAAH 312
>gi|258621490|ref|ZP_05716524.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258586878|gb|EEW11593.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 287
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTII 79
C ++LFS G + + T LL L+ +Y L +G I +++LGNG +
Sbjct: 47 GCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL-----PVEGTIDYVMVLGNGHVVD 101
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
IP E S + R+ E +R+ + M + G + + + + L
Sbjct: 102 DDIPPTS-ELSRAALMRLTEGIRISRMYPGSKMILSGYAGGSE-----FSHARMMARVAL 155
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV + DI L + DT++ A+ +++ + Q K ++LV+SA H+KR+ F+ G+
Sbjct: 156 ALGVPKSDIILLETAKDTWEEARQAAAFV---QQKRMVLVTSASHMKRAMREFESAGLTP 212
Query: 200 KASCSDYLN 208
+ ++YL
Sbjct: 213 IPAPTNYLG 221
>gi|229824214|ref|ZP_04450283.1| hypothetical protein GCWU000282_01518 [Catonella morbi ATCC 51271]
gi|229786568|gb|EEP22682.1| hypothetical protein GCWU000282_01518 [Catonella morbi ATCC 51271]
Length = 341
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 29/174 (16%)
Query: 69 IVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
IV+LG NGT + P + SRI + ++L++ Q T+I+SGG
Sbjct: 170 IVVLGAGLNGTEVTPLLA-----------SRIDKAIKLWRRRPQD---VTLIMSGGQGPD 215
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
++E L GV + I ++ QS +T +N FS +++ + ++ ++V++ YHL
Sbjct: 216 EVISEGEAMKAYALRQGVPQSAILVDNQSRNTHENLLFSYKLMEKGR-EDFVIVTNYYHL 274
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
RS + + G+ + + Y+SI L+E+IG L +R
Sbjct: 275 LRSLILARRLGLKCQGYGAK-TKLYFSI----------NAFLREFIGYLTLAWR 317
>gi|254506071|ref|ZP_05118215.1| integral membrane protein [Vibrio parahaemolyticus 16]
gi|219550889|gb|EED27870.1| integral membrane protein [Vibrio parahaemolyticus 16]
Length = 268
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 33/223 (14%)
Query: 28 CFMLLFSFIGWGIIP-----TILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIP 80
CF++LFSFIG +I + LL L+ Y S + D +I +++LG+G +
Sbjct: 39 CFIVLFSFIGMFLIAFQPVSSRLLMPLERQY-----SAFFPVDESIDYVMVLGSGHVVDD 93
Query: 81 TIPAIRIEPSFQSYSRIFE---TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
IP E S R+ E MR+Y K +I G ++ + +
Sbjct: 94 KIPPTS-ELSRTGLMRLAEGIRVMRIYPGSK--------LILSGYSGGSDISNARMMAKV 144
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L GV + DI L + DT++ A+ +++ +K+ K +++V+SA H+KR+ F G+
Sbjct: 145 ALALGVSKSDIILLETAKDTWEEARQAAAFVKH---KKMVVVTSASHMKRALNEFHSAGL 201
Query: 198 NTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGIL 234
+ ++YL + P + TE E +GIL
Sbjct: 202 KPYPAPTNYLAHDNVTEPWSKYTPKAVYLEQTERYWHETLGIL 244
>gi|308179164|ref|YP_003918570.1| hypothetical protein AARI_34120 [Arthrobacter arilaitensis Re117]
gi|307746627|emb|CBT77599.1| conserved hypothetical membrane protein [Arthrobacter arilaitensis
Re117]
Length = 342
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K D +V+LG T P +R R+ + + L + QHS ++ +GG
Sbjct: 161 KADSAAVVVLGARTIKGKVTPLLR--------GRLDKGIELQQ--LQHSPRPFMVPTGGQ 210
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVSS 181
E + L E G++ I +E ++ DT +N +FS+++I+ + + LV+S
Sbjct: 211 GHDEVEPEGVSMAKYLQEQGIDEAQILIEDRAKDTMENLRFSNALIREQRPDGQLWLVTS 270
Query: 182 AYHLKRSQLYFQHFGINTKA 201
YH R + + G++ +A
Sbjct: 271 DYHALRVAMASRQLGLDARA 290
>gi|119775365|ref|YP_928105.1| hypothetical protein Sama_2230 [Shewanella amazonensis SB2B]
gi|119767865|gb|ABM00436.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 245
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 102 RLYKSCKQHSM--HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL + KQ S+ CT+I+SG + A + V +E GV I + DT +
Sbjct: 105 RLTEGLKQMSLGQDCTLIVSGYRSDYNRFAHADVMKQAAMELGVPEAQIIALPLARDTLE 164
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
A+ ++ +QG + LV+SA H+ R+ F H GI A+ +D+ + L+A+
Sbjct: 165 EARQIKAL--GLQGA-LRLVTSAAHMPRAMAMFAHEGITADAAPTDFTARQSTWWRLNAD 221
Query: 220 -FYLTELALKEYIGIL 234
+ A+ EY+G L
Sbjct: 222 ALNSAQKAIHEYVGTL 237
>gi|30262287|ref|NP_844664.1| hypothetical protein BA_2278 [Bacillus anthracis str. Ames]
gi|47527579|ref|YP_018928.1| hypothetical protein GBAA_2278 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49185134|ref|YP_028386.1| hypothetical protein BAS2124 [Bacillus anthracis str. Sterne]
gi|49479213|ref|YP_036390.1| hypothetical protein BT9727_2062 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|65319584|ref|ZP_00392543.1| COG1434: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
gi|118477705|ref|YP_894856.1| hypothetical protein BALH_2039 [Bacillus thuringiensis str. Al
Hakam]
gi|167632793|ref|ZP_02391119.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|177649292|ref|ZP_02932294.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|196039956|ref|ZP_03107259.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196046918|ref|ZP_03114139.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|218903420|ref|YP_002451254.1| hypothetical protein BCAH820_2304 [Bacillus cereus AH820]
gi|225864256|ref|YP_002749634.1| hypothetical protein BCA_2360 [Bacillus cereus 03BB102]
gi|229600915|ref|YP_002866624.1| hypothetical protein BAA_2343 [Bacillus anthracis str. A0248]
gi|254684861|ref|ZP_05148721.1| hypothetical protein BantC_13530 [Bacillus anthracis str.
CNEVA-9066]
gi|254722269|ref|ZP_05184057.1| hypothetical protein BantA1_07359 [Bacillus anthracis str. A1055]
gi|254737308|ref|ZP_05195012.1| hypothetical protein BantWNA_19319 [Bacillus anthracis str. Western
North America USA6153]
gi|254743507|ref|ZP_05201192.1| hypothetical protein BantKB_21307 [Bacillus anthracis str. Kruger
B]
gi|254751624|ref|ZP_05203661.1| hypothetical protein BantV_04116 [Bacillus anthracis str. Vollum]
gi|254760143|ref|ZP_05212167.1| hypothetical protein BantA9_17676 [Bacillus anthracis str.
Australia 94]
gi|30256918|gb|AAP26150.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47502727|gb|AAT31403.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49179061|gb|AAT54437.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|49330769|gb|AAT61415.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|118416930|gb|ABK85349.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
gi|167531605|gb|EDR94270.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|172084366|gb|EDT69424.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|196022293|gb|EDX60979.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|196029215|gb|EDX67819.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|218536887|gb|ACK89285.1| conserved hypothetical protein [Bacillus cereus AH820]
gi|225786065|gb|ACO26282.1| conserved hypothetical protein [Bacillus cereus 03BB102]
gi|229265323|gb|ACQ46960.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
Length = 185
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 72 VKVIVSGGQGEDEDIPEAHSMRNYLMARGIDESRILIEDQSTNTYENVKFSMDLY---DV 128
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 129 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 160
>gi|326939983|gb|AEA15879.1| putative cytoplasmic protein [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 185
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 72 AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDLY---NV 128
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 129 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 160
>gi|307721211|ref|YP_003892351.1| hypothetical protein Saut_1291 [Sulfurimonas autotrophica DSM
16294]
gi|306979304|gb|ADN09339.1| protein of unknown function DUF218 [Sulfurimonas autotrophica DSM
16294]
Length = 248
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 7/108 (6%)
Query: 133 VYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
V N KL + G++ +D+ + + DT + A F+ +++ N ++ ILV+SA H+ R+ +
Sbjct: 140 VMNAKLANALGIKYEDMIINGKPTDTKEEALFTKTLVGN---ESFILVTSATHMPRAMML 196
Query: 192 FQHFGINTKASCSDYLNAY---YSIIPLSANFYLTELALKEYIGILIA 236
F G++ + ++Y + Y P F+++ +A+ EY+GIL A
Sbjct: 197 FTSLGMHPIPAPTNYYKSEFRGYLRAPDPGCFFISSIAIHEYLGILWA 244
>gi|167464933|ref|ZP_02330022.1| hypothetical Membrane Spanning Protein [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322382670|ref|ZP_08056534.1| hypothetical protein PL1_1385 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321153368|gb|EFX45791.1| hypothetical protein PL1_1385 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 365
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 104/237 (43%), Gaps = 30/237 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ WI +++ L+ + +F +LL+ F+ I L + + + +P
Sbjct: 125 LLVYWIISLMNPTELISDDWKILFTGVSAILLYMFMD---IANFLTASILYQFNKP---- 177
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K + + +++ G+G P + SRI + + Y + + +I SG
Sbjct: 178 --KYNQDFVIVHGSGLIHDKVPPLLA--------SRIDKAIEFYWMQSKVASPPKLIFSG 227
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIIL 178
G ++E+ +E G+ +D E QS T++N +S +++++ G+ N I
Sbjct: 228 GKGSDENVSEAEAMQIYAIEKGIPIEDTIQENQSRSTYENLLYSKRIMESINGEKYNSIF 287
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
VS+ +H+ R+ +Y + G+++ S + +Y ++EYI I +
Sbjct: 288 VSNNFHIFRAGMYARQLGLDSHCIGSK-----------TVFYYWLNAMIREYIAIFV 333
>gi|302185148|ref|ZP_07261821.1| hypothetical protein Psyrps6_02354 [Pseudomonas syringae pv.
syringae 642]
Length = 256
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 31/196 (15%)
Query: 56 PLLSPQWK---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI---FETMRLYKSCKQ 109
PL QW + + IV+LGNG R P++ + + E +RL +
Sbjct: 67 PLPQQQWATLAQQADAIVVLGNGRE--------RNSPTWGTDTPTGLGLERLRLAARLAK 118
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL-----ETQSLDTFQNAQFS 164
S I+ SGG +E+ + L +DD + E S T++NA S
Sbjct: 119 ES-GLPILTSGGLHFDQPPSEAAIMAQSL------QDDFAVTVRWQEGLSRTTWENATMS 171
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSAN 219
+++++ K ++LV+ A+H+ R++ F+ G + +L + +P S
Sbjct: 172 AAILQPQGIKRVVLVTQAWHMPRARWSFEQAGFTVVGAPVGFLGVDNARPFAGWLPESRV 231
Query: 220 FYLTELALKEYIGILI 235
F + + L E G+L+
Sbjct: 232 FTQSGMLLNEAAGLLV 247
>gi|165976456|ref|YP_001652049.1| hypothetical protein APJL_1049 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|307257077|ref|ZP_07538852.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|165876557|gb|ABY69605.1| hypothetical protein APJL_1049 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|306864448|gb|EFM96356.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 246
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 36/242 (14%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
W+F ++ YW L + + F+ L LFS P + K L+ +
Sbjct: 22 WLFSLICYWLNLKKISYSLAFLGIGSLYLFS------TPYVATKLTDSLVTEDNLALEDY 75
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI------FETMRLYKSCKQHSMHCTII 117
K IV+LG G + S + Y+ I E MR Y + Q ++
Sbjct: 76 KKAQAIVVLGGG-----------VRDSKEIYNPIVVGNQALERMR-YAAYLQKETQLPLL 123
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
I+G P +G +E+ N+ + LE ++ T +NAQFS ++ II
Sbjct: 124 ITGSSP--NGTSEAKTMANEF-QYFFSVPTQWLEEKAKTTKENAQFSRELLAKEGINKII 180
Query: 178 LVSSAYHLKRSQLYFQHFG-------INTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
LV++ +H+KR+++ F+ G I + ++Y+N Y IP S L+LKE+
Sbjct: 181 LVTNQWHMKRAKMLFEKQGFEVLPASIGHGVTPAEYINFAY-FIPQSGAMDSIMLSLKEW 239
Query: 231 IG 232
+G
Sbjct: 240 LG 241
>gi|324998494|ref|ZP_08119606.1| hypothetical protein PseP1_06982 [Pseudonocardia sp. P1]
Length = 334
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ +V+LG G P +R SR+ + L + ++ SGG
Sbjct: 160 DFVVVLGAGLIRGKVTPLLR--------SRLDRAIALRERETGTGNDPVLVTSGGRGPDE 211
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVSSAYHL 185
+AE+ LLE GV D + E +S T +N F+ ++ + + G ++V++ +H+
Sbjct: 212 PVAEAEAMAGYLLEQGVPEDAVLREDRSRTTLENLTFTDRLMADRVPGYRCVVVTNNFHV 271
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ L + G++ S +A +YL ++E++ IL ++
Sbjct: 272 FRTALLARQSGVDGHVLGSP-----------TARYYLPSATIREFVAILASH 312
>gi|170744388|ref|YP_001773043.1| hypothetical protein M446_6345 [Methylobacterium sp. 4-46]
gi|168198662|gb|ACA20609.1| protein of unknown function DUF218 [Methylobacterium sp. 4-46]
Length = 273
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 6/163 (3%)
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAESIVYNNKLLESG 142
IR E +R + + + + + ++ +GG ++ GL E+ L E G
Sbjct: 95 IRAERGAPGLNREADRLVAFAALARRYPAAKLVFAGGPASGRREGLTEAQASRALLEEIG 154
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG----IN 198
+ + ++ +S T++NA + ++ + G+ +LV+SA H+ R+ F+ G +
Sbjct: 155 LPPGRLLVDDRSRSTWENAVEARALARPGPGETWLLVTSASHMPRAMGAFRRAGWPPLLA 214
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ ++ PL A +LA E+ G+L RG
Sbjct: 215 WPVAYRTTRRGAAALRPLGAKLAAIDLAAHEWAGLLAYRLRGR 257
>gi|329118151|ref|ZP_08246863.1| protein of hypothetical function DUF218 [Neisseria bacilliformis
ATCC BAA-1200]
gi|327465811|gb|EGF12084.1| protein of hypothetical function DUF218 [Neisseria bacilliformis
ATCC BAA-1200]
Length = 222
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 26/193 (13%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFI--GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
H+L S+ + F +S ++L F+ W + T R L PQ G+ V+
Sbjct: 12 HILWGSLWRGFAISVALVLLFFVWCAWSVYRT----------GRDGL-PQ-GYTGDAAVV 59
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG P R RI + LY+S + + + +GG +K ++E
Sbjct: 60 LGAAAWDARPSPVFR--------ERINHAVGLYRSGRVRKL----VFTGGAVKKGYMSEG 107
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
V L+ GV +DI LE +S T++N + + ++ + I++VS HL R+
Sbjct: 108 EVGRRYALKQGVPAEDILLENKSRTTYENLAYLRAPLREAGLRKIVIVSDPPHLARAAAV 167
Query: 192 FQHFGINTKASCS 204
+ G++ + S +
Sbjct: 168 ARDLGLDAQVSPT 180
>gi|54025401|ref|YP_119643.1| hypothetical protein nfa34310 [Nocardia farcinica IFM 10152]
gi|54016909|dbj|BAD58279.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 315
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
++++GG+PQ +G+ E+ N L+ G+ I +E ++ T QNA FS+ +++++ +
Sbjct: 194 VVVTGGNPQ-NGITEAEAMRNWLVGRGLPAARIHVENRAGSTVQNALFSTRLLRDIGASS 252
Query: 176 IILVSSAYHLKRSQLYFQHFGI 197
++V+S H++R+ F GI
Sbjct: 253 AVVVTSPNHIRRAVADFIVAGI 274
>gi|206971658|ref|ZP_03232608.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|206733643|gb|EDZ50815.1| conserved hypothetical protein [Bacillus cereus AH1134]
Length = 185
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 71 EAKVIVSGGQGEDEDIPEAHSMRNYLMARGIDESRILIEDQSTNTYENLKFSMDLY---N 127
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 128 VKHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 160
>gi|33593317|ref|NP_880961.1| hypothetical protein BP2323 [Bordetella pertussis Tohama I]
gi|33572673|emb|CAE42596.1| conserved hypothetical membrane protein [Bordetella pertussis
Tohama I]
gi|332382726|gb|AEE67573.1| hypothetical protein BPTD_2282 [Bordetella pertussis CS]
Length = 254
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 88/213 (41%), Gaps = 16/213 (7%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ W + T L + P L P + IV+LG T A F Y
Sbjct: 48 LAWSLPATSLWLGGALESRYPHLPPDQSPTADAIVVLGGNT-------ANGRANWFLPYD 100
Query: 96 RIFETMRLYKSCK--QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
+ +R+ + + Q +++SGG + ++E+ ++ + GV + LE
Sbjct: 101 KETAVVRVDTATELFQAGRASKVVLSGGALEGD-ISEARGMAYRMRQHGVPESALILENA 159
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS------CSDYL 207
S T++NA + ++ + ++LV+SA H+ R+ F G+ A+ +
Sbjct: 160 SRTTYENAALTEDTLRQHGIQKVLLVTSALHMPRAMAAFSKQGVQAIAAPAPPQIVAPAD 219
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +P +F + +KEY G+ + + RG
Sbjct: 220 GSLSPWLPDQRSFDASRSIIKEYAGLFVYWLRG 252
>gi|302536555|ref|ZP_07288897.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302445450|gb|EFL17266.1| conserved hypothetical protein [Streptomyces sp. C]
Length = 337
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKS-CKQHSMHCTIIISGG 121
+ D + +V+LG+G I R+ P S R+ + ++Y++ + S ++ SGG
Sbjct: 155 RGDVDHVVMLGSGL-----IGGDRVPPLLAS--RLRKGQQIYEAQLARGSRPPVLLTSGG 207
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNIILVS 180
++E+ + L+ GV + +KLE S T +N FS M+ + G ++V+
Sbjct: 208 KGSDERVSEARAMADWLIAEGVPAEHVKLEENSATTEENMLFSKGIMLADKPGYRCVVVT 267
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ +H R+ + + G+N + S +A ++L L+E++ +
Sbjct: 268 NNFHAFRAAMLARKTGVNGQVLGSP-----------TARYFLPSALLREFVAV 309
>gi|165870553|ref|ZP_02215207.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167639676|ref|ZP_02397946.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170686976|ref|ZP_02878195.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170706657|ref|ZP_02897116.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|190565393|ref|ZP_03018313.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|196033843|ref|ZP_03101254.1| conserved hypothetical protein [Bacillus cereus W]
gi|227814904|ref|YP_002814913.1| hypothetical protein BAMEG_2315 [Bacillus anthracis str. CDC 684]
gi|228927349|ref|ZP_04090406.1| hypothetical protein bthur0010_20610 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228933586|ref|ZP_04096436.1| hypothetical protein bthur0009_20510 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228945900|ref|ZP_04108243.1| hypothetical protein bthur0007_20530 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229091270|ref|ZP_04222488.1| hypothetical protein bcere0021_20850 [Bacillus cereus Rock3-42]
gi|229121834|ref|ZP_04251054.1| hypothetical protein bcere0016_21340 [Bacillus cereus 95/8201]
gi|164713708|gb|EDR19231.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167512385|gb|EDR87761.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170128388|gb|EDS97256.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170669027|gb|EDT19771.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|190563420|gb|EDV17385.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|195993523|gb|EDX57480.1| conserved hypothetical protein [Bacillus cereus W]
gi|227005837|gb|ACP15580.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|228661623|gb|EEL17243.1| hypothetical protein bcere0016_21340 [Bacillus cereus 95/8201]
gi|228692036|gb|EEL45777.1| hypothetical protein bcere0021_20850 [Bacillus cereus Rock3-42]
gi|228813774|gb|EEM60052.1| hypothetical protein bthur0007_20530 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228826046|gb|EEM71829.1| hypothetical protein bthur0009_20510 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228832245|gb|EEM77825.1| hypothetical protein bthur0010_20610 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 166
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 53 VKVIVSGGQGEDEDIPEAHSMRNYLMARGIDESRILIEDQSTNTYENVKFSMDLY---DV 109
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 110 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 141
>gi|149191740|ref|ZP_01869980.1| hypothetical protein VSAK1_04082 [Vibrio shilonii AK1]
gi|148834429|gb|EDL51426.1| hypothetical protein VSAK1_04082 [Vibrio shilonii AK1]
Length = 297
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 21/175 (12%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET---MRLYKSCKQHSMHCTIIISGGDPQK 125
+++LG G + IP E S S R+ E +R+Y K +I+SG D
Sbjct: 82 VMVLGGGHVVDDQIPPTS-ELSRASLMRLSEGIRILRMYPGAK-------LILSGYD-GG 132
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
G++ + L G+ + DI L + DT++ A+ ++ ++N K ++LV+SA H+
Sbjct: 133 TGVSHARTMAKVALALGIAKPDIILLETAKDTWEEARQAAGFVQN---KKLVLVTSASHM 189
Query: 186 KRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGIL 234
KR+ F+ G+N + +++L A+ P S TE E +G++
Sbjct: 190 KRAMHEFEAAGLNPLPAPTNFLAQKDIEQAWQKYTPSSRYLEQTERYWHETMGLI 244
>gi|116052024|ref|YP_789133.1| hypothetical protein PA14_12270 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115587245|gb|ABJ13260.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
Length = 253
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIE-PSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P + + IV+LG G PA + PS + R+ RL K+ ++I
Sbjct: 74 PGLAQRADAIVILGVGRQT--NDPAWGDDAPSLLAAERLRYAARLAKTSA-----LPVLI 126
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ-----SLDTFQNAQFSSSMIKNMQG 173
SGG +E+ + N LL+ D + T+ S T++NA S+ ++
Sbjct: 127 SGGLHYGRPPSEAALMANALLQ------DFGVPTRWQEGLSRTTWENATLSAPQLREAGV 180
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALK 228
+ ++LV+ A+H++R++ F+ G + +L + +P + F+ + + L
Sbjct: 181 RRVVLVTQAWHMQRARWSFERQGFEVIPAPVGFLGGANLRPFGGWLPEAQAFWQSGMLLN 240
Query: 229 EYIGIL 234
E IG++
Sbjct: 241 EAIGLV 246
>gi|167947128|ref|ZP_02534202.1| probable transmembrane protein [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 250
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQ 153
+R E +R Y + +I SGG P G E+ + L E GV I E
Sbjct: 102 ARELERLR-YAAKLARQTGLPVIPSGGAPIYFGEPEAKIAARILQDEFGVSVSQI--EAA 158
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL------ 207
S T+ NA+ S+ ++K + K ++LV++A H++R+ F+ G+ A+ + ++
Sbjct: 159 SNTTWDNARLSAQLLKKLGIKQVLLVTNALHMRRAIYAFERNGVEVIAAPTSFIHKTNTR 218
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + +P A+ EY+G+L Y++
Sbjct: 219 HVWLEGLPNGLAVKNVAYAMHEYVGLLWYYFK 250
>gi|28211594|ref|NP_782538.1| membrane associated protein [Clostridium tetani E88]
gi|28204035|gb|AAO36475.1| membrane associated protein [Clostridium tetani E88]
Length = 192
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+GII T++L + + R + + +K II+L G ++ P+ P Q RI
Sbjct: 14 FGIILTLILGMNIYLFGR---NSKAEKSDCIIIL---GCSVYGETPS----PFLQW--RI 61
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E RLYK I+ SGG ++E+ L+ G++ + I E +S T
Sbjct: 62 EEGYRLYK----EGYGRYILASGGKGPGESISEAEAMKRYLISKGIKEEYIIKEDKSTST 117
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+N + + +++ KN ++VS+ YHLKR+ L + GI++
Sbjct: 118 MENLKNCNKIMEKKGLKNAVIVSNKYHLKRASLMTKKVGIDS 159
>gi|323524387|ref|YP_004226540.1| hypothetical protein BC1001_0013 [Burkholderia sp. CCGE1001]
gi|323381389|gb|ADX53480.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1001]
Length = 186
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
SR+ + + C + + I +SGG K G E+ + L++ G+ ++ I ++
Sbjct: 50 SRLSARLDRARQCYDNGLCHQIFVSGG-IDKQGTDEARAMEDYLVKRGIPKERIVMDNMG 108
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
LDT+ + +S+ ++ K+ ++V+ +H+ R+ L + FGIN A
Sbjct: 109 LDTWDTVRNASAYMQTHHLKSALVVTQYFHVPRAALALRRFGINHVAG 156
>gi|228914883|ref|ZP_04078488.1| hypothetical protein bthur0012_21100 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228844679|gb|EEM89725.1| hypothetical protein bthur0012_21100 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 166
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS + K+
Sbjct: 55 VIVSGGQGEDEDIPEAHSMRNYLMARGIDESRILIEDQSTNTYENVKFSMDLY---DVKH 111
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSD 205
++VS+ YHL R+++ + G+ +A ++
Sbjct: 112 AVVVSNTYHLYRTKIIAKRLGMKMEALAAE 141
>gi|326776386|ref|ZP_08235651.1| protein of unknown function DUF218 [Streptomyces cf. griseus
XylebKG-1]
gi|326656719|gb|EGE41565.1| protein of unknown function DUF218 [Streptomyces cf. griseus
XylebKG-1]
Length = 336
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 77/180 (42%), Gaps = 19/180 (10%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++ + +V+LG+G T+P + SR+ ++ + +I SGG
Sbjct: 155 RRKADFVVVLGSGLVGGSTVPPL-------LASRLKRGQAVHARLSRRGGSPVLITSGGQ 207
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSS 181
L ES + L+ G I+ E +S +T +N +FS ++++ + ++V++
Sbjct: 208 GPDEDLPESHAMADHLVAEGFPEHLIEREDRSTNTEENLRFSKAIMEKAKPDYRCVVVTN 267
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
YH R+ L + I + S +A ++ L+E+ IL+ Y R N
Sbjct: 268 NYHAFRAALTARRVRIRGQVVGSP-----------TAAYFWPNATLREFTAILVDYRRSN 316
>gi|218897246|ref|YP_002445657.1| hypothetical protein BCG9842_B3064 [Bacillus cereus G9842]
gi|228939435|ref|ZP_04102023.1| hypothetical protein bthur0008_20940 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228965253|ref|ZP_04126347.1| hypothetical protein bthur0004_20910 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228972289|ref|ZP_04132901.1| hypothetical protein bthur0003_20630 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228978903|ref|ZP_04139269.1| hypothetical protein bthur0002_21040 [Bacillus thuringiensis Bt407]
gi|218541132|gb|ACK93526.1| conserved hypothetical protein [Bacillus cereus G9842]
gi|228780777|gb|EEM28989.1| hypothetical protein bthur0002_21040 [Bacillus thuringiensis Bt407]
gi|228787434|gb|EEM35401.1| hypothetical protein bthur0003_20630 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228794487|gb|EEM41999.1| hypothetical protein bthur0004_20910 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228820135|gb|EEM66172.1| hypothetical protein bthur0008_20940 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 178
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 65 AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDLY---NV 121
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 122 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 153
>gi|292487838|ref|YP_003530713.1| hypothetical protein EAMY_1355 [Erwinia amylovora CFBP1430]
gi|292899065|ref|YP_003538434.1| membrane protein [Erwinia amylovora ATCC 49946]
gi|291198913|emb|CBJ46023.1| putative membrane protein [Erwinia amylovora ATCC 49946]
gi|291553260|emb|CBA20305.1| Uncharacterized protein ycbC [Erwinia amylovora CFBP1430]
Length = 262
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
IV+LG G T ++ PS S R+ E +R++++ Q +I +GG Q
Sbjct: 82 IVVLGGGYTW-----NLQWAPSSNMLNNSLPRLAEGIRIWRANPQ----AKLIFTGGKAQ 132
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ ++ + V + GV I + + DT Q A + ++ N + LV+SA H
Sbjct: 133 HNPMSSAAVTASVAQSLGVPAAAIIILDKPRDTEQEAHEVAKIVHN---QPFALVTSANH 189
Query: 185 LKRSQLYFQHFGIN------TKASCSDYLNAYYSIIPLSANFYL--TELALKEYIGILIA 236
L R+ +FQ+ G+ + + + LN + ++P S F+L +E AL E IG L
Sbjct: 190 LPRAIRFFQYQGLQPWPAPANQLAVASPLNVWERVLPSS--FWLGHSERALYENIGRLWQ 247
Query: 237 YYR 239
+ +
Sbjct: 248 WLK 250
>gi|325276217|ref|ZP_08142016.1| hypothetical protein G1E_22290 [Pseudomonas sp. TJI-51]
gi|324098646|gb|EGB96693.1| hypothetical protein G1E_22290 [Pseudomonas sp. TJI-51]
Length = 253
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 87/196 (44%), Gaps = 32/196 (16%)
Query: 56 PLLSPQWKK---DGNIIVLLGNGTTIIPTIPAIRIEPSF----QSYSRIFETMRLYKSCK 108
PL W + + IV+LG G R +P++ Q + E MR
Sbjct: 67 PLAVSDWARLASRADAIVVLGAGRE--------RGDPAWGGGDQPTATALERMRFAARLA 118
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ-----SLDTFQNAQF 163
+ S ++ SGG +E+ + ++L R+D +E + S T++NAQ
Sbjct: 119 KAS-GLPVLTSGGLHYGTPPSEAQLMADRL------REDFAVEVRWREEASRTTWENAQL 171
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSA 218
S+ +++ + + +++V+ A+H++RS+ F+ G + +L + ++P S
Sbjct: 172 SAKVLQPLGIRRVVVVTQAWHMQRSRWSFEQAGFEVVPAPVGFLGREHARPFGGLLPESR 231
Query: 219 NFYLTELALKEYIGIL 234
+ + L E +G++
Sbjct: 232 AMWQSGQLLNEVVGLV 247
>gi|311899501|dbj|BAJ31909.1| hypothetical protein KSE_61430 [Kitasatospora setae KM-6054]
Length = 330
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 16 LCQSIRKIFFMSCFM--LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L R +F ++C++ L F+G+ + Y R L P ++D + +V+LG
Sbjct: 121 LVTVARTVFAVACYLSFLFACFVGY-----------AYLYGR--LIP--REDVDYVVVLG 165
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + R+ P S R+ RLY+ +++SGG L E+
Sbjct: 166 AGL-----LDGSRVPPLLAS--RLDRGRRLYERQVDRGRSPLLLVSGGKGGDEQLPEADA 218
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYF 192
L+E G D I E +S T +N +FS +++ ++V++ +H R+ ++
Sbjct: 219 MAGYLVERGFPADRIVREDRSATTEENLRFSHAIMAAADPDYRCVVVTNNFHAFRAAVFA 278
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ G+ S P +A F+ + ++E++ +++ Y
Sbjct: 279 RREGVRGHVVGS----------PTAAYFWPSA-TIREFVALIVVY 312
>gi|323493229|ref|ZP_08098358.1| hypothetical protein VIBR0546_19494 [Vibrio brasiliensis LMG 20546]
gi|323312495|gb|EGA65630.1| hypothetical protein VIBR0546_19494 [Vibrio brasiliensis LMG 20546]
Length = 267
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 37/195 (18%)
Query: 28 CFMLLFSFIGWGIIP-----TILLKHLQFSYQR--PLLSPQWKKDGNIIVLLGNGTTIIP 80
CF++LFSFIG +I + LL L+ Y P+ P + +++LG+G +
Sbjct: 39 CFVVLFSFIGIFLIAFQPVSSRLLMPLERQYSAFFPVDEPI-----DYVMVLGSGHVVDD 93
Query: 81 TIPAIRIEPSFQSYSRIFE---TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
IP E S R+ E +R+Y K +I+SG A S V N +
Sbjct: 94 KIPPTS-ELSRTGLMRLSEGIRILRIYPGAK-------LILSGYA------AGSEVSNAR 139
Query: 138 LLES-----GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
++ GV + DI L + DT++ A+ +++ + K +++V+SA H+KR+ F
Sbjct: 140 MMAKVALALGVAKSDIILLETAKDTWEEARQAAAFVST---KKLVVVTSASHMKRALNEF 196
Query: 193 QHFGINTKASCSDYL 207
G+ A+ ++YL
Sbjct: 197 HSAGLKPYAAPTNYL 211
>gi|312171960|emb|CBX80217.1| Uncharacterized protein ycbC [Erwinia amylovora ATCC BAA-2158]
Length = 262
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
IV+LG G T ++ PS S R+ E +R++++ Q +I +GG Q
Sbjct: 82 IVVLGGGYTW-----NLQWAPSSNMLNNSLPRLAEGIRIWRANPQ----AKLIFTGGKAQ 132
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ ++ + V + GV I + + DT Q A + ++ N + LV+SA H
Sbjct: 133 HNPMSSAAVTASVAQSLGVPAAAIIILDKPRDTEQEAHEVAKIVHN---QPFALVTSANH 189
Query: 185 LKRSQLYFQHFGIN------TKASCSDYLNAYYSIIPLSANFYL--TELALKEYIGILIA 236
L R+ +FQ+ G+ + + + LN + ++P S F+L +E AL E IG L
Sbjct: 190 LPRAIRFFQYQGLQPWPAPANQLAVASPLNVWERVLPSS--FWLGHSERALYENIGRLWQ 247
Query: 237 YYR 239
+ +
Sbjct: 248 WLK 250
>gi|144900194|emb|CAM77058.1| Protein of unknown function DUF218 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 167
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
HS ++ G H E++V + + +G++ D I +E QS +T NA++ + +I
Sbjct: 41 HSGRVAHLLMSGGAVNHPTPEALVMRDLAMAAGIDADRIVVEDQSRNTIGNARYCAPIIV 100
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS--DYLNAYY 211
++LV+ ++HL R++L F G+ S + + +NA +
Sbjct: 101 AQGWTRLLLVTDSFHLPRARLIFARHGLKVALSGARPESVNAEW 144
>gi|182435761|ref|YP_001823480.1| hypothetical protein SGR_1968 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178464277|dbj|BAG18797.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 336
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 77/180 (42%), Gaps = 19/180 (10%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++ + +V+LG+G T+P + SR+ ++ + +I SGG
Sbjct: 155 RRKADFVVVLGSGLVGGSTVPPL-------LASRLKRGQAVHARLSRRGGSPVLITSGGQ 207
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSS 181
L ES + L+ G I+ E +S +T +N +FS ++++ + ++V++
Sbjct: 208 GPDEDLPESHAMADHLVAEGFPEHLIEREDRSTNTEENLRFSKAIMEKAKPDYRCVVVTN 267
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
YH R+ L + I + S +A ++ L+E+ IL+ Y R N
Sbjct: 268 NYHAFRAALTARRVRIRGQVVGSP-----------TAAYFWPNATLREFTAILVDYRRSN 316
>gi|222095875|ref|YP_002529932.1| cytoplasmic protein [Bacillus cereus Q1]
gi|221239933|gb|ACM12643.1| hypothetical Cytosolic Protein [Bacillus cereus Q1]
Length = 185
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS I
Sbjct: 72 VKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENVKFS---IDLYDV 128
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
K+ ++VS+ YHL R+++ + G+ +A ++ P+ + ++ ++EY+ I
Sbjct: 129 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE--------TPIRSK---RKMYVREYVAI 177
Query: 234 L 234
+
Sbjct: 178 M 178
>gi|239944530|ref|ZP_04696467.1| hypothetical protein SrosN15_26272 [Streptomyces roseosporus NRRL
15998]
gi|239990990|ref|ZP_04711654.1| hypothetical protein SrosN1_27034 [Streptomyces roseosporus NRRL
11379]
gi|291447993|ref|ZP_06587383.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291350940|gb|EFE77844.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 336
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 77/180 (42%), Gaps = 19/180 (10%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++ + +V+LG+G T+P + SR+ ++ + +I SGG
Sbjct: 155 RRKADFVVVLGSGLVGGSTVPPL-------LASRLKRGQAVHARLARRGGSPVLITSGGQ 207
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSS 181
L ES + L+ G I+ E +S +T +N +FS ++++ + ++V++
Sbjct: 208 GPDEDLPESHAMADHLVAQGFPAHLIEREDRSTNTEENLRFSKAIMEKAKPDYRCVVVTN 267
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
YH R+ L + I + S +A ++ L+E+ IL+ Y R N
Sbjct: 268 NYHAFRAALTARRVRIRGQVVGSP-----------TAAYFWPNATLREFAAILVDYRRSN 316
>gi|220935848|ref|YP_002514747.1| hypothetical protein Tgr7_2685 [Thioalkalivibrio sp. HL-EbGR7]
gi|219997158|gb|ACL73760.1| conserved protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 251
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 25/212 (11%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
F GW LL L+ Y P+ P + G I+VL G P + P S
Sbjct: 49 FAGW------LLAGLERGY--PVAPPLPEAAGAIVVLAGGRHPDAPEYGGETVSP--HSL 98
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ RL++ +++SGG + A +LE + ET+S
Sbjct: 99 ERLRYGARLHRDTG-----LPLLVSGGRVRGDEPAAEADLLADVLEGELGVAVRWRETES 153
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH-------FGINTKASCSDYL 207
+T +NA FS+ ++ ++ +LVS A H+ R+ FQ F S +
Sbjct: 154 RNTCENALFSAHLLAEAGIEHALLVSHALHMPRAVWCFQRTELAVTPFPTLPMGDLSRH- 212
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++P +LT AL EY+G++ +YR
Sbjct: 213 RGITVVLPQPRALWLTGQALHEYLGLV--WYR 242
>gi|33596348|ref|NP_883991.1| hypothetical protein BPP1716 [Bordetella parapertussis 12822]
gi|33602366|ref|NP_889926.1| hypothetical protein BB3392 [Bordetella bronchiseptica RB50]
gi|33566117|emb|CAE37017.1| conserved hypothetical membrane protein [Bordetella parapertussis]
gi|33576805|emb|CAE33884.1| conserved hypothetical membrane protein [Bordetella bronchiseptica
RB50]
Length = 254
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 88/213 (41%), Gaps = 16/213 (7%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ W + T L + P L P + IV+LG T A F Y
Sbjct: 48 LAWSLPATSLWLGGALESRYPHLPPDQSPTADAIVVLGGNT-------ANGRANWFLPYD 100
Query: 96 RIFETMRLYKSCK--QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
+ +R+ + + Q +++SGG + ++E+ ++ + GV + LE
Sbjct: 101 KETAVVRVDTATELFQAGRAPKVVLSGGALEGD-ISEARGMAYRMRQHGVPESALILENA 159
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS------CSDYL 207
S T++NA + ++ + ++LV+SA H+ R+ F G+ A+ +
Sbjct: 160 SRTTYENAALTEDTLRQHGIQKVLLVTSALHMPRAMAAFSKQGVQAIAAPAPPQIVAPAD 219
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +P +F + +KEY G+ + + RG
Sbjct: 220 GSLSPWLPDQRSFDASRSIIKEYAGLFVYWLRG 252
>gi|228985374|ref|ZP_04145533.1| hypothetical protein bthur0001_20700 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228774327|gb|EEM22734.1| hypothetical protein bthur0001_20700 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 201
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS I
Sbjct: 88 AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENVKFS---IDLYDV 144
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
K+ ++VS+ YHL R+++ + G+ +A ++ P+ + ++ ++EY+ I
Sbjct: 145 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE--------TPIRSK---RKMYVREYVAI 193
Query: 234 L 234
+
Sbjct: 194 M 194
>gi|184155411|ref|YP_001843751.1| hypothetical protein LAF_0935 [Lactobacillus fermentum IFO 3956]
gi|183226755|dbj|BAG27271.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
gi|299783224|gb|ADJ41222.1| Putative uncharacterized protein [Lactobacillus fermentum CECT
5716]
Length = 308
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ + LY+ + + I+SGG E++ + + GV I+LET S
Sbjct: 166 RLLGGLALYQRFPKAEL----IMSGGQGDDEPEPEAVAMHRFARQKGVPESAIRLETNST 221
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+T N + I + G ++LV+S YHL RS LY + G+N +
Sbjct: 222 NTATNLSEAKRFINS--GDRVVLVTSDYHLLRSLLYARRQGVNCQG 265
>gi|315444167|ref|YP_004077046.1| hypothetical protein Mspyr1_25770 [Mycobacterium sp. Spyr1]
gi|315262470|gb|ADT99211.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length = 185
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II++GG+P ++G E+ L G R+ I LE ++ T QNA FS + +
Sbjct: 70 QAPIIVTGGNP-RNGNTEAEQMGKMLRLYGTPRERIILEERANSTVQNAAFSVPLAEQAG 128
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
IILV+S+ H R+ F G N A+ S
Sbjct: 129 ASGIILVTSSSHQDRADGIFADAGGNVLATVS 160
>gi|114319324|ref|YP_741007.1| hypothetical protein Mlg_0162 [Alkalilimnicola ehrlichii MLHE-1]
gi|114225718|gb|ABI55517.1| protein of unknown function DUF218 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 247
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 27/198 (13%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
P + P +D IV+LG G + E S ++ + + Y +
Sbjct: 64 PPVQPAQLRDAQAIVVLGAGYR------SGADEFSGETVNDLALVRLRYAAYLHRETGLP 117
Query: 116 IIISGG-----DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+I SGG +P+ +AE L E GV D I E+++ DT+ NAQ ++ ++
Sbjct: 118 VIASGGAATDREPEARWMAEV------LAEFGV--DPILTESEARDTWGNAQHTAELLAR 169
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS------DYLNAYYSIIPLSANFYLTE 224
+ LVS A+H+ R+ F+ G+ + + D ++ + P + ++
Sbjct: 170 QGLSRVALVSHAHHMPRAVWAFEQAGVTVLPAPTGAFVPHDRGWSWGMLRPQANALRMSW 229
Query: 225 LALKEYIGILIAYYRGNR 242
LA+ EY+G+ +YR R
Sbjct: 230 LAMHEYLGLF--WYRWMR 245
>gi|323137866|ref|ZP_08072941.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
gi|322396869|gb|EFX99395.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
Length = 263
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Query: 106 SCKQHSMHCTIIISGGDPQKHG--LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
+ K+ + I+ +GG G E+ + G++ DI E +S +TF+NA F
Sbjct: 114 ALKRRYPNARIVFTGGTAALRGSPFTEAEGVKRFWRDVGLDAGDILYEDRSRNTFENAIF 173
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-LNAYYS-IIPLSA--N 219
+ +++ G+ +LV+SA H+ RS F+ A DY N +S I+P A
Sbjct: 174 TRELVQPKPGERWLLVTSAMHMPRSIGIFRKANFPVIAYPVDYRTNGKFSFILPRFAVKA 233
Query: 220 FYLTELALKEYIGILIAY 237
+ E A E++G L+AY
Sbjct: 234 IGVVEFAAHEWMG-LVAY 250
>gi|260662077|ref|ZP_05862973.1| conserved hypothetical protein [Lactobacillus fermentum 28-3-CHN]
gi|260553460|gb|EEX26352.1| conserved hypothetical protein [Lactobacillus fermentum 28-3-CHN]
Length = 308
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ + LY+ + + I+SGG E++ + + GV I+LET S
Sbjct: 166 RLLGGLALYQCFPKAEL----IMSGGQGDDEPEPEAVAMHRFARQKGVPESAIRLETNST 221
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+T N + I + G ++LV+S YHL RS LY + G+N +
Sbjct: 222 NTATNLSEAKRFINS--GDRVVLVTSDYHLLRSLLYARRQGVNCQG 265
>gi|190149832|ref|YP_001968357.1| hypothetical protein APP7_0563 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307249724|ref|ZP_07531703.1| hypothetical protein appser4_5270 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307263153|ref|ZP_07544774.1| hypothetical protein appser13_5750 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189914963|gb|ACE61215.1| hypothetical protein APP7_0563 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306858232|gb|EFM90309.1| hypothetical protein appser4_5270 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306871515|gb|EFN03238.1| hypothetical protein appser13_5750 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 252
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI------FETMRLYKSCKQHSMHCTII 117
K IV+LG G + S + + R E MR Y + I+
Sbjct: 80 KKAQAIVVLGGG-----------VRNSHELFGRYAIAAAPLERMR-YAAYLHKQTGLPIL 127
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
++GG P+ I+ L +E+ S T QNA S +M+K II
Sbjct: 128 VTGGSPEGREPEAKIIAQE--LHDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDRII 185
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY----YSIIPLSANFYLTELALKEYIG 232
LV++ +H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 186 LVTNQWHMKRAKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIG 244
>gi|114765476|ref|ZP_01444586.1| hypothetical protein 1100011001321_R2601_10319 [Pelagibaca
bermudensis HTCC2601]
gi|114542186|gb|EAU45217.1| hypothetical protein R2601_10319 [Roseovarius sp. HTCC2601]
Length = 156
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
EPS R + L++S + I+ G H +E+ V E+GV +
Sbjct: 14 EPSPTLRRRAKRAVALWQSGE-----VGAILGCGGEGAHAPSEAEVICRLAREAGVPEEA 68
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
+ E +S T +N +F+ +++ M ++++VS AYHL R+ L + G+ + +
Sbjct: 69 LFREDRSTTTEENLRFALPVLEEMGAHDVVIVSEAYHLPRALLVARRLGLRARGAAPGLG 128
Query: 208 NA 209
A
Sbjct: 129 GA 130
>gi|238916610|ref|YP_002930127.1| hypothetical protein EUBELI_00667 [Eubacterium eligens ATCC 27750]
gi|238871970|gb|ACR71680.1| Hypothetical protein EUBELI_00667 [Eubacterium eligens ATCC 27750]
Length = 258
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
TII+SGG + E+ N L+ G++ I E S DT +N ++S I+N
Sbjct: 142 TIIVSGGRGKGENTTEAFAMYNYLVSKGIDGSRIIQEDNSTDTSENMKYSVQYIENTDSL 201
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYL-TELALKEYIGI 233
+ +V++ +H+ RS+L +H G+N +C +P ++ L ++E IGI
Sbjct: 202 -VGIVTNNFHIARSRLLARHAGLNN--TCG---------MPAESDHVLFINYMVREAIGI 249
Query: 234 LIAYYRGN 241
+ + GN
Sbjct: 250 VKDFVFGN 257
>gi|145223836|ref|YP_001134514.1| hypothetical protein Mflv_3249 [Mycobacterium gilvum PYR-GCK]
gi|145216322|gb|ABP45726.1| protein of unknown function DUF218 [Mycobacterium gilvum PYR-GCK]
Length = 202
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II++GG+P ++G E+ L G R+ I LE ++ T QNA FS + +
Sbjct: 87 QAPIIVTGGNP-RNGNTEAEQMGKMLRLYGTPRERIILEERANSTVQNAAFSVPLAEQAG 145
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
IILV+S+ H R+ F G N A+ S
Sbjct: 146 ASGIILVTSSSHQDRADGIFADAGGNVLATVS 177
>gi|270291245|ref|ZP_06197467.1| hypothetical protein HMPREF9024_01427 [Pediococcus acidilactici
7_4]
gi|270280091|gb|EFA25927.1| hypothetical protein HMPREF9024_01427 [Pediococcus acidilactici
7_4]
Length = 342
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN- 175
I+SGG ++E+ L V D I LE QS T QN +FS I+ K+
Sbjct: 204 IVSGGQGPDEPVSEAYAMAKYLKSQHVPEDKIILEDQSTTTLQNMKFSKQKIEKDWKKSG 263
Query: 176 ---IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+I ++ YH+ RS +Y + G+N S ++ ++L ++EYI
Sbjct: 264 VPKVIFATNNYHVLRSAIYARKAGLNANGVGSP-----------TSFYFLPSALIREYIA 312
Query: 233 ILIAYYR 239
+L+ Y +
Sbjct: 313 LLVIYKK 319
>gi|219855730|ref|YP_002472852.1| hypothetical protein CKR_2387 [Clostridium kluyveri NBRC 12016]
gi|219569454|dbj|BAH07438.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 199
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II+SGG ++E+ N L+ G++ + +E +S+ T +N S +++ K
Sbjct: 79 IIVSGGKGPGENISEAKAMKNYLVYKGIDSSRVIMEDKSMSTMENLSNSKRVMEEKGLKT 138
Query: 176 IILVSSAYHLKRSQLYFQHFGIN 198
++VS+ YHLKR+ L + GI
Sbjct: 139 AVIVSNKYHLKRASLMAESHGIE 161
>gi|229190360|ref|ZP_04317361.1| hypothetical protein bcere0002_20280 [Bacillus cereus ATCC 10876]
gi|228593144|gb|EEK50962.1| hypothetical protein bcere0002_20280 [Bacillus cereus ATCC 10876]
Length = 185
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
II+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 72 AKIIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDLY---NV 128
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 129 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 160
>gi|206973669|ref|ZP_03234587.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217959789|ref|YP_002338341.1| hypothetical protein BCAH187_A2388 [Bacillus cereus AH187]
gi|206747825|gb|EDZ59214.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217068109|gb|ACJ82359.1| conserved hypothetical protein [Bacillus cereus AH187]
Length = 185
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS I
Sbjct: 72 VKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDERRILIEDQSTNTYENVKFS---IDLYDV 128
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
K+ ++VS+ YHL R+++ + G+ +A ++ P+ + ++ ++EY+ I
Sbjct: 129 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE--------TPIRSK---RKMYVREYVAI 177
Query: 234 L 234
+
Sbjct: 178 M 178
>gi|228900868|ref|ZP_04065083.1| hypothetical protein bthur0014_20700 [Bacillus thuringiensis IBL
4222]
gi|228858794|gb|EEN03239.1| hypothetical protein bthur0014_20700 [Bacillus thuringiensis IBL
4222]
Length = 166
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + ++E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 53 AKVIVSGGQGEDEDISEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDLY---NV 109
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 110 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 141
>gi|153955310|ref|YP_001396075.1| hypothetical protein CKL_2692 [Clostridium kluyveri DSM 555]
gi|146348168|gb|EDK34704.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
Length = 196
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II+SGG ++E+ N L+ G++ + +E +S+ T +N S +++ K
Sbjct: 76 IIVSGGKGPGENISEAKAMKNYLVYKGIDSSRVIMEDKSMSTMENLSNSKRVMEEKGLKT 135
Query: 176 IILVSSAYHLKRSQLYFQHFGIN 198
++VS+ YHLKR+ L + GI
Sbjct: 136 AVIVSNKYHLKRASLMAESHGIE 158
>gi|229155866|ref|ZP_04283967.1| hypothetical protein bcere0010_20560 [Bacillus cereus ATCC 4342]
gi|228627473|gb|EEK84199.1| hypothetical protein bcere0010_20560 [Bacillus cereus ATCC 4342]
Length = 166
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS I
Sbjct: 53 AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENVKFS---IDLYDV 109
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
K+ ++VS+ YHL R+++ + G+ +A ++ P+ + ++ ++EY+ I
Sbjct: 110 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE--------TPIRSK---RKMYVREYVAI 158
Query: 234 L 234
+
Sbjct: 159 M 159
>gi|254504841|ref|ZP_05116992.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222440912|gb|EEE47591.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 268
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 27/248 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ LIVS L + R+ ++ L+ G+ +L++ L+ + RP +
Sbjct: 25 VGLIVSMGTRLQKWGRRFIWVGALGLVIC--GFSPAANLLIQPLEDRFSRPAELGSF--- 79
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQ-SYSRIFETMRLYKSCKQ----HSMHCTIIISG 120
N +++LG + T R E + S R+ RL K + H+ II+G
Sbjct: 80 -NGVIILGGAVDTVVT--GARGETALTVSGERLTIAARLAKQLPEALIIHTGGQGTIITG 136
Query: 121 GDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
+ G ++L + G+ I LE +S +T++NA + ++ G+ +LV
Sbjct: 137 QATESEG-------ASRLFDDFGIASQRIILEDESRNTWENAVLTKELVDPKPGQTWLLV 189
Query: 180 SSAYHLKRSQLYFQHFG-INTKASCSDYLNAYYSIIPL-----SANFYLTELALKEYIGI 233
+SAYH+ RS F+ G A DY + L S ++ ++E+IG+
Sbjct: 190 TSAYHMPRSMGVFEAAGWTGVTAYPVDYRTRGGADWGLGFDGASKGLRRLDIGVREWIGL 249
Query: 234 LIAYYRGN 241
+ + G
Sbjct: 250 TVYWMTGR 257
>gi|322807220|emb|CBZ04794.1| hypothetical protein H04402_02990 [Clostridium botulinum H04402
065]
Length = 197
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II+SG ++E+ L++ G+++ I LE +S +T +N +FS +++ +
Sbjct: 81 IIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLENIKFSKKKMEDNNLSS 140
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCS 204
I+VS+ YHLKR++L Q GI KAS S
Sbjct: 141 SIIVSNKYHLKRAELLCQKEGI--KASYS 167
>gi|304384982|ref|ZP_07367328.1| conserved hypothetical protein [Pediococcus acidilactici DSM 20284]
gi|304329176|gb|EFL96396.1| conserved hypothetical protein [Pediococcus acidilactici DSM 20284]
Length = 338
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN- 175
I+SGG ++E+ L V D I LE QS T QN +FS I+ K+
Sbjct: 204 IVSGGQGPDEPVSEAYAMAKYLKSQHVPEDKIILEDQSTTTLQNMKFSKQKIEKDWKKSG 263
Query: 176 ---IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+I ++ YH+ RS +Y + G+N S ++ ++L ++EYI
Sbjct: 264 VPKVIFATNNYHVLRSAIYARKAGLNANGVGSP-----------TSFYFLPSALIREYIA 312
Query: 233 ILIAYYR 239
+L+ Y +
Sbjct: 313 LLVIYKK 319
>gi|117921230|ref|YP_870422.1| hypothetical protein Shewana3_2789 [Shewanella sp. ANA-3]
gi|117613562|gb|ABK49016.1| protein of unknown function DUF218 [Shewanella sp. ANA-3]
Length = 244
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 15/171 (8%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG--GDPQK 125
++++LG+ + IP A++ S + +R+ E +R K + CT+++SG G+ +
Sbjct: 78 VVMVLGSAHSDIPGATAVQ-SLSTVALARLTEGLRQLKLGQD----CTLVVSGWEGELTQ 132
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
H AE V +E GV+ I DT + A + ++ + + LV+SA H+
Sbjct: 133 HPHAE--VMAKAAVELGVDATRIVQLPLPRDTIEEAHY---FKEHFGDQAVRLVTSASHM 187
Query: 186 KRSQLYFQHFGINTKASCSDY--LNAYYSIIPLSANFYLTELALKEYIGIL 234
RS F G+ A+ +D+ + +Y + + N ++ A+ EYIG L
Sbjct: 188 PRSMAIFSGQGLTASAAPTDFRARDGFYWRL-TADNLLASQRAIHEYIGRL 237
>gi|114776481|ref|ZP_01451526.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1]
gi|114553311|gb|EAU55709.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1]
Length = 257
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 15/186 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q K D + IV+LG G + P P + S + T LY + + + +G
Sbjct: 76 QMKADDSAIVVLGGG--LYPRAPEYGGQDSLHD-DGLMRT--LYAADLALKSNLDVYATG 130
Query: 121 GDPQKHGLAE--SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G K G AE ++ L+ GV+ + I E ++ T++N + M+K IIL
Sbjct: 131 G-AFKPGQAEPEGLIMARMLIRFGVDPEHIHSENRARTTWENGLYIRDMMKKAGIHRIIL 189
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDY---LNAY--YSIIPLSANFYLTELALKEYIGI 233
V++A+H+ RS F+ G++ A+ Y AY S +P + L EY+G+
Sbjct: 190 VTTAWHMPRSVRVFESLGMHVIAAPCSYRAGRQAYDLRSYLPRWNVLSDSGDGLHEYLGL 249
Query: 234 LIAYYR 239
L +YR
Sbjct: 250 L--WYR 253
>gi|307245325|ref|ZP_07527413.1| hypothetical protein appser1_5300 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254278|ref|ZP_07536118.1| hypothetical protein appser9_5280 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258738|ref|ZP_07540470.1| hypothetical protein appser11_5360 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853666|gb|EFM85883.1| hypothetical protein appser1_5300 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862757|gb|EFM94711.1| hypothetical protein appser9_5280 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867089|gb|EFM98945.1| hypothetical protein appser11_5360 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 252
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI------FETMRLYKSCKQHSMHCTII 117
K IV+LG G + S + + R E MR Y + I+
Sbjct: 80 KKAQAIVVLGGG-----------VRNSHELFGRYTIAAAPLERMR-YAAYLHKQTGLPIL 127
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
++GG P+ I+ L +E+ S T QNA S +M+K II
Sbjct: 128 VTGGSPEGREPEAKIMAQE--LHDFFNVSVKWVESASNTTEQNAILSKAMLKQESIDRII 185
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY----YSIIPLSANFYLTELALKEYIG 232
LV++ +H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 186 LVTNQWHMKRTKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIG 244
>gi|223933030|ref|ZP_03625024.1| protein of unknown function DUF218 [Streptococcus suis 89/1591]
gi|302023799|ref|ZP_07249010.1| membrane protein [Streptococcus suis 05HAS68]
gi|330832826|ref|YP_004401651.1| hypothetical protein SSUST3_1032 [Streptococcus suis ST3]
gi|223898347|gb|EEF64714.1| protein of unknown function DUF218 [Streptococcus suis 89/1591]
gi|329307049|gb|AEB81465.1| protein of unknown function DUF218 [Streptococcus suis ST3]
Length = 336
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
SRI + + +Y Q +I+SGG +AE N LE G+ +DI +E QS
Sbjct: 186 SRIDKGIAIY----QKQPGSKLIMSGGQGPDELIAEGQAMANYALEQGIPAEDIIIENQS 241
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS-----QLYFQHFGINTKASCSDYLNA 209
+T +N +FS +++K G LV++ YH+ R+ QL + G K LNA
Sbjct: 242 TNTEENLKFSYALMK--PGSRFALVTNYYHVFRALLLARQLKIKCIGYGAKTKFYFSLNA 299
Query: 210 Y 210
+
Sbjct: 300 F 300
>gi|191639632|ref|YP_001988798.1| hypothetical protein LCABL_28900 [Lactobacillus casei BL23]
gi|190713934|emb|CAQ67940.1| Putative exported protein [Lactobacillus casei BL23]
gi|327383745|gb|AEA55221.1| hypothetical protein LC2W_2892 [Lactobacillus casei LC2W]
Length = 377
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
P +++P+ + I K+ K++ I+++GG P+ + L E+ V L+ G
Sbjct: 213 PNGKMQPTMKKRLEI-----ALKAAKKYP-KSKILVAGGVPE-NKLTEATVMQKWLVAHG 265
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ + I+LE S +T +NA FS + N + + L++SA H++R+ L +Q G
Sbjct: 266 IAKKRIELEDLSTNTVENALFSVRELVNREATSATLITSATHMRRAFLLYQMAG 319
>gi|218233505|ref|YP_002366978.1| hypothetical protein BCB4264_A2261 [Bacillus cereus B4264]
gi|218161462|gb|ACK61454.1| conserved hypothetical protein [Bacillus cereus B4264]
Length = 185
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 72 AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDLY---NV 128
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 129 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 160
>gi|225024219|ref|ZP_03713411.1| hypothetical protein EIKCOROL_01091 [Eikenella corrodens ATCC
23834]
gi|224943244|gb|EEG24453.1| hypothetical protein EIKCOROL_01091 [Eikenella corrodens ATCC
23834]
Length = 221
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS RI + LY++ + + I +GG P+ + E+ V GV DI
Sbjct: 62 PSPVFRERINHGITLYRNNRVGKL----IFTGGTPKAGYMTEAEVARRYARGHGVPNKDI 117
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
LET S DT QN + + +++ N ++++++S YHL R+ + G++
Sbjct: 118 LLETTSRDTQQNLENTKALMYNNGLESVVIISDPYHLARAAAVADYVGLD 167
>gi|120403947|ref|YP_953776.1| hypothetical protein Mvan_2964 [Mycobacterium vanbaalenii PYR-1]
gi|119956765|gb|ABM13770.1| protein of unknown function DUF218 [Mycobacterium vanbaalenii
PYR-1]
Length = 233
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II++GG+P ++G E+ N L G+ + I +E ++ T QNA FS + K
Sbjct: 118 QSPIIVTGGNP-RNGKTEARQMRNMLRLYGIPDERIIVEDRANSTVQNAAFSVPLAKQAG 176
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
IILV+S+ H R+ F G N A+ S
Sbjct: 177 TTGIILVTSSSHQDRADGNFADAGGNVLATVS 208
>gi|165975946|ref|YP_001651539.1| hypothetical protein APJL_0514 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|303250279|ref|ZP_07336479.1| hypothetical protein APP6_1694 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252044|ref|ZP_07533944.1| hypothetical protein appser6_5630 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|165876047|gb|ABY69095.1| hypothetical protein APJL_0514 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|302650895|gb|EFL81051.1| hypothetical protein APP6_1694 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860513|gb|EFM92526.1| hypothetical protein appser6_5630 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 252
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI------FETMRLYKSCKQHSMHCTII 117
K IV+LG G + S + + R E MR Y + I+
Sbjct: 80 KKAQAIVVLGGG-----------VRNSHELFGRYTIAAAPLERMR-YAAYLHKQTGLPIL 127
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
++GG P+ I+ L +E+ S T QNA S +M+K II
Sbjct: 128 VTGGSPEGREPEAKIMAQE--LHDFFNVSVKWVESASNTTEQNAILSKAMLKQESIDRII 185
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY----YSIIPLSANFYLTELALKEYIG 232
LV++ +H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 186 LVTNQWHMKRTKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIG 244
>gi|329768261|ref|ZP_08259762.1| hypothetical protein HMPREF0428_01459 [Gemella haemolysans M341]
gi|328837460|gb|EGF87089.1| hypothetical protein HMPREF0428_01459 [Gemella haemolysans M341]
Length = 340
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 14/120 (11%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+V+LG G + R+ P S RI + +++YKS + I+SGG +
Sbjct: 171 VVVLGAG------LIGERVTPLLAS--RIRKGIKVYKSNPGSKL----IMSGGQGPDEVV 218
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+E+ N LE GV+ DI LE +S T QN FS I K+ +V++ YH+ R+
Sbjct: 219 SEAFAMKNYALEQGVDEKDIILEDKSTSTEQNIIFSKKFIP--ADKSFAVVTNYYHVYRA 276
>gi|298291473|ref|YP_003693412.1| hypothetical protein Snov_1483 [Starkeya novella DSM 506]
gi|296927984|gb|ADH88793.1| protein of unknown function DUF218 [Starkeya novella DSM 506]
Length = 274
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 16/186 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP- 123
DG I++ G + I A R + SFQ E M + I+ +GG
Sbjct: 79 DGVIVL----GGAELAGITAARGQSSFQEAG---ERMLAMGELARRYPGARIVFAGGSSN 131
Query: 124 --QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ + E+ V L + GV+ ++ E S +T +NA+ + ++K + +LV+S
Sbjct: 132 LVEASPMQEADVVRLALPQIGVDPARVEFERYSRNTAENARLARELVKPQPDQRWLLVTS 191
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSII-----PLSANFYLTELALKEYIGILIA 236
A+H+ R+ F+ G DY + ++ +LA +E++G L+A
Sbjct: 192 AFHMPRAIGCFRAAGFPVIPYPVDYRTIGRPELFRLFGTVADGLSFVDLATREWMG-LVA 250
Query: 237 YYRGNR 242
YY R
Sbjct: 251 YYLAGR 256
>gi|324326310|gb|ADY21570.1| putative cytoplasmic protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 185
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS I
Sbjct: 72 VKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENVKFS---IDLYDV 128
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 129 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 160
>gi|167757031|ref|ZP_02429158.1| hypothetical protein CLORAM_02580 [Clostridium ramosum DSM 1402]
gi|237735899|ref|ZP_04566380.1| membrane associated protein [Mollicutes bacterium D7]
gi|167703206|gb|EDS17785.1| hypothetical protein CLORAM_02580 [Clostridium ramosum DSM 1402]
gi|229381644|gb|EEO31735.1| membrane associated protein [Coprobacillus sp. D7]
Length = 190
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 18/164 (10%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA-IRIEPSFQSY 94
IG+GI+ LL L +++P ++KK II PA I EPS
Sbjct: 7 IGFGILN--LLAFL-LVFKKPYKKQRYKK---------YDCAIICGYPANIDGEPSTIMK 54
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
SR+ + LYK K +I+SGG K+ E+ + + + GV+++DI +E QS
Sbjct: 55 SRVEMGVTLYKKDKIK----FLILSGG-AVKNEYQEAKIMASYAISLGVKKEDILIEGQS 109
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
T+ N +S +++ KN ++V++++HL+++ Y + F ++
Sbjct: 110 RSTYHNLMYSRDIMQINGLKNALVVTNSWHLRKADHYARKFKLD 153
>gi|158424456|ref|YP_001525748.1| hypothetical protein AZC_2832 [Azorhizobium caulinodans ORS 571]
gi|158331345|dbj|BAF88830.1| uncharacterized conserved protein [Azorhizobium caulinodans ORS
571]
Length = 271
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 87/195 (44%), Gaps = 20/195 (10%)
Query: 60 PQWKKDG---NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P + DG + I++LG +P + + + + E + + + + +
Sbjct: 72 PPFVGDGRPVDGIIMLGGAE-----VPEVSVVRGVTALNDAAERVLAFAALARRYPQAKL 126
Query: 117 IISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+ SGG + + A + G++ + E +S +T QNA + +I + G+
Sbjct: 127 VFSGGSGEYDESMPAAQDAVRLAFADVGLDVTRVIYERRSRNTAQNAVETRKLITPVPGE 186
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDY-------LNAYYSIIPLSANFYLTELAL 227
+LV+SA+H+ R+ F+ G A DY LN + + ++ +T++A+
Sbjct: 187 RWLLVTSAFHMPRAIGCFREVGFPVTAYPVDYRTLGPGRLNGVFRRV--ASGLDITDIAV 244
Query: 228 KEYIGILIAYYRGNR 242
+E++G L AYY R
Sbjct: 245 REWMG-LGAYYASGR 258
>gi|228952619|ref|ZP_04114695.1| hypothetical protein bthur0006_20170 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229069806|ref|ZP_04203089.1| hypothetical protein bcere0025_20080 [Bacillus cereus F65185]
gi|229150501|ref|ZP_04278717.1| hypothetical protein bcere0011_20520 [Bacillus cereus m1550]
gi|228632994|gb|EEK89607.1| hypothetical protein bcere0011_20520 [Bacillus cereus m1550]
gi|228713341|gb|EEL65233.1| hypothetical protein bcere0025_20080 [Bacillus cereus F65185]
gi|228807085|gb|EEM53628.1| hypothetical protein bthur0006_20170 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 185
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 72 AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDLY---NV 128
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 129 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 160
>gi|30020365|ref|NP_831996.1| putative cytoplasmic protein [Bacillus cereus ATCC 14579]
gi|229109718|ref|ZP_04239304.1| hypothetical protein bcere0018_19790 [Bacillus cereus Rock1-15]
gi|229127675|ref|ZP_04256664.1| hypothetical protein bcere0015_21240 [Bacillus cereus BDRD-Cer4]
gi|229144871|ref|ZP_04273268.1| hypothetical protein bcere0012_20310 [Bacillus cereus BDRD-ST24]
gi|296502841|ref|YP_003664541.1| hypothetical protein BMB171_C2008 [Bacillus thuringiensis BMB171]
gi|29895916|gb|AAP09197.1| hypothetical Cytosolic Protein [Bacillus cereus ATCC 14579]
gi|228638593|gb|EEK95026.1| hypothetical protein bcere0012_20310 [Bacillus cereus BDRD-ST24]
gi|228655752|gb|EEL11601.1| hypothetical protein bcere0015_21240 [Bacillus cereus BDRD-Cer4]
gi|228673759|gb|EEL29017.1| hypothetical protein bcere0018_19790 [Bacillus cereus Rock1-15]
gi|296323893|gb|ADH06821.1| putative cytoplasmic protein [Bacillus thuringiensis BMB171]
Length = 185
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 72 AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDLY---NV 128
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 129 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 160
>gi|313617350|gb|EFR89766.1| conserved hypothetical protein [Listeria innocua FSL S4-378]
Length = 189
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I F F++L I G I +++ FS R + ++ N +++LG P
Sbjct: 2 IRFKKFFVIL---IVIGFIYVLIVAAFMFSGTRA----KPDENVNTVLILGAKINGDPAT 54
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
P++ +E + + Y K +I+SGG E+ V L+ G
Sbjct: 55 PSLVLEERLDT---AVAYLNEYPKAK-------VIVSGGQGADESTTEAAVMEEYLVNEG 104
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ R+ IK ET+S T +N ++S+ K GK +I V+S YH+ R+ + + GIN
Sbjct: 105 IARNRIKKETKSKRTEENIKYSNE--KFDLGKTVI-VTSDYHMYRALMLAKRQGIN 157
>gi|229074933|ref|ZP_04207940.1| hypothetical protein bcere0024_19940 [Bacillus cereus Rock4-18]
gi|228708161|gb|EEL60327.1| hypothetical protein bcere0024_19940 [Bacillus cereus Rock4-18]
Length = 166
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E +S +T++N +FS +
Sbjct: 53 VKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILMEDRSTNTYENLKFSMDLF---DV 109
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + GI +A ++
Sbjct: 110 KHAVVVSNTYHLYRTKIIARRLGIKMEALAAE 141
>gi|86355763|ref|YP_467655.1| hypothetical protein RHE_CH00103 [Rhizobium etli CFN 42]
gi|86279865|gb|ABC88928.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 262
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 104/265 (39%), Gaps = 38/265 (14%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIP--------------------TIL 45
+FLI + CQ + F + F L+ + W + +L
Sbjct: 1 MFLISKLVWIFCQPLSLAFLLVFFTLIAILLRWRALSILGATASALILFVTLYTTAGNLL 60
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS-RIFETMRLY 104
++ L+ + +P P+ N+ ++ G + R F + R E +RL
Sbjct: 61 MQGLEQRFAKPAADPE-----NLQCVIVLGGAFENEVNTARHGIEFNGGADRFIEALRLA 115
Query: 105 KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES--GVERDDIKLETQSLDTFQNAQ 162
+ Q I+ISGGD G+ E ++ G+ +D + E QS TF+NA
Sbjct: 116 QKFPQSR----ILISGGDGSISGIYEGDAAASERFFPLFGIGKDRLIEERQSRTTFENAV 171
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-----LNAYYSIIPLS 217
+ + + + +L++S +H+ RS F+ GI+ +DY + +
Sbjct: 172 NTREFLASQGLSHCLLITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRPGLDFTQPN 231
Query: 218 ANFYLTELALKEYIGILIAYYRGNR 242
N A++E+ G LI YY R
Sbjct: 232 LNAQSMATAIREWYG-LIGYYLAGR 255
>gi|167035834|ref|YP_001671065.1| hypothetical protein PputGB1_4845 [Pseudomonas putida GB-1]
gi|166862322|gb|ABZ00730.1| protein of unknown function DUF218 [Pseudomonas putida GB-1]
Length = 253
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 22/197 (11%)
Query: 50 QFSYQRPLLSPQWK---KDGNIIVLLGNGTTIIPTIPAIRIEPSF----QSYSRIFETMR 102
Q + PL+ W + IV+LG G R +P++ Q + E MR
Sbjct: 61 QLETEPPLVVDDWAGLASRADAIVVLGAGRE--------RGDPAWGGSDQPTATALERMR 112
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
+ S ++ SGG +E+ + ++L E + E S T++NAQ
Sbjct: 113 FAARLAKAS-GLPVLTSGGLHYGTPPSEARLMADRLQEDFAVAVKWR-EEASRTTWENAQ 170
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS-----CSDYLNAYYSIIPLS 217
++ +++ + + ++LV+ A+H++RS+ F+ G + D+ + ++P S
Sbjct: 171 LTAKVLQPLGIRRVVLVTQAWHMQRSRWSFEQAGFEVVPAPVGFLGRDHARPFAGLLPES 230
Query: 218 ANFYLTELALKEYIGIL 234
+ + E +G++
Sbjct: 231 RAMWQSGQLFNEVVGLV 247
>gi|229138983|ref|ZP_04267560.1| hypothetical protein bcere0013_20960 [Bacillus cereus BDRD-ST26]
gi|228644338|gb|EEL00593.1| hypothetical protein bcere0013_20960 [Bacillus cereus BDRD-ST26]
Length = 162
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS I
Sbjct: 49 VKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDERRILIEDQSTNTYENVKFS---IDLYDV 105
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
K+ ++VS+ YHL R+++ + G+ +A ++ P+ + ++ ++EY+ I
Sbjct: 106 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE--------TPIRSK---RKMYVREYVAI 154
Query: 234 L 234
+
Sbjct: 155 M 155
>gi|262275607|ref|ZP_06053416.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Grimontia hollisae CIP 101886]
gi|262219415|gb|EEY70731.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Grimontia hollisae CIP 101886]
Length = 271
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 87/165 (52%), Gaps = 16/165 (9%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY 104
LL L+ YQ P L K+ + +++LG+G + +P SR+ MRL
Sbjct: 61 LLIKLERQYQ-PFLPT--KEPVDYVMVLGHGHVVDDELPPT------SELSRV-ALMRLM 110
Query: 105 KSCKQHSMHCT--IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
+ + H M+ T +I+SG D + ++ + + L GV +++I L + DT++ A
Sbjct: 111 EGIRIHFMYPTSKLILSGYD-GGYEVSHARMLARVALAMGVNKNNILLLETAKDTWEEAF 169
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
++S++ + N++LV+SA H+ R+ FQ+ G+N + ++++
Sbjct: 170 QAASVVGD---SNLVLVTSANHMPRAVYEFQNAGLNPIPAPTNFM 211
>gi|126433493|ref|YP_001069184.1| hypothetical protein Mjls_0884 [Mycobacterium sp. JLS]
gi|126233293|gb|ABN96693.1| protein of unknown function DUF218 [Mycobacterium sp. JLS]
Length = 193
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II++GG+P ++G++E+ LL G I +E ++ T QNA+FS + +
Sbjct: 78 QSPIIVTGGNP-RNGVSEAAAMRRMLLVLGFPDHRIIVEDRANSTVQNARFSVPLAEKAG 136
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
IILV+S+ H R+ F G N A+ S
Sbjct: 137 TSGIILVTSSTHQDRADGNFVDAGANLLATVS 168
>gi|108797853|ref|YP_638050.1| hypothetical protein Mmcs_0878 [Mycobacterium sp. MCS]
gi|119866947|ref|YP_936899.1| hypothetical protein Mkms_0895 [Mycobacterium sp. KMS]
gi|108768272|gb|ABG06994.1| protein of unknown function DUF218 [Mycobacterium sp. MCS]
gi|119693036|gb|ABL90109.1| protein of unknown function DUF218 [Mycobacterium sp. KMS]
Length = 193
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II++GG+P ++G++E+ LL G I +E ++ T QNA+FS + +
Sbjct: 78 QSPIIVTGGNP-RNGVSEAAAMRRMLLVLGFPDHRIIVEDKANSTVQNARFSVPLAEKAG 136
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
IILV+S+ H R+ F G N A+ S
Sbjct: 137 TSGIILVTSSTHQDRADGNFVDAGANLLATVS 168
>gi|75911018|ref|YP_325314.1| hypothetical protein Ava_4822 [Anabaena variabilis ATCC 29413]
gi|75704743|gb|ABA24419.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 215
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
EPS RI + LYK + II +GG + + AE+IV + GV+ D
Sbjct: 72 EPSPVFRERINHAINLYK----NGAISKIIFTGGVGEINEPAEAIVGKHYATARGVKTAD 127
Query: 148 IKLETQSLDTFQNAQFSSSMIK-NMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
I ETQS T+QN + + ++ N + +++S HLKR+ L ++ GI+ S
Sbjct: 128 IITETQSRTTYQNLKNAIEVVDTNEKFTKFLIISDPLHLKRAVLMARNLGIDAYPS 183
>gi|157146390|ref|YP_001453709.1| hypothetical protein CKO_02149 [Citrobacter koseri ATCC BAA-895]
gi|157083595|gb|ABV13273.1| hypothetical protein CKO_02149 [Citrobacter koseri ATCC BAA-895]
Length = 259
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 30/208 (14%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIF 98
LLK ++ SY P W+ + IV+LG G T P + PS S R+
Sbjct: 62 LLKPIEDSY------PTWQGTQKVDYIVVLGGGYTWNP-----QWAPSSNLINNSLPRLN 110
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
E +RL+ + + +I +G + + ++ + GV R DI Q DT
Sbjct: 111 EGVRLWLA----NPGSKLIFTGAAAKTNRVSTAEAGARVAQSLGVPRSDIITLDQPKDTE 166
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYS 212
+ A+ I + +LV+SA HL R+ ++FQH G++ + ++ LN +
Sbjct: 167 EEAEAVKQAIGDAP---FLLVTSASHLPRAMIFFQHVGLHPLPAPANQLAIDSPLNPWER 223
Query: 213 IIPLSANFYLTELALKEYIGILIAYYRG 240
IP ++ A E +G + + +G
Sbjct: 224 AIPSPVWLMHSDRAGYETLGRIWQWLKG 251
>gi|307260971|ref|ZP_07542653.1| hypothetical protein appser12_5380 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306869273|gb|EFN01068.1| hypothetical protein appser12_5380 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 252
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI------FETMRLYKSCKQHSMHCTII 117
K IV+LG G + S + + R E MR Y + I+
Sbjct: 80 KKAQAIVVLGGG-----------VRNSHELFGRYAIAAAPLERMR-YAAYLHKQTGLPIL 127
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
++GG P+ I+ L +E+ S T QNA S +M+K II
Sbjct: 128 VTGGSPEGREPEAKIMAQE--LHDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDRII 185
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY----YSIIPLSANFYLTELALKEYIG 232
LV++ +H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 186 LVTNQWHMKRAKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIG 244
>gi|317047567|ref|YP_004115215.1| hypothetical protein Pat9b_1338 [Pantoea sp. At-9b]
gi|316949184|gb|ADU68659.1| protein of unknown function DUF218 [Pantoea sp. At-9b]
Length = 261
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 60 PQWKKDGNI--IVLLGNGTTIIPTIPAIRIEPS----FQSYSRIFETMRLYKSCKQHSMH 113
P W ++ ++ IV+LG G T P PS S R+ E +R ++ Q M
Sbjct: 71 PTWNRNVSVDYIVVLGGGYTFNPDW-----APSSNLIGNSLPRVAEGVRQWRRYPQAKMI 125
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
T +G +P + + ++ ES GV I + Q DT + AQ +K
Sbjct: 126 FTGAAAGNNPMSNARVAA-----QVAESLGVPESVIIVLDQPKDTREEAQ----AVKIAV 176
Query: 173 GKN-IILVSSAYHLKRSQLYFQHFGIN------TKASCSDYLNAYYSIIPLSANFYLTEL 225
G++ +LV+SA HL R+ +FQ G+N + + + LN + +P +E
Sbjct: 177 GQHPFLLVTSANHLPRAMQFFQGAGLNPLPAPANQMAITSPLNGWERALPSPLWLSHSER 236
Query: 226 ALKEYIGILIAYYRGN 241
A+ E +G RG+
Sbjct: 237 AIYETLGRAWQALRGD 252
>gi|302877595|ref|YP_003846159.1| hypothetical protein Galf_0351 [Gallionella capsiferriformans ES-2]
gi|302580384|gb|ADL54395.1| protein of unknown function DUF218 [Gallionella capsiferriformans
ES-2]
Length = 254
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET--MRL-YKSCKQHSMHCTIIISGGD 122
+ IV+LG GT P + + + E +RL Y + Q ++ I+++GG
Sbjct: 78 ASAIVILGGGTYFHA--------PEYDNQDTVSEATLLRLRYGARLQRELNAPILVTGGK 129
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
P +G +E+ +LE E S +TF+NA++S ++ ++I LV+ A
Sbjct: 130 PLGNGTSEAHQMRT-VLEEDFRIPARWTEDASDNTFENARYSYQTLQKAGIRDIYLVTHA 188
Query: 183 YHLKRSQLYFQHFG--INTKASC--SDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+H+ RS F+ G + +C + Y + IP + +++ + E IG+L
Sbjct: 189 WHMLRSAAAFRAAGFVVIEAPTCFTTRYQTNLLAFIPRAEALRDSKIFVHEVIGLL 244
>gi|46143233|ref|ZP_00135637.2| COG1434: Uncharacterized conserved protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207969|ref|YP_001053194.1| hypothetical protein APL_0485 [Actinobacillus pleuropneumoniae L20]
gi|126096761|gb|ABN73589.1| hypothetical protein APL_0485 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
Length = 252
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI------FETMRLYKSCKQHSMHCTII 117
K IV+LG G + S + + R E MR Y + I+
Sbjct: 80 KKAQAIVVLGGG-----------VRNSHELFGRYAIAAAPLERMR-YAAYLHKQTGLPIL 127
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
++GG P+ I+ L +E+ S T QNA S +M+K II
Sbjct: 128 VTGGSPEGREPEAKIMAQE--LHDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDRII 185
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY----YSIIPLSANFYLTELALKEYIG 232
LV++ +H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 186 LVTNQWHMKRAKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIG 244
>gi|229096776|ref|ZP_04227746.1| hypothetical protein bcere0020_20230 [Bacillus cereus Rock3-29]
gi|229115758|ref|ZP_04245160.1| hypothetical protein bcere0017_20490 [Bacillus cereus Rock1-3]
gi|228667641|gb|EEL23081.1| hypothetical protein bcere0017_20490 [Bacillus cereus Rock1-3]
gi|228686618|gb|EEL40526.1| hypothetical protein bcere0020_20230 [Bacillus cereus Rock3-29]
Length = 166
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E +S +T++N +FS +
Sbjct: 53 VKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILMEDRSTNTYENLKFSMDLF---DV 109
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + GI +A ++
Sbjct: 110 KHAVVVSNTYHLYRTKIIARRLGIKMEALAAE 141
>gi|229178646|ref|ZP_04306010.1| hypothetical protein bcere0005_20040 [Bacillus cereus 172560W]
gi|228604804|gb|EEK62261.1| hypothetical protein bcere0005_20040 [Bacillus cereus 172560W]
Length = 166
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 53 AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDLY---NV 109
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 110 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 141
>gi|326803127|ref|YP_004320945.1| hypothetical protein HMPREF9243_0621 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651604|gb|AEA01787.1| conserved hypothetical protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 190
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G ER+++ E Q+ T+ NA S ++ ++ + I+V+S YH++R++L FQ +
Sbjct: 87 GAERENLIEENQATSTWTNATTSLDLMDDLGYHSAIVVTSDYHMRRTRLAFQRANRDYGF 146
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKE---YIG 232
+ Y++AYY P + Y ++AL+E YIG
Sbjct: 147 QLT-YVSAYYQGQPYPKHPYTQKMALQELYKYIG 179
>gi|163852963|ref|YP_001641006.1| hypothetical protein Mext_3555 [Methylobacterium extorquens PA1]
gi|163664568|gb|ABY31935.1| protein of unknown function DUF218 [Methylobacterium extorquens
PA1]
Length = 275
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 94/219 (42%), Gaps = 23/219 (10%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
++ F L W ++P Q RP+ DG I++L G + +
Sbjct: 35 LATFSGLTPLANWALLPLEQRFPAQVDDVRPV-------DG--IIVLSGGIDLTTSRTRG 85
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG----LAESIVYNNKLLES 141
R+E + + RI + L Q ++ +GGDP G E+++ L
Sbjct: 86 RLELN-DAGDRITALIDLAHRYPQ----ARLVYTGGDPYPTGGRARPTEAVLAAAYLEGI 140
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ I +E +S T +NA +++ G+ +L++SA+H+ R+ F+ G+ +
Sbjct: 141 GIAPARITVEARSRTTAENASEVRKLLEPHPGERWLLITSAWHMPRAMGAFRRVGLELEP 200
Query: 202 SCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILI 235
D+ A ++ + +L ++A KE+ G+++
Sbjct: 201 YPVDFRTAGPFATRFTFRHAADGLHLLDVAAKEWAGLVV 239
>gi|312881496|ref|ZP_07741288.1| hypothetical protein VIBC2010_02326 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370862|gb|EFP98322.1| hypothetical protein VIBC2010_02326 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 254
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 27/218 (12%)
Query: 28 CFMLLFSFIG-----WGIIPTILLKHLQFSYQR--PLLSPQWKKDGNIIVLLGNGTTIIP 80
C ++LFSFIG + I + LL L+ Y P+ P + +++LG+G +
Sbjct: 27 CVIVLFSFIGLFLASFQPISSRLLMPLERQYTAFFPIDEPI-----DYVMVLGSGHIVDD 81
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
IP E S R+ E +R+ + + + +G D + + L
Sbjct: 82 KIPPTS-ELSRSGLMRLAEGIRILRMYPGSKLILSGYAAGSDVSNARMMAKVA-----LA 135
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV + DI L + DT++ A+ +++ + N KN+I+V+SA ++KR+ F G+
Sbjct: 136 LGVAKPDIILLETAKDTWEEARQAAAFVNN---KNLIVVTSASNMKRALNEFYSAGLKPY 192
Query: 201 ASCSDYL------NAYYSIIPLSANFYLTELALKEYIG 232
+ ++YL + P S TEL E +G
Sbjct: 193 PAPTNYLAQKNIDTPWVKYTPKSTYLEQTELYWHETLG 230
>gi|148380856|ref|YP_001255397.1| hypothetical protein CBO2900 [Clostridium botulinum A str. ATCC
3502]
gi|153931082|ref|YP_001385163.1| hypothetical protein CLB_2864 [Clostridium botulinum A str. ATCC
19397]
gi|153935289|ref|YP_001388632.1| hypothetical protein CLC_2797 [Clostridium botulinum A str. Hall]
gi|148290340|emb|CAL84464.1| putative exported protein [Clostridium botulinum A str. ATCC 3502]
gi|152927126|gb|ABS32626.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
19397]
gi|152931203|gb|ABS36702.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
Length = 197
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ E +RLY II+SG ++E+ L++ G+++ I E +S
Sbjct: 65 RLDEGLRLY----NDGYGKYIIVSGAKGPGENISEAEAMQKYLVQKGLDKKFIIPEDKSR 120
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+T +N +FS +++ + I+VS+ YHLKR++L Q GI KAS S
Sbjct: 121 NTLENIKFSKKKMEDNNLSSSIIVSNKYHLKRAELLCQKEGI--KASYS 167
>gi|289209654|ref|YP_003461720.1| hypothetical protein TK90_2494 [Thioalkalivibrio sp. K90mix]
gi|288945285|gb|ADC72984.1| protein of unknown function DUF218 [Thioalkalivibrio sp. K90mix]
Length = 215
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
Y + H +++SGG P++ + E+ L E GV I E + DT+ NA+
Sbjct: 73 YAAYLHHRTGLPVMVSGGGPEER-VPEADYMAEVLKEYGVH--PILREPNARDTWGNARH 129
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN-TKASCSDYL---NAY--YSIIPLS 217
S+ + + + LVS A+H+ R+ F+ G+ A Y+ N + P +
Sbjct: 130 SAEQLHAEGIERVALVSHAHHMPRATWSFERAGLEIIPAPTGAYVPRDNGWSLEGFRPQA 189
Query: 218 ANFYLTELALKEYIGILIAYYR 239
+ + + LAL EY G +A+YR
Sbjct: 190 SAVWASWLALHEYWG--MAWYR 209
>gi|42781376|ref|NP_978623.1| hypothetical protein BCE_2312 [Bacillus cereus ATCC 10987]
gi|229196506|ref|ZP_04323250.1| hypothetical protein bcere0001_20640 [Bacillus cereus m1293]
gi|42737298|gb|AAS41231.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
gi|228586862|gb|EEK44936.1| hypothetical protein bcere0001_20640 [Bacillus cereus m1293]
Length = 185
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS I
Sbjct: 72 AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFS---IDLYDV 128
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 129 KHAVVVSNTYHLYRTKIIAKRLGMRMEALAAE 160
>gi|229161248|ref|ZP_04289235.1| hypothetical protein bcere0009_20370 [Bacillus cereus R309803]
gi|228622344|gb|EEK79183.1| hypothetical protein bcere0009_20370 [Bacillus cereus R309803]
Length = 166
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 53 AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDDSRILIEDQSTNTYENVKFSMDLY---DV 109
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 110 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 141
>gi|255744859|ref|ZP_05418809.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholera CIRS 101]
gi|262161858|ref|ZP_06030876.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae INDRE 91/1]
gi|262189661|ref|ZP_06048039.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae CT 5369-93]
gi|255737330|gb|EET92725.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholera CIRS 101]
gi|262028590|gb|EEY47245.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae INDRE 91/1]
gi|262034459|gb|EEY52821.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae CT 5369-93]
gi|327484319|gb|AEA78726.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio cholerae LMA3894-4]
Length = 273
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 39/227 (17%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTII 79
C ++LFS G + + T LL L+ +Y L +G + +++LGNG I
Sbjct: 38 GCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL-----PVEGTLDYVMVLGNGHVID 92
Query: 80 PTIPAIRIEPSFQSYSRIFETMR---LYKSCKQHSMHCTIIISG---GDPQKHGLAESIV 133
IP E + + R+ E +R +Y K +I+SG G H + V
Sbjct: 93 DDIPPTS-ELTRAALMRLTEGIRISRMYPGSK-------LILSGYAGGSEVSHARMMARV 144
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L GV + DI L + DT++ A+ +++ + Q K ++LV+SA H+KR+ F+
Sbjct: 145 A----LALGVPKSDIILLETAKDTWEEARQAAAFV---QQKRMVLVTSASHMKRAMREFE 197
Query: 194 HFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGIL 234
G+ + ++YL + IP S TE E +G++
Sbjct: 198 SAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLEQTEQYWHETLGLM 244
>gi|303252155|ref|ZP_07338323.1| hypothetical protein APP2_1129 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247491|ref|ZP_07529536.1| hypothetical protein appser2_4870 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302648938|gb|EFL79126.1| hypothetical protein APP2_1129 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855994|gb|EFM88152.1| hypothetical protein appser2_4870 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 252
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI------FETMRLYKSCKQHSMHCTII 117
K IV+LG G + S + + R E MR Y + I+
Sbjct: 80 KKAQAIVVLGGG-----------VRNSHELFGRYAIAAAPLERMR-YAAYLHKQTGLPIL 127
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
++GG P+ I+ L +E+ S T QNA S +M+K II
Sbjct: 128 VTGGSPEGREPEAKIMAQE--LHDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDRII 185
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY----YSIIPLSANFYLTELALKEYIG 232
LV++ +H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 186 LVTNQWHMKRTKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIG 244
>gi|262165878|ref|ZP_06033615.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio mimicus VM223]
gi|262025594|gb|EEY44262.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio mimicus VM223]
Length = 278
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 28 CFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIP 80
C ++LFS G + + T LL L+ +Y L +G+I +++LG+G +
Sbjct: 39 CLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL-----PVEGSIDYVMILGSGHVVDD 93
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
IP E S + R+ E +R+ + M + G + + + + L
Sbjct: 94 DIPPTS-ELSRAALMRLTEGIRISRMYPGSKMILSGYAGGSE-----FSHARMMARVALA 147
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV + DI L + DT++ A+ +++ + Q K ++LV+SA H+KR+ F+ G+
Sbjct: 148 LGVPKSDIILLETAKDTWEEARQAAAFV---QQKRMVLVTSASHMKRAMREFESAGLTPI 204
Query: 201 ASCSDYLN 208
+ ++YL
Sbjct: 205 PAPTNYLG 212
>gi|163940067|ref|YP_001644951.1| hypothetical protein BcerKBAB4_2098 [Bacillus weihenstephanensis
KBAB4]
gi|163862264|gb|ABY43323.1| protein of unknown function DUF218 [Bacillus weihenstephanensis
KBAB4]
Length = 185
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ + I +E +S +T++N +FS +
Sbjct: 72 VKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDENRILIEDRSTNTYENLKFSMDL---YDV 128
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + GI +A ++
Sbjct: 129 KHAVVVSNTYHLYRTKIIAKRLGIKMEALAAE 160
>gi|308048831|ref|YP_003912397.1| hypothetical protein Fbal_1114 [Ferrimonas balearica DSM 9799]
gi|307631021|gb|ADN75323.1| protein of unknown function DUF218 [Ferrimonas balearica DSM 9799]
Length = 243
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 18/179 (10%)
Query: 62 WKKDGNI--IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
W+ + +++LG+ + P A + S + R+ E +R++++ T+++S
Sbjct: 71 WQPGAEVAYVLVLGSSHSSHPDR-AATAQLSATALGRLMEGIRVWRANPD----ATLVLS 125
Query: 120 G---GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
G DP H AE + +E GV I Q+ DT Q A+ ++ ++
Sbjct: 126 GFAGSDPTPH--AE--LMKCAAIEQGVPESHIHTFPQARDTEQEARLTAPLVG---AAPA 178
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA-NFYLTELALKEYIGIL 234
+LV+SA H+ R+ +Q G++ + +D++ SA N + ++ + EY+G L
Sbjct: 179 VLVTSASHMDRALSLYQAQGLSVTPAATDFIAQPTRAWYFSARNLWTSQRVIHEYLGQL 237
>gi|330938257|gb|EGH41926.1| hypothetical protein PSYPI_05668 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 256
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 31/196 (15%)
Query: 56 PLLSPQWK---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI---FETMRLYKSCKQ 109
PL QW + + IV+LGNG R P++ + + E +RL +
Sbjct: 67 PLPQQQWATLAQQADAIVVLGNGRE--------RNSPTWGTDTPTGLGLERLRLAARLAK 118
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL-----ETQSLDTFQNAQFS 164
S I+ SGG +E+ + L +DD + E S T++NA S
Sbjct: 119 ES-GLPILTSGGLHFDQPPSEASIMAQSL------QDDFAVAVRWQEGLSRTTWENATMS 171
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSAN 219
+++++ K ++LV+ A+H+ R++ F+ G + +L + +P S
Sbjct: 172 AAILQPQGIKRVVLVTQAWHMPRARWSFEQAGFTVVGAPVGFLGVDNARPFGGWLPESRV 231
Query: 220 FYLTELALKEYIGILI 235
F + + L E G+L+
Sbjct: 232 FTQSGVLLNEAAGLLV 247
>gi|260779195|ref|ZP_05888087.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605359|gb|EEX31654.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio coralliilyticus ATCC
BAA-450]
Length = 267
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 37/195 (18%)
Query: 28 CFMLLFSFIGWGIIP-----TILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIP 80
CF++LFSFIG +I + LL L+ Y S + D I +++LG+G +
Sbjct: 39 CFVVLFSFIGIFLIAFQPVSSRLLMPLERQY-----SAFFPVDETIDYVMVLGSGHVVDD 93
Query: 81 TIPAIRIEPSFQSYSRIFE---TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
IP E S R+ E MR+Y K +I+SG G +E V N +
Sbjct: 94 KIPPTS-ELSRTGLMRLAEGIRIMRIYPGSK-------LILSG----YAGGSE--VSNAR 139
Query: 138 LLES-----GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
++ GV + DI L + DT++ A+ +++ +K K +++V+SA H+KR+ F
Sbjct: 140 MMAKVALALGVSKSDIILLETAKDTWEEARQAAAFVKR---KKLVVVTSASHMKRALNEF 196
Query: 193 QHFGINTKASCSDYL 207
G+ + ++YL
Sbjct: 197 HSAGLKPYPAPTNYL 211
>gi|121727926|ref|ZP_01680974.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147675084|ref|YP_001217265.1| hypothetical protein VC0395_A1321 [Vibrio cholerae O395]
gi|121629776|gb|EAX62192.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|146316967|gb|ABQ21506.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227013622|gb|ACP09832.1| conserved hypothetical protein [Vibrio cholerae O395]
Length = 282
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 28 CFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIP 80
C ++LFS G + + T LL L+ +Y L +G + +++LGNG I
Sbjct: 48 CLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL-----PVEGTLDYVMVLGNGHVIDD 102
Query: 81 TIPAIRIEPSFQSYSRIFETMR---LYKSCKQHSMHCTIIISG---GDPQKHGLAESIVY 134
IP E + + R+ E +R +Y K +I+SG G H + V
Sbjct: 103 DIPPTS-ELTRAALMRLTEGIRISRMYPGSK-------LILSGYAGGSEVSHARMMARVA 154
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L GV + DI L + DT++ A+ +++ + Q K ++LV+SA H+KR+ F+
Sbjct: 155 ----LALGVPKSDIILLETAKDTWEEARQAAAFV---QQKRMVLVTSASHMKRAMREFES 207
Query: 195 FGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGIL 234
G+ + ++YL + IP S TE E +G++
Sbjct: 208 AGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLEQTEQYWHETLGLM 253
>gi|254409849|ref|ZP_05023630.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196183846|gb|EDX78829.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 325
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 49 LQFSYQRPLLSPQ--WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKS 106
L S ++ +++P+ + + IV+LG GTT P +++ + + RI +LY+
Sbjct: 110 LAASTEQAVVTPESAAAQTASAIVVLGQGTTQPDEPPRTQVQLT-DTGDRILYAAQLYRQ 168
Query: 107 CKQHSMHCTIIISGGDPQKHGLAESIVYNNK----LLESGVERDDIKLETQSLDTFQNAQ 162
+ + ++ +G P G + IV N L++ GV + I LE ++ +A+
Sbjct: 169 SGNNPL--VVVSAGPRPNLQGNQDQIVEANDIRSLLVQFGVPQSRIVLEPTGINLRTSAE 226
Query: 163 FSSSMIKN--MQGKNIILVSSAYHLKRSQLYFQHFGINT-----------KASCSDYLNA 209
++++ + + LV+SAY+ +R+Q F+ G+N + + +N
Sbjct: 227 EVEDILRDRGIADNRVFLVTSAYNSRRAQQAFRSVGLNNVVAKPTGFFTVQPGTTSTINQ 286
Query: 210 Y-YSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ S IP +T ++E+ + Y RG
Sbjct: 287 WIESFIPSVEALTVTTRIVEEFYASIYYYLRG 318
>gi|152969504|ref|YP_001334613.1| hypothetical protein KPN_00947 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238893976|ref|YP_002918710.1| hypothetical protein KP1_1920 [Klebsiella pneumoniae NTUH-K2044]
gi|262040981|ref|ZP_06014203.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|150954353|gb|ABR76383.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238546292|dbj|BAH62643.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259041675|gb|EEW42724.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 259
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 32/210 (15%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDG--NIIVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIF 98
LLK ++ +Y P W+ + N +V+LG G T P PS S R+
Sbjct: 62 LLKPIEDTY------PTWRGEQPVNYVVVLGGGYTWNP-----EWAPSSNLINNSLPRLT 110
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDT 157
E +RL+++ M T G K + ++ ES GV R DI + + DT
Sbjct: 111 EGIRLWQANPGSKMIFT-----GAAAKTNPVSTAEAGARVAESLGVPRSDIIVLDRPKDT 165
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN------TKASCSDYLNAYY 211
+ A I + +LV+SA HL R+ ++F+H G++ + + + LN +
Sbjct: 166 EEEALAVKRAIGDAP---FLLVTSASHLPRAMIFFRHAGLDPLPAPANQLAVTSPLNPWE 222
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYRGN 241
IP ++ E +G + + +G+
Sbjct: 223 RAIPSPVWLMHSDRVGYETLGRVWQWLKGS 252
>gi|229044023|ref|ZP_04191712.1| hypothetical protein bcere0027_20620 [Bacillus cereus AH676]
gi|228725304|gb|EEL76572.1| hypothetical protein bcere0027_20620 [Bacillus cereus AH676]
Length = 162
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 49 AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDL---YNV 105
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 106 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 137
>gi|66047577|ref|YP_237418.1| hypothetical protein Psyr_4350 [Pseudomonas syringae pv. syringae
B728a]
gi|63258284|gb|AAY39380.1| Protein of unknown function DUF218 [Pseudomonas syringae pv.
syringae B728a]
Length = 256
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 36/208 (17%)
Query: 49 LQFSYQR-----PLLSPQWK---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI--- 97
++F+ +R PL +W + + IV+LGNG R P++ + +
Sbjct: 55 VEFAARRLEQIPPLPQQRWAMLAQQADAIVVLGNGRE--------RNSPTWGTDTPTGLG 106
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL-----ET 152
E +RL + S I+ SGG +E+ + L +DD + E
Sbjct: 107 LERLRLAARLAKES-GLPILTSGGLHFDQPPSEAAIMAQSL------QDDFAVTVRWQEG 159
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN---- 208
S T++NA S+++++ K ++LV+ A+H+ R++ F+ G + +L
Sbjct: 160 LSRTTWENATMSAAILQPQGIKRVVLVTQAWHMPRARWSFEQAGFTVVGAPVGFLGVDNA 219
Query: 209 -AYYSIIPLSANFYLTELALKEYIGILI 235
+ +P S F + + L E G+L+
Sbjct: 220 RPFGGWLPESRVFTQSGMLLNEAAGLLV 247
>gi|229029997|ref|ZP_04186062.1| hypothetical protein bcere0028_20790 [Bacillus cereus AH1271]
gi|229079448|ref|ZP_04211988.1| hypothetical protein bcere0023_21020 [Bacillus cereus Rock4-2]
gi|228703818|gb|EEL56264.1| hypothetical protein bcere0023_21020 [Bacillus cereus Rock4-2]
gi|228731258|gb|EEL82175.1| hypothetical protein bcere0028_20790 [Bacillus cereus AH1271]
Length = 162
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 49 AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDL---YNV 105
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 106 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 137
>gi|311105207|ref|YP_003978060.1| hypothetical protein AXYL_02016 [Achromobacter xylosoxidans A8]
gi|310759896|gb|ADP15345.1| hypothetical protein AXYL_02016 [Achromobacter xylosoxidans A8]
Length = 254
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 94/229 (41%), Gaps = 16/229 (6%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+RK L + W + T L + P L+P + IV+LG T
Sbjct: 32 LRKTGGALIVAGLLWALAWSLPATSLWLGGALESRYPHLAPSESPTADAIVVLGGNT--- 88
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQH--SMHCTIIISGGDPQKHGLAESIVYNNK 137
A F Y + +R+ + + + +++SGG + ++E+ +
Sbjct: 89 ----ANGRANWFLPYDKDTAVVRVDTAAQLYLAGRAPKVLLSGGALEGD-VSEARGMAHA 143
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+ + GV + LE S T++NA + +K+ ++LV+SA H+ R+ F G+
Sbjct: 144 IRQQGVPETALILENSSRTTYENAALTEDQLKSRGIGKVLLVTSALHMPRAMAAFSKQGV 203
Query: 198 NTKASCSD---YLNAYYSI---IPLSANFYLTELALKEYIGILIAYYRG 240
A+ + A S+ +P F + +KEY G+ + + RG
Sbjct: 204 EAVAAPAPPQIVAPADGSLPLWLPDQRTFDASRSIIKEYAGLFVYWLRG 252
>gi|289675765|ref|ZP_06496655.1| hypothetical protein PsyrpsF_21006 [Pseudomonas syringae pv.
syringae FF5]
Length = 256
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 31/196 (15%)
Query: 56 PLLSPQWK---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI---FETMRLYKSCKQ 109
PL QW + + IV+LGNG R P++ + + E +RL +
Sbjct: 67 PLPQQQWATLAQQADAIVVLGNGRE--------RNSPTWGTDTPTGLGLERLRLAARLAK 118
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL-----ETQSLDTFQNAQFS 164
S I+ SGG +E+ + L +DD + E S T++NA S
Sbjct: 119 ES-GLPILTSGGLHFDQPPSEASIMAQSL------QDDFAVAVRWQEGLSRTTWENATMS 171
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSAN 219
+++++ K ++LV+ A+H+ R++ F+ G + +L + +P S
Sbjct: 172 AAILQPQGIKRVVLVTQAWHMPRARWSFEQAGFTVVGAPVGFLGVDNARPFGGWLPESRV 231
Query: 220 FYLTELALKEYIGILI 235
F + + L E G+L+
Sbjct: 232 FTQSGVLLNEAAGLLV 247
>gi|15641722|ref|NP_231354.1| hypothetical protein VC1718 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121585785|ref|ZP_01675579.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|153212106|ref|ZP_01947923.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|153817128|ref|ZP_01969795.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153823662|ref|ZP_01976329.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|153825454|ref|ZP_01978121.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|153827934|ref|ZP_01980601.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|227081867|ref|YP_002810418.1| hypothetical protein VCM66_1658 [Vibrio cholerae M66-2]
gi|229508174|ref|ZP_04397679.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae BX 330286]
gi|229511588|ref|ZP_04401067.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae B33]
gi|229515111|ref|ZP_04404571.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae TMA 21]
gi|229518727|ref|ZP_04408170.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae RC9]
gi|229520681|ref|ZP_04410104.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae TM 11079-80]
gi|229607747|ref|YP_002878395.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae MJ-1236]
gi|254224867|ref|ZP_04918482.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|254285337|ref|ZP_04960302.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|254848836|ref|ZP_05238186.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297579300|ref|ZP_06941228.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|298498204|ref|ZP_07008011.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9656238|gb|AAF94868.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549923|gb|EAX59941.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|124116902|gb|EAY35722.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|125622555|gb|EAZ50874.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|126512277|gb|EAZ74871.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126518811|gb|EAZ76034.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|148876515|gb|EDL74650.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|149740866|gb|EDM54951.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|150424609|gb|EDN16545.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|227009755|gb|ACP05967.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|229342236|gb|EEO07231.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae TM 11079-80]
gi|229343416|gb|EEO08391.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae RC9]
gi|229347816|gb|EEO12775.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae TMA 21]
gi|229351553|gb|EEO16494.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae B33]
gi|229355679|gb|EEO20600.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae BX 330286]
gi|229370402|gb|ACQ60825.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae MJ-1236]
gi|254844541|gb|EET22955.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297536894|gb|EFH75727.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297542537|gb|EFH78587.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 282
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 28 CFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIP 80
C ++LFS G + + T LL L+ +Y L +G + +++LGNG I
Sbjct: 48 CLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL-----PVEGTLDYVMVLGNGHVIDD 102
Query: 81 TIPAIRIEPSFQSYSRIFETMR---LYKSCKQHSMHCTIIISG---GDPQKHGLAESIVY 134
IP E + + R+ E +R +Y K +I+SG G H + V
Sbjct: 103 DIPPTS-ELTRAALMRLTEGIRISRMYPGSK-------LILSGYAGGSEVSHARMMARVA 154
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L GV + DI L + DT++ A+ +++ + Q K ++LV+SA H+KR+ F+
Sbjct: 155 ----LALGVPKSDIILLETAKDTWEEARQAAAFV---QQKRMVLVTSASHMKRAMREFES 207
Query: 195 FGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGIL 234
G+ + ++YL + IP S TE E +G++
Sbjct: 208 AGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLEQTEQYWHETLGLM 253
>gi|229529254|ref|ZP_04418644.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio cholerae 12129(1)]
gi|229333028|gb|EEN98514.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio cholerae 12129(1)]
Length = 282
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 28 CFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIP 80
C ++LFS G + + T LL L+ +Y L +G + +++LGNG I
Sbjct: 48 CLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL-----PVEGTLDYVMVLGNGHVIDD 102
Query: 81 TIPAIRIEPSFQSYSRIFETMR---LYKSCKQHSMHCTIIISG---GDPQKHGLAESIVY 134
IP E + + R+ E +R +Y K +I+SG G H + V
Sbjct: 103 DIPPTS-ELTRAALMRLTEGIRISRMYPGSK-------LILSGYAGGSEVSHARMMARVA 154
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L GV + DI L + DT++ A+ +++ + Q K ++LV+SA H+KR+ F+
Sbjct: 155 ----LALGVPKSDIILLETAKDTWEEARQAAAFV---QQKRMVLVTSASHMKRAMREFES 207
Query: 195 FGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGIL 234
G+ + ++YL + IP S TE E +G++
Sbjct: 208 AGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLEQTEQYWHETLGLM 253
>gi|228991260|ref|ZP_04151218.1| hypothetical protein bpmyx0001_20190 [Bacillus pseudomycoides DSM
12442]
gi|228768484|gb|EEM17089.1| hypothetical protein bpmyx0001_20190 [Bacillus pseudomycoides DSM
12442]
Length = 185
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG + + E+ N L++ G+E + I +E +S T++N +FS + M
Sbjct: 74 VIVSGGQGEDEDIPEAHSMRNYLIKHGIEENRIFIEDRSTSTYENLKFSMDLYHVMHA-- 131
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKA 201
++VS+ YHL R+++ + G+ ++
Sbjct: 132 -VVVSNTYHLYRTKIIAKRLGMQMES 156
>gi|301053815|ref|YP_003792026.1| hypothetical protein BACI_c22410 [Bacillus anthracis CI]
gi|300375984|gb|ADK04888.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
Length = 185
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 72 VKVIVSGGQGEDEDIPEAHSMRNYLMARGIDESRILIEDQSTNTYENVKFSMDLY---DV 128
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ + ++
Sbjct: 129 KHAVVVSNTYHLYRTKIIAKRLGMKMETLAAE 160
>gi|295695151|ref|YP_003588389.1| protein of unknown function DUF218 [Bacillus tusciae DSM 2912]
gi|295410753|gb|ADG05245.1| protein of unknown function DUF218 [Bacillus tusciae DSM 2912]
Length = 188
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
EP +R+ + LY+ I++SGG + +E+ V + L GV
Sbjct: 43 EPGAALRARLEAGLDLYR----RGYAPRILVSGGQRRPGAPSEADVMADYLRVRGVPPRA 98
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA---SCS 204
+ +E S DT +N FSS ++K + ++V+SAYHL R+ + G++ + +
Sbjct: 99 LIVEDLSSDTVENLLFSSRLMKIHGWRRAVVVTSAYHLPRALWLARLAGLDASGYAPASA 158
Query: 205 DYLNAY 210
D L +
Sbjct: 159 DVLGTW 164
>gi|2196513|gb|AAB61159.1| putative membrane protein [Staphylococcus epidermidis]
Length = 330
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 32/171 (18%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
I++LG+G + ++ P QS RI + S K H ++SGG + +
Sbjct: 162 IIVLGSG------LIEDKVPPLLQS--RIDIGKNFWDSKKDK--HTKFLLSGGQGKDERI 211
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ES L+ GV + I E +S T++N +FS S+I + II+ S+ YH+ R+
Sbjct: 212 SESQAMKKYLIAQGVNENRIICENKSQSTYENLKFSKSLIS--KNATIIICSNNYHILRA 269
Query: 189 -----QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+L + HF YS+ + N++ T ++E + IL
Sbjct: 270 VFIAKKLKYSHF---------------YSLGSKTKNYFFTNAFIRELVAIL 305
>gi|330013999|ref|ZP_08307835.1| hypothetical protein HMPREF9538_05555 [Klebsiella sp. MS 92-3]
gi|328533292|gb|EGF60043.1| hypothetical protein HMPREF9538_05555 [Klebsiella sp. MS 92-3]
Length = 259
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 32/210 (15%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDG--NIIVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIF 98
LLK ++ +Y P W+ + N +V+LG G T P PS S R+
Sbjct: 62 LLKPIEDTY------PTWRGEQPVNYVVVLGGGYTWNP-----EWAPSSNLINNSLPRLT 110
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDT 157
E +RL+++ M T G K + ++ ES GV R DI + + DT
Sbjct: 111 EGIRLWQANPGSKMIFT-----GAAAKTNPVSTAEAGARVAESLGVPRSDIIVLGRPKDT 165
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN------TKASCSDYLNAYY 211
+ A I + +LV+SA HL R+ ++F+H G++ + + + LN +
Sbjct: 166 EEEALAVKRAIGDAP---FLLVTSASHLPRAMIFFRHAGLDPLPAPANQLAVTSPLNPWE 222
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYRGN 241
IP ++ E +G + + +G+
Sbjct: 223 RAIPSPVWLMHSDRVGYETLGRVWQWLKGS 252
>gi|328543434|ref|YP_004303543.1| hypothetical protein [polymorphum gilvum SL003B-26A1]
gi|326413179|gb|ADZ70242.1| DUF218 protein [Polymorphum gilvum SL003B-26A1]
Length = 265
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
+L+ L+ + P P+ DG I+VL G T++ + F + E + +
Sbjct: 60 LLMVPLEDRFPAPSTLPE-TVDG-ILVLGGAIDTVVTG------KRPFPGLTTAGERVAV 111
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN-KLLES-GVERDDIKLETQSLDTFQNA 161
+ I+ SGG G + + +L ES G+ D + LE +SL+T+QNA
Sbjct: 112 IPGLARRYPQALIVHSGGSGLLFGNSSTEAEGAAQLFESFGLAPDRLVLEDRSLNTWQNA 171
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT---------KASCSDYLNAYYS 212
++ ++++ G+ +LV+SA H+ R+ F+ G D L + +
Sbjct: 172 VYTKALVEPRAGQTWLLVTSAMHMPRAVGVFRKAGWTGVVPYPVDWRTRGPEDRLRVFGA 231
Query: 213 IIPLSANFYLTELALKEYIGILIAYYRGNR 242
+ S ++A +E++G L+AY R
Sbjct: 232 V---SDGLTRLDIAFREWVG-LVAYRASGR 257
>gi|229011547|ref|ZP_04168733.1| hypothetical protein bmyco0001_19960 [Bacillus mycoides DSM 2048]
gi|229059943|ref|ZP_04197317.1| hypothetical protein bcere0026_20500 [Bacillus cereus AH603]
gi|229133107|ref|ZP_04261943.1| hypothetical protein bcere0014_20300 [Bacillus cereus BDRD-ST196]
gi|228650316|gb|EEL06315.1| hypothetical protein bcere0014_20300 [Bacillus cereus BDRD-ST196]
gi|228719356|gb|EEL70960.1| hypothetical protein bcere0026_20500 [Bacillus cereus AH603]
gi|228749702|gb|EEL99541.1| hypothetical protein bmyco0001_19960 [Bacillus mycoides DSM 2048]
Length = 166
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ + I +E +S +T++N +FS +
Sbjct: 53 VKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDENRILIEDRSTNTYENLKFSMDL---YDV 109
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + GI +A ++
Sbjct: 110 KHAVVVSNTYHLYRTKIIAKRLGIKMEALAAE 141
>gi|258404265|ref|YP_003197007.1| hypothetical protein Dret_0127 [Desulfohalobium retbaense DSM 5692]
gi|257796492|gb|ACV67429.1| protein of unknown function DUF218 [Desulfohalobium retbaense DSM
5692]
Length = 258
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 33/191 (17%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D +V+LG G P +P + + + R+ E +R+ + T+++SG +
Sbjct: 82 DAQWVVVLGGGHASDPGLP-VSAKVGTSTMYRLVEGVRIVRQLP----GATLLLSGYAGK 136
Query: 125 --------KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN- 175
K LA+++ Y L+ LE + DT Q A +MI G+
Sbjct: 137 EAVSNARIKADLAKALGYEGPLV----------LEERPRDTAQEA----AMITERLGQAP 182
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-----IPLSANFYLTELALKEY 230
+LV+SA H+ R+ FQ G + A+ + +L ++ P + + Y + A+ EY
Sbjct: 183 FVLVTSASHMPRAMALFQGQGSHPIAAPTGHLAPREALQAWDWFPNAQDAYCLQRAVYEY 242
Query: 231 IGILIAYYRGN 241
+G+ A+ RG
Sbjct: 243 LGLGWAWLRGQ 253
>gi|187478721|ref|YP_786745.1| membrane protein [Bordetella avium 197N]
gi|115423307|emb|CAJ49841.1| putative membrane protein [Bordetella avium 197N]
Length = 254
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
W + T L ++ P L P + IV+LG T A F Y +
Sbjct: 50 WSLPATSLWLGGALEHRYPYLEPDSAPTADAIVVLGGNT-------ANGRANWFLPYDKD 102
Query: 98 FETMRLYKSCKQH--SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
+R+ + + +++SGG + + ++E+ +++ + GV + LE S
Sbjct: 103 TAVVRVDTATDLYLADRAPKVVLSGGALEGN-VSEAQGMAHRMRQRGVPDSALVLENASR 161
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS------DYLNA 209
+T++NA + ++ ++LV+SA H+ R+ F G+ A+ + +
Sbjct: 162 NTYENAALTEDTLRANHISKVLLVTSALHMPRAMAAFSKQGVEAIAAPTPPQIVPPTDGS 221
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+P + +KEY G+L+ + RG
Sbjct: 222 LSPWMPDMRTLDASRSIIKEYAGLLVYWLRG 252
>gi|146308799|ref|YP_001189264.1| hypothetical protein Pmen_3784 [Pseudomonas mendocina ymp]
gi|145577000|gb|ABP86532.1| protein of unknown function DUF218 [Pseudomonas mendocina ymp]
Length = 256
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 79/193 (40%), Gaps = 16/193 (8%)
Query: 50 QFSYQRPLLSPQWK---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKS 106
Q + L QW + + IV+LG G + +P + R+ RL ++
Sbjct: 61 QLEREPALAEAQWPSLAQRADAIVILGAGREQGDPGWGLVDQPGLMALERLRYAARLARA 120
Query: 107 CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL-ETQSLDTFQNAQFSS 165
+ G P + L ++ + LE I+ E QS T++NAQ S+
Sbjct: 121 SGLPLAATGGLHYGQPPSEAALMADVMQRDYGLE-------IRWREEQSRTTWENAQLSA 173
Query: 166 SMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANF 220
+++ + ++LV+ A+H+ R++ F+ G + +L+ Y +P S
Sbjct: 174 ELLQAQGVRRVVLVTQAWHMPRARWCFEQAGFEVITAPMGFLSKGYERPLGGWLPESRAI 233
Query: 221 YLTELALKEYIGI 233
+ L E +G+
Sbjct: 234 WQNSQLLNEALGL 246
>gi|229172971|ref|ZP_04300523.1| hypothetical protein bcere0006_20790 [Bacillus cereus MM3]
gi|228610491|gb|EEK67761.1| hypothetical protein bcere0006_20790 [Bacillus cereus MM3]
Length = 201
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 87 EAKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDLY---D 143
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 144 VKHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 176
>gi|227496423|ref|ZP_03926709.1| integral membrane protein [Actinomyces urogenitalis DSM 15434]
gi|226834042|gb|EEH66425.1| integral membrane protein [Actinomyces urogenitalis DSM 15434]
Length = 363
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 20/145 (13%)
Query: 99 ETMRLYKSC---KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
E R KS + S +++SGG +E+ + GV R+DI LE +S
Sbjct: 201 EAARRQKSSSDGEAASGRPVLVMSGGQGDDEPTSEASAMAEYAVGLGVPREDIVLEDRST 260
Query: 156 DTFQNAQFSSSMIKNMQGKN------IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
T +N F+ ++ ++ ++ ++LV+S+YH R+ + SD +
Sbjct: 261 TTRENIAFTRELLADLGARHNVSYDQVLLVTSSYHAVRTAIL-----------ASDMETS 309
Query: 210 YYSIIPLSANFYLTELALKEYIGIL 234
+ +A +Y+ L+EY+ +L
Sbjct: 310 WAVAPAPTARYYVINAWLREYVAVL 334
>gi|16801598|ref|NP_471866.1| hypothetical protein lin2536 [Listeria innocua Clip11262]
gi|16415058|emb|CAC97763.1| lin2536 [Listeria innocua Clip11262]
Length = 189
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 20/174 (11%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
F F++L I G I +++ FS R + ++ N +++LG P P+
Sbjct: 4 FKKFFVIL---IVIGFIYVLIVAAFMFSGTRA----KPDENVNTVLILGAKINGDPATPS 56
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ +E + + Y K +I+SGG E+ V L+ G+
Sbjct: 57 LVLEERLDT---AVAYLNEYPKAK-------VIVSGGQGADESTTEAAVMEEYLVNEGIA 106
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
R+ IK ET+S T +N ++S+ K GK +I V+S YH+ R+ + + GIN
Sbjct: 107 RNRIKKETKSKRTEENIKYSNE--KFDLGKTVI-VTSDYHMYRALMLAKRQGIN 157
>gi|228958546|ref|ZP_04120266.1| hypothetical protein bthur0005_20520 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228801173|gb|EEM48070.1| hypothetical protein bthur0005_20520 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 162
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 49 VKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDL---YNV 105
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 106 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 137
>gi|71280901|ref|YP_268732.1| hypothetical protein CPS_2002 [Colwellia psychrerythraea 34H]
gi|71146641|gb|AAZ27114.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
Length = 254
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 28/250 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LL IF +V + QSI+ + +L+ +F + ++ ++ Y P
Sbjct: 20 VLLLLIFALVVHRKKPKQSIKSLSTAIVILLISAFAPFS---DTVMTAIENDY-----PP 71
Query: 61 QWKKDGNI--IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
K + ++ IV+LG G +P + + S R+ E +R+Y Q II
Sbjct: 72 YVKTNVSVDYIVVLGCGHNTNAELP-VTSQLKTCSLQRMVEAVRIY----QLHPEARIIT 126
Query: 119 SG-GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
SG G AE++ L+ GV I E DT + AQ + +QG +I
Sbjct: 127 SGYGGHNPVSNAETV--KQSLILLGVPAQKIITENFPKDTEEEAQL---IAPRVQGTQVI 181
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYL-------NAYYSIIPLSANFYLTELALKEY 230
LV++A H+ RS YFQ GI A+ + Y ++ IP S T +A E
Sbjct: 182 LVTNADHMPRSINYFQAEGIYPIAAPTGYWVKNPDSSKSWVHYIPTSKKLEQTTIAWYES 241
Query: 231 IGILIAYYRG 240
+G+++ +++
Sbjct: 242 LGLIVQWFKS 251
>gi|182417046|ref|ZP_02948424.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237668527|ref|ZP_04528511.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182379055|gb|EDT76559.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237656875|gb|EEP54431.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 273
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
EPS R+ + K ++ H I++SGG ++E+ L+ G+
Sbjct: 129 EPSLTLSGRLDAAIEY---IKDYNNHSKIVVSGGKGNDEKISEAEAMKKYLVSKGMPEGQ 185
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGK-----NIILVSSAYHLKRSQLYFQHFGINT 199
I +E +S T++N +FS +I+ K N+ +V++ +H RS+L Q G N
Sbjct: 186 ILMENKSTTTYENFKFSKELIEEDSNKEIDEINVKVVTTDFHAFRSKLLAQKNGYNN 242
>gi|160935020|ref|ZP_02082406.1| hypothetical protein CLOLEP_03896 [Clostridium leptum DSM 753]
gi|156866473|gb|EDO59845.1| hypothetical protein CLOLEP_03896 [Clostridium leptum DSM 753]
Length = 262
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
NGT +I +PS R+ E + Y +M I SGG ++E+
Sbjct: 110 NGTVVILGCQVKGTQPSLMLTKRL-EAAKEYLDRNPEAM---CIPSGGKGNGELVSEAQA 165
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLY 191
L+E G++ + I E QS DT +N + +S I + +G K++ILVS +H R+ L
Sbjct: 166 MKAWLVEHGIDENRIYPEAQSRDTVENIR-NSKEIMDSKGLPKDMILVSDGFHQYRAGLI 224
Query: 192 FQHFGINTKA 201
Q GI A
Sbjct: 225 AQKQGIEAGA 234
>gi|302039339|ref|YP_003799661.1| hypothetical protein NIDE4067 [Candidatus Nitrospira defluvii]
gi|300607403|emb|CBK43736.1| conserved protein of unknown function DUF218 [Candidatus Nitrospira
defluvii]
Length = 270
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 20/169 (11%)
Query: 90 SFQSYSRIFETMRLYKSCK----QHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGV 143
S + + + R SC + ++ ++++GGD + GL ES + GV
Sbjct: 104 SLRPADEVSDASRQRTSCGTDLWKQNLAPKLLLTGGDATVFRTGLMESHEMKRWAIRLGV 163
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG-INTKAS 202
I E QS T++NA + SM+ + I+LV++AYHL R+ F+ G + T
Sbjct: 164 PESAILTEEQSRTTYENAVQTKSMLGS---GRILLVTAAYHLPRAVRLFEKQGFVVTPFP 220
Query: 203 CS---------DYLNA-YYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
C + A + +P + +T A+ E GI++ + G
Sbjct: 221 CGFESQHTPQQAWEQATLFDFLPTAKALLITSQAVDEVAGIIVYWLAGK 269
>gi|89069286|ref|ZP_01156649.1| hypothetical protein OG2516_14486 [Oceanicola granulosus HTCC2516]
gi|89045162|gb|EAR51230.1| hypothetical protein OG2516_14486 [Oceanicola granulosus HTCC2516]
Length = 156
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS R LY H+ ++I G +HG E+ V LL +GV I
Sbjct: 16 PSPTLRRRTLHAAGLY-----HAGRGRLLIPCGGQGRHGPPEAEVMRALLLGAGVPDAAI 70
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
E +S T++N F+ ++ +++V+ YH+ R++L + G L
Sbjct: 71 LQERRSTSTWENLLFARPLLAAQGETRVLIVTDRYHVPRARLAARRMG----------LT 120
Query: 209 AYYSIIPLSANFYLTEL--ALKE 229
A + PL + T+L AL+E
Sbjct: 121 AAGAPPPLRGSHVPTQLRQALRE 143
>gi|332653075|ref|ZP_08418820.1| hypothetical protein HMPREF0866_00773 [Ruminococcaceae bacterium
D16]
gi|332518221|gb|EGJ47824.1| hypothetical protein HMPREF0866_00773 [Ruminococcaceae bacterium
D16]
Length = 205
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK----N 170
T+++SGG +E+ + L E GV+ D I LE +S +T +N +S +++ +
Sbjct: 84 TVVVSGGQGSNEPTSEAACMADYLEEHGVDPDQILLEDKSSNTKENLIYSRELLEEQGVD 143
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE-LAL 227
+ +++VS+ +HL RS++ + FG ++ L A + IP Y+ E LAL
Sbjct: 144 VGEGGVLVVSNGFHLTRSRMLAERFGYGHVST----LAAPTTHIPSRIQMYIREPLAL 197
>gi|291458721|ref|ZP_06598111.1| putative membrane protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291418638|gb|EFE92357.1| putative membrane protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 382
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCT 115
L P+ ++D + IV+LG G P + SRI +RL Y++ +
Sbjct: 187 LFHPRKRRDLDYIVVLGAGIRGEAVTPLL--------ASRIERGIRLLYENPR-----AL 233
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG + + E L GV+ I E +SL+T QN FS +++ + K
Sbjct: 234 LILSGGQGEGEDIPEGEAMRRYALSQGVDPGRILTEEKSLNTRQNLLFSRALMGGEKPK- 292
Query: 176 IILVSSAYHLKRSQL 190
I +V+++YH+ R+ L
Sbjct: 293 IAVVTTSYHVFRALL 307
>gi|212634481|ref|YP_002311006.1| hypothetical protein swp_1641 [Shewanella piezotolerans WP3]
gi|212555965|gb|ACJ28419.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
Length = 280
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
G ++++LG+G + PA++ + S +R+ E +R + C +++SG
Sbjct: 111 GCLVMVLGSGHDEVENQPAVQ-QLSNTGLARLSEGIRQLSLGQD----CQLVVSGWSGGL 165
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ A + V + +E GV + I + DT + AQF + + + LV+SA H+
Sbjct: 166 NTRAHADVMFDAAVELGVNPNAIIKFPLAKDTIEEAQFMQWEVADAPFR---LVTSASHM 222
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYL-TELALKEYIGIL 234
RS F++ G+N A+ +D+ A L ++ A+ EY+G+L
Sbjct: 223 PRSMAIFENSGLNATAAPTDFAQRKTYWWYFDAQSLLSSQRAIHEYLGLL 272
>gi|327386938|gb|AEA58412.1| hypothetical protein LCBD_2918 [Lactobacillus casei BD-II]
Length = 360
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
P +++P+ + I K+ K++ I+++GG P+ + L E+ V L+ G
Sbjct: 196 PNGKMQPTMKKRLEI-----ALKAAKKYP-KSKILVAGGVPE-NKLTEATVMQKWLVAHG 248
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ + I+LE S +T +NA FS + N + + L++SA H++R+ L +Q G
Sbjct: 249 IAKKRIELEDLSTNTVENALFSVRELVNREATSATLITSATHMRRAFLLYQMAG 302
>gi|228920990|ref|ZP_04084327.1| hypothetical protein bthur0011_20010 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228838684|gb|EEM83988.1| hypothetical protein bthur0011_20010 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 162
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS +
Sbjct: 49 SKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDLY---NV 105
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 106 KHAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 137
>gi|134103151|ref|YP_001108812.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338]
gi|133915774|emb|CAM05887.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338]
Length = 196
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+I G P G +E +V + L+ GV +D+ L+ +DT +A+ ++ + + I
Sbjct: 82 LIVSGSPHSRGYSEPVVMRDYLVARGVPPEDVLLDESGVDTCSSARAAA---RTFGLRAI 138
Query: 177 ILVSSAYHLKRSQLYFQHFGINT 199
+V++ +HL+RS F+ GI+T
Sbjct: 139 TVVTTNFHLRRSVALFRRAGIDT 161
>gi|256390075|ref|YP_003111639.1| hypothetical protein Caci_0865 [Catenulispora acidiphila DSM 44928]
gi|256356301|gb|ACU69798.1| protein of unknown function DUF218 [Catenulispora acidiphila DSM
44928]
Length = 350
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQG 173
+I+SGG L+E+ N L+E+G D I E QS T +N +S+++++ +G
Sbjct: 217 LIVSGGKGSDERLSEAEAMENYLVEAGFPADRILKEDQSSTTEENLLYSAALMRENRPEG 276
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
++V++ +H R+ L + + + S +A ++L ++E+I +
Sbjct: 277 YRCVVVTNDFHSYRAALIARDLDVPAQVVGSP-----------TAAYFLPSATIREFIAV 325
Query: 234 LIAYYRGN 241
+ Y++ N
Sbjct: 326 FVRYWKWN 333
>gi|28871924|ref|NP_794543.1| hypothetical protein PSPTO_4809 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28855177|gb|AAO58238.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 256
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 107/252 (42%), Gaps = 31/252 (12%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWK- 63
+ LI+ +W + R +CF + +P ++ + RPL QW
Sbjct: 19 LLLILGWW---LRRSRPRLATACFAAGLGGLWLMSVPVVVEFAARKMEQIRPLPQQQWAT 75
Query: 64 --KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI---FETMRLYKSCKQHSMHCTIII 118
+ + IV+LGNG R P++ + + E +RL + S I+
Sbjct: 76 LAQQADAIVVLGNGRE--------RNSPTWGADTPTGLGLERLRLAARLAKES-GLPILT 126
Query: 119 SGGDPQKHGLAESIVYNNKLLES-GVERDDIKL-ETQSLDTFQNAQFSSSMIKNMQGKNI 176
+GG +E+ + L + GV ++ E S T++NA ++++++ K +
Sbjct: 127 AGGLHFDQPPSEASIMAQALQQDFGV---TVRWQEGLSRTTWENATMTAAVLQPQGIKRV 183
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYI 231
+LV+ A+H+ R++ F+ G ++ +L + +P S F + + L E
Sbjct: 184 VLVTQAWHMSRARWSFEQAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAA 243
Query: 232 GILI--AYYRGN 241
G+L+ YRG
Sbjct: 244 GLLVYPWIYRGG 255
>gi|238749759|ref|ZP_04611264.1| hypothetical protein yrohd0001_30790 [Yersinia rohdei ATCC 43380]
gi|238712414|gb|EEQ04627.1| hypothetical protein yrohd0001_30790 [Yersinia rohdei ATCC 43380]
Length = 255
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 19/182 (10%)
Query: 69 IVLLGNGTTIIPT-IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T P P+ + S R+ E +RLY++ H + G P
Sbjct: 82 IVVLGGGYTFNPNWAPSANL--FANSLPRVTEGIRLYRA---HPNAKLVFTGGAAPHNQS 136
Query: 128 LAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
A++ ++ ES GV +DI Q DT + A ++++ + K +LV+SA HL
Sbjct: 137 SAKTAA---QVAESLGVPAEDIIALDQPKDTIEEAAAVANLVGD---KPFLLVTSANHLP 190
Query: 187 RSQLYFQHFGIN------TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ +F G+N + + + L ++ IP + +E + E +G++
Sbjct: 191 RAMNFFVAKGLNPIPAPANQLAITTPLQSWERAIPAAVYLGHSERSWYETLGLMWQKLTA 250
Query: 241 NR 242
N+
Sbjct: 251 NK 252
>gi|254455840|ref|ZP_05069269.1| conserved hypothetical protein [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082842|gb|EDZ60268.1| conserved hypothetical protein [Candidatus Pelagibacter sp.
HTCC7211]
Length = 228
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
I+ L+ +L+ YQ L P + + IV+L I + + E ++ RIF
Sbjct: 30 IVSDKLVAYLESDYQ--LSKPSNIEPADSIVVLSGMIRTINSKDGLDYEFG-EASDRIFA 86
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+ L+K K + I+ G P G+ E + +G+ ++I L +T Q
Sbjct: 87 GINLFKEKKAPKL---ILTRGKLPWSVGIPEGEYLKEIAINNGISENNILLTENVENTDQ 143
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSII 214
A+ ++ + K ++LV+SA+H+ R+Q F+ GIN D+ + S I
Sbjct: 144 EAKAIKKLLSEDKSK-VLLVTSAFHMPRAQKVFEAAGINVVPFPVDFQKGLSKITFMSFI 202
Query: 215 PLSANFYLTELALKEYIG 232
P + T ++E IG
Sbjct: 203 PSANALSGTSFFVREMIG 220
>gi|229494703|ref|ZP_04388461.1| integral membrane protein [Rhodococcus erythropolis SK121]
gi|229318370|gb|EEN84233.1| integral membrane protein [Rhodococcus erythropolis SK121]
Length = 336
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/224 (18%), Positives = 100/224 (44%), Gaps = 27/224 (12%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
LL Q + F L+ S++G+ + + LL + Q+ ++ + IV+ G
Sbjct: 113 LLTQRYWLAVVLGSFSLVASYLGF-LFTSFLLYSYVYGRQK------YQPGMDAIVVHGA 165
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + P + SR+ + ++++ + +++SGG ++E+
Sbjct: 166 GLSGADVTPLLA--------SRLDKAADVFRAEVREGRSPLLVVSGGKGSDEVVSEAEAM 217
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NMQGKNIILVSSAYHLKRSQLYFQ 193
L++ G+ R+ + LE +S T +N +++ +++ N ++LV+S +H+ R+ + +
Sbjct: 218 CVYLVDHGIPRESVILEDRSTTTLENLEYTRDLLRANTTKPRMVLVTSNFHILRTATFAR 277
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ + S +A +YL L+E+ + + +
Sbjct: 278 SLDLDAEVIGSH-----------TARYYLPSAILREFAAVTVEH 310
>gi|293604449|ref|ZP_06686856.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292817326|gb|EFF76400.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 254
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 92/229 (40%), Gaps = 16/229 (6%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+RK L + W + T L + P L+P + IV+LG T
Sbjct: 32 LRKTGAAIIAAGLLWALAWSLPVTSLWLGGALENRYPHLAPADSPTADAIVVLGGNT--- 88
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQH--SMHCTIIISGGDPQKHGLAESIVYNNK 137
A F Y + +R+ + + + +++SGG + ++E+ +
Sbjct: 89 ----ANGRANWFLPYDKDTAVVRVDTAAQLYLAGRAPKVLLSGGALEGD-VSEARGMAHA 143
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+ + GV + LE S T++NA + +K+ ++LV+SA H+ R+ F G+
Sbjct: 144 IRQQGVPESALILENSSRTTYENAALTEDALKSRGITKVLLVTSALHMPRAMAAFSKQGV 203
Query: 198 NTKAS------CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
A+ + + +P F + +KEY G+ + + RG
Sbjct: 204 EAIAAPAPPQIVAPADGSLSPWVPDQRTFDASRSIIKEYAGLFVYWLRG 252
>gi|307702098|ref|ZP_07639105.1| integral membrane protein [Streptococcus mitis NCTC 12261]
gi|307707431|ref|ZP_07643913.1| integral membrane protein [Streptococcus mitis NCTC 12261]
gi|307616383|gb|EFN95574.1| integral membrane protein [Streptococcus mitis NCTC 12261]
gi|307616585|gb|EFN95775.1| integral membrane protein [Streptococcus mitis NCTC 12261]
Length = 339
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
S F+ F+F+G+ ++ +IL L P+ KK + I++ G G + +
Sbjct: 135 SYFIFGFAFVGF-MLYSILY----------LFIPK-KKHYDFIIIHGAGL-----LDGEK 177
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL-ESGVER 145
+ P + RI + + Y + K H II SGG ++E+ N LL E+ V +
Sbjct: 178 VTPLLKR--RIDKAVEAYHNSKNP--HIKIIASGGQGGDEKISEAQAITNYLLEETDVPQ 233
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKA-SC 203
D I LE QS T++N FS + + + K + V++ YH+ R+ Y + + C
Sbjct: 234 DGIILEDQSRTTYENLLFSKELGEKLVAKPQFLFVTNDYHVFRTSTYARKLKMKGDGLGC 293
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+A +Y+ ++EY+ + +
Sbjct: 294 R------------TAGYYIPSAFIREYVALCV 313
>gi|313500771|gb|ADR62137.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 253
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 85/193 (44%), Gaps = 26/193 (13%)
Query: 56 PLLSPQWK---KDGNIIVLLGNGTTIIPTIPAIRIEPSF----QSYSRIFETMRLYKSCK 108
PL W + + IV+LG G R +P++ Q + E MR
Sbjct: 67 PLAVSDWAGLARRADAIVVLGAGRE--------RGDPAWGGGDQPTATALERMRFAARLA 118
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKL-ETQSLDTFQNAQFSSS 166
+ S ++ SGG +E+ + +L E VE +K E S T++NAQ ++
Sbjct: 119 KAS-GLPVLTSGGLHYGTPPSEARLMAERLHEDFAVE---VKWREEASRTTWENAQLTAK 174
Query: 167 MIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS-----CSDYLNAYYSIIPLSANFY 221
+++ + + ++LV+ A+H++RS+ F+ G + D+ + ++P S +
Sbjct: 175 VLQPLGFRRVVLVTQAWHMQRSRWSFEQAGFEVVPAPVGFLGRDHARPFGGLLPESRAMW 234
Query: 222 LTELALKEYIGIL 234
+ E +G++
Sbjct: 235 QSGQLFNEVVGLM 247
>gi|307687370|ref|ZP_07629816.1| hypothetical protein Ccel74_04393 [Clostridium cellulovorans 743B]
Length = 254
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 22/146 (15%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIISGGDPQKH 126
+V+LG G + RI S Q +RL + + HS+H II+SGG
Sbjct: 105 VVVLGAG------LIGDRISTSLQ--------LRLDAALEFHSIHPEIPIIVSGGQGPDE 150
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---IILVSSAY 183
L+E+ + L+E G++ + I +E +S T++N FS +I N K + ++++ +
Sbjct: 151 LLSEARAMKDYLIEKGIDPNLITMEDKSTSTYENFMFSKELISNKCSKTPIKVTVITNNF 210
Query: 184 HLKRSQLYFQHFGINT---KASCSDY 206
H R+ + + G SC Y
Sbjct: 211 HQFRANMIAKAQGFEVHGYPGSCHPY 236
>gi|261211840|ref|ZP_05926127.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC341]
gi|260839190|gb|EEX65822.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC341]
Length = 273
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 39/227 (17%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTII 79
C ++LFS G + + T LL L+ +Y L +G + +++LGNG +
Sbjct: 38 GCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL-----PVEGTLDYVMVLGNGHVVD 92
Query: 80 PTIPAIRIEPSFQSYSRIFETMR---LYKSCKQHSMHCTIIISG---GDPQKHGLAESIV 133
IP E + + R+ E +R +Y K +I+SG G H + V
Sbjct: 93 DDIPPTS-ELTRAALMRLTEGIRISRMYPGSK-------LILSGYAGGSEVSHARMMARV 144
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L GV + DI L + DT++ A+ +++ + Q K ++LV+SA H+KR+ F+
Sbjct: 145 A----LALGVPKSDIILLETAKDTWEEARQAAAFV---QQKRMVLVTSASHMKRAMREFE 197
Query: 194 HFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGIL 234
G+ + ++YL + IP S TE E +G+L
Sbjct: 198 SAGLTPIPAPTNYLGHLNIVQPWDKYIPKSRYLEQTEQYWYETLGLL 244
>gi|226309357|ref|YP_002769317.1| hypothetical protein RER_58700 [Rhodococcus erythropolis PR4]
gi|226188474|dbj|BAH36578.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length = 336
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/224 (18%), Positives = 101/224 (45%), Gaps = 27/224 (12%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
LL Q + F L+ S++G+ + + LL + Q+ ++ + IV+ G
Sbjct: 113 LLTQRYWLAVVLGSFSLVASYLGF-LFTSFLLYSYVYGRQK------YQPGMDAIVVHGA 165
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + P + SR+ + ++++ + +++SGG ++E+
Sbjct: 166 GLSGADVTPLLA--------SRLDKAADIFRAEVREGRSPLLVVSGGKGSDEVVSEAEAM 217
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQ 193
L++ G+ R+++ LE +S T +N +++ +++ K ++LV+S +H+ R+ + +
Sbjct: 218 CVYLVDHGIPRENVMLEDRSTTTLENLEYTRDLLRADTTKPRMVLVTSNFHILRTATFAR 277
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ + S +A +YL L+E+ + + +
Sbjct: 278 SLDLDAEVIGSH-----------TARYYLPSAILREFAAVTVEH 310
>gi|217969248|ref|YP_002354482.1| hypothetical protein Tmz1t_0817 [Thauera sp. MZ1T]
gi|217506575|gb|ACK53586.1| protein of unknown function DUF218 [Thauera sp. MZ1T]
Length = 259
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 24/190 (12%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSF--QSYSRI-FETMRLYKSCKQHSMHCTIIISG 120
++ IV+LG G P F ++ +R+ E +R Y + +++SG
Sbjct: 83 REAQAIVVLGAGKRTH--------APEFGGETVNRLALERLR-YAAALARETRLPVLVSG 133
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P G LL +E+ S DT +NA+FS+ ++ K I+LV+
Sbjct: 134 GAPA--GDTPEAYLMEALLRDEYGVPPRWVESASRDTRENARFSAVHLQAAGVKRILLVT 191
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYS--------IIPLSANFYLTELALKEYIG 232
A H++R++ F+ G++ + + +L S P Y AL E +G
Sbjct: 192 HAMHMERARPEFEAAGLDVIPAPTAWLGGGDSPGDAQPLPFAPSQNTAYAAWFALHELLG 251
Query: 233 ILIAYYRGNR 242
L YR +R
Sbjct: 252 RLA--YRWSR 259
>gi|302876695|ref|YP_003845328.1| hypothetical protein Clocel_3898 [Clostridium cellulovorans 743B]
gi|302579552|gb|ADL53564.1| protein of unknown function DUF218 [Clostridium cellulovorans 743B]
Length = 257
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 22/146 (15%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIISGGDPQKH 126
+V+LG G + RI S Q +RL + + HS+H II+SGG
Sbjct: 105 VVVLGAG------LIGDRISTSLQ--------LRLDAALEFHSIHPEIPIIVSGGQGPDE 150
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---IILVSSAY 183
L+E+ + L+E G++ + I +E +S T++N FS +I N K + ++++ +
Sbjct: 151 LLSEARAMKDYLIEKGIDPNLITMEDKSTSTYENFMFSKELISNKCSKTPIKVTVITNNF 210
Query: 184 HLKRSQLYFQHFGINT---KASCSDY 206
H R+ + + G SC Y
Sbjct: 211 HQFRANMIAKAQGFEVHGYPGSCHPY 236
>gi|70732742|ref|YP_262505.1| hypothetical protein PFL_5437 [Pseudomonas fluorescens Pf-5]
gi|68347041|gb|AAY94647.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 253
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Query: 56 PLLSPQWK---KDGNIIVLLGNGTTIIPTIPAIRIEPSF---QSYSRIFETMRLYKSCKQ 109
PL QW + ++IV+LG+G R +P++ Q E R Y S
Sbjct: 67 PLPQSQWASLAEQADVIVVLGSGRE--------RGDPAWGSDQPTGVGLERER-YASRLA 117
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL-----ETQSLDTFQNAQFS 164
+ ++ SGG E+ + LL DD + E +S T++NAQFS
Sbjct: 118 KASGLPVLTSGGLHYGTPPTEAALMAQSLL------DDFGVTVRWQEGRSRTTWENAQFS 171
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
+ ++ + K +++V+ A+H+ RS F+H G + +L
Sbjct: 172 AEVLLPLGIKRVVVVTQAWHMPRSVWSFEHAGFEVVPAPVGFLG 215
>gi|291003905|ref|ZP_06561878.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338]
Length = 189
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+I G P G +E +V + L+ GV +D+ L+ +DT +A+ ++ + + I
Sbjct: 75 LIVSGSPHSRGYSEPVVMRDYLVARGVPPEDVLLDESGVDTCSSARAAA---RTFGLRAI 131
Query: 177 ILVSSAYHLKRSQLYFQHFGINT 199
+V++ +HL+RS F+ GI+T
Sbjct: 132 TVVTTNFHLRRSVALFRRAGIDT 154
>gi|196232487|ref|ZP_03131340.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
gi|196223559|gb|EDY18076.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
Length = 193
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS + +R+ T+ Y++ II+SGG K G E+IV + L+ G+ + I
Sbjct: 56 PSTRLRARLDRTLECYRA----GYFPEIIVSGG-IGKEGYDEAIVMRDYLVAHGLPGEHI 110
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
L+ + + TF +A+ + + + ++ ++S +HL R++L FG T
Sbjct: 111 LLDNKGVTTFASARNTRDIAQQRNFHSVFVISQYFHLPRARLALHRFGFTT 161
>gi|327331177|gb|EGE72917.1| hypothetical protein HMPREF9344_01832 [Propionibacterium acnes
HL097PA1]
Length = 349
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 64/155 (41%), Gaps = 26/155 (16%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
SR+ + +++ + H II SGG AE L+E G+ R+ + +E Q+
Sbjct: 180 SRLDRGIGQWRTDRDAGFHSVIIPSGGKGDDEPRAEGEAMAEYLVEHGIPRECVVVENQA 239
Query: 155 LDTFQNAQFSSSMI---------------KNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+T +N S ++ + Q +++ +S+YH R+ + G+
Sbjct: 240 ANTDENISLSRQVMPTQVRSVPSRRAEAARERQNPQVVVATSSYHAVRAAELCRRQGLRV 299
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + +A ++L L+EYI +L
Sbjct: 300 RVLGAP-----------TATYFLPSAMLREYIALL 323
>gi|317407644|gb|EFV87583.1| hypothetical protein HMPREF0005_04608 [Achromobacter xylosoxidans
C54]
Length = 254
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 22/232 (9%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+RK L + W + T L + P L P + IV+LG T
Sbjct: 32 LRKTGGALILAGLLWALAWSLPVTSLWLGGALENRYPHLPPAESPTADAIVVLGGNT--- 88
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQH--SMHCTIIISGGDPQKHGLAESIVYNNK 137
A F Y + +R+ + + + +++SGG + ++E+ +
Sbjct: 89 ----ANGRANWFLPYDKDTAVVRVDTAAQLYLAGRAPKVVLSGGALEGD-VSEARGMAHA 143
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+ + GV + LE S T++NA + +K ++LV+SA H+ R+ F G+
Sbjct: 144 IRQQGVPESALILENASRTTYENAALTEDQLKTRGIGKVLLVTSALHMPRAMAAFSKQGV 203
Query: 198 ---------NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
A LN + +P F + +KEY G+ + + RG
Sbjct: 204 IAIAAPAPPQIVAPADGSLNPW---LPDQRTFDASRSIIKEYAGLFVYWLRG 252
>gi|226365146|ref|YP_002782929.1| hypothetical protein ROP_57370 [Rhodococcus opacus B4]
gi|226243636|dbj|BAH53984.1| hypothetical protein [Rhodococcus opacus B4]
Length = 280
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 102 RLYKSCKQH--SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL + Q S II++GG+PQ +G+ E+ L GV D I E ++ T
Sbjct: 140 RLQAAMVQSWVSPMSPIIVTGGNPQ-NGITEAAAMEGWLRSHGVPADRIHPEHRAGSTVG 198
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
NA S + +++ ILV+SA H++R+ + F G+ + S +A
Sbjct: 199 NALNSVPLARSLGAGGAILVTSANHIRRATVDFNVAGLPVVGAMSAVTSA 248
>gi|50842156|ref|YP_055383.1| hypothetical protein PPA0669 [Propionibacterium acnes KPA171202]
gi|289426845|ref|ZP_06428571.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|295130244|ref|YP_003580907.1| hypothetical protein HMPREF0675_3738 [Propionibacterium acnes
SK137]
gi|50839758|gb|AAT82425.1| hypothetical protein PPA0669 [Propionibacterium acnes KPA171202]
gi|289159934|gb|EFD08112.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|291375530|gb|ADD99384.1| conserved hypothetical protein [Propionibacterium acnes SK137]
gi|313763888|gb|EFS35252.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
gi|313771407|gb|EFS37373.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
gi|313808239|gb|EFS46713.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
gi|313811298|gb|EFS49012.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
gi|313814824|gb|EFS52538.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
gi|313819005|gb|EFS56719.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
gi|313820836|gb|EFS58550.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
gi|313822403|gb|EFS60117.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
gi|313825802|gb|EFS63516.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
gi|313828147|gb|EFS65861.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
gi|313830950|gb|EFS68664.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
gi|313833376|gb|EFS71090.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
gi|314915093|gb|EFS78924.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
gi|314918753|gb|EFS82584.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
gi|314920554|gb|EFS84385.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
gi|314925593|gb|EFS89424.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
gi|314932228|gb|EFS96059.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
gi|314954656|gb|EFS99062.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
gi|314958523|gb|EFT02625.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
gi|314959880|gb|EFT03982.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
gi|314968297|gb|EFT12396.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
gi|314973834|gb|EFT17930.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
gi|314976488|gb|EFT20583.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
gi|314979234|gb|EFT23328.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
gi|314983400|gb|EFT27492.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
gi|314986818|gb|EFT30910.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
gi|314989379|gb|EFT33470.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
gi|315080102|gb|EFT52078.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
gi|315083984|gb|EFT55960.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
gi|315085185|gb|EFT57161.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
gi|315089022|gb|EFT60998.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
gi|315096455|gb|EFT68431.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
gi|315099022|gb|EFT70998.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
gi|315100897|gb|EFT72873.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
gi|315107172|gb|EFT79148.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
gi|315108116|gb|EFT80092.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
gi|327326860|gb|EGE68643.1| hypothetical protein HMPREF9338_01734 [Propionibacterium acnes
HL096PA2]
gi|327442936|gb|EGE89590.1| hypothetical protein HMPREF9570_02441 [Propionibacterium acnes
HL043PA1]
gi|327445060|gb|EGE91714.1| hypothetical protein HMPREF9571_02045 [Propionibacterium acnes
HL043PA2]
gi|327447433|gb|EGE94087.1| hypothetical protein HMPREF9568_00729 [Propionibacterium acnes
HL013PA2]
gi|327450039|gb|EGE96693.1| hypothetical protein HMPREF9581_02486 [Propionibacterium acnes
HL087PA3]
gi|327455410|gb|EGF02065.1| hypothetical protein HMPREF9586_01447 [Propionibacterium acnes
HL083PA2]
gi|328752707|gb|EGF66323.1| hypothetical protein HMPREF9579_02249 [Propionibacterium acnes
HL087PA1]
gi|328752927|gb|EGF66543.1| hypothetical protein HMPREF9563_02180 [Propionibacterium acnes
HL020PA1]
gi|328759376|gb|EGF72992.1| hypothetical protein HMPREF9588_00221 [Propionibacterium acnes
HL025PA2]
gi|328760301|gb|EGF73872.1| hypothetical protein HMPREF9343_01965 [Propionibacterium acnes
HL099PA1]
gi|332675082|gb|AEE71898.1| hypothetical protein PAZ_c07120 [Propionibacterium acnes 266]
Length = 349
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 64/155 (41%), Gaps = 26/155 (16%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
SR+ + +++ + H II SGG AE L+E G+ R+ + +E Q+
Sbjct: 180 SRLDRGIGQWRTDRDAGFHSVIIPSGGKGDDEPRAEGEAMAEYLVEHGIPRECVVVENQA 239
Query: 155 LDTFQNAQFSSSMI---------------KNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+T +N S ++ + Q +++ +S+YH R+ + G+
Sbjct: 240 ANTDENISLSRQVMPTQVRSVPSRRAEAARQRQNPQVVVATSSYHAVRAAELCRRQGLRV 299
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + +A ++L L+EYI +L
Sbjct: 300 RVLGAP-----------TATYFLPSAMLREYIALL 323
>gi|327330943|gb|EGE72687.1| hypothetical protein HMPREF9337_01510 [Propionibacterium acnes
HL096PA3]
Length = 349
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 64/155 (41%), Gaps = 26/155 (16%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
SR+ + +++ + H II SGG AE L+E G+ R+ + +E Q+
Sbjct: 180 SRLDRGIGQWRTDRDAGFHSVIIPSGGKGDDEPRAEGEAMAEYLVEHGIPRECVVVENQA 239
Query: 155 LDTFQNAQFSSSMI---------------KNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+T +N S ++ + Q +++ +S+YH R+ + G+
Sbjct: 240 ANTDENISLSRQVMPTQVRSVPSRRAEAARQRQNPQVVVATSSYHAVRAAELCRRQGLRV 299
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + +A ++L L+EYI +L
Sbjct: 300 RVLGAP-----------TATYFLPSAMLREYIALL 323
>gi|163857424|ref|YP_001631722.1| hypothetical protein Bpet3112 [Bordetella petrii DSM 12804]
gi|163261152|emb|CAP43454.1| conserved hypothetical protein [Bordetella petrii]
Length = 252
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 91 FQSYSRIFETMRLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
F Y + +R+ + K + H +++SGG + ++E+ + + GV D +
Sbjct: 94 FLPYDKETAVVRVDTAIKLYQAHRAPKVVLSGGA-LEGDVSEARGMAFLMKQQGVPEDAL 152
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD--- 205
LE S T++NA + +K I+LV+SA H+ R+ F G+ + +
Sbjct: 153 LLENSSRTTYENAMLTEEELKEHGFGKILLVTSALHMPRAMAAFSKQGVAAIPASTPPQI 212
Query: 206 YLNAYYSIIPLSANFYLTELA---LKEYIGILIAYYRG 240
L S+ P + + + +KEY G+L+ + RG
Sbjct: 213 VLPPDGSVSPWLPHMRTLDASRSIIKEYAGLLVYWLRG 250
>gi|289426184|ref|ZP_06427930.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|289153349|gb|EFD02064.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|313791546|gb|EFS39664.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
gi|313802367|gb|EFS43593.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
gi|313812480|gb|EFS50194.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
gi|313838950|gb|EFS76664.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
gi|314962443|gb|EFT06544.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
gi|315077359|gb|EFT49419.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
gi|327455232|gb|EGF01887.1| hypothetical protein HMPREF9584_01188 [Propionibacterium acnes
HL092PA1]
Length = 349
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 64/155 (41%), Gaps = 26/155 (16%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
SR+ + +++ + H II SGG AE L+E G+ R+ + +E Q+
Sbjct: 180 SRLDRGIGQWRTDRDAGFHSVIIPSGGKGDDEPRAEGEAMAEYLVEHGIPRECVVVENQA 239
Query: 155 LDTFQNAQFSSSMI---------------KNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+T +N S ++ + Q +++ +S+YH R+ + G+
Sbjct: 240 ANTDENISLSRQVMPTQVRSVPSRRAEAARQRQNPQVVVATSSYHAVRAAELCRRQGLRV 299
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + +A ++L L+EYI +L
Sbjct: 300 RVLGAP-----------TATYFLPSAMLREYIALL 323
>gi|261252465|ref|ZP_05945038.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio orientalis CIP 102891]
gi|260935856|gb|EEX91845.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio orientalis CIP 102891]
Length = 267
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 37/195 (18%)
Query: 28 CFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIP 80
CF++LFSFIG + + + LL L+ Y S + D +I +++LG+G +
Sbjct: 39 CFVVLFSFIGIFLIAFQPVSSRLLMPLERQY-----SAFFPVDESIDYVMVLGSGHVVDD 93
Query: 81 TIPAIRIEPSFQSYSRIFE---TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
IP E S R+ E MR+Y K +I+SG G +E V N +
Sbjct: 94 KIPPTS-ELSRTGLMRLAEGIRVMRIYPGSK-------LILSG----YAGGSE--VSNAR 139
Query: 138 LLES-----GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
++ GV + DI L + DT++ A+ +++ + K +++V+SA H+KR+ F
Sbjct: 140 MMAKVALSLGVSKSDIILLETAKDTWEEARQAAAFVTT---KKLVVVTSASHMKRALNEF 196
Query: 193 QHFGINTKASCSDYL 207
G++ + ++YL
Sbjct: 197 HSAGMDPYPAPTNYL 211
>gi|260772652|ref|ZP_05881568.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio metschnikovii CIP 69.14]
gi|260611791|gb|EEX36994.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio metschnikovii CIP 69.14]
Length = 268
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 25/179 (13%)
Query: 67 NIIVLLGNGTTIIPTIPAIR--IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG---G 121
+ +++LGNG + +IP + S MR+Y K +I+SG G
Sbjct: 80 DYVMVLGNGHVVDDSIPPTSELTRAALMRLSEGIRVMRMYPGAK-------LILSGYAGG 132
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
H + V L GV + DI L + DT++ A+ +++ + Q + ++LV+S
Sbjct: 133 SEMSHARMLAKVA----LALGVAKSDIILLETAQDTWEEARQAAAFV---QQRTLVLVTS 185
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGIL 234
A H+ R+ FQ G+ + ++YL A+ IP + TE E +G++
Sbjct: 186 ASHMPRAMNEFQSAGLTPIPAPTNYLAQTNISQAWDKYIPRALYLEQTERYWYETMGLI 244
>gi|229017592|ref|ZP_04174486.1| hypothetical protein bcere0030_21400 [Bacillus cereus AH1273]
gi|229023809|ref|ZP_04180294.1| hypothetical protein bcere0029_21380 [Bacillus cereus AH1272]
gi|228737494|gb|EEL88004.1| hypothetical protein bcere0029_21380 [Bacillus cereus AH1272]
gi|228743661|gb|EEL93767.1| hypothetical protein bcere0030_21400 [Bacillus cereus AH1273]
Length = 166
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E +S +T++N +FS +
Sbjct: 53 VKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILMEDRSTNTYENLKFSMDLF---DV 109
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 110 KHAVVVSNTYHLYRTKIIARRLGMKMEALAAE 141
>gi|158321219|ref|YP_001513726.1| hypothetical protein Clos_2195 [Alkaliphilus oremlandii OhILAs]
gi|158141418|gb|ABW19730.1| protein of unknown function DUF218 [Alkaliphilus oremlandii OhILAs]
Length = 191
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS R+ +T+ LY TII+SG + E++ L+ +GV
Sbjct: 51 KPSPMLQYRLEKTLTLY----NEGFADTIIVSGARGDDELITEALAMKIYLMNNGVPESA 106
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN-TKASCSDY 206
I E S T++N +S++++K K+ I+VS+++H+ R+ + + ++ + A+ +Y
Sbjct: 107 ILEEDHSYSTYENLSYSNAIMKEKDLKSAIIVSNSFHMSRALMIAKRLDMSASGAAAKNY 166
Query: 207 LNAYYSIIPLSANFYLTEL 225
N + L+ +Y+ E+
Sbjct: 167 PNIF-----LTTKYYIREV 180
>gi|152993138|ref|YP_001358859.1| hypothetical protein SUN_1551 [Sulfurovum sp. NBC37-1]
gi|151424999|dbj|BAF72502.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 248
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 14/181 (7%)
Query: 65 DGNIIVLLGNGTTIIPTIP-AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ I +LG IP + ++PS +R+ E + LYK K M G D
Sbjct: 77 NAGYIHVLGTAHVAREGIPLSSELDPS--GLARVTEGVLLYKQHK--GMKLVFSGYGKDE 132
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
S L GV +DI + DT + A S M QGK+++LV+SA
Sbjct: 133 PLSNAKCSAALAQAL---GVREEDIIVFETPKDTLEEAGAMSEM---AQGKHVVLVTSAS 186
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSI---IPLSANFYLTELALKEYIGILIAYYRG 240
H+ R+ F+ GI + +D+ +P + +E A EY+G+L + +G
Sbjct: 187 HMLRASRLFKKAGIKVIEAPTDFKVKKPDDLLQLPGAEGLRRSETAFHEYLGLLWFWLKG 246
Query: 241 N 241
+
Sbjct: 247 D 247
>gi|229085219|ref|ZP_04217462.1| hypothetical protein bcere0022_18350 [Bacillus cereus Rock3-44]
gi|228698086|gb|EEL50828.1| hypothetical protein bcere0022_18350 [Bacillus cereus Rock3-44]
Length = 185
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L++ G+E I +E +S T++N +FS +
Sbjct: 72 AKVIVSGGQGEDEDIPEAHSMRNYLIQHGIEEGRIFIEDRSTSTYENLKFSMDLY---HV 128
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKA 201
K+ ++VS+ YHL R+++ + G+ ++
Sbjct: 129 KHAVVVSNTYHLYRTKIIAKRLGMQMES 156
>gi|260854211|ref|YP_003228102.1| hypothetical protein ECO26_1046 [Escherichia coli O26:H11 str.
11368]
gi|257752860|dbj|BAI24362.1| conserved predicted inner membrane protein [Escherichia coli
O26:H11 str. 11368]
gi|323157193|gb|EFZ43316.1| hypothetical protein ECEPECA14_0984 [Escherichia coli EPECa14]
Length = 259
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG+G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGDGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ E +G + + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|261256154|ref|ZP_05948687.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
FRIK966]
Length = 259
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++ LN + IP ++ E +G + + +G+
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGCIWQWLKGS 252
>gi|115372876|ref|ZP_01460181.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|310818526|ref|YP_003950884.1| hypothetical protein STAUR_1253 [Stigmatella aurantiaca DW4/3-1]
gi|115370143|gb|EAU69073.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|309391598|gb|ADO69057.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 210
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q ++ VL+ G ++P PS +R+ + + LY + ++ SG
Sbjct: 40 QQERAAPADVLVVLGARVLPGG-----VPSGALLARVEKAVALY----HQGLASRLLFSG 90
Query: 121 G---DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
G +P +E+ V + GV + LE QS T QNA+FS+ +++ + + ++
Sbjct: 91 GVGVNPP----SEAQVMRALAVRLGVPAEACFLEEQSHSTEQNARFSAQVLRALGAERVV 146
Query: 178 LVSSAYHLKRSQLYFQHFGINTKAS 202
+VS YHL R++ YF+ G S
Sbjct: 147 VVSDPYHLLRARQYFRLEGWEVATS 171
>gi|312892082|ref|ZP_07751582.1| protein of unknown function DUF218 [Mucilaginibacter paludis DSM
18603]
gi|311295454|gb|EFQ72623.1| protein of unknown function DUF218 [Mucilaginibacter paludis DSM
18603]
Length = 260
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 19/158 (12%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ---KHGLAESIVYNNKLLESGVERDDIK 149
S R +T++L K I++SGG+ Q L E+ ++ + I
Sbjct: 97 SADRFIKTLQL----KVTGRVPLILMSGGNGQLIKTSNLKEADYVFSQFKAFNIPDSCIM 152
Query: 150 LETQSLDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
+E QS +T +NA F+ ++ K + G +LV+SA+H++RS F+ GIN D++
Sbjct: 153 IENQSRNTLENAMFTKRILIDKKVPGP-YLLVTSAFHMRRSAYIFKKIGINVTPYPCDFI 211
Query: 208 NAYYSIIPLSANFYLTELAL-------KEYIGILIAYY 238
A S + LS LAL KE +G +AYY
Sbjct: 212 -AGKSAVSLSDFIIPDPLALAQWNIYIKEVVG-FVAYY 247
>gi|254992747|ref|ZP_05274937.1| hypothetical protein LmonocytoFSL_06569 [Listeria monocytogenes FSL
J2-064]
Length = 189
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 13/135 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
++ + +++LG T P +P++ ++ + + Y K +I+SGG
Sbjct: 36 ENADTVLILGAKVTGTPAVPSLVLQERLDA---AVAYLNEYPKAK-------VIVSGGQG 85
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E+ V L+ G+ R I+ ET+S T +N ++S++ K GK +I V+S Y
Sbjct: 86 ADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNA--KFNLGKTVI-VTSDY 142
Query: 184 HLKRSQLYFQHFGIN 198
H+ R+ + + GI+
Sbjct: 143 HMYRALMLAKRQGID 157
>gi|327393342|dbj|BAK10764.1| uncharacterized conserved protein YcbC [Pantoea ananatis AJ13355]
Length = 342
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 18/146 (12%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG G T P PS S R+ E +R + Q +M T +G +
Sbjct: 164 DYIVVLGGGYTYNPAW-----APSSNLLNNSLPRVTEGVRQWLRNPQATMVFTGAAAGHN 218
Query: 123 PQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ + + ++ ES GV I + Q DT Q A+ S++I + + +LV+S
Sbjct: 219 PKSNAWVAA-----QVAESLGVPDAHIHILDQPKDTEQEARAVSAVIGH---HSFLLVTS 270
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL 207
A H+ R+ +FQ G+N A+ ++ L
Sbjct: 271 ANHMPRAMRFFQQAGLNPIAAPANQL 296
>gi|228997359|ref|ZP_04156981.1| hypothetical protein bmyco0003_19410 [Bacillus mycoides Rock3-17]
gi|229004990|ref|ZP_04162717.1| hypothetical protein bmyco0002_19350 [Bacillus mycoides Rock1-4]
gi|228756338|gb|EEM05656.1| hypothetical protein bmyco0002_19350 [Bacillus mycoides Rock1-4]
gi|228762451|gb|EEM11376.1| hypothetical protein bmyco0003_19410 [Bacillus mycoides Rock3-17]
Length = 168
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG + + E+ N L++ G+E + I +E +S T++N +FS + M
Sbjct: 57 VIVSGGQGEDEDIPEAHSMRNYLIKHGIEENRIFIEDRSTSTYENLKFSMDLYHVMHA-- 114
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKA 201
++VS+ YHL R+++ + G+ ++
Sbjct: 115 -VVVSNTYHLYRTKIIAKRLGMQMES 139
>gi|228908043|ref|ZP_04071891.1| hypothetical protein bthur0013_22050 [Bacillus thuringiensis IBL
200]
gi|228851461|gb|EEM96267.1| hypothetical protein bthur0013_22050 [Bacillus thuringiensis IBL
200]
Length = 162
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ N L+ G++ I +E QS +T++N +FS + N++
Sbjct: 49 AKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDLY-NVE- 106
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+ ++VS+ YHL R+++ + G+ +A ++
Sbjct: 107 -HAVVVSNTYHLYRTKIIAKRLGMKMEALAAE 137
>gi|325965245|ref|YP_004243151.1| hypothetical protein Asphe3_39290 [Arthrobacter phenanthrenivorans
Sphe3]
gi|323471332|gb|ADX75017.1| uncharacterized conserved protein [Arthrobacter phenanthrenivorans
Sphe3]
Length = 331
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 82/182 (45%), Gaps = 27/182 (14%)
Query: 58 LSPQWKKDGNIIVLLGNGTT--IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
L P+ + + +V+LG+G +P + A R++ + LY+ ++
Sbjct: 149 LPPRRRPE--YVVVLGSGLAGNAVPPLLAARLD----------AAVSLYRGKHGGTIRA- 195
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I SGG E L E G+ I +E ++ T +N FS +++ + +
Sbjct: 196 LIPSGGRGADELTTEGAAMARYLQEQGIPAASILIEDKATTTLENLVFSRNLM-DRPDRP 254
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +V+S+YH+ R+ ++ + G+ + + +A +++ L+E+I IL+
Sbjct: 255 VTVVTSSYHVFRAAMFTRRAGMRAHVTGAR-----------TAGYFMPSAFLREFIAILV 303
Query: 236 AY 237
Y
Sbjct: 304 KY 305
>gi|225568301|ref|ZP_03777326.1| hypothetical protein CLOHYLEM_04375 [Clostridium hylemonae DSM
15053]
gi|225163020|gb|EEG75639.1| hypothetical protein CLOHYLEM_04375 [Clostridium hylemonae DSM
15053]
Length = 242
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG +AE+ + L + G++R I LE +S T +N +FS++ + +M K
Sbjct: 129 VIVSGGQGPGEDIAEAEAMADFLADCGIKRSRILLEDRSKSTEENLRFSAAYLPDMTVK- 187
Query: 176 IILVSSAYHLKRSQLYFQHFG----INTKASCSDYLNAYYSI 213
+ +VS+ +H+ R+ Y G + CS L A Y +
Sbjct: 188 VGIVSNNFHMYRACCYAGRTGYKNVCRIPSDCSPLLFANYMV 229
>gi|146311096|ref|YP_001176170.1| hypothetical protein Ent638_1439 [Enterobacter sp. 638]
gi|145317972|gb|ABP60119.1| protein of unknown function DUF218 [Enterobacter sp. 638]
Length = 259
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 34/211 (16%)
Query: 45 LLKHLQFSYQRPLLSPQW--KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIF 98
LL+ ++ Y P W KK + IV+LG G T P PS S R+
Sbjct: 62 LLRPIEDKY------PTWQGKKKVDYIVVLGGGYTWDPNW-----APSSNLINNSLPRLN 110
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDT 157
E +RL+ + M T G P K + ++ ES GV R I +LD+
Sbjct: 111 EGIRLWLANPGSKMIFT-----GAPAKTNPVSTAEAGARVAESLGVPRSAII----TLDS 161
Query: 158 FQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAY 210
++ + ++ +K G +LV+SA HL R+ ++F+H G++ + ++ LN +
Sbjct: 162 PKDTEEEAAAVKQAIGNAPFLLVTSASHLPRAMIFFEHAGLHPLPAPANQLAVDAPLNPW 221
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYRGN 241
IP ++ E +G L + +G+
Sbjct: 222 ERAIPSPVWLMHSDRVGYETLGRLWQWLKGS 252
>gi|33865854|ref|NP_897413.1| hypothetical protein SYNW1320 [Synechococcus sp. WH 8102]
gi|33633024|emb|CAE07835.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 250
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 20/225 (8%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ + + M L G++ +L + ++ YQR S + + IV+L G P
Sbjct: 30 RRHWPVVAAMSLLWIFSTGVVSQLLWRWVEHPYQR--RSVERAPLADAIVVLSGGRHPAP 87
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA-ESIVYNNKLL 139
I + R + L++S + + + G +P GL E +Y + +
Sbjct: 88 GPAQIS---EWHDPDRFLAGVALFQSGRASRL---LFTRGQNPFHPGLPPEGELYRAEAV 141
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ GV I L + +T Q A ++ Q + ++LV+SA+H++R+Q+ F+ G+
Sbjct: 142 DLGVPATSIGLTDRVTNTAQEANAIRRLLPQDQPR-VLLVTSAFHMRRAQVLFERQGLTV 200
Query: 200 KASCSDY--LNAYYSII--------PLSANFYLTELALKEYIGIL 234
D+ A+ I P S + + AL+E +G L
Sbjct: 201 LPYPVDFQARAAWAGFIWRDPLQWLPNSRSLDDSSRALRELMGRL 245
>gi|307256540|ref|ZP_07538321.1| hypothetical protein appser10_5450 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306864950|gb|EFM96852.1| hypothetical protein appser10_5450 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 252
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 24/179 (13%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI------FETMRLYKSCKQHSMHCTII 117
K IV+LG G + S + + R E MR Y + I+
Sbjct: 80 KKAQAIVVLGGG-----------VRNSHELFGRYAIAAAPLERMR-YAAYLHKQTGLPIL 127
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+GG P+ I+ L +E+ S T QNA S +M+K II
Sbjct: 128 ATGGSPEGREPEAKIMAQE--LHDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDRII 185
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY----YSIIPLSANFYLTELALKEYIG 232
LV++ +H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 186 LVTNQWHMKRTKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIG 244
>gi|333006363|gb|EGK25871.1| hypothetical protein SFVA6_1402 [Shigella flexneri VA-6]
Length = 259
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGTRVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ E +G + + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|227529308|ref|ZP_03959357.1| conserved hypothetical protein [Lactobacillus vaginalis ATCC 49540]
gi|227350736|gb|EEJ41027.1| conserved hypothetical protein [Lactobacillus vaginalis ATCC 49540]
Length = 315
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 74/144 (51%), Gaps = 15/144 (10%)
Query: 100 TMRLYKS--CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
T RL ++ C + + + TII++GG L+E+ L+ G+ +D I LE Q+++T
Sbjct: 166 TARLQQAIACWKLNHNATIIVTGGILHGEQLSEAQAMAKYLINHGIPQDRIILEEQAMNT 225
Query: 158 FQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
+ N + +++ + I++++S++H+ R+ Y + ++ S + + P
Sbjct: 226 WDNLRNCQRLLQKQADPKQKIVVITSSFHIFRTFNYLRKLKLSWPLVSS---KTPWKLQP 282
Query: 216 LSANFYLTELALKEYIGILIAYYR 239
L+ +++Y+GI+ +YR
Sbjct: 283 LT--------VVRDYLGIIRDHYR 298
>gi|313681413|ref|YP_004059151.1| hypothetical protein Sulku_0284 [Sulfuricurvum kujiense DSM 16994]
gi|313154273|gb|ADR32951.1| protein of unknown function DUF218 [Sulfuricurvum kujiense DSM
16994]
Length = 248
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 29/248 (11%)
Query: 6 IFLIVSYW--HLLCQSIR---KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
IFLI S +LL + R KI F+ F + + + + +LLK L+ +Y + L
Sbjct: 17 IFLISSALALYLLQRGNRRRAKILFVFSFAWI-TILSYPPFSALLLKPLENAYPKVQLHS 75
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I +LGNG T IP S S +R+ E + LYKS +I SG
Sbjct: 76 PFPR---YIHVLGNGHTSSQNIPLSSEL-SLTSLARVNEGILLYKSHPG----MKLIFSG 127
Query: 121 GDPQKHGLAESIVYNNK----LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+G +S+ K + GV +DI + ++ DT A+ + ++ K + + +
Sbjct: 128 -----YGGGDSVSNARKNSQLAIALGVNSNDIVILEEAKDT---AEEAIAVKKIVGSQPL 179
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII---PLSANFYLTELALKEYIGI 233
ILV+SA H+ R+ F+ GI + +D+L + P S +E A EY+G+
Sbjct: 180 ILVTSASHMVRASSIFRKNGICVIEAPTDFLVKKEDTLWQFPSSGGLRRSECAFHEYLGL 239
Query: 234 LIAYYRGN 241
L +G+
Sbjct: 240 LWEKLKGS 247
>gi|307705359|ref|ZP_07642221.1| conserved hypothetical protein [Streptococcus mitis SK597]
gi|307621146|gb|EFO00221.1| conserved hypothetical protein [Streptococcus mitis SK597]
Length = 259
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 47/229 (20%)
Query: 22 KIFFMSCFM-LLFSFI-------GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
++F+ + F+ +LF+FI G+ + IL L L P+ KK + I++ G
Sbjct: 37 ELFYTNHFLNILFAFIAYSYFIFGFAFVAFILYSILY------LFIPK-KKHYDFIIIHG 89
Query: 74 ----NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
+G + P + RI+ + ++Y YKS + + II SGG ++
Sbjct: 90 AGLLDGEKVTPLLKR-RIDKAVEAY---------YKS---KNSNIKIIASGGKGADEKIS 136
Query: 130 ESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKR 187
E+ N LL E+ V +D I LE QS T++N FS + + + K + V++ YH+ R
Sbjct: 137 EAQAITNYLLEETDVPQDAIILEDQSRTTYENLLFSKELGEELVAKPQFLFVTNDYHVFR 196
Query: 188 SQLYFQHFGINTKA-SCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ Y + + C +A +Y+ ++EY+ + +
Sbjct: 197 TSTYARKLNMKGDGLGCR------------TAGYYIPSAFIREYVALCV 233
>gi|226311001|ref|YP_002770895.1| hypothetical protein BBR47_14140 [Brevibacillus brevis NBRC 100599]
gi|226093949|dbj|BAH42391.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 213
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS R+ + LYK ++++GG + + E+ V N L+ G+ +DI
Sbjct: 65 PSPGLRERLEQAAILYKE----GYVSKLLVTGGLGEGKTITEAAVSRNYLVAKGIPEEDI 120
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
LE++S T++N + +++ ++ +++S YHL R+ + GI
Sbjct: 121 LLESKSTSTYENLLYGQQVLEEHHIQDALIISHDYHLARAMVMADSLGI 169
>gi|330685387|gb|EGG97045.1| putative membrane protein [Staphylococcus epidermidis VCU121]
Length = 320
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
S + + ++I++LG G P ++ R+ + +Y + +++
Sbjct: 140 SRHFNQSVDLIIVLGAGIFTEEVTPMLK--------ERLDRALEIYHYSEHKP---KLLV 188
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNI 176
SGG + ESI L++ GV D+I LE QS +T N +S +I + + I
Sbjct: 189 SGGQGPDEPIPESIAMQRYLIKQGVPNDNILLEQQSTNTHTNFVYSKDIIHDYFVNMPKI 248
Query: 177 ILVSSAYHLKRS 188
+ V+S +H+ R+
Sbjct: 249 VCVTSQFHILRA 260
>gi|291616915|ref|YP_003519657.1| YcbC [Pantoea ananatis LMG 20103]
gi|291151945|gb|ADD76529.1| YcbC [Pantoea ananatis LMG 20103]
Length = 308
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 18/144 (12%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
IV+LG G T P PS S R+ E +R + Q +M T +G +P+
Sbjct: 116 IVVLGGGYTYNPAW-----APSSNLLNNSLPRVTEGVRQWLRNPQATMVFTGAAAGHNPK 170
Query: 125 KHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ + ++ ES GV I + Q DT Q A+ S++I + + +LV+SA
Sbjct: 171 SNAWVAA-----QVAESLGVPDAHIHILDQPKDTEQEARAVSAVIGH---HSFLLVTSAN 222
Query: 184 HLKRSQLYFQHFGINTKASCSDYL 207
H+ R+ +FQ G+N A+ ++ L
Sbjct: 223 HMPRAMRFFQQAGLNPIAAPANQL 246
>gi|323499476|ref|ZP_08104447.1| hypothetical protein VISI1226_09254 [Vibrio sinaloensis DSM 21326]
gi|323315463|gb|EGA68503.1| hypothetical protein VISI1226_09254 [Vibrio sinaloensis DSM 21326]
Length = 267
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 37/223 (16%)
Query: 28 CFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIP 80
CF++LFSFIG + + T LL ++ Y S + D +I +++LG+G +
Sbjct: 39 CFIVLFSFIGIFLVAFQPVSTRLLMPIERQY-----SAFFPVDESIDYVMVLGSGHVVDD 93
Query: 81 TIPAIRIEPSFQSYSRIFE---TMRLYKSCKQHSMHCTIIISG--GDPQKHGLAESIVYN 135
IP E S R+ E MR+Y K +I+SG G + ++ + +
Sbjct: 94 EIPPTS-ELSRTGLMRLAEGIRIMRIYPGSK-------LILSGYAGGSE---ISNARMMA 142
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L GV + DI L + DT++ A+ +++ +K+ + +++V+SA H++R+ F
Sbjct: 143 KVALALGVSKSDIVLLETAKDTWEEARQAAAFVKH---RKLVVVTSASHMQRALNEFHSA 199
Query: 196 GINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIG 232
G+ + ++YL A+ P + TE E +G
Sbjct: 200 GLKPYPAPTNYLAHDNVTQAWTKYTPRAVYLEQTERYWHETLG 242
>gi|229827667|ref|ZP_04453736.1| hypothetical protein GCWU000182_03056 [Abiotrophia defectiva ATCC
49176]
gi|229788127|gb|EEP24241.1| hypothetical protein GCWU000182_03056 [Abiotrophia defectiva ATCC
49176]
Length = 319
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES-IVYNNKLLESGVE 144
R+ P + RI + + +K K + + +I SGG ++E+ ++N + E+ V
Sbjct: 157 RVTPLLKR--RIDKAVEAFK--KSRNSNIKLIASGGQGADEKISEARAIFNYLMEETDVP 212
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILVSSAYHLKRSQLYFQHFGINTKA-S 202
+ + +E QS T+QN FS + +++ + + V++ YH+ R+ Y + GI
Sbjct: 213 GEAVLMEDQSKTTYQNLLFSKKLGESLVENPRFLFVTNDYHVFRTSTYAKKIGIRGDGLG 272
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
CS +A++YL ++EY+ + +
Sbjct: 273 CS------------TASYYLPSAFIREYVALCV 293
>gi|323359408|ref|YP_004225804.1| hypothetical protein MTES_2960 [Microbacterium testaceum StLB037]
gi|323275779|dbj|BAJ75924.1| uncharacterized conserved protein [Microbacterium testaceum
StLB037]
Length = 337
Score = 48.1 bits (113), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 77/169 (45%), Gaps = 23/169 (13%)
Query: 69 IVLLGNG--TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
IV+LG+G +P + R++ + ++ R + + ++ SGG
Sbjct: 161 IVVLGSGLIRGEVPPLLRGRLDRAIAAWRR---------AVRAGGAAPVLVPSGGQGPDE 211
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVSSAYHL 185
E L + G+ D I+ ET+SL+T +N +FS ++ + G +++V+S YH+
Sbjct: 212 PRPEGEAMAEYLRDQGIPGDLIRPETRSLNTRENLEFSRVIVDGIDGGGPVLIVTSDYHM 271
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
R+ L + + + + A +A +++ L+EY+ +L
Sbjct: 272 LRAGLLARR-----RIPRARVVGAR------TAAYFVPSAFLREYVALL 309
>gi|239638178|ref|ZP_04679130.1| putative membrane protein [Staphylococcus warneri L37603]
gi|239596199|gb|EEQ78744.1| putative membrane protein [Staphylococcus warneri L37603]
Length = 320
Score = 48.1 bits (113), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH-CTII 117
S + + ++I++LG G P ++ R+ + +Y HS H ++
Sbjct: 140 SRHFNQSVDLIIVLGAGIFTEEVTPMLK--------ERLNRALEIY----HHSEHKPQLL 187
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI----KNMQG 173
+SGG + ESI L++ GV D+I LE QS +T N +S +I NM
Sbjct: 188 VSGGQGPDEPIPESIAMQRYLIKQGVPNDNILLEQQSTNTHTNFVYSKEIILQYFNNM-- 245
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINT 199
++ V+S +H+ R+ Q+ I T
Sbjct: 246 PKMVCVTSQFHILRALKLAQNLDIPT 271
>gi|154500224|ref|ZP_02038262.1| hypothetical protein BACCAP_03888 [Bacteroides capillosus ATCC
29799]
gi|150270956|gb|EDM98230.1| hypothetical protein BACCAP_03888 [Bacteroides capillosus ATCC
29799]
Length = 230
Score = 48.1 bits (113), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 65/119 (54%), Gaps = 13/119 (10%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--- 172
+I+SGG ++E+ + L+E+G D I LE S +T +N +S ++++++
Sbjct: 91 VIVSGGQGLDEPVSEAASMADYLIEAGYSDDYIYLEDNSHNTAENLGYSVALLESLSLDP 150
Query: 173 -GKNIILVSSAYHLKRSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELAL 227
I++VS+ +HL R+++ + FG ++T A+ S +L + S+ F+ LAL
Sbjct: 151 AEDEILIVSNGFHLTRARMLAERFGYGHVSTLAAPSSHLPSRISM------FFREPLAL 203
>gi|194335748|ref|YP_002017542.1| protein of unknown function DUF218 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308225|gb|ACF42925.1| protein of unknown function DUF218 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 248
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 18/205 (8%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
++ L++ ++ R +S K D I+VL G +I T+ + + R
Sbjct: 46 VMSDFLMRSVEVGEGRVPVSSVGKADA-IVVLSG----MIVTVDGAPLGEWGGAVDRFDG 100
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLA-ESIVYNNKLLESGVERDDIKLETQSLDTF 158
+ L+K+ + + G P + G+ E + + L GV + I+L ++ +T
Sbjct: 101 GVELFKAGRAP---VVVFTRGQVPWQPGVVPEGELLAKRALLLGVPQSAIRLTGKAGNTA 157
Query: 159 QNAQFSSSMI---KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA------ 209
A +S ++ K + IILV+SA+H++R++ F+ G + DY +
Sbjct: 158 DEAAAASVLLGASKKGVPRRIILVTSAFHMRRARFLFERAGFAVEPFLVDYQTSEKSPLT 217
Query: 210 YYSIIPLSANFYLTELALKEYIGIL 234
S +P + ++ AL+E IG+L
Sbjct: 218 VLSFLPNAEALAQSDRALREVIGLL 242
>gi|294491966|gb|ADE90722.1| conserved hypothetical protein [Escherichia coli IHE3034]
Length = 259
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVSARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++ LN + IP ++ E +G + + +G+
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|239833683|ref|ZP_04682011.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239821746|gb|EEQ93315.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 206
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 26/152 (17%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL-ESGVER 145
+ P R + RL+K + +I+ GD +YN +++ +GV
Sbjct: 38 VVPGGDGPPRAAQAARLWKEGRS-----PVILVTGD-------GDCLYNKRIMVRNGVNP 85
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC-- 203
I +E QS T+QNAQFS+ +++ ++ ++ ++V++ YH +R+ F +A+C
Sbjct: 86 SAIFVECQSGSTWQNAQFSAPVLREIRARSALVVTNWYHSRRAIASF-------RAACPQ 138
Query: 204 ----SDYLNAYYSIIPLSANFYLTELALKEYI 231
S + A EL KEY+
Sbjct: 139 MRFISSPIGGDDGRPGFPATPADMELVAKEYV 170
>gi|197105490|ref|YP_002130867.1| hypothetical protein PHZ_c2027 [Phenylobacterium zucineum HLK1]
gi|196478910|gb|ACG78438.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 186
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
+++ + H ++ SGG +HG +E+ V +L G+ + + L+ +SLDT Q+A
Sbjct: 43 WQAAQAHP-GAQVLCSGGV-GRHGPSEASVMAERLAALGLAAERLILDEESLDTLQSAGA 100
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ + + ++++ S AYH+ R +L G + A
Sbjct: 101 VARWRRRLGAADVVVCSDAYHVPRIRLLLGALGTPSVAG 139
>gi|51891778|ref|YP_074469.1| hypothetical protein STH640 [Symbiobacterium thermophilum IAM
14863]
gi|51855467|dbj|BAD39625.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 187
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R LYK+ + + I+GGD + G+ E+ + ++E V + I +E +
Sbjct: 39 ERAERAAELYKA----GLAPKVFITGGDKRGIGVCEAERLRDHMVELSVPAEAIDIECEG 94
Query: 155 LDTFQNAQFSSSMIKNMQG----KNIILVSSAYHLKRSQLYFQHF-GINTKASC 203
L+T + Q+S I+ G KN++LVS+ +H++R + ++ TK +C
Sbjct: 95 LNTIEQVQYSVKRIEETIGWKNIKNVLLVSAPHHMRRVKRTIANYIPRETKITC 148
>gi|322514156|ref|ZP_08067222.1| hypothetical protein HMPREF0027_0974 [Actinobacillus ureae ATCC
25976]
gi|322119969|gb|EFX91970.1| hypothetical protein HMPREF0027_0974 [Actinobacillus ureae ATCC
25976]
Length = 248
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E MR Y + I+++GG P+ I+ L +E +S T
Sbjct: 105 LERMR-YAAYLHKQTGLPILVTGGSPEGREPEAKIMAQE--LNDFFHVPVTWVEEKSNVT 161
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY----YSI 213
+NA FS ++ + ++I+LV++ +H+KR+++ F+ G N A+ + A
Sbjct: 162 EENATFSKPILMHAGIQHIVLVTNQWHMKRAKMLFEREGFNVLAASTTAHQALDIGILPF 221
Query: 214 IPLSANFYLTELALKEYIG 232
IP + + +ALKE+IG
Sbjct: 222 IPQAQALQNSSIALKEWIG 240
>gi|331646185|ref|ZP_08347288.1| putative KicA protein [Escherichia coli M605]
gi|330910700|gb|EGH39210.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli AA86]
gi|331044937|gb|EGI17064.1| putative KicA protein [Escherichia coli M605]
Length = 259
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++ LN + IP ++ E +G + + +G+
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|254381969|ref|ZP_04997332.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194340877|gb|EDX21843.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 338
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 15/141 (10%)
Query: 66 GNI--IVLLGNGTT---IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
GN+ +V+LG+G T +P + A R+E + T +L + ++ SG
Sbjct: 159 GNVDYVVVLGSGLTGGEDVPPLLASRLEKGHR-----IHTAQLARGGPAP----LLLASG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNIILV 179
G + E+ + L+ GV R+ ++LE +S T +N +FS M + G ++V
Sbjct: 210 GQGPGEAVPEARAMADWLIARGVAREHVRLEDRSRTTEENLRFSRELMAEENPGYRCVVV 269
Query: 180 SSAYHLKRSQLYFQHFGINTK 200
++++H R+ + + G+N +
Sbjct: 270 TNSFHAFRAAMTARRAGVNGQ 290
>gi|218548436|ref|YP_002382227.1| hypothetical protein EFER_1064 [Escherichia fergusonii ATCC 35469]
gi|218355977|emb|CAQ88593.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia fergusonii ATCC 35469]
gi|325496858|gb|EGC94717.1| hypothetical protein ECD227_0955 [Escherichia fergusonii ECD227]
Length = 259
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++ LN + IP ++ E +G + + +G+
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|134099149|ref|YP_001104810.1| hypothetical protein SACE_2594 [Saccharopolyspora erythraea NRRL
2338]
gi|291009369|ref|ZP_06567342.1| hypothetical protein SeryN2_33020 [Saccharopolyspora erythraea NRRL
2338]
gi|133911772|emb|CAM01885.1| putative membrane protein [Saccharopolyspora erythraea NRRL 2338]
Length = 331
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++D + +V+LG+G + R+ P S R+ ++++ + +++SGG
Sbjct: 155 RRDVDFVVVLGSG------LIGSRVPPLLAS--RLDRGREVFETAQAKGRDPMLVVSGGQ 206
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSS 181
+ E+ + L GV D I +E QS T +N +FS ++++ + ++V++
Sbjct: 207 GPGEDVPEARAMADYLGSRGVPEDRILIEDQSRSTEENLRFSKAIMQERRSDYRCLVVTN 266
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+H+ R+ + +N + S +A ++ ++E+I I +A+
Sbjct: 267 NFHVMRAARTARSEKVNGQVIGSR-----------TARYFWPSAIIREFIAIFLAH 311
>gi|167854576|ref|ZP_02477357.1| hypothetical protein HPS_02329 [Haemophilus parasuis 29755]
gi|167854331|gb|EDS25564.1| hypothetical protein HPS_02329 [Haemophilus parasuis 29755]
Length = 247
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
Y + Q ++I+G P+ G +E+ V K LE LE ++ T +NA+F
Sbjct: 110 YAAFLQKETGLPLLITGSSPK--GTSEAAVMK-KELEQFFHIPTQWLEEKAKTTAENAKF 166
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT--------KASCSDYLNAYYSIIP 215
S +++ I+LV++ +H++R+++ F+ G K + LN +Y IP
Sbjct: 167 SKPILEKEGINKIVLVTNQWHMQRARMLFEREGFKILPASVGAGKMPETYGLNVFY-FIP 225
Query: 216 LSANFYLTELALKEYIG 232
S + ALKE+IG
Sbjct: 226 QSGALHSNMHALKEWIG 242
>gi|15893643|ref|NP_346992.1| hypothetical protein CA_C0352 [Clostridium acetobutylicum ATCC 824]
gi|15023198|gb|AAK78332.1|AE007549_12 Uncharacterized conserved membrane protein, SANA family
[Clostridium acetobutylicum ATCC 824]
gi|325507765|gb|ADZ19401.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
Length = 225
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 17/156 (10%)
Query: 53 YQRPLLSPQWKKDG-NIIVLLGNGTTIIPTIPAIRI-EPSFQSYSRIFETMRLYKSCKQH 110
Y+ P+ + ++D ++I++LG PA++ +PS R+ + ++L+ +
Sbjct: 36 YKSPIT--KLRRDSFDVIIILG--------FPALQNGKPSPIMRERVIKAVKLFNKGYAN 85
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ C+ GG K+ ES V N G+ + E +S +T+QN Q S +++N
Sbjct: 86 KIICS---GGGVYNKY--IESDVMANFAKSLGIPNGCLIKEDKSRNTYQNIQNSIKIMEN 140
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+ I+V+S +HL+RS + F I + SDY
Sbjct: 141 KHWSSAIVVTSPWHLRRSNYFLSKFNIAYRMEKSDY 176
>gi|82544659|ref|YP_408606.1| hypothetical protein SBO_2208 [Shigella boydii Sb227]
gi|187732229|ref|YP_001880883.1| hypothetical protein SbBS512_E2405 [Shigella boydii CDC 3083-94]
gi|81246070|gb|ABB66778.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|187429221|gb|ACD08495.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
gi|320173261|gb|EFW48470.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Shigella dysenteriae CDC
74-1112]
gi|320187456|gb|EFW62146.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Shigella flexneri CDC 796-83]
gi|332093351|gb|EGI98409.1| hypothetical protein SB359474_2557 [Shigella boydii 3594-74]
Length = 259
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ E +G + + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|301381971|ref|ZP_07230389.1| hypothetical protein PsyrptM_05027 [Pseudomonas syringae pv. tomato
Max13]
Length = 256
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 111/256 (43%), Gaps = 39/256 (15%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR-----PLLSP 60
+ LI+ +W + R +CF + +P ++ +F+ ++ PL
Sbjct: 19 LLLILGWW---LRRSRPRLATACFAAGLGGLWLMSVPVVV----EFAARKMEQIPPLPQQ 71
Query: 61 QWK---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI---FETMRLYKSCKQHSMHC 114
QW + + IV+LGNG R P++ + + E +RL + S
Sbjct: 72 QWATLAQQADAIVVLGNGRE--------RNSPTWGADTPTGLGLERLRLAARLAKES-GL 122
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKL-ETQSLDTFQNAQFSSSMIKNMQ 172
I+ +GG +E+ + L + GV ++ E S T++NA+ ++++++
Sbjct: 123 PILTAGGLHFDQPPSEASIMAQALQQDFGV---TVRWQEGLSRTTWENAKMTAAVLQPQG 179
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELAL 227
K ++LV+ A+H+ R++ F+ G ++ +L + +P S F + + L
Sbjct: 180 IKRVVLVTQAWHMPRARWSFEQAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLL 239
Query: 228 KEYIGILI--AYYRGN 241
E G+L+ YRG
Sbjct: 240 NEAAGLLVYPWIYRGG 255
>gi|229523809|ref|ZP_04413214.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae bv. albensis
VL426]
gi|229337390|gb|EEO02407.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae bv. albensis
VL426]
Length = 282
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 39/227 (17%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTII 79
C ++LFS G + + T LL L+ +Y L +G + +++LGNG I
Sbjct: 47 GCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL-----PVEGTLDYVMVLGNGHVID 101
Query: 80 PTIPAIRIEPSFQSYSRIFETMR---LYKSCKQHSMHCTIIISG---GDPQKHGLAESIV 133
IP E + + R+ E +R +Y K +I+SG G H + V
Sbjct: 102 DDIPPTS-ELTRAALMRLTEGIRISRMYPGSK-------LILSGYAGGSEVSHARMMARV 153
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L GV + DI L + D ++ A+ +++ + Q K ++LV+SA H+KR+ F+
Sbjct: 154 A----LALGVPKSDIILLETAKDAWEEARQAAAFV---QQKRMVLVTSASHMKRAMREFE 206
Query: 194 HFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGIL 234
G+ + ++YL + IP S TE E +G++
Sbjct: 207 SAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLEQTEQYWHETLGLM 253
>gi|182678647|ref|YP_001832793.1| hypothetical protein Bind_1673 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182634530|gb|ACB95304.1| protein of unknown function DUF218 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 284
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 16/144 (11%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHG--LAESIVYNNKLLES-GVERDDIKLETQSL 155
E RL+ K +I +GG G +ESI Y +L ++ GV + + E S
Sbjct: 114 ELSRLFPQAK-------LIFTGGSGDLMGDQPSESI-YARELWQNLGVPAEQMVFEGNSR 165
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN----AYY 211
+T++NA F+ +IK +LV+SA H+ RS F+ G N ++Y+ +
Sbjct: 166 NTWENAVFTRDLIKPKPEDRYLLVTSAAHMPRSVGIFRKVGFNVIPYNANYMTIGDARDW 225
Query: 212 SIIPLSAN-FYLTELALKEYIGIL 234
S+ L+ + + L+E+IG+L
Sbjct: 226 SVTTLAHDRLRMLSFGLREWIGLL 249
>gi|323463635|gb|ADX75788.1| membrane protein [Staphylococcus pseudintermedius ED99]
Length = 317
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II+SGG ++E++ L++ G+ I +E QS +T QN +S + Q +
Sbjct: 186 IIVSGGQGPDEPISEALAMQRYLIQQGIAPKQITMEDQSTNTRQNIYYSKHYLALHQQPH 245
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I+V+S++H+ R+ + + L+A+ P ++ EL +++Y G+L
Sbjct: 246 TIIVTSSFHILRA----------LRLAERQQLHAFGYGAPTPHHWVSREL-IRDYSGLLF 294
Query: 236 AYYR 239
Y R
Sbjct: 295 QYPR 298
>gi|260768178|ref|ZP_05877112.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio furnissii CIP 102972]
gi|260616208|gb|EEX41393.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio furnissii CIP 102972]
gi|315179879|gb|ADT86793.1| hypothetical protein vfu_A01625 [Vibrio furnissii NCTC 11218]
Length = 269
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 37/195 (18%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK-------DGNI--IVLLGNGTTI 78
C ++LFS G I L Q R LL P ++ DG I +++LGNG +
Sbjct: 39 CLVVLFSLFG------IFLISFQPVSSR-LLMPLERQYSAFLPVDGTIDYVMVLGNGHVV 91
Query: 79 IPTIPAIRIEPSFQSYSRIFE---TMRLYKSCKQHSMHCTIIISG---GDPQKHGLAESI 132
IP E S + R+ E MR+Y K +I+SG G H +
Sbjct: 92 DDQIPPTS-ELSRAALMRLAEGIRVMRMYPGSK-------LILSGYAGGSEFSHARMLAR 143
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V L GV + DI L + DT++ A+ +++ + Q + ++LV+SA H++R+ F
Sbjct: 144 VA----LALGVAKSDIILLETAKDTWEEARQAAAFV---QQRRLVLVTSASHMQRALNEF 196
Query: 193 QHFGINTKASCSDYL 207
G+ + ++YL
Sbjct: 197 HSAGLQPIPAPTNYL 211
>gi|82777557|ref|YP_403906.1| hypothetical protein SDY_2338 [Shigella dysenteriae Sd197]
gi|309787791|ref|ZP_07682401.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|331651940|ref|ZP_08352959.1| putative KicA protein [Escherichia coli M718]
gi|81241705|gb|ABB62415.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308924190|gb|EFP69687.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|331050218|gb|EGI22276.1| putative KicA protein [Escherichia coli M718]
Length = 259
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLSLLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ E +G + + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|30062454|ref|NP_836625.1| hypothetical protein S0980 [Shigella flexneri 2a str. 2457T]
gi|56479770|ref|NP_706838.2| hypothetical protein SF0916 [Shigella flexneri 2a str. 301]
gi|110804928|ref|YP_688448.1| hypothetical protein SFV_0921 [Shigella flexneri 5 str. 8401]
gi|191166971|ref|ZP_03028794.1| conserved hypothetical protein [Escherichia coli B7A]
gi|193064658|ref|ZP_03045737.1| conserved hypothetical protein [Escherichia coli E22]
gi|194428374|ref|ZP_03060915.1| conserved hypothetical protein [Escherichia coli B171]
gi|209918170|ref|YP_002292254.1| hypothetical protein ECSE_0979 [Escherichia coli SE11]
gi|218694393|ref|YP_002402060.1| hypothetical protein EC55989_0965 [Escherichia coli 55989]
gi|256020952|ref|ZP_05434817.1| hypothetical protein ShiD9_18687 [Shigella sp. D9]
gi|260843169|ref|YP_003220947.1| hypothetical protein ECO103_0964 [Escherichia coli O103:H2 str.
12009]
gi|260867092|ref|YP_003233494.1| hypothetical protein ECO111_0988 [Escherichia coli O111:H- str.
11128]
gi|300816976|ref|ZP_07097195.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300902921|ref|ZP_07120866.1| hypothetical protein HMPREF9536_01066 [Escherichia coli MS 84-1]
gi|301302471|ref|ZP_07208602.1| hypothetical protein HMPREF9347_01048 [Escherichia coli MS 124-1]
gi|307311693|ref|ZP_07591333.1| protein of unknown function DUF218 [Escherichia coli W]
gi|309795095|ref|ZP_07689515.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|332282175|ref|ZP_08394588.1| conserved hypothetical protein [Shigella sp. D9]
gi|30040700|gb|AAP16431.1| hypothetical protein S0980 [Shigella flexneri 2a str. 2457T]
gi|56383321|gb|AAN42545.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|110614476|gb|ABF03143.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|190902965|gb|EDV62691.1| conserved hypothetical protein [Escherichia coli B7A]
gi|192927715|gb|EDV82330.1| conserved hypothetical protein [Escherichia coli E22]
gi|194413589|gb|EDX29870.1| conserved hypothetical protein [Escherichia coli B171]
gi|209911429|dbj|BAG76503.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218351125|emb|CAU96829.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli 55989]
gi|257758316|dbj|BAI29813.1| conserved predicted inner membrane protein [Escherichia coli
O103:H2 str. 12009]
gi|257763448|dbj|BAI34943.1| conserved predicted inner membrane protein [Escherichia coli
O111:H- str. 11128]
gi|281600279|gb|ADA73263.1| hypothetical protein SFxv_0991 [Shigella flexneri 2002017]
gi|300405063|gb|EFJ88601.1| hypothetical protein HMPREF9536_01066 [Escherichia coli MS 84-1]
gi|300530328|gb|EFK51390.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300842310|gb|EFK70070.1| hypothetical protein HMPREF9347_01048 [Escherichia coli MS 124-1]
gi|306908248|gb|EFN38747.1| protein of unknown function DUF218 [Escherichia coli W]
gi|308121399|gb|EFO58661.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|313650839|gb|EFS15240.1| hypothetical protein SF2457T_0842 [Shigella flexneri 2a str. 2457T]
gi|315060205|gb|ADT74532.1| conserved inner membrane protein [Escherichia coli W]
gi|315257961|gb|EFU37929.1| probable membrane protein [Escherichia coli MS 85-1]
gi|315296223|gb|EFU55530.1| conserved hypothetical protein [Escherichia coli MS 16-3]
gi|320202316|gb|EFW76887.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli EC4100B]
gi|323174979|gb|EFZ60594.1| hypothetical protein ECLT68_0536 [Escherichia coli LT-68]
gi|323175457|gb|EFZ61052.1| hypothetical protein ECOK1180_5741 [Escherichia coli 1180]
gi|323379235|gb|ADX51503.1| protein of unknown function DUF218 [Escherichia coli KO11]
gi|324019071|gb|EGB88290.1| hypothetical protein HMPREF9542_02266 [Escherichia coli MS 117-3]
gi|324117215|gb|EGC11123.1| hypothetical protein ERBG_02930 [Escherichia coli E1167]
gi|332104527|gb|EGJ07873.1| conserved hypothetical protein [Shigella sp. D9]
gi|332759007|gb|EGJ89317.1| hypothetical protein SF434370_1174 [Shigella flexneri 4343-70]
gi|332760112|gb|EGJ90410.1| hypothetical protein SF274771_1134 [Shigella flexneri 2747-71]
gi|332762691|gb|EGJ92954.1| hypothetical protein SFK671_1086 [Shigella flexneri K-671]
gi|332767869|gb|EGJ98059.1| hypothetical protein SF293071_1100 [Shigella flexneri 2930-71]
gi|333007013|gb|EGK26508.1| hypothetical protein SFK218_1285 [Shigella flexneri K-218]
gi|333008904|gb|EGK28364.1| hypothetical protein SFK272_1422 [Shigella flexneri K-272]
gi|333020002|gb|EGK39273.1| hypothetical protein SFK304_1250 [Shigella flexneri K-304]
gi|333020214|gb|EGK39484.1| hypothetical protein SFK227_1149 [Shigella flexneri K-227]
Length = 259
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ E +G + + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|319893318|ref|YP_004150193.1| Integral membrane protein [Staphylococcus pseudintermedius
HKU10-03]
gi|317163014|gb|ADV06557.1| Integral membrane protein [Staphylococcus pseudintermedius
HKU10-03]
Length = 260
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II+SGG ++E++ L++ G+ I +E QS +T QN +S + Q +
Sbjct: 129 IIVSGGQGPDEPISEALAMQRYLIQQGIAPKQITMEDQSTNTRQNIYYSKHYLALHQQPH 188
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I+V+S++H+ R+ + + L+A+ P ++ EL +++Y G+L
Sbjct: 189 TIIVTSSFHILRA----------LRLAERQQLHAFGYGAPTPHHWVSREL-IRDYSGLLF 237
Query: 236 AYYR 239
Y R
Sbjct: 238 QYPR 241
>gi|194431483|ref|ZP_03063775.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|194420308|gb|EDX36385.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|320182013|gb|EFW56918.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Shigella boydii ATCC 9905]
gi|332091384|gb|EGI96471.1| hypothetical protein SD15574_2367 [Shigella dysenteriae 155-74]
gi|332092552|gb|EGI97625.1| hypothetical protein SB521682_1309 [Shigella boydii 5216-82]
Length = 259
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 34/227 (14%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQR---PLLS--PQWKKDGNI--IVLLGNGTTIIPTIPA 84
+F IGW P +LL LQ R P+ S P W + IV+LG G T P
Sbjct: 41 IFISIGW---PALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP---- 93
Query: 85 IRIEPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+ PS S R+ E +RL++ + +I +GG + + ++ + V
Sbjct: 94 -QWAPSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQS 148
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINT 199
GV + I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N
Sbjct: 149 LGVPHEQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNP 204
Query: 200 KASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ ++ LN + IP ++ E +G + + +G
Sbjct: 205 LPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|218288615|ref|ZP_03492892.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
gi|218241272|gb|EED08447.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
Length = 199
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
EPS +R+ + LY+ + II+SGG + ++E+ L+ +G+ D
Sbjct: 55 EPSHPLVARLRAAIALYRQGYIRA----IIVSGGQGENETVSEARSMKRFLVMNGIPADA 110
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ E S +T++N SS+++++ + ++++S YHL R+ + G++
Sbjct: 111 VHEERMSTNTWENLYHSSAIMRDRGYRTAVIITSDYHLPRALAVARMLGMDA 162
>gi|26991472|ref|NP_746897.1| hypothetical protein PP_4792 [Pseudomonas putida KT2440]
gi|24986550|gb|AAN70361.1|AE016678_2 conserved hypothetical protein [Pseudomonas putida KT2440]
Length = 253
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 81/179 (45%), Gaps = 23/179 (12%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSF----QSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG G R +P++ Q + E MR + S ++ SGG
Sbjct: 81 DAIVVLGAGRE--------RGDPAWGGGDQPTATALERMRFAARLAKAS-GLPVLTSGGL 131
Query: 123 PQKHGLAESIVYNNKLLES-GVERDDIKL-ETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+E+ + +L E VE +K E S T++NAQ ++ +++ + + ++LV+
Sbjct: 132 HYGTPPSEARLMAERLHEDFAVE---VKWREEASRTTWENAQLTAKVLQPLGFRRVVLVT 188
Query: 181 SAYHLKRSQLYFQHFGINTKAS-----CSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
A+H++RS+ F+ G + D+ + ++P S + + E +G++
Sbjct: 189 QAWHMQRSRWSFEQAGFEVVPAPVGFLGRDHARPFGGLLPESRAMWQSGQLFNEVVGLV 247
>gi|26246946|ref|NP_752986.1| hypothetical protein c1061 [Escherichia coli CFT073]
gi|110641117|ref|YP_668847.1| hypothetical protein ECP_0931 [Escherichia coli 536]
gi|191172139|ref|ZP_03033683.1| conserved hypothetical protein [Escherichia coli F11]
gi|215486045|ref|YP_002328476.1| hypothetical protein E2348C_0913 [Escherichia coli O127:H6 str.
E2348/69]
gi|218688763|ref|YP_002396975.1| hypothetical protein ECED1_0950 [Escherichia coli ED1a]
gi|227884115|ref|ZP_04001920.1| inner membrane protein [Escherichia coli 83972]
gi|300978421|ref|ZP_07174269.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|301047819|ref|ZP_07194871.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|312969014|ref|ZP_07783221.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|26107346|gb|AAN79529.1|AE016758_133 Hypothetical protein ycbC [Escherichia coli CFT073]
gi|110342709|gb|ABG68946.1| putative membrane protein [Escherichia coli 536]
gi|190907666|gb|EDV67261.1| conserved hypothetical protein [Escherichia coli F11]
gi|215264117|emb|CAS08461.1| conserved predicted inner membrane protein [Escherichia coli
O127:H6 str. E2348/69]
gi|218426327|emb|CAR07152.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli ED1a]
gi|227838867|gb|EEJ49333.1| inner membrane protein [Escherichia coli 83972]
gi|300300311|gb|EFJ56696.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300409663|gb|EFJ93201.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|307552759|gb|ADN45534.1| conserved inner membrane protein [Escherichia coli ABU 83972]
gi|312286416|gb|EFR14329.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|315291218|gb|EFU50578.1| conserved hypothetical protein [Escherichia coli MS 153-1]
gi|320196586|gb|EFW71209.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli WV_060327]
gi|323967167|gb|EGB62591.1| hypothetical protein ERJG_01450 [Escherichia coli M863]
gi|323976693|gb|EGB71781.1| hypothetical protein ERFG_02482 [Escherichia coli TW10509]
gi|324009859|gb|EGB79078.1| hypothetical protein HMPREF9532_00410 [Escherichia coli MS 57-2]
gi|324012947|gb|EGB82166.1| hypothetical protein HMPREF9533_03015 [Escherichia coli MS 60-1]
gi|327253710|gb|EGE65339.1| hypothetical protein ECSTEC7V_1135 [Escherichia coli STEC_7v]
Length = 259
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPIADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++ LN + IP ++ E +G + + +G+
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|15800781|ref|NP_286795.1| hypothetical protein Z1267 [Escherichia coli O157:H7 EDL933]
gi|15830257|ref|NP_309030.1| hypothetical protein ECs1003 [Escherichia coli O157:H7 str. Sakai]
gi|16128887|ref|NP_415440.1| conserved protein, DUF218 superfamily [Escherichia coli str. K-12
substr. MG1655]
gi|89107770|ref|AP_001550.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. W3110]
gi|91210021|ref|YP_540007.1| hypothetical protein UTI89_C0991 [Escherichia coli UTI89]
gi|117623138|ref|YP_852051.1| hypothetical protein APECO1_32 [Escherichia coli APEC O1]
gi|157155611|ref|YP_001462138.1| hypothetical protein EcE24377A_1017 [Escherichia coli E24377A]
gi|157160441|ref|YP_001457759.1| hypothetical protein EcHS_A1027 [Escherichia coli HS]
gi|168751183|ref|ZP_02776205.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|168757012|ref|ZP_02782019.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|168762943|ref|ZP_02787950.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|168769915|ref|ZP_02794922.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|168776227|ref|ZP_02801234.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|168784117|ref|ZP_02809124.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|168787349|ref|ZP_02812356.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|168801395|ref|ZP_02826402.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|170020678|ref|YP_001725632.1| hypothetical protein EcolC_2676 [Escherichia coli ATCC 8739]
gi|170080578|ref|YP_001729898.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
gi|170681104|ref|YP_001744250.1| hypothetical protein EcSMS35_2201 [Escherichia coli SMS-3-5]
gi|188494945|ref|ZP_03002215.1| conserved hypothetical protein [Escherichia coli 53638]
gi|194438715|ref|ZP_03070802.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|208808261|ref|ZP_03250598.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208816346|ref|ZP_03257525.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208822106|ref|ZP_03262425.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209397397|ref|YP_002269592.1| hypothetical protein ECH74115_1080 [Escherichia coli O157:H7 str.
EC4115]
gi|217325067|ref|ZP_03441151.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|218704347|ref|YP_002411866.1| hypothetical protein ECUMN_1113 [Escherichia coli UMN026]
gi|237707092|ref|ZP_04537573.1| YcbC [Escherichia sp. 3_2_53FAA]
gi|238900178|ref|YP_002925974.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|253774051|ref|YP_003036882.1| hypothetical protein ECBD_2675 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161034|ref|YP_003044142.1| hypothetical protein ECB_00924 [Escherichia coli B str. REL606]
gi|254792119|ref|YP_003076956.1| hypothetical protein ECSP_1024 [Escherichia coli O157:H7 str.
TW14359]
gi|256023379|ref|ZP_05437244.1| hypothetical protein E4_08394 [Escherichia sp. 4_1_40B]
gi|261227423|ref|ZP_05941704.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|291281921|ref|YP_003498739.1| hypothetical protein G2583_1155 [Escherichia coli O55:H7 str.
CB9615]
gi|293404225|ref|ZP_06648219.1| hypothetical protein ECGG_02613 [Escherichia coli FVEC1412]
gi|297516352|ref|ZP_06934738.1| hypothetical protein EcolOP_01862 [Escherichia coli OP50]
gi|298380005|ref|ZP_06989610.1| hypothetical protein ECFG_02808 [Escherichia coli FVEC1302]
gi|300901650|ref|ZP_07119710.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300929615|ref|ZP_07145077.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300937735|ref|ZP_07152536.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300949717|ref|ZP_07163696.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300955432|ref|ZP_07167806.1| hypothetical protein HMPREF9547_01317 [Escherichia coli MS 175-1]
gi|301022414|ref|ZP_07186297.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|301643440|ref|ZP_07243488.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|306812627|ref|ZP_07446820.1| hypothetical protein ECNC101_11962 [Escherichia coli NC101]
gi|307137549|ref|ZP_07496905.1| hypothetical protein EcolH7_05381 [Escherichia coli H736]
gi|312971048|ref|ZP_07785227.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|331641446|ref|ZP_08342581.1| putative KicA protein [Escherichia coli H736]
gi|331662333|ref|ZP_08363256.1| putative KicA protein [Escherichia coli TA143]
gi|77416806|sp|P0AB02|YCBC_ECO57 RecName: Full=Uncharacterized protein ycbC
gi|77416807|sp|P0AB01|YCBC_ECOLI RecName: Full=Uncharacterized protein ycbC
gi|12514089|gb|AAG55405.1|AE005281_8 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|1787150|gb|AAC74006.1| conserved protein, DUF218 superfamily [Escherichia coli str. K-12
substr. MG1655]
gi|4062491|dbj|BAA35666.1| conserved inner membrane protein [Escherichia coli str. K12 substr.
W3110]
gi|13360462|dbj|BAB34426.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|91071595|gb|ABE06476.1| probable membrane protein [Escherichia coli UTI89]
gi|115512262|gb|ABJ00337.1| YcbC [Escherichia coli APEC O1]
gi|157066121|gb|ABV05376.1| conserved hypothetical protein [Escherichia coli HS]
gi|157077641|gb|ABV17349.1| conserved hypothetical protein [Escherichia coli E24377A]
gi|169755606|gb|ACA78305.1| protein of unknown function DUF218 [Escherichia coli ATCC 8739]
gi|169888413|gb|ACB02120.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. DH10B]
gi|170518822|gb|ACB17000.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
gi|187768343|gb|EDU32187.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|188014720|gb|EDU52842.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|188490144|gb|EDU65247.1| conserved hypothetical protein [Escherichia coli 53638]
gi|188998655|gb|EDU67641.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|189355905|gb|EDU74324.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|189361104|gb|EDU79523.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|189366790|gb|EDU85206.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|189372700|gb|EDU91116.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|189376425|gb|EDU94841.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|194422347|gb|EDX38347.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|208728062|gb|EDZ77663.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208732994|gb|EDZ81682.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208737591|gb|EDZ85274.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209158797|gb|ACI36230.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4115]
gi|209774788|gb|ACI85706.1| hypothetical protein ECs1003 [Escherichia coli]
gi|209774790|gb|ACI85707.1| hypothetical protein ECs1003 [Escherichia coli]
gi|209774792|gb|ACI85708.1| hypothetical protein ECs1003 [Escherichia coli]
gi|209774794|gb|ACI85709.1| hypothetical protein ECs1003 [Escherichia coli]
gi|209774796|gb|ACI85710.1| hypothetical protein ECs1003 [Escherichia coli]
gi|217321288|gb|EEC29712.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|218431444|emb|CAR12322.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli UMN026]
gi|222032651|emb|CAP75390.1| Uncharacterized protein ycbC [Escherichia coli LF82]
gi|226898302|gb|EEH84561.1| YcbC [Escherichia sp. 3_2_53FAA]
gi|238860178|gb|ACR62176.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|242376735|emb|CAQ31448.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|253325095|gb|ACT29697.1| protein of unknown function DUF218 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972935|gb|ACT38606.1| conserved inner membrane protein [Escherichia coli B str. REL606]
gi|253977149|gb|ACT42819.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|254591519|gb|ACT70880.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
TW14359]
gi|260449934|gb|ACX40356.1| protein of unknown function DUF218 [Escherichia coli DH1]
gi|281178051|dbj|BAI54381.1| conserved hypothetical protein [Escherichia coli SE15]
gi|284920771|emb|CBG33834.1| putative membrane protein [Escherichia coli 042]
gi|290761794|gb|ADD55755.1| hypothetical protein G2583_1155 [Escherichia coli O55:H7 str.
CB9615]
gi|291428811|gb|EFF01836.1| hypothetical protein ECGG_02613 [Escherichia coli FVEC1412]
gi|298279703|gb|EFI21211.1| hypothetical protein ECFG_02808 [Escherichia coli FVEC1302]
gi|299881255|gb|EFI89466.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|300317655|gb|EFJ67439.1| hypothetical protein HMPREF9547_01317 [Escherichia coli MS 175-1]
gi|300354943|gb|EFJ70813.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300450898|gb|EFK14518.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300457242|gb|EFK20735.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300462452|gb|EFK25945.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|301078154|gb|EFK92960.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|305853390|gb|EFM53829.1| hypothetical protein ECNC101_11962 [Escherichia coli NC101]
gi|307627653|gb|ADN71957.1| hypothetical protein UM146_12950 [Escherichia coli UM146]
gi|309701196|emb|CBJ00496.1| putative membrane protein [Escherichia coli ETEC H10407]
gi|310336809|gb|EFQ01976.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|312945440|gb|ADR26267.1| hypothetical protein NRG857_04195 [Escherichia coli O83:H1 str. NRG
857C]
gi|315135568|dbj|BAJ42727.1| hypothetical protein ECDH1ME8569_0871 [Escherichia coli DH1]
gi|315287553|gb|EFU46959.1| conserved hypothetical protein [Escherichia coli MS 110-3]
gi|315619114|gb|EFU99694.1| conserved hypothetical protein [Escherichia coli 3431]
gi|320192594|gb|EFW67235.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli O157:H7 str.
EC1212]
gi|320637788|gb|EFX07580.1| hypothetical protein ECO5101_23325 [Escherichia coli O157:H7 str.
G5101]
gi|320642913|gb|EFX12114.1| hypothetical protein ECO9389_03076 [Escherichia coli O157:H- str.
493-89]
gi|320648370|gb|EFX17025.1| hypothetical protein ECO2687_19186 [Escherichia coli O157:H- str. H
2687]
gi|320653686|gb|EFX21760.1| hypothetical protein ECO7815_15513 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659831|gb|EFX27387.1| hypothetical protein ECO5905_25023 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320664300|gb|EFX31451.1| hypothetical protein ECOSU61_01678 [Escherichia coli O157:H7 str.
LSU-61]
gi|323190740|gb|EFZ76009.1| hypothetical protein ECRN5871_0979 [Escherichia coli RN587/1]
gi|323938026|gb|EGB34288.1| hypothetical protein ERCG_00752 [Escherichia coli E1520]
gi|323942836|gb|EGB39001.1| hypothetical protein ERDG_00704 [Escherichia coli E482]
gi|323953372|gb|EGB49238.1| hypothetical protein ERKG_00257 [Escherichia coli H252]
gi|323958225|gb|EGB53934.1| hypothetical protein ERLG_00664 [Escherichia coli H263]
gi|323962912|gb|EGB58486.1| hypothetical protein ERGG_00660 [Escherichia coli H489]
gi|323973205|gb|EGB68397.1| hypothetical protein ERHG_00864 [Escherichia coli TA007]
gi|326338185|gb|EGD62014.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli O157:H7 str.
1125]
gi|326346162|gb|EGD69900.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli O157:H7 str.
1044]
gi|331038244|gb|EGI10464.1| putative KicA protein [Escherichia coli H736]
gi|331060755|gb|EGI32719.1| putative KicA protein [Escherichia coli TA143]
Length = 259
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++ LN + IP ++ E +G + + +G+
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|196039056|ref|ZP_03106363.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196030201|gb|EDX68801.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
Length = 192
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 39 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----AIAIVSGG 83
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S+ T +N +FS +I + K +I V++
Sbjct: 84 KGKGEDISEALAMKNELMKLNIAEDRIIMEDKSMSTDENIKFSKPLIPDNMKKGMI-VTN 142
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 143 DFHMFRAK 150
>gi|153010699|ref|YP_001371913.1| hypothetical protein Oant_3378 [Ochrobactrum anthropi ATCC 49188]
gi|151562587|gb|ABS16084.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 206
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 24/151 (15%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P R E RL+K + +I+ GD + + ++ GV
Sbjct: 38 VVPGGDGPPRAAEAARLWKEGRS-----PVILVTGD------GDCLSNKRIMVRKGVTPS 86
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD- 205
I +E QS T+QNA+FS+ +++ +Q ++ ++V++ YH +R+ F +A+C
Sbjct: 87 AIFVECQSGSTWQNARFSAPLMREIQARSALIVTNWYHSRRAIASF-------RAACPQM 139
Query: 206 -YLNAYYSIIPLSANFYLT----ELALKEYI 231
++++ F T EL +KEY+
Sbjct: 140 RFISSPIGGDDGRPGFPTTPTDMELVVKEYV 170
>gi|330887933|gb|EGH20594.1| hypothetical protein PSYMO_03468 [Pseudomonas syringae pv. mori
str. 301020]
Length = 256
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 31/196 (15%)
Query: 56 PLLSPQWK---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI---FETMRLYKSCKQ 109
PL QW + + IV+LGNG R P++ + + E +RL +
Sbjct: 67 PLPQQQWATLAQQADAIVVLGNGRE--------RNSPTWGTDTPTGLGLERLRLAARLSK 118
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL-----ETQSLDTFQNAQFS 164
S I+ +GG +E+ + L DD + E S T++NA +
Sbjct: 119 TS-GLPILTTGGLHFDQPPSEASIMAQSL------HDDFGVTARWQEGLSRTTWENATMT 171
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSAN 219
+++++ + K ++LV+ A+H++R++ F+ G ++ +L + +P S
Sbjct: 172 AAVLQPLGIKRVVLVTQAWHMQRARWSFEQAGFTVVSAPVGFLGVDNARPFGGWLPESRV 231
Query: 220 FYLTELALKEYIGILI 235
F + + L E G+L+
Sbjct: 232 FTQSGVLLNEAAGLLV 247
>gi|167957605|ref|ZP_02544679.1| hypothetical protein cdiviTM7_02994 [candidate division TM7
single-cell isolate TM7c]
Length = 204
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ AI + +R E ++LYK + +I SG K G + + L+
Sbjct: 47 VDAIVAVSGGDTDARTDEAVKLYK----NGWSNLLIFSGAAADKTGPSNAKAMRKHALKK 102
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ-HFGINTK 200
GV I +E S T +NA+ S ++ + IILV+SAYH +R+ + F+ G N +
Sbjct: 103 GVPDSAIVIEENSNTTQENARLSRNVFSERKISRIILVTSAYHQRRAGIEFRLAAGGNVE 162
Query: 201 ------ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
A + N ++ +S N + LA+ E I I+ Y +R
Sbjct: 163 VINHPVAQDKQWSNWWW----ISPNGWW--LAMSEIIKIIATYAGASR 204
>gi|226309010|ref|YP_002768970.1| hypothetical protein RER_55230 [Rhodococcus erythropolis PR4]
gi|226188127|dbj|BAH36231.1| hypothetical protein RER_55230 [Rhodococcus erythropolis PR4]
Length = 242
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II SGG P K G+ E+ L+ +GV+ I E S T +NA S+ ++ +
Sbjct: 150 IITSGGAP-KAGVTEARAMREWLVANGVDPGRITEEGTSWSTVENALNSARILADRGATG 208
Query: 176 IILVSSAYHLKRSQLYFQ 193
+++VSSA H++R+ + F+
Sbjct: 209 VVVVSSANHVERAMVDFR 226
>gi|311280166|ref|YP_003942397.1| hypothetical protein Entcl_2865 [Enterobacter cloacae SCF1]
gi|308749361|gb|ADO49113.1| protein of unknown function DUF218 [Enterobacter cloacae SCF1]
Length = 259
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 34/210 (16%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIF 98
LLK ++ Y P W+ + +V+LG G T P PS S R+
Sbjct: 62 LLKPIESRY------PTWRGATPVRYVVVLGGGYTWNPAW-----APSSNLINNSLPRLT 110
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDT 157
E +RL+ Q + +I +G + + ++ + ++ ES GV R I + L+T
Sbjct: 111 EGVRLW----QANPGARLIFTGAAARTNPVSTAEA-GARVAESLGVPRSAIIV----LET 161
Query: 158 FQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAY 210
++ + ++ +K G +LV+SA HL R+ ++F+H G+N + ++ LN +
Sbjct: 162 PKDTEEEAAAVKATVGDAPFLLVTSASHLPRAMIFFRHAGLNPLPAPANQLAIESPLNPW 221
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYRG 240
+IP ++ E +G L + +G
Sbjct: 222 ERMIPSPVWLMHSDRVGYETLGRLWQWLKG 251
>gi|289625792|ref|ZP_06458746.1| hypothetical protein PsyrpaN_11816 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289648423|ref|ZP_06479766.1| hypothetical protein Psyrpa2_11824 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330867188|gb|EGH01897.1| hypothetical protein PSYAE_08002 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330871076|gb|EGH05785.1| hypothetical protein PSYAE_28243 [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 256
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 31/196 (15%)
Query: 56 PLLSPQWK---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI---FETMRLYKSCKQ 109
PL QW + + IV+LGNG R P++ + + E +RL +
Sbjct: 67 PLPQQQWATLAQQADAIVVLGNGRE--------RNSPTWGTDTPTGLGLERLRLAARLSK 118
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL-----ETQSLDTFQNAQFS 164
S I+ +GG +E+ + L DD + E S T++NA +
Sbjct: 119 TS-GLPILTTGGLHFDQPPSEASIMAQSL------HDDFGVTARWQEGLSRTTWENATMT 171
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSAN 219
+++++ + K ++LV+ A+H++R++ F+ G ++ +L + +P S
Sbjct: 172 AAVLQQLGIKRVVLVTQAWHMQRARWSFEKAGFTVVSAPVGFLGVDNARPFGGWLPESRV 231
Query: 220 FYLTELALKEYIGILI 235
F + + L E G+L+
Sbjct: 232 FTQSGVLLNEAAGLLV 247
>gi|299538217|ref|ZP_07051502.1| putative cytoplasmic protein [Lysinibacillus fusiformis ZC1]
gi|298726419|gb|EFI67009.1| putative cytoplasmic protein [Lysinibacillus fusiformis ZC1]
Length = 186
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
H +I+SGG E+ V + L + G++ I +E QS T++N FS ++ +
Sbjct: 70 HVKVIVSGGQGPDEDRTEASVMQDYLEQYGIDATRIIIEDQSTSTYENLVFSKDLLPK-E 128
Query: 173 GKNIILVSSAYHLKRSQ 189
K I +VS+ +HLKR++
Sbjct: 129 TKKITIVSNDFHLKRAK 145
>gi|229167111|ref|ZP_04294854.1| hypothetical protein bcere0007_20770 [Bacillus cereus AH621]
gi|228616345|gb|EEK73427.1| hypothetical protein bcere0007_20770 [Bacillus cereus AH621]
Length = 166
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG + + E+ N L+ G++ + I +E S +T++N +FS + K+
Sbjct: 55 VIVSGGQGEDEDIPEAHSMRNYLMVHGIDENRILIEDCSTNTYENLKFSMDL---YDVKH 111
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSD 205
++VS+ YHL R+++ + GI +A ++
Sbjct: 112 AVVVSNTYHLYRTKIIAKRLGIKMEALAAE 141
>gi|331268940|ref|YP_004395432.1| hypothetical protein CbC4_0755 [Clostridium botulinum BKT015925]
gi|329125490|gb|AEB75435.1| conserved protein [Clostridium botulinum BKT015925]
Length = 262
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+ II+SGG + E+ L+++G+ D I E +S +T +N ++S ++K +
Sbjct: 140 NTKIIVSGGKGPGELITEAEAMKRYLIQNGINHDQIIKEEKSRNTAENFKYSLEILKQRE 199
Query: 173 GKN---IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
K+ + +V++ +H+ R++ + GIN A S Y S P N+Y+ E
Sbjct: 200 KKDNPSVCVVTTDFHMFRAKFLAKRAGINVHAVPS---KGYLSSAP---NYYIRE 248
>gi|300925402|ref|ZP_07141287.1| hypothetical protein HMPREF9548_03480 [Escherichia coli MS 182-1]
gi|301326634|ref|ZP_07219964.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|300418472|gb|EFK01783.1| hypothetical protein HMPREF9548_03480 [Escherichia coli MS 182-1]
gi|300846679|gb|EFK74439.1| conserved hypothetical protein [Escherichia coli MS 78-1]
Length = 259
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ E +G + + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIRQWLKG 251
>gi|295425794|ref|ZP_06818475.1| integral membrane protein [Lactobacillus amylolyticus DSM 11664]
gi|295064487|gb|EFG55414.1| integral membrane protein [Lactobacillus amylolyticus DSM 11664]
Length = 366
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
NG + P + RI + Q F ++ K K II+SGG ++E+
Sbjct: 189 NGERVTPLLAG-RINRAIQ-----FAQKQVDKGRKMPK----IIMSGGRGGDEKISEAQA 238
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHLKRSQL 190
N + G++RDD+ LE +S +T+QN +S + G + S+ YH+ R+ L
Sbjct: 239 MMNYAISRGIKRDDLLLEDKSENTYQNMLYSKRVATKDFGSDKFKAKFFSNNYHIFRAAL 298
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
Y + G+ S + ++L ++E+ G+ +
Sbjct: 299 YAKKVGLRANGVGS-----------YTRFYFLPNAIIREFAGVFV 332
>gi|229029391|ref|ZP_04185475.1| hypothetical protein bcere0028_14820 [Bacillus cereus AH1271]
gi|228731922|gb|EEL82820.1| hypothetical protein bcere0028_14820 [Bacillus cereus AH1271]
Length = 194
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGTT PS+ RI E +S ++ I+SGG
Sbjct: 41 DADYIIVLGSKVNGTT-----------PSYSLQYRIDEAAEYLQSHEK----TIAIVSGG 85
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 86 KGKGEDISEALAMKNGLMKQKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 144
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 145 DFHMFRAK 152
>gi|324113749|gb|EGC07724.1| hypothetical protein ERIG_02167 [Escherichia fergusonii B253]
Length = 259
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPIADHLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++ LN + IP ++ E +G + + +G+
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|293414200|ref|ZP_06656849.1| hypothetical protein ECDG_00753 [Escherichia coli B185]
gi|291434258|gb|EFF07231.1| hypothetical protein ECDG_00753 [Escherichia coli B185]
Length = 259
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLSLLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----DNPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ E +G + + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|254453829|ref|ZP_05067266.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198268235|gb|EDY92505.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 158
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 7/128 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R PS R LY+S H T ++ G +H +E+ V + LL +GV
Sbjct: 13 REGPSPTLRRRTLHAAALYQSG-----HITSLVLCGGVGQHPPSEAAVMQDILLGAGVPM 67
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINTKASC 203
D + LE S T +N +F+ +I +++++ YH R++L + G++ +S
Sbjct: 68 DAMVLEDHSTTTGENIRFARDLIHETDVAIIEVVIITDWYHAPRAKLIARRAGLHATSSS 127
Query: 204 SDYLNAYY 211
A +
Sbjct: 128 PSLRGAKF 135
>gi|327440297|dbj|BAK16662.1| uncharacterized conserved protein [Solibacillus silvestris StLB046]
Length = 190
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 12/124 (9%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I++GG E+ V + L++ GV + I LE QS T++N F+ ++ + +I
Sbjct: 78 IVTGGQGADEDRTEASVMADYLIKHGVAENRISLEDQSTTTYENLLFAKKLLPDNTA-SI 136
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++S+ +HLKR+ + + G+ + + P N T+ ++E + I+ A
Sbjct: 137 TIISNDFHLKRATILARKLGLKA--------DVVAAPTPKVIN---TKSRIRERLAIIKA 185
Query: 237 YYRG 240
Y RG
Sbjct: 186 YTRG 189
>gi|300921042|ref|ZP_07137429.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300412033|gb|EFJ95343.1| conserved hypothetical protein [Escherichia coli MS 115-1]
Length = 259
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGLAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ E +G + + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|163801450|ref|ZP_02195349.1| hypothetical protein 1103602000598_AND4_11294 [Vibrio sp. AND4]
gi|159174939|gb|EDP59739.1| hypothetical protein AND4_11294 [Vibrio sp. AND4]
Length = 365
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P + + E + + Q + I+++GG P+ H E + + L+E G+ +D
Sbjct: 202 LNPDGSMHPILIERLETTLAMAQANPDALIVLTGGVPKNHK-TEGKLMADWLIEKGISKD 260
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
I E + T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 261 RIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFE 307
>gi|302529268|ref|ZP_07281610.1| predicted protein [Streptomyces sp. AA4]
gi|302438163|gb|EFL09979.1| predicted protein [Streptomyces sp. AA4]
Length = 331
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 39/215 (18%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+ LFS++G+ + +L +++ LL P+ D +IVL G+ II R+ P
Sbjct: 128 LALFSYLGF-----LFCCYLGYAFLYSLLPPRSGVD-FVIVL---GSRIIGG----RVPP 174
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGG------DPQKHGLAESIVYNNKLLESGV 143
S R+ + +Y + II SGG +P+ H +AE L G+
Sbjct: 175 LLAS--RLDKAKSVYLAECAAGADPVIIASGGQGPGESEPEAHAMAE------YLRAGGI 226
Query: 144 ERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ E +S T QN +FS M + + G ++V++ +H+ R+ + + G+N + +
Sbjct: 227 PDSALLREDRSKTTEQNLEFSRRLMAERVPGYRCVIVTNNFHVLRTAIIAREAGVNGEVT 286
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S ++++Y ++E++ I + Y
Sbjct: 287 GSR-----------TSSYYWPSATIREFLAIFLRY 310
>gi|254706642|ref|ZP_05168470.1| hypothetical protein BpinM_06564 [Brucella pinnipedialis
M163/99/10]
gi|261314102|ref|ZP_05953299.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261303128|gb|EEY06625.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
Length = 131
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
LL+ G + E +S +T +NA FS ++ + G+ +LV+SAYH+ R+ F+ G
Sbjct: 15 LLDLGFSGNRYIFEGKSRNTVENAIFSQALAQPKPGETWLLVTSAYHMPRAVGCFRKAGF 74
Query: 198 NTKASCSDYLNAYYSIIPL---SANFYLTE--LALKEYIGILIAYYRG 240
+ A DY L S N L+ +AL+E+ G+ ++ G
Sbjct: 75 DVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWTGLAAYWWTG 122
>gi|213966840|ref|ZP_03394991.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|302058769|ref|ZP_07250310.1| hypothetical protein PsyrptK_02187 [Pseudomonas syringae pv. tomato
K40]
gi|302135145|ref|ZP_07261135.1| hypothetical protein PsyrptN_27398 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213928690|gb|EEB62234.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 256
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 110/256 (42%), Gaps = 39/256 (15%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR-----PLLSP 60
+ LI+ +W + R +CF + +P ++ +F+ ++ PL
Sbjct: 19 LLLILGWW---LRRSRPRLATACFAAGLGGLWLMSVPVVV----EFAARKMEQIPPLPQQ 71
Query: 61 QWK---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI---FETMRLYKSCKQHSMHC 114
QW + + IV+LGNG R P++ + + E +RL + S
Sbjct: 72 QWATLAQQADAIVVLGNGRE--------RNSPTWGADTPTGLGLERLRLAARLAKES-GL 122
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKL-ETQSLDTFQNAQFSSSMIKNMQ 172
I+ +GG +E+ + L + GV ++ E S T++NA ++++++
Sbjct: 123 PILTAGGLHFDQPPSEASIMAQALQQDFGV---TVRWQEGLSRTTWENATMTAAVLQPQG 179
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELAL 227
K ++LV+ A+H+ R++ F+ G ++ +L + +P S F + + L
Sbjct: 180 IKRVVLVTQAWHMPRARWSFEQAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLL 239
Query: 228 KEYIGILI--AYYRGN 241
E G+L+ YRG
Sbjct: 240 NEAAGLLVYPWIYRGG 255
>gi|319950302|ref|ZP_08024221.1| integral membrane protein [Dietzia cinnamea P4]
gi|319435994|gb|EFV91195.1| integral membrane protein [Dietzia cinnamea P4]
Length = 210
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 12/126 (9%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G P I P + E +R Q II++GG PQ +G
Sbjct: 82 IVILGAGL-----FPDGGIRPVLE------ERLRTGYRLAQEYPTARIIVTGGVPQ-NGR 129
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ + L +G+ I E S T QNAQF+ + ++ ++V++ H+KR+
Sbjct: 130 TEARAMGDWLRGAGISPLRITEEGSSNSTVQNAQFTDRIFRDRGTTGAVVVTTGDHVKRA 189
Query: 189 QLYFQH 194
L F+
Sbjct: 190 VLNFRQ 195
>gi|293409297|ref|ZP_06652873.1| hypothetical protein ECEG_00230 [Escherichia coli B354]
gi|291469765|gb|EFF12249.1| hypothetical protein ECEG_00230 [Escherichia coli B354]
Length = 259
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 28/199 (14%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIP 215
++ LN + IP
Sbjct: 208 PANQLAIDSPLNPWERAIP 226
>gi|332342362|gb|AEE55696.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 247
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 28/199 (14%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIP 215
++ LN + IP
Sbjct: 208 PANQLAIDSPLNPWERAIP 226
>gi|330960152|gb|EGH60412.1| hypothetical protein PMA4326_16471 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 256
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 97/229 (42%), Gaps = 26/229 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWK---KDGNIIVLLGNGT 76
R CF+L + +P ++ Q PL QW + + IV+LGNG
Sbjct: 31 RPRLAAGCFVLGLGGLWLMSLPVVVEFSARQLEQVPPLPQQQWATLAQQADAIVVLGNGR 90
Query: 77 TIIPTIPAIRIEPSFQSYSRI---FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
R P++ + + E +RL + S I+ +GG +E+ +
Sbjct: 91 E--------RNSPTWGADTPTGLGLERLRLAARLAKES-GLPILTTGGLHFDQPPSEAAI 141
Query: 134 YNNKLLES-GVERDDIKL-ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L + GV ++ E S T++NA ++++++ + K ++LV+ A+H+ R++
Sbjct: 142 MAQSLQQDFGV---TVRWQEGLSRTTWENATLTANVLQPLGIKRVVLVTQAWHMPRARWS 198
Query: 192 FQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILI 235
F+ G + +L + +P S F + + L E G+L+
Sbjct: 199 FEQAGFTVVGAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLV 247
>gi|218661819|ref|ZP_03517749.1| hypothetical protein RetlI_21178 [Rhizobium etli IE4771]
Length = 214
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 18/207 (8%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS-RIFETMR 102
+L++ L+ + +P P+ N+ ++ G + R F + + R E +R
Sbjct: 11 LLMQGLEQRFPKPARDPE-----NMQCMIVLGGAFENEVNTARHSIEFNAAADRFVEALR 65
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES--GVERDDIKLETQSLDTFQN 160
L + Q I++SGGD G+ E ++ G+ +D + E QS TF+N
Sbjct: 66 LAQKFPQ----SRILVSGGDGSLSGIYEGDAAASERFFPLFGIGKDRLIEERQSRTTFEN 121
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-----LNAYYSIIP 215
A + + + + +L++S +H+ RS F+ GI+ +DY +
Sbjct: 122 AVNTKEFLASQGLSHCLLITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRPGLDFTQ 181
Query: 216 LSANFYLTELALKEYIGILIAYYRGNR 242
+ N A++E+ G L+ YY R
Sbjct: 182 PNLNAQNMATAIREWYG-LVGYYLAGR 207
>gi|331011324|gb|EGH91380.1| hypothetical protein PSYTB_16950 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 256
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 31/196 (15%)
Query: 56 PLLSPQWK---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI---FETMRLYKSCKQ 109
PL QW + + IV+LGNG R P++ + + E +RL +
Sbjct: 67 PLPQQQWATLAQQADAIVVLGNGRE--------RNSPTWGTDTPTGLGLERLRLAARLSK 118
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL-----ETQSLDTFQNAQFS 164
S I+ +GG +E+ + L DD + E S T++NA +
Sbjct: 119 TS-GLPILTTGGLHFDQPPSEASIMAQSL------HDDFGVTARWQEGLSRTTWENATMT 171
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSAN 219
+++++ + K ++LV+ A+H++R++ F+ G ++ +L + +P S
Sbjct: 172 AAVLQPLGIKRVVLVTQAWHMQRARWSFEKAGFTVVSAPVGFLGVDNARPFGGWLPESRV 231
Query: 220 FYLTELALKEYIGILI 235
F + + L E G+L+
Sbjct: 232 FTQSGVLLNEAAGLLV 247
>gi|253681527|ref|ZP_04862324.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
gi|253561239|gb|EES90691.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
Length = 255
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+ II+SGG + E+ L+++GV + I E +S T +N ++S ++K +
Sbjct: 133 NTKIIVSGGKGPGELITEAEAMKRYLVKNGVNNNQIIKEEKSRSTGENFKYSLEILKQRE 192
Query: 173 GKNI---ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+NI +V++ +H+ R++ + GIN C+ Y S P N+YL E
Sbjct: 193 KENIPSVCVVTTDFHMFRAEFLAKRIGINV---CAVPSKGYLSSAP---NYYLRE 241
>gi|258511943|ref|YP_003185377.1| hypothetical protein Aaci_1976 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478669|gb|ACV58988.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 199
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
EPS +R+ + LY+ + II+SGG + ++E+ L+ +G+ D
Sbjct: 55 EPSHPLVARLRAAIALYRQGYIRA----IIVSGGQGENETVSEARSMKRFLVMNGIPSDA 110
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ E S +T++N SS+++++ + ++++S YHL R+ + G+
Sbjct: 111 VHEERMSTNTWENLYHSSAIMRDRGYRTAVIITSDYHLPRALAVARMMGMEA 162
>gi|323159547|gb|EFZ45527.1| hypothetical protein ECE128010_4163 [Escherichia coli E128010]
Length = 259
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 28/199 (14%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIP 215
++ LN + IP
Sbjct: 208 PANQLAIDSPLNPWERAIP 226
>gi|300855460|ref|YP_003780444.1| hypothetical protein CLJU_c22840 [Clostridium ljungdahlii DSM
13528]
gi|300435575|gb|ADK15342.1| conserved membrane spanning protein [Clostridium ljungdahlii DSM
13528]
Length = 260
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I SGG + ++E+ L++ GV+ +DI E +S +T +N +++ ++K + G+
Sbjct: 143 VIASGGQGRGEDISEAEAMRIYLVQHGVKNEDIIKEEKSKNTLENMKYTREILKKIDGRE 202
Query: 176 II---LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF-YLTELALKEYI 231
I +V+S +H+ R++ + +G + +P N+ L ++EY
Sbjct: 203 NIQLAVVTSNFHVFRAKFLAKRYGFQVEG------------VPAPVNYLLLPNYCVREYF 250
Query: 232 GILIAY 237
G++ ++
Sbjct: 251 GVVKSF 256
>gi|260584774|ref|ZP_05852519.1| membrane protein [Granulicatella elegans ATCC 700633]
gi|260157431|gb|EEW92502.1| membrane protein [Granulicatella elegans ATCC 700633]
Length = 342
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE-SGVE 144
R+ P + RI + ++ ++ K H +I SGG ++E+ N L+E + V
Sbjct: 180 RVTPLLKK--RIDKAVQAFQQSKNP--HIQLIASGGQGSDEKISEAQAMYNYLVEQTDVP 235
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILVSSAYHLKRSQLYFQHFGINTKA-S 202
++ I LE +S T++N FS + + + + + V++ YH+ R+ Y + G+
Sbjct: 236 KEAILLEDKSTTTYENLLFSKELGEQLVENPRFLFVTNDYHVFRTSTYARQIGMQGDGLG 295
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
CS +A++Y+ ++EY+ + +
Sbjct: 296 CS------------TASYYIPSAFIREYVAMCV 316
>gi|71737332|ref|YP_276508.1| hypothetical protein PSPPH_4392 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557885|gb|AAZ37096.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320322689|gb|EFW78782.1| hypothetical protein PsgB076_22227 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320330526|gb|EFW86505.1| hypothetical protein PsgRace4_08395 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 256
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 31/196 (15%)
Query: 56 PLLSPQWK---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI---FETMRLYKSCKQ 109
PL QW + + IV+LGNG R P++ + + E +RL +
Sbjct: 67 PLPQQQWATLAQQADAIVVLGNGRE--------RNSPTWGTDTPTGLGLERLRLAARLSK 118
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL-----ETQSLDTFQNAQFS 164
S I+ +GG +E+ + L DD + E S T++NA +
Sbjct: 119 TS-GLPILTTGGLHFDQPPSEASIMAQSL------HDDFGVTARWQEGLSRTTWENATMT 171
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSAN 219
+++++ + K ++LV+ A+H++R++ F+ G ++ +L + +P S
Sbjct: 172 AAVLQPLGIKRVVLVTQAWHMQRARWSFEKAGFTVVSAPVGFLGVDNARPFGGWLPESRV 231
Query: 220 FYLTELALKEYIGILI 235
F + + L E G+L+
Sbjct: 232 FTQSGVLLNEAAGLLV 247
>gi|219666444|ref|YP_002456879.1| hypothetical protein Dhaf_0376 [Desulfitobacterium hafniense DCB-2]
gi|219536704|gb|ACL18443.1| protein of unknown function DUF218 [Desulfitobacterium hafniense
DCB-2]
Length = 258
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 91/224 (40%), Gaps = 43/224 (19%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHL---------QFSYQRPLLSPQWK 63
W L R F F L I WGI+ +LL +RP
Sbjct: 49 WGLWGDKFRNTLFSQRFPGLRKLIRWGIV--LLLGSFFIIEGLILWNTEDRRP------- 99
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ G ++++LG G + S+ R+ + + + Q +++SGG
Sbjct: 100 EQGKVLIILGAGLN--------GEQLSWTLRERVDKGVGILAENPQ----MKVVVSGGQG 147
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG----KNIILV 179
+ E+ L+ G+ + I E +S T +N +FS ++ ++G + ++++
Sbjct: 148 PGEWIPEAEAMAQYLIGQGIAPERILKEDRSTSTMENFRFSRVLLDQLEGFDPAEPVLVI 207
Query: 180 SSAYHLKRSQLYFQHFGIN-TKASCSD--------YLNAYYSII 214
+S +H+ RS++ + G+N CS YL Y++++
Sbjct: 208 TSDFHMFRSKILAERNGLNPVGVPCSTPWYIRPNAYLREYFAVV 251
>gi|301023042|ref|ZP_07186851.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|300397248|gb|EFJ80786.1| conserved hypothetical protein [Escherichia coli MS 69-1]
Length = 259
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 28/199 (14%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIP 215
++ LN + IP
Sbjct: 208 PANQLAIDSPLNPWERAIP 226
>gi|228932998|ref|ZP_04095861.1| hypothetical protein bthur0009_14690 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228826599|gb|EEM72370.1| hypothetical protein bthur0009_14690 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 194
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS K+ I+SGG
Sbjct: 41 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHKK----AIAIVSGG 85
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E S T +N +FS +I + K +I V++
Sbjct: 86 KGKGEDISEALAMKNELMKLNIAEDRIIMEDTSTSTDENIKFSKPLIPDNMKKGMI-VTN 144
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 145 DFHMFRAK 152
>gi|218700561|ref|YP_002408190.1| hypothetical protein ECIAI39_2227 [Escherichia coli IAI39]
gi|331672456|ref|ZP_08373246.1| putative KicA protein [Escherichia coli TA280]
gi|218370547|emb|CAR18354.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI39]
gi|331070362|gb|EGI41727.1| putative KicA protein [Escherichia coli TA280]
Length = 259
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 28/199 (14%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIP 215
++ LN + IP
Sbjct: 208 PANQLAIDSPLNPWERAIP 226
>gi|148974941|ref|ZP_01811921.1| hypothetical protein VSWAT3_25489 [Vibrionales bacterium SWAT-3]
gi|145965450|gb|EDK30699.1| hypothetical protein VSWAT3_25489 [Vibrionales bacterium SWAT-3]
Length = 365
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P + + E + + + + I+++GG P+ H E + + L+E GV +D
Sbjct: 202 LNPDGSMHQILIERLETTLAMAKANPDAMIVLTGGVPKNHK-TEGKLMADWLIEKGVSKD 260
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
I E + T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 261 RIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFE 307
>gi|318042858|ref|ZP_07974814.1| hypothetical protein SCB01_14194 [Synechococcus sp. CB0101]
Length = 268
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 17/139 (12%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+ + GDP E++ +E G+ + I +S T + A+ + + +
Sbjct: 131 VTFTAGDPAPP---EALSAQALAIELGMPPERILTNPRSRTTAEEARDIGQLARKRGWRT 187
Query: 176 IILVSSAYHLKRSQLYFQHF-GINTKASCSDY---LNAYY----------SIIPLSANFY 221
++LV+SA+H+ RS FQ G+ DY A Y ++P + +
Sbjct: 188 VLLVTSAFHMPRSLATFQQRSGLRVIPVACDYQLPTRARYGKPTAGSVLKGLVPEAEALH 247
Query: 222 LTELALKEYIGILIAYYRG 240
L+ +ALKE++G+ + RG
Sbjct: 248 LSSVALKEHLGLALYRLRG 266
>gi|193070748|ref|ZP_03051683.1| conserved hypothetical protein [Escherichia coli E110019]
gi|192955941|gb|EDV86409.1| conserved hypothetical protein [Escherichia coli E110019]
Length = 259
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PHEQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++ LN + IP A ++ E +G + + +G+
Sbjct: 208 PANQLAIDSPLNPWERAIPSPAWLMHSDRVGYETLGRIWQWLKGS 252
>gi|148549869|ref|YP_001269971.1| hypothetical protein Pput_4667 [Pseudomonas putida F1]
gi|148513927|gb|ABQ80787.1| protein of unknown function DUF218 [Pseudomonas putida F1]
Length = 253
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 81/179 (45%), Gaps = 23/179 (12%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSF----QSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG G R +P++ Q + E MR + S ++ SGG
Sbjct: 81 DAIVVLGAGRE--------RGDPAWGGSDQPTATALERMRFAARLAKAS-GLPVLTSGGL 131
Query: 123 PQKHGLAESIVYNNKLLES-GVERDDIKL-ETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+E+ + +L E VE +K E S T++NAQ ++ +++ + + ++LV+
Sbjct: 132 HYGTPPSEARLMAERLHEDFAVE---VKWREEASRTTWENAQLTAKVLQPLGFRRVVLVT 188
Query: 181 SAYHLKRSQLYFQHFGINTKAS-----CSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
A+H++RS+ F+ G + D+ + ++P S + + E +G++
Sbjct: 189 QAWHMQRSRWSFEMAGFEVVPAPVGFLGRDHARPFGGLLPESRAMWQSGQLFNEVVGLV 247
>gi|241888952|ref|ZP_04776256.1| integral membrane protein [Gemella haemolysans ATCC 10379]
gi|241864201|gb|EER68579.1| integral membrane protein [Gemella haemolysans ATCC 10379]
Length = 345
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 14/120 (11%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+V+LG G + R+ P S RI + + +YK+ + I+SGG +
Sbjct: 171 VVVLGAG------LIGERVTPLLAS--RIRKGINVYKANPGSKL----IMSGGQGPDEVV 218
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+E+ N E GV+ +DI LE +S T +N FS I K+ +V++ YH+ R+
Sbjct: 219 SEAFAMKNYAFEQGVDENDIILEDKSTSTEENIIFSKKFIP--ADKSFAVVTNYYHVYRA 276
>gi|255023117|ref|ZP_05295103.1| hypothetical protein LmonocyFSL_06015 [Listeria monocytogenes FSL
J1-208]
Length = 189
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+I+SGG AE+ V L+ G+ R I +ET+S T +N ++S+ K
Sbjct: 75 KVNVIVSGGQGADESTAEAEVMEEYLVNEGIARKRIAMETKSKRTEENIKYSNE--KFEL 132
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINT 199
GK +I V+S YH+ R+ + + GI+
Sbjct: 133 GKTVI-VTSDYHMYRALMLAKRQGIDA 158
>gi|328469464|gb|EGF40410.1| hypothetical protein VP10329_11286 [Vibrio parahaemolyticus 10329]
Length = 365
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P + + E + + + + II++GG P+ H E + + L+E GV +D
Sbjct: 202 LNPDGSMHQILVERLETTLAMAKANPDAIIILTGGVPKNHK-TEGKLMADWLIEKGVSKD 260
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
I E + T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 261 RIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFE 307
>gi|270261203|ref|ZP_06189476.1| putative membrane protein [Serratia odorifera 4Rx13]
gi|270044687|gb|EFA17778.1| putative membrane protein [Serratia odorifera 4Rx13]
Length = 257
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 19/182 (10%)
Query: 67 NIIVLLGNGTTIIPT-IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
N IV+LG G T P P+ + S R+ E +RLY + H + G
Sbjct: 80 NYIVVLGGGYTFNPDWAPSSNL--IGNSLPRVTEGVRLYLA---HPGSKMVFTGAGGANT 134
Query: 126 HGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
A + ++ ES GV R D+ L + +DT Q A S ++ + ILV+SA H
Sbjct: 135 LSNAATAA---RVAESLGVPRSDMVLLDRPMDTEQEALQVSKLVGQ---QPFILVTSANH 188
Query: 185 LKRSQLYFQHFGIN------TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
L R+ +F+ G++ + + S LN + ++P + +E A E +G L
Sbjct: 189 LPRAMRFFEAKGLHPIPAPANQLAISSRLNIWDRVVPSAMFLGHSERAWYETLGSLWQSL 248
Query: 239 RG 240
+G
Sbjct: 249 KG 250
>gi|330987615|gb|EGH85718.1| hypothetical protein PLA107_21508 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 256
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 31/196 (15%)
Query: 56 PLLSPQWK---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI---FETMRLYKSCKQ 109
PL QW + + IV+LGNG R P++ + + E +RL +
Sbjct: 67 PLPQQQWATLAQQADAIVVLGNGRE--------RNSPTWGTDTPTGLGLERLRLAARLSK 118
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL-----ETQSLDTFQNAQFS 164
S I+ +GG +E+ + L DD + E S T++NA +
Sbjct: 119 TS-GLPILTTGGLHFDQPPSEASIMAQSL------HDDFGVTARWQEGLSRTTWENATMT 171
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSAN 219
+++++ + K ++LV+ A+H++R++ F+ G ++ +L + +P S
Sbjct: 172 AAVLQPLGIKRVVLVTQAWHMQRARWSFETAGFTVVSAPVGFLGVDNARPFGGWLPESRV 231
Query: 220 FYLTELALKEYIGILI 235
F + + L E G+L+
Sbjct: 232 FTQSGVLLNEAAGLLV 247
>gi|327402034|ref|YP_004342872.1| hypothetical protein Fluta_0024 [Fluviicola taffensis DSM 16823]
gi|327317542|gb|AEA42034.1| protein of unknown function DUF218 [Fluviicola taffensis DSM 16823]
Length = 255
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISG--GDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
RI++T+ LYK+ K I+ISG G GL E+ L++ G+ I ET
Sbjct: 101 DRIWQTISLYKAGKIDR----ILISGDHGYLIDKGLHEATQLKEILVKWGIPEHVIITET 156
Query: 153 QSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+S +T++NA S ++ + I+LV+S H++R++ F G+ +D
Sbjct: 157 KSKNTYENAVESQKIVNRLFPNSNAILLVTSGRHMRRARACFNKLGLKCDTYSTD 211
>gi|304409588|ref|ZP_07391208.1| protein of unknown function DUF218 [Shewanella baltica OS183]
gi|307303946|ref|ZP_07583699.1| protein of unknown function DUF218 [Shewanella baltica BA175]
gi|304352106|gb|EFM16504.1| protein of unknown function DUF218 [Shewanella baltica OS183]
gi|306912844|gb|EFN43267.1| protein of unknown function DUF218 [Shewanella baltica BA175]
Length = 233
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 102 RLYKSCKQHSM--HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL + +Q ++ C +I+SG + ++ + + N +E GV++ I + DT +
Sbjct: 93 RLSEGVRQLNLGQECKLIVSGWGGELTQVSHAEMMANAAVELGVDKRRIIQFPLARDTIE 152
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA- 218
AQ+ + + + LV+SA H+ R+ F G++ +A+ +D++ L+A
Sbjct: 153 EAQY---LQWELGEEPFRLVTSATHMPRAMAIFTAKGLHPEAAATDFIGRDDFWWRLTAD 209
Query: 219 NFYLTELALKEYIGIL 234
N ++ A+ EYIG L
Sbjct: 210 NLVASQRAIHEYIGRL 225
>gi|168209230|ref|ZP_02634855.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
gi|170712695|gb|EDT24877.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
Length = 206
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 102 RLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL + K +H +I+SGG + ES N L+ G+ + I E +S TFQ
Sbjct: 66 RLEEGLKYLELHPNTKVIVSGGQGSNEPIPESEAMKNFLVNKGINPNRIIEEDKSKSTFQ 125
Query: 160 NAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
N +FS ++ ++ +++V+S +HL R++ +DYLN +P
Sbjct: 126 NLEFSKKILEERHADKDEVLIVTSDFHLFRAK------------EIADYLNIKNEGLP 171
>gi|315126918|ref|YP_004068921.1| enzyme [Pseudoalteromonas sp. SM9913]
gi|315015432|gb|ADT68770.1| enzyme [Pseudoalteromonas sp. SM9913]
Length = 258
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 16/191 (8%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL-LSPQWKKDGNIIVLLGNGTTII 79
RK+ M L + + I T L+ +L +P L+ + K NI ++ G I
Sbjct: 37 RKVAIAISLMSLATLL---IASTPLVANLLIKNSQPTSLAFNYLKHPNIDKIVVLGCDIN 93
Query: 80 PTIPAIRIEPSFQ--SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
P PA+ + +R+ E MRL H +I+SGG +K + S +
Sbjct: 94 PN-PALSANSQLGNCALTRLVEGMRLANIYP----HAQLIVSGGGYEK--VTNSALMYKT 146
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+ G+ ++ I ++DT Q A+ +S + + + + LV+S H+ R++ F GI
Sbjct: 147 AISLGINKNRIVQNPNAMDTAQEAKLLASKLVDYK---VALVTSVSHMPRAKNLFNAQGI 203
Query: 198 NTKASCSDYLN 208
N + +DY N
Sbjct: 204 NVIPASTDYHN 214
>gi|322515196|ref|ZP_08068195.1| hypothetical protein HMPREF0027_1947 [Actinobacillus ureae ATCC
25976]
gi|322118806|gb|EFX91007.1| hypothetical protein HMPREF0027_1947 [Actinobacillus ureae ATCC
25976]
Length = 247
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I+++G P + A + K E + LE ++ T +NAQFS M+
Sbjct: 122 ILVTGSSPNGNSEAAMMA---KEFEQFFQVKAKWLEEKAKTTKENAQFSREMLAKEGINK 178
Query: 176 IILVSSAYHLKRSQLYFQHFGI-----NTKASCS--DYLNAYYSIIPLSANFYLTELALK 228
I+LV++ +H+KR+++ F+ G +T A + DY N Y+ +P + ++LK
Sbjct: 179 IVLVTNQWHMKRAKMLFEKQGFEVLPASTGAGVTPEDYYN-YFYYLPQAGALSSVMISLK 237
Query: 229 EYIGIL 234
E++G L
Sbjct: 238 EWMGYL 243
>gi|119358364|ref|YP_913008.1| hypothetical protein Cpha266_2596 [Chlorobium phaeobacteroides DSM
266]
gi|119355713|gb|ABL66584.1| protein of unknown function DUF218 [Chlorobium phaeobacteroides DSM
266]
Length = 250
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGG----DPQKHGLAESIVYNNKLLESGVERDD 147
++ R + L+++ K ++ +GG P + + E + + + + GV +
Sbjct: 96 EAVDRFDGGIELFRAGKAP----LLVFTGGWIPWRPDR--VPEGELLSRRAVLLGVSPEA 149
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I++ + +T + A ++ + G K +ILV+SAYH+ RS L F+ G+ D
Sbjct: 150 IRVTEKVENTAEEAVAVRRLLGSGLGSEKTVILVTSAYHMHRSVLLFRREGLRVIPFPVD 209
Query: 206 YLNA------YYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ S +P + L+E AL+E +G IA+YR
Sbjct: 210 FSFGGPESLTVLSFLPDAGALRLSERALRELLG--IAFYR 247
>gi|302379893|ref|ZP_07268373.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
gi|302312282|gb|EFK94283.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
Length = 308
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 42/198 (21%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY 104
LL +L YQ+ KD + IV+LG I I+ R+
Sbjct: 124 LLGNLIIKYQKS------DKDFDYIVVLGGSMKGIELSELIK--------------QRML 163
Query: 105 KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
S ++ + +I+I G + ES+ N +E+ ++ DI LE +++T QN ++
Sbjct: 164 TSFAYYTTNKSIMIFSGGKSNGDIEESVAMKNFAIENHIQDTDILLEKLAMNTMQNIEYV 223
Query: 165 SSMIK----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF 220
+I+ + + K I ++++ +H R++L +N +S+IP +NF
Sbjct: 224 KKLIQQQDTDFEDKKICVITNNFHAFRTKLICNKMKVN------------WSVIPTQSNF 271
Query: 221 ------YLTELALKEYIG 232
YL EL Y+
Sbjct: 272 NSKISTYLIELLAAIYLD 289
>gi|257125972|ref|YP_003164086.1| hypothetical protein Lebu_1204 [Leptotrichia buccalis C-1013-b]
gi|257049911|gb|ACV39095.1| protein of unknown function DUF218 [Leptotrichia buccalis C-1013-b]
Length = 221
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 13/105 (12%)
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ + +I +GG + +AE + +LL++G+ D I LE +S +T +N +FS I
Sbjct: 75 KKNPEVKVIATGGQGKNENVAEGLAIKRELLKNGISEDRIVLEDKSKNTVENFRFSLEKI 134
Query: 169 KNMQG-------------KNIILVSSAYHLKRSQLYFQHFGINTK 200
KN++ +++V++ YH+ RS+ + G + +
Sbjct: 135 KNIENSKNILNNNKKNQKIKVLIVTNDYHVFRSKNIARKVGFDNE 179
>gi|187778595|ref|ZP_02995068.1| hypothetical protein CLOSPO_02190 [Clostridium sporogenes ATCC
15579]
gi|187772220|gb|EDU36022.1| hypothetical protein CLOSPO_02190 [Clostridium sporogenes ATCC
15579]
Length = 351
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+K + I++LG+G + R+ P S RI + + +YK+ + II +G
Sbjct: 161 RKKYDYIIVLGSG------LIGDRVPPLLAS--RIDKGIEIYKNQLEKGHPSKIIFTGAK 212
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-----NII 177
++E + + G+ + + +E Q+++T++N S +++ G I
Sbjct: 213 GADEKISEGLAMWKYAKDKGIPNEHMIIEDQAVNTYENLSNSKKLLEEDYGTREKQYRCI 272
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+V++ +HL RS ++ + G+ + S Y+S+ L ++EYIG++ Y
Sbjct: 273 VVTNNFHLFRSLIWARIVGLECDGAGSK-TKLYFSLNAL----------IREYIGVMYIY 321
Query: 238 YRGN 241
+ N
Sbjct: 322 KKIN 325
>gi|160916149|ref|ZP_02078356.1| hypothetical protein EUBDOL_02176 [Eubacterium dolichum DSM 3991]
gi|158431873|gb|EDP10162.1| hypothetical protein EUBDOL_02176 [Eubacterium dolichum DSM 3991]
Length = 441
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-K 174
++++GG +K+G E ++ L+E GV + I +ET++ DT NAQ S ++ NM K
Sbjct: 140 VLVTGG-VEKNGWTEGQRMHDWLVEHGVAEERILVETEAADTAGNAQNSFKILYNMPNIK 198
Query: 175 NIILVSSAYHLKRSQLYF 192
I +++S YHLKR + +
Sbjct: 199 TISMITSQYHLKRGTILY 216
>gi|110834807|ref|YP_693666.1| hypothetical protein ABO_1946 [Alcanivorax borkumensis SK2]
gi|110647918|emb|CAL17394.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 203
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 116 IIISGGDPQKHG--LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
++ GG P KH E+ + + L D IK E +S +T++NA +SS ++ +
Sbjct: 78 LVSGGGQPPKHDDEPTEADLMAEQALRRWPRLDVIK-EFRSRNTWENACYSSELLADRGI 136
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
++LVS HL R+ L FQ G+ +A+ S L
Sbjct: 137 DEVLLVSDRAHLPRALLCFQSQGVLAQAAWSKRL 170
>gi|52143746|ref|YP_083083.1| hypothetical protein BCZK1488 [Bacillus cereus E33L]
gi|51977215|gb|AAU18765.1| conserved hypothetical protein [Bacillus cereus E33L]
Length = 192
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 39 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----AIAIVSGG 83
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 84 KGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 142
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 143 DFHMFRAK 150
>gi|90419579|ref|ZP_01227489.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336516|gb|EAS50257.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 263
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 23/209 (11%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
++ L+ + RP L P DG IIVL G T + + + R+ M L
Sbjct: 60 VMTAVLEDRFPRPDLPPA--IDG-IIVLGGAFDTRVARTRGM--NELNDAADRVTAGMEL 114
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-----GVERDDIKLETQSLDTF 158
Q ++ SGG L E + + E+ G+ D + L+ ++ DTF
Sbjct: 115 ----AQRYPKAKLLFSGG---VAALLEEDIPETEAAEALYRGLGLAPDRLLLDGRARDTF 167
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII--PL 216
+NA F+ + + G+ +LV+SA H+ R+ F+ G + DY + P
Sbjct: 168 ENAVFAKELAQPKPGEVWVLVTSASHMPRAVGCFRVAGFDIVPYPVDYRTPSGPALWRPS 227
Query: 217 SA---NFYLTELALKEYIGILIAYYRGNR 242
S N A++EY+G L+AY R
Sbjct: 228 STTTRNLEKVHFAIREYLG-LVAYRLSGR 255
>gi|229102877|ref|ZP_04233571.1| hypothetical protein bcere0019_20290 [Bacillus cereus Rock3-28]
gi|228680550|gb|EEL34733.1| hypothetical protein bcere0019_20290 [Bacillus cereus Rock3-28]
Length = 166
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I+SGG + + E+ L+ G++ I +E +S +T++N +FS +
Sbjct: 53 AKVIVSGGQGEDEDIPEAHSMRIYLMVHGIDESRILMEDRSTNTYENLKFSMDLF---DV 109
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ ++VS+ YHL R+++ + GI +A ++
Sbjct: 110 KHAVVVSNTYHLYRTKIIARRLGIKMEALAAE 141
>gi|317056415|ref|YP_004104882.1| hypothetical protein Rumal_1750 [Ruminococcus albus 7]
gi|315448684|gb|ADU22248.1| protein of unknown function DUF218 [Ruminococcus albus 7]
Length = 252
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
Y++ ++H +++SGG ++E+ L+E G + + +E +S +TF+N +F
Sbjct: 125 YEAMQKHP-DALVVLSGGKGSDEKISEAEGMRRYLVEKGADESRLIMEDKSTNTFENIKF 183
Query: 164 SSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHFG 196
S ++ + G++I +V+ +H R+ L + G
Sbjct: 184 SFAITDKLGCGRDITIVTDGFHQYRASLIAKQEG 217
>gi|15893732|ref|NP_347081.1| hypothetical protein CA_C0441 [Clostridium acetobutylicum ATCC 824]
gi|15023296|gb|AAK78421.1|AE007558_11 Uncharacterized conserved membrane protein of SANA family
[Clostridium acetobutylicum ATCC 824]
gi|325507855|gb|ADZ19491.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
Length = 259
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I++SGG ++E+ L G + D I +E +S +TF+N + S +++ + K
Sbjct: 141 IVVSGGKGNGEDISEAEAMKQYFLNKGFKNDSIIMEDKSKNTFENLRNSKKILEKISNKK 200
Query: 176 II---LVSSAYHLKRSQLYFQHFGI 197
I +V+S+YH+ R++L + G+
Sbjct: 201 EIRVGVVTSSYHITRAKLLGKRVGL 225
>gi|150016674|ref|YP_001308928.1| hypothetical protein Cbei_1801 [Clostridium beijerinckii NCIMB
8052]
gi|149903139|gb|ABR33972.1| protein of unknown function DUF218 [Clostridium beijerinckii NCIMB
8052]
Length = 251
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
Q + I++SGG L ES LL GV+ + + +E S +T +N +FS + I
Sbjct: 125 QEDDYRFIVLSGGQGSDEKLPESHAMKKYLLNRGVDEEKVIIEDNSRNTDENLKFSKAKI 184
Query: 169 KNMQGK-----NIILVSSAYHLKRSQLYFQHFG 196
+ GK NI +V+S +H RS + + G
Sbjct: 185 EENSGKSLDKLNIKIVTSDFHALRSSILAKRNG 217
>gi|331682427|ref|ZP_08383046.1| putative KicA protein [Escherichia coli H299]
gi|331080058|gb|EGI51237.1| putative KicA protein [Escherichia coli H299]
Length = 259
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ + P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPIADRLLRPIENTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++ LN + IP ++ E +G + + +G+
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|227815532|ref|YP_002815541.1| hypothetical protein BAMEG_2945 [Bacillus anthracis str. CDC 684]
gi|229604535|ref|YP_002866117.1| hypothetical protein BAA_1717 [Bacillus anthracis str. A0248]
gi|227002403|gb|ACP12146.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|229268943|gb|ACQ50580.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
Length = 178
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 25 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----AIAIVSGG 69
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 70 KGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 128
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 129 DFHMFRAK 136
>gi|126650479|ref|ZP_01722702.1| hypothetical protein BB14905_07813 [Bacillus sp. B14905]
gi|126592635|gb|EAZ86634.1| hypothetical protein BB14905_07813 [Bacillus sp. B14905]
Length = 191
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS SR+ E + Q +I+SGG ES V + L ++G++ I
Sbjct: 55 PSLSLKSRLEEAVPYLVKYPQ----VKVIVSGGQGPDEDRTESSVMRDYLEQNGIDATRI 110
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E QS T++N FS +I + K I +VS+ +HLKR++
Sbjct: 111 IEEDQSTSTYENLVFSKELIPK-ETKKITIVSNDFHLKRAK 150
>gi|295705080|ref|YP_003598155.1| hypothetical protein BMD_2965 [Bacillus megaterium DSM 319]
gi|294802739|gb|ADF39805.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 187
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 90/187 (48%), Gaps = 24/187 (12%)
Query: 31 LLFSFIGWGIIPTILLKHLQF-SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
++++FIG ++ ++ + + +P+ PQ + + +++LG+ + ++ P
Sbjct: 5 MIYTFIGSLVLYIAIISFYMYQTAHKPV--PQ---NADYVLVLGS------KVDGDQMSP 53
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S + E ++ S Q +I++GG ++E+ L + G++++ I
Sbjct: 54 SLK------ERVKTALSYLQAHQQTKVIVTGGKGSDEEISEAEAAYRFLRKEGIKKNRII 107
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY-----FQHFGINTKASCS 204
E QS TF+N F+ + ++Q K ++LVS+ +HL R+ + F + + K S
Sbjct: 108 KENQSTSTFENFTFTKQKV-DIQHKKVVLVSNDFHLFRASIIAKRQGFDVYPLGAKTPNS 166
Query: 205 DYLNAYY 211
L AY+
Sbjct: 167 IKLQAYF 173
>gi|257420188|ref|ZP_05597182.1| conserved hypothetical protein [Enterococcus faecalis T11]
gi|257162016|gb|EEU91976.1| conserved hypothetical protein [Enterococcus faecalis T11]
Length = 193
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
KQHS +I+SGG E+ V LL GV I LE ++ T +N S +
Sbjct: 74 KQHS-ETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL 132
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ K +++V+S +H+ RSQL + GI+
Sbjct: 133 ---LSFKRLVIVTSDFHMYRSQLLAKRAGIS 160
>gi|49184541|ref|YP_027793.1| hypothetical protein BAS1526 [Bacillus anthracis str. Sterne]
gi|49477297|ref|YP_035830.1| hypothetical protein BT9727_1498 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|165869545|ref|ZP_02214204.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167633396|ref|ZP_02391721.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167639097|ref|ZP_02397370.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170686196|ref|ZP_02877418.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170706539|ref|ZP_02896999.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177650599|ref|ZP_02933566.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190566262|ref|ZP_03019180.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|254683202|ref|ZP_05147063.1| hypothetical protein BantC_05040 [Bacillus anthracis str.
CNEVA-9066]
gi|254723792|ref|ZP_05185578.1| hypothetical protein BantA1_15178 [Bacillus anthracis str. A1055]
gi|254734554|ref|ZP_05192266.1| hypothetical protein BantWNA_05205 [Bacillus anthracis str. Western
North America USA6153]
gi|254740963|ref|ZP_05198651.1| hypothetical protein BantKB_08062 [Bacillus anthracis str. Kruger
B]
gi|254755205|ref|ZP_05207239.1| hypothetical protein BantV_22267 [Bacillus anthracis str. Vollum]
gi|254759741|ref|ZP_05211765.1| hypothetical protein BantA9_15636 [Bacillus anthracis str.
Australia 94]
gi|270000571|ref|NP_844092.2| hypothetical protein BA_1645 [Bacillus anthracis str. Ames]
gi|49178468|gb|AAT53844.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|49328853|gb|AAT59499.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|164714985|gb|EDR20503.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167512887|gb|EDR88260.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167531434|gb|EDR94112.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170128637|gb|EDS97504.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170669893|gb|EDT20634.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172083743|gb|EDT68803.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190562397|gb|EDV16364.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|269850294|gb|AAP25578.2| conserved hypothetical protein [Bacillus anthracis str. Ames]
Length = 192
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 39 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----AIAIVSGG 83
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 84 KGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 142
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 143 DFHMFRAK 150
>gi|293396759|ref|ZP_06641035.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291421023|gb|EFE94276.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 268
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPS----FQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
N IV+LG G T P + PS S R+ E +RLY S M T G
Sbjct: 80 NYIVVLGGGYTFNP-----QWAPSSNLIGNSLPRVTEGVRLYLSHPGAKMVFT-----GA 129
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ L+ + GV R DI + + LDT Q A + ++ + ILV+SA
Sbjct: 130 RGANTLSNAETAARVAASLGVPRSDIVVLDRPLDTEQEAMQVAQLVGK---QRFILVTSA 186
Query: 183 YHLKRSQLYFQHFGIN------TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
HL R+ +F+ G+ + + + LN + ++P + +E A E +G L
Sbjct: 187 NHLPRAMRFFEAQGLQPIPAPANQLAIASPLNIWDRVMPSAMFLGHSERAWYETLGSLWQ 246
Query: 237 YYRG 240
+G
Sbjct: 247 RLKG 250
>gi|152975455|ref|YP_001374972.1| hypothetical protein Bcer98_1670 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152024207|gb|ABS21977.1| protein of unknown function DUF218 [Bacillus cytotoxicus NVH
391-98]
Length = 185
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I+SGG + + E+ N L+ G+ + I +E +S T++N +FS +
Sbjct: 75 IVSGGQGEDEDIPEAHSMRNYLVAHGINANRILIEDRSTSTYENLKFSKDLFHITHA--- 131
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKA 201
I+VS+ YHL R+++ + GI +A
Sbjct: 132 IIVSNTYHLYRTKIIAKRLGIKMEA 156
>gi|269102447|ref|ZP_06155144.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268162345|gb|EEZ40841.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 278
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 23 IFFMSCFMLLFSF---IGWGIIPTILLKHLQFSYQ---RPLLSPQWKKDG---------N 67
I F+ ++L F+ + G I LL L S+Q LL P K++ N
Sbjct: 21 IGFIGLYLLWFTRRKGLAGGFITASLLGILLLSFQPISTSLLRPLEKQNAPFIPHSTPVN 80
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG G I P I + S + R+ E +R+Y+ + + G D
Sbjct: 81 YVMVLGAGHVIDNAFP-ITSQLSRAALMRLVEGIRIYRMYPGSKLILSGYGGGSD----- 134
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++ + + L V + DI L + DT++ A ++S++ + KN++LV+SA H+ R
Sbjct: 135 ISHARMMAKVALALDVNKADILLLETAKDTWEEAFQAASVVGD---KNLVLVTSASHMSR 191
Query: 188 SQLYFQHFGINTKASCSDYL 207
+ F G+N + +++L
Sbjct: 192 ALYEFHQAGLNPIPAPTNFL 211
>gi|219872211|ref|YP_002476586.1| hypothetical protein HAPS_2205 [Haemophilus parasuis SH0165]
gi|219692415|gb|ACL33638.1| conserved hypothetical protein [Haemophilus parasuis SH0165]
Length = 201
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
Y + Q ++I+G P+ G +E+ V K LE LE ++ T +NA+F
Sbjct: 64 YAAFLQKETGLPLLITGSSPK--GTSEAAVMK-KELEQFFHIPTQWLEEKAKTTAENAKF 120
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN--------TKASCSDYLNAYYSIIP 215
S +++ I+LV++ +H++R+++ F+ G K + LN +Y IP
Sbjct: 121 SKPILEKEGINKIVLVTNQWHMQRARMLFEREGFKILPASVGAGKMPETYGLNVFY-FIP 179
Query: 216 LSANFYLTELALKEYIG 232
S + ALKE+IG
Sbjct: 180 QSGALHSNMHALKEWIG 196
>gi|226224989|ref|YP_002759096.1| hypothetical protein Lm4b_02410 [Listeria monocytogenes Clip81459]
gi|254825437|ref|ZP_05230438.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|254853556|ref|ZP_05242904.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|254933133|ref|ZP_05266492.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|255519961|ref|ZP_05387198.1| hypothetical protein LmonocFSL_01797 [Listeria monocytogenes FSL
J1-175]
gi|300765230|ref|ZP_07075215.1| hypothetical protein LMHG_11386 [Listeria monocytogenes FSL N1-017]
gi|225877451|emb|CAS06165.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258606929|gb|EEW19537.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|293584691|gb|EFF96723.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|293594680|gb|EFG02441.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|300514051|gb|EFK41113.1| hypothetical protein LMHG_11386 [Listeria monocytogenes FSL N1-017]
gi|328471359|gb|EGF42256.1| hypothetical protein LM220_10065 [Listeria monocytogenes 220]
gi|332312871|gb|EGJ25966.1| hypothetical protein LMOSA_4070 [Listeria monocytogenes str. Scott
A]
Length = 189
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
++ + +++LG P +P++ ++ + + Y K +I+SGG
Sbjct: 36 ENADTVLILGAKVNGTPAVPSLVLQERLDA---AVAYLNEYPKAK-------VIVSGGQG 85
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E+ V L+ G+ R I+ ET+S T +N ++S++ K GK +I V+S Y
Sbjct: 86 ADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNA--KFNLGKTVI-VTSDY 142
Query: 184 HLKRSQLYFQHFGINT 199
H+ R+ + + GI+
Sbjct: 143 HMYRALMLAKRQGIDA 158
>gi|167757485|ref|ZP_02429612.1| hypothetical protein CLORAM_03035 [Clostridium ramosum DSM 1402]
gi|237735048|ref|ZP_04565529.1| membrane-spanning protein [Mollicutes bacterium D7]
gi|167702482|gb|EDS17061.1| hypothetical protein CLORAM_03035 [Clostridium ramosum DSM 1402]
gi|229381824|gb|EEO31915.1| membrane-spanning protein [Coprobacillus sp. D7]
Length = 351
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGK 174
+++SGG AE++ +E G + I E +S +T +N QFS ++++ G+
Sbjct: 211 LLMSGGQGSDETRAEALAMKEYAIEQGYSEELIITEEKSKNTLENMQFSKAVMEEKSHGE 270
Query: 175 N--IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
N SS+YHL R+ +Y + G+ +A +YL L+EYI
Sbjct: 271 NYKCAYASSSYHLMRAGIYARQVGLIMSGLGGK-----------TAFYYLANAVLREYIA 319
Query: 233 IL 234
L
Sbjct: 320 YL 321
>gi|300117365|ref|ZP_07055155.1| hypothetical protein BCSJ1_00510 [Bacillus cereus SJ1]
gi|298725200|gb|EFI65852.1| hypothetical protein BCSJ1_00510 [Bacillus cereus SJ1]
Length = 192
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 39 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----AIAIVSGG 83
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 84 KGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 142
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 143 DFHMFRAK 150
>gi|218902828|ref|YP_002450662.1| hypothetical protein BCAH820_1711 [Bacillus cereus AH820]
gi|218538682|gb|ACK91080.1| conserved hypothetical protein [Bacillus cereus AH820]
Length = 192
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 39 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----AIAIVSGG 83
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 84 KGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 142
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 143 DFHMFRAK 150
>gi|46908614|ref|YP_015003.1| hypothetical protein LMOf2365_2414 [Listeria monocytogenes serotype
4b str. F2365]
gi|47093642|ref|ZP_00231398.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|46881886|gb|AAT05180.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b
str. F2365]
gi|47017977|gb|EAL08754.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|328465305|gb|EGF36562.1| hypothetical protein LM1816_14015 [Listeria monocytogenes 1816]
Length = 189
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
++ + +++LG P +P++ ++ + + Y K +I+SGG
Sbjct: 36 ENADTVLILGAKVNGTPAVPSLVLQERLDA---AVAYLNEYPKAK-------VIVSGGQG 85
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E+ V L+ G+ R I+ ET+S T +N ++S++ K GK +I V+S Y
Sbjct: 86 ADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNA--KFNLGKTVI-VTSDY 142
Query: 184 HLKRSQLYFQHFGINT 199
H+ R+ + + GI+
Sbjct: 143 HMYRALMLAKRQGIDA 158
>gi|229090673|ref|ZP_04221906.1| hypothetical protein bcere0021_14970 [Bacillus cereus Rock3-42]
gi|228692615|gb|EEL46341.1| hypothetical protein bcere0021_14970 [Bacillus cereus Rock3-42]
Length = 172
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 19 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----AIAIVSGG 63
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 64 KGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 122
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 123 DFHMFRAK 130
>gi|47526931|ref|YP_018280.1| hypothetical protein GBAA_1645 [Bacillus anthracis str. 'Ames
Ancestor']
gi|65318981|ref|ZP_00391940.1| COG1434: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
gi|47502079|gb|AAT30755.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
Length = 172
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 19 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----AIAIVSGG 63
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 64 KGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 122
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 123 DFHMFRAK 130
>gi|113477800|ref|YP_723861.1| hypothetical protein Tery_4400 [Trichodesmium erythraeum IMS101]
gi|110168848|gb|ABG53388.1| protein of unknown function DUF218 [Trichodesmium erythraeum
IMS101]
Length = 273
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 27/196 (13%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSF-QSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IVLLG GTT P +P RI+ ++ RI LYK + II+S G
Sbjct: 81 DEKADAIVLLGQGTTQ-PIVPD-RIQIQLTKTAERITYAAELYK----KGLAPYIIVSAG 134
Query: 122 DPQKHGL----AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KN 175
+ AE I LL V R I +E S +++A + I N +G
Sbjct: 135 PRIGEDINTIEAEDITRVLVLL--NVPRTAIIIEPHSSTVYESA-IETREILNERGLDPT 191
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSD------YLNAYYSII-----PLSANFYLTE 224
+ILVSSA ++R+ L F G+ + +D Y N+ Y + P + LT
Sbjct: 192 VILVSSAIQIRRASLTFTDIGMKVIPAPTDFNTVNPYENSSYRFVLADFFPNTEAISLTT 251
Query: 225 LALKEYIGILIAYYRG 240
+EY+ + + RG
Sbjct: 252 EVWEEYLALFYYFLRG 267
>gi|86146468|ref|ZP_01064791.1| hypothetical protein MED222_12673 [Vibrio sp. MED222]
gi|85835731|gb|EAQ53866.1| hypothetical protein MED222_12673 [Vibrio sp. MED222]
Length = 268
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 25/147 (17%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE---TMRLYKSCKQHSMHCTIIISGGDPQK 125
I++LG+G + IP E S R+ E +RLY K +I+SG
Sbjct: 82 IMVLGSGHVVDDQIPPTS-ELSRTGLMRLSEGIRILRLYPGAK-------LILSG----- 128
Query: 126 HGLAESIVYNNKLLES-----GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+G A + V N K++ GV + DI L + DT++ A+ +++ +KN K ++LV+
Sbjct: 129 YG-AGTEVSNAKMMAKVALALGVAKPDIILLETAKDTWEEARQAAAFVKN---KKMVLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL 207
SA H+ R+ F G+ + ++YL
Sbjct: 185 SASHMTRALNEFNAAGMKPLPAPTNYL 211
>gi|310767187|gb|ADP12137.1| hypothetical protein EJP617_24560 [Erwinia sp. Ejp617]
Length = 262
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 22/176 (12%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
IV+LG G T P + PS S R+ E +R++++ Q +I +G Q
Sbjct: 82 IVVLGGGYTWNP-----QWAPSSNMLNNSLPRLAEGIRIWRANPQ----AKLIFTGSKAQ 132
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ ++ + + + GV I + + DT Q A + ++ N + LV+SA H
Sbjct: 133 HNPMSSAALTASVAQSLGVPATAIIILDKPRDTEQEAHEVAKIVHN---QPFALVTSANH 189
Query: 185 LKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGIL 234
L R+ +FQ+ G+ + ++ LN + ++P S +E A+ E IG L
Sbjct: 190 LPRAIRFFQYEGLQPWPAPANQLAIASPLNFWERVLPSSFWLGHSERAVYENIGRL 245
>gi|238021623|ref|ZP_04602049.1| hypothetical protein GCWU000324_01525 [Kingella oralis ATCC 51147]
gi|237866237|gb|EEP67279.1| hypothetical protein GCWU000324_01525 [Kingella oralis ATCC 51147]
Length = 213
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K + V+LG P R RI + LY+S + + I +GG
Sbjct: 44 KHADAAVVLGAAAWGDKPSPVFR--------ERINHAIALYQSERVEKL----IFTGGTR 91
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
++ +E V L+ G+ DI ET+S DT+QN + +++ + ++I+VS Y
Sbjct: 92 KEGYPSEGEVARKFALKQGIPSHDIIYETRSKDTYQNLVNTRLLMQKHKLHHVIIVSDPY 151
Query: 184 HLKRSQLYFQHFGINTKASCS 204
H+ R+ + GI S +
Sbjct: 152 HMARAIAIARDLGIPATPSPT 172
>gi|89893171|ref|YP_516658.1| hypothetical protein DSY0425 [Desulfitobacterium hafniense Y51]
gi|89332619|dbj|BAE82214.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 257
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 92/218 (42%), Gaps = 31/218 (14%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL---SPQWKKDGNII 69
W L R F F L I WGI+ LL F + +L + + G ++
Sbjct: 48 WGLWGDKSRNTLFSQRFPGLRKLIRWGIV---LLLGSFFIIEGLILWNTEDRIPEQGKVL 104
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG G + S+ R+ + + + Q +++SGG +
Sbjct: 105 IILGAGLN--------GEQLSWTLRERVDKGVGILAENPQ----MKVVVSGGQGPGEWIP 152
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG----KNIILVSSAYHL 185
E+ L+ G+ + I E +S T +N +FS ++ ++G + +++++S +H+
Sbjct: 153 EAEAMAQYLIGQGIAPERILKEDRSTSTMENFRFSRVLLDQLEGFDPAEPVLVITSDFHM 212
Query: 186 KRSQLYFQHFGIN-TKASCSD--------YLNAYYSII 214
RS++ + G+N CS YL Y++++
Sbjct: 213 FRSKILAERNGLNPVGVPCSTPWYIRPNAYLREYFAVV 250
>gi|84385174|ref|ZP_00988206.1| hypothetical protein V12B01_15926 [Vibrio splendidus 12B01]
gi|84379771|gb|EAP96622.1| hypothetical protein V12B01_15926 [Vibrio splendidus 12B01]
Length = 365
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+ + +L L+ S + LLS D IV LG ++ I IE R+
Sbjct: 169 FATVDRVLETPLKESADKGLLS-----DHGAIVTLGYALNPDGSMHEILIE-------RL 216
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
T+ + K+ I+++GG P+ H E + + L+ GV +D I E + T
Sbjct: 217 ETTLAMSKANPD----AMIVLTGGVPKNHK-TEGKLMADWLISKGVSKDRIIEENYATST 271
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
NA FSS + K+ ++SSA H++R Q F+
Sbjct: 272 VGNALFSSYALARHDIKHATIISSASHVRRGQTLFE 307
>gi|167755531|ref|ZP_02427658.1| hypothetical protein CLORAM_01045 [Clostridium ramosum DSM 1402]
gi|237734279|ref|ZP_04564760.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|167704470|gb|EDS19049.1| hypothetical protein CLORAM_01045 [Clostridium ramosum DSM 1402]
gi|229382509|gb|EEO32600.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 406
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-K 174
I+++GG +K+G E ++ L+E GV + I +E +S +T QNA+FS ++ N K
Sbjct: 138 ILVTGG-VKKNGWTEGDRMHDWLVEHGVADNRILVENKSANTAQNAEFSFDILYNHPTIK 196
Query: 175 NIILVSSAYHLKRSQLYF 192
+I +++S YHLKR + +
Sbjct: 197 SISMITSQYHLKRGTILY 214
>gi|86145789|ref|ZP_01064118.1| hypothetical protein MED222_04000 [Vibrio sp. MED222]
gi|85836488|gb|EAQ54617.1| hypothetical protein MED222_04000 [Vibrio sp. MED222]
Length = 365
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+ + +L L+ S + LLS D IV LG ++ I IE R+
Sbjct: 169 FATVDRVLETPLKESADKGLLS-----DHGAIVTLGYALNPDGSMHEILIE-------RL 216
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
T+ + K+ I+++GG P+ H E + + L+ GV +D I E + T
Sbjct: 217 ETTLAMSKANPD----AMIVLTGGVPKNHK-TEGKLMADWLISKGVSKDRIIEENYATST 271
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
NA FSS + K+ ++SSA H++R Q F+
Sbjct: 272 VGNALFSSYALARHDIKHATIISSASHVRRGQTLFE 307
>gi|114320844|ref|YP_742527.1| hypothetical protein Mlg_1691 [Alkalilimnicola ehrlichii MLHE-1]
gi|114227238|gb|ABI57037.1| protein of unknown function DUF218 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 204
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS RI + LY++ + +I +GG LAES+ L G+ +D
Sbjct: 45 PSPVLRERIHHALSLYEAGQVD----LLIFTGGQAPGEPLAESVAAARYALARGLAAEDA 100
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
E S DT+ N + +++++ +++VS HL+R+ + G++
Sbjct: 101 YCEVASADTWNNLRGAAAVVAEHDLGRVLVVSDPLHLRRAVAMARDLGLDA 151
>gi|296110233|ref|YP_003620614.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154]
gi|295831764|gb|ADG39645.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154]
Length = 314
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG + L E+ + GV DI +E QS +T+QN FS +++ G N
Sbjct: 180 LIMSGGQGKDELLPEAEAMKAYAIMHGVAESDILVENQSKNTYQNMLFSKQVVEK-NGFN 238
Query: 176 I---ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+ I ++ YH+ R+ + G+N + S ++ ++L ++EYI
Sbjct: 239 LQKGIFATNDYHVFRAAGFAHLVGLNIEGIGSK-----------TSKYFLPNALIREYIA 287
Query: 233 IL 234
IL
Sbjct: 288 IL 289
>gi|294499692|ref|YP_003563392.1| hypothetical protein BMQ_2936 [Bacillus megaterium QM B1551]
gi|294349629|gb|ADE69958.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 187
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
Q +I++GG ++E+ L + G++++ I E QS TF+N F+ +
Sbjct: 67 QAHQQTKVIVTGGKGSDEEISEAEAAYRFLRKEGIKKNRIIKEDQSTSTFENFTFTKQKV 126
Query: 169 KNMQGKNIILVSSAYHLKRSQLY-----FQHFGINTKASCSDYLNAYY 211
++Q K ++LVS+ +HL R+ + F + + K S L AY+
Sbjct: 127 -DIQHKKVVLVSNDFHLFRASIIAKRQGFDVYPLGAKTPNSIKLQAYF 173
>gi|228914293|ref|ZP_04077908.1| hypothetical protein bthur0012_15250 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228926749|ref|ZP_04089817.1| hypothetical protein bthur0010_14650 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|229121266|ref|ZP_04250497.1| hypothetical protein bcere0016_15720 [Bacillus cereus 95/8201]
gi|228662111|gb|EEL17720.1| hypothetical protein bcere0016_15720 [Bacillus cereus 95/8201]
gi|228832862|gb|EEM78431.1| hypothetical protein bthur0010_14650 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228845287|gb|EEM90323.1| hypothetical protein bthur0012_15250 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 159
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 6 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----AIAIVSGG 50
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 51 KGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 109
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 110 DFHMFRAK 117
>gi|225377113|ref|ZP_03754334.1| hypothetical protein ROSEINA2194_02758 [Roseburia inulinivorans DSM
16841]
gi|225211018|gb|EEG93372.1| hypothetical protein ROSEINA2194_02758 [Roseburia inulinivorans DSM
16841]
Length = 249
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 36/218 (16%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W + Q +R IF + C + SF+ +I +++ + Q +K+ + +++L
Sbjct: 56 WDRIPQIVRWIFGILCGIFFLSFL---VIEGMVIHQMH---------AQGEKNLDYVIVL 103
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G + A + PS R+ E + LY + + I++GG + +E+
Sbjct: 104 G------AQVHADK--PSVVLKYRLDEAI-LYLN---ENPETVCIVAGGQGKNEPYSEAY 151
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
L+++G+++D I LE QS T +N ++S + +G + ++++ +H+ F
Sbjct: 152 GMAQYLMQNGIDKDRILLEDQSKTTEENLRYSRKFLP--EGAKVGIITNDFHM------F 203
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ I K SD I S FYL L+EY
Sbjct: 204 RALQIAKKQGLSDVC----GIAADSTKFYLPNNMLREY 237
>gi|116334676|ref|YP_796203.1| hypothetical protein LVIS_2118 [Lactobacillus brevis ATCC 367]
gi|116100023|gb|ABJ65172.1| hypothetical protein LVIS_2118 [Lactobacillus brevis ATCC 367]
Length = 357
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 72/184 (39%), Gaps = 25/184 (13%)
Query: 60 PQWKKDGNIIVLLG--NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P++ +D I++ G NG + P + RI+ + Y K + +I
Sbjct: 171 PRYNQDFLIVLGAGLLNGNEVSPLL-GRRIDRALTFYR---------KQLAKTGQAPMVI 220
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--NMQGKN 175
SGG + E + + G+ + +E QS T++N FS +I Q
Sbjct: 221 FSGGQGGDETVPEGRAMRDYAIAHGLPAEQALVEDQSKTTYENMVFSKQLIAATGQQRPR 280
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ V++ YH R+ + + G+ + +A F+L L+EYI I +
Sbjct: 281 VTFVTNGYHTFRAGMIARKAGLKANGIGAH-----------TAKFFLPNAILREYIAIFV 329
Query: 236 AYYR 239
R
Sbjct: 330 GNKR 333
>gi|312793878|ref|YP_004026801.1| hypothetical protein Calkr_1698 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181018|gb|ADQ41188.1| protein of unknown function DUF218 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 195
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 13/142 (9%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+S + KK IIVL G + P+ P F+ R+ LYK K ++ + II
Sbjct: 31 ISSKPKKSDCIIVL---GCAVYGDFPS----PFFRE--RLNRAFELYK--KGYARY--II 77
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+ G ++E+ L+E GV + I E +S T++N +S ++ K+ I
Sbjct: 78 VCGAKGPGENISEAEAGKRYLVERGVLPELILKEDKSFSTYENLLYSKKIMNKKGFKSTI 137
Query: 178 LVSSAYHLKRSQLYFQHFGINT 199
+VS+ +HL+R+ L + +N
Sbjct: 138 IVSNMFHLRRASLIAKKLKMNA 159
>gi|304404431|ref|ZP_07386092.1| protein of unknown function DUF218 [Paenibacillus curdlanolyticus
YK9]
gi|304346238|gb|EFM12071.1| protein of unknown function DUF218 [Paenibacillus curdlanolyticus
YK9]
Length = 230
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 76/187 (40%), Gaps = 17/187 (9%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTIL----LKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ R+ S +LLF + W I+ +L L L +RPL P+ ++I++
Sbjct: 6 MGSGARRRRKRSPLLLLFRIVAWMIVLGVLWCGYLLWLINDVKRPL--PRSLPKADVIIV 63
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG P ++ R+ LYK K + I+ G D + E+
Sbjct: 64 LGAALWSDKPSPGLK--------ERLDYAFGLYKLGKADKL---ILTGGLDGNGSTITEA 112
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L G+ D + +E ++ T++N FS + K +++V+ YH R+
Sbjct: 113 EGMRRYLTARGIPNDKLLIENKATSTYENLLFSKQITDRGGMKQVLIVTHDYHSSRAAEI 172
Query: 192 FQHFGIN 198
++ G N
Sbjct: 173 ARYVGFN 179
>gi|300869552|ref|ZP_07114133.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300332420|emb|CBN59331.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 351
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG---DPQK 125
IVL+G GTT P IP + RI RLY+ H + +I+S G D +
Sbjct: 168 IVLVGQGTTE-PKIPYRTQIQLTDAGDRIAYAARLYR----HGLAPYLIVSAGYRPDLEG 222
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILVSSAYH 184
H L E+ L++ GV +DI LET+S + ++A + ++ N G IILV+SA
Sbjct: 223 HVL-EAADVKRLLVKMGVLPEDIILETKSKNLHESAIQTRIILNNKGLGDRIILVTSAIQ 281
Query: 185 LKRSQLYFQHFGINTKASCSDY 206
+ R+ F + + +D+
Sbjct: 282 MGRATRTFIKEKMRVSPAPTDF 303
>gi|229491563|ref|ZP_04385384.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229321244|gb|EEN87044.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length = 140
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
II SGG P K G+ E+ L+ +GV I E S T +NA S+ ++ +
Sbjct: 45 QSPIITSGGAP-KAGVTEARAMREWLVANGVNPGRITEEGTSWSTVENAINSARILADRG 103
Query: 173 GKNIILVSSAYHLKRSQLYFQ 193
+++VSSA H++R+ + F+
Sbjct: 104 ATGVVVVSSANHVERAMVDFR 124
>gi|330448460|ref|ZP_08312108.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492651|dbj|GAA06605.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 365
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P + + E + + + + I+++GG P H E + + L+E G+ +D
Sbjct: 202 LNPDGSMHPILVERLETTLAMAKANPDALIVLTGGVPMNHK-TEGKLMADWLIEKGINKD 260
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
I E + T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 261 RIIEENYATSTVDNALFSSYALARHHIKHATIISSASHVRRGQTLFE 307
>gi|168216315|ref|ZP_02641940.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
gi|182625617|ref|ZP_02953387.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|177909169|gb|EDT71640.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|182381802|gb|EDT79281.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
Length = 206
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 102 RLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL + K +H +I+SGG + ES N L+ G+ + I E +S TFQ
Sbjct: 66 RLEEGLKYLELHPNTKVIVSGGQGSNEPIPESEAMKNFLVNKGINPNRIIEEDKSKSTFQ 125
Query: 160 NAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
N +FS ++ ++ +++V+S +HL R++ +DYLN +P
Sbjct: 126 NLEFSKKILEERHADKDEVLIVTSDFHLFRAK------------EIADYLNIKNEGLP 171
>gi|47566094|ref|ZP_00237132.1| uncharacterized conserved membrane protein of SANA family CAC0441
[Bacillus cereus G9241]
gi|47557011|gb|EAL15341.1| uncharacterized conserved membrane protein of SANA family CAC0441
[Bacillus cereus G9241]
Length = 192
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 39 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----AIAIVSGG 83
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 84 KGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 142
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 143 DFHMFRAK 150
>gi|326692926|ref|ZP_08229931.1| membrane protein [Leuconostoc argentinum KCTC 3773]
Length = 316
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 107 CKQHSMHCTIIISGG--DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
K+ S I+ SGG D Q+ A ++ + +L GV +LE QS +T QN ++S
Sbjct: 176 AKKMSPFPIIVFSGGQGDDQRRSEAAAM-REHAVLRYGVPLAQTRLEDQSRNTIQNFRYS 234
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+++ + G+ + +S YH+ R L Q GI+ +
Sbjct: 235 AAL---LDGQPLTFYTSDYHVFRGALIAQTLGISARG 268
>gi|312877810|ref|ZP_07737760.1| protein of unknown function DUF218 [Caldicellulosiruptor
lactoaceticus 6A]
gi|311795436|gb|EFR11815.1| protein of unknown function DUF218 [Caldicellulosiruptor
lactoaceticus 6A]
Length = 195
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 13/145 (8%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+S + KK IIVL G + P+ P F+ R+ LYK K ++ + II
Sbjct: 31 ISSKPKKSDCIIVL---GCAVYGDFPS----PFFRE--RLNRAFELYK--KGYARY--II 77
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+ G ++E+ L+E GV + I E +S T++N +S ++ K+ I
Sbjct: 78 VCGAKGPGENISEAEAGKRYLVERGVLPELILKEDKSFSTYENLLYSKRIMNKKGFKSAI 137
Query: 178 LVSSAYHLKRSQLYFQHFGINTKAS 202
+VS+ +HL+R+ L + +N S
Sbjct: 138 IVSNMFHLRRASLIAKKLKMNASFS 162
>gi|169342569|ref|ZP_02863622.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
gi|169299341|gb|EDS81408.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
Length = 206
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 102 RLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL + K +H +I+SGG + ES N L+ G+ + I E +S TFQ
Sbjct: 66 RLEEGLKYLELHPNTKVIVSGGQGSNEPIPESEAMKNFLVNKGINPNRIIEEDKSKSTFQ 125
Query: 160 NAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
N +FS ++ ++ +++V+S +HL R++ +DYLN +P
Sbjct: 126 NLEFSKKILEERHADKDEVLIVTSDFHLFRAK------------EIADYLNIKNEGLP 171
>gi|110800413|ref|YP_695257.1| hypothetical protein CPF_0806 [Clostridium perfringens ATCC 13124]
gi|110675060|gb|ABG84047.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
Length = 206
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 102 RLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL + K +H +I+SGG + ES N L+ G+ + I E +S TFQ
Sbjct: 66 RLEEGLKYLELHPNTKVIVSGGQGSNEPIPESEAMKNFLVNKGINPNRIIEEDKSKSTFQ 125
Query: 160 NAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
N +FS ++ ++ +++V+S +HL R++ +DYLN +P
Sbjct: 126 NLEFSKKILEERHADKDEVLIVTSDFHLFRAK------------EIADYLNIKNEGLP 171
>gi|90414649|ref|ZP_01222621.1| hypothetical protein P3TCK_09293 [Photobacterium profundum 3TCK]
gi|90324282|gb|EAS40854.1| hypothetical protein P3TCK_09293 [Photobacterium profundum 3TCK]
Length = 343
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 21/111 (18%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II++GG K G ES L+E GV +D + E ++ +T NA+ S +++ +
Sbjct: 204 IIVTGG-LAKAGQTESSAMKTWLVEQGVNKDRVIEENKATNTIDNARLSLALLNKYNIQA 262
Query: 176 IILVSSAYHLKRSQLYFQ--------------------HFGINTKASCSDY 206
LVS++ H+ RS + F H +N K S SD+
Sbjct: 263 ATLVSASIHVHRSHILFDVLHWQNNLQNNKITQSITFSHVAVNDKLSTSDF 313
>gi|312127289|ref|YP_003992163.1| hypothetical protein Calhy_1067 [Caldicellulosiruptor
hydrothermalis 108]
gi|311777308|gb|ADQ06794.1| protein of unknown function DUF218 [Caldicellulosiruptor
hydrothermalis 108]
Length = 195
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 13/145 (8%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+S + KK IIVL G + P+ P F+ R+ LYK K ++ + II
Sbjct: 31 ISAKPKKSDCIIVL---GCAVYGDFPS----PFFRE--RLNRAFELYK--KGYARY--II 77
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+ G ++E+ L+ESGV + + E +S T++N + ++ K+ I
Sbjct: 78 VCGAKGPGENISEAEAGKRYLVESGVLPEFVLKEDKSFSTYENLLHAKRIMNKKGFKSAI 137
Query: 178 LVSSAYHLKRSQLYFQHFGINTKAS 202
+VS+ +HL+R+ L + IN+ S
Sbjct: 138 IVSNMFHLERAHLIAKKLKINSSFS 162
>gi|126173714|ref|YP_001049863.1| hypothetical protein Sbal_1476 [Shewanella baltica OS155]
gi|125996919|gb|ABN60994.1| protein of unknown function DUF218 [Shewanella baltica OS155]
Length = 248
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 102 RLYKSCKQHSM--HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL + +Q ++ C +I+SG + ++ + + N +E GV++ I + DT +
Sbjct: 108 RLSEGVRQLNLGQECKLIVSGWGGELTQVSHAEMMANAAVELGVDKRRIIQFPLARDTIE 167
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA- 218
AQ+ + + + LV+SA H+ R+ F G++ +A+ +D++ L+A
Sbjct: 168 EAQY---LQWELGEEPFRLVTSATHMPRAMAIFTAKGLHPEAAPTDFIGRDDFWWRLTAD 224
Query: 219 NFYLTELALKEYIGIL 234
N ++ A+ EYIG L
Sbjct: 225 NLVASQRAIHEYIGRL 240
>gi|218709086|ref|YP_002416707.1| hypothetical protein VS_1092 [Vibrio splendidus LGP32]
gi|218322105|emb|CAV18210.1| Hypothetical protein VS_1092 [Vibrio splendidus LGP32]
Length = 301
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 25/147 (17%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE---TMRLYKSCKQHSMHCTIIISGGDPQK 125
I++LG+G + IP E S R+ E +RLY K +I+SG
Sbjct: 115 IMVLGSGHVVDDQIPPTS-ELSRTGLMRLSEGIRILRLYPGAK-------LILSG----- 161
Query: 126 HGLAESIVYNNKLLES-----GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+G A + V N K++ GV + DI L + DT++ A+ +++ +KN K ++LV+
Sbjct: 162 YG-AGTEVSNAKMMAKVALALGVAKPDIILLETAKDTWEEARQAAAFVKN---KKMVLVT 217
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL 207
SA H+ R+ F G+ + ++YL
Sbjct: 218 SASHMTRALNEFNAAGMKPLPAPTNYL 244
>gi|325267121|ref|ZP_08133790.1| protein of hypothetical function DUF218 [Kingella denitrificans
ATCC 33394]
gi|324981474|gb|EGC17117.1| protein of hypothetical function DUF218 [Kingella denitrificans
ATCC 33394]
Length = 213
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 12/142 (8%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY++ + I +GG P+ E+ V N L+ G+
Sbjct: 60 RPSPVFRE--RINHALTLYQTGYVRKL----IFTGGTPKSGYETEAEVARNFALKQGIPE 113
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS--- 202
DI +E +S DT+QN + +++ +I+++S H+ R+ + I S
Sbjct: 114 QDILIEMRSKDTYQNLVNTRFLMQKHHLHDIVIISDPLHIARAMAIAEDLDIKANYSPTP 173
Query: 203 CSDYLNAYYSIIPLSANFYLTE 224
S Y NA + A F++ E
Sbjct: 174 TSRYHNASWQT---QAAFFIQE 192
>gi|300854922|ref|YP_003779906.1| hypothetical protein CLJU_c17410 [Clostridium ljungdahlii DSM
13528]
gi|300435037|gb|ADK14804.1| uncharacterized conserved membrane protein [Clostridium ljungdahlii
DSM 13528]
Length = 204
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 22/159 (13%)
Query: 56 PLL---SPQ--WKKDG-NIIVLLGNGTTIIPTIPAIRI-EPSFQSYSRIFETMRLYKSCK 108
PLL SP+ K+D ++I++LG PA++ +PS R+ + + L+
Sbjct: 32 PLLFYKSPETKLKRDRYDVIIILG--------FPALQDGKPSPIMRERVIKAVELFNKGY 83
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSM 167
+++ C SGG + I+ N ES G+ + E +S +T+QN Q S +
Sbjct: 84 ANNIIC----SGGGVYNKYIEADIMAN--FAESLGIPNSCLIREDKSRNTYQNIQNSIKI 137
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+++ + + ++V+S +HL+RS + F I + SDY
Sbjct: 138 MEDKKWSSAMIVTSPWHLRRSNYFLSKFNITYQMEKSDY 176
>gi|89053049|ref|YP_508500.1| hypothetical protein Jann_0558 [Jannaschia sp. CCS1]
gi|88862598|gb|ABD53475.1| protein of unknown function DUF218 [Jannaschia sp. CCS1]
Length = 153
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
L+ + H ++I G + E+ L ++GV D I+LE S +T +N +
Sbjct: 25 LHGAALFHGGRGDVVIPCGGLGRFPPTEAEAMAALLRDAGVPEDRIRLERTSTNTVENIR 84
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ ++ + +++VS AYHL R++L + G+ S A
Sbjct: 85 HALPLLAGE--RCVLIVSDAYHLPRARLIARREGLEVSVSAPPLTGA 129
>gi|269959273|ref|ZP_06173657.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835975|gb|EEZ90050.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 365
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P + + E + + + + I+++GG P+ H E + + L+E G+ +D
Sbjct: 202 LNPDGSMHQILVERLETTLAMAKANPDALIVLTGGVPKNHK-TEGKLMADWLIEKGISKD 260
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
I E + T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 261 RIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFE 307
>gi|168186754|ref|ZP_02621389.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
gi|169295259|gb|EDS77392.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
Length = 253
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
+ R E +R Y S K +I+SGG + E+ L+E+GV+ I E
Sbjct: 117 ERVDRSLEYLREYPSTK-------VIVSGGKGPGEFITEAEAMKRYLVENGVKNSQIIKE 169
Query: 152 TQSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFGI 197
S T +N ++SS +I+NM + + +V++ +H+ R+++ + G+
Sbjct: 170 ENSRTTAENFKYSSKIIENMDKERTPTVSVVTTNFHMLRAKMLAKRSGL 218
>gi|324325732|gb|ADY20992.1| hypothetical protein YBT020_08730 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 192
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 39 EADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----AIAIVSGG 83
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N L++ +E D I +E +S T +N +FS +I + K +I V++
Sbjct: 84 KGKGEDISEALAMKNGLMKLKIEEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 142
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 143 DFHMFRAK 150
>gi|91223050|ref|ZP_01258316.1| hypothetical protein V12G01_04386 [Vibrio alginolyticus 12G01]
gi|91191863|gb|EAS78126.1| hypothetical protein V12G01_04386 [Vibrio alginolyticus 12G01]
Length = 365
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P + + E + + + + I+++GG P+ H E + + L+E G+ +D
Sbjct: 202 LNPDGSMHQILVERLETTLAMAKANPDALIVLTGGVPKNHK-TEGKLMADWLIEKGISKD 260
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
I E + T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 261 RIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFE 307
>gi|323947291|gb|EGB43299.1| hypothetical protein EREG_01236 [Escherichia coli H120]
Length = 259
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 28/225 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PHEQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++ LN + IP ++ E +G + + +G+
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDCVGYETLGRIWQWLKGS 252
>gi|301053252|ref|YP_003791463.1| hypothetical protein BACI_c16640 [Bacillus anthracis CI]
gi|300375421|gb|ADK04325.1| putative membrane protein [Bacillus cereus biovar anthracis str.
CI]
Length = 179
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 39 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----AIAIVSGG 83
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 84 KGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 142
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 143 DFHMFRAK 150
>gi|260597320|ref|YP_003209891.1| hypothetical protein CTU_15280 [Cronobacter turicensis z3032]
gi|260216497|emb|CBA29665.1| Uncharacterized protein ycbC [Cronobacter turicensis z3032]
Length = 230
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 33/209 (15%)
Query: 45 LLKHLQFSYQRPLLSPQWK-KDGNIIVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIFE 99
LLK ++ Y P W + + IV+LG G T + PS S R+ E
Sbjct: 33 LLKPVEDDY------PTWNGQKADYIVVLGGGYTW-----NDKWAPSSNLVNNSLPRVTE 81
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTF 158
+RL+ + + T + +P A + ++ ES GV R DI +LDT
Sbjct: 82 GVRLWLANPGAKLVFTGARATTNPVSTAEAGA-----RVAESLGVPRSDI----ITLDTP 132
Query: 159 QNAQFSSSMIKNMQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYY 211
++ + ++ + GK +LV+SA HL R+ ++F+ G+N + ++ LN +
Sbjct: 133 KDTEEEATAVAGALGKEPFLLVTSASHLPRAMIFFKRQGLNPIPAPANQMAIDSPLNPWE 192
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYRG 240
+ P S +E A E +G + +G
Sbjct: 193 RVYPSSLWLMHSERAGYELLGRAWQWVKG 221
>gi|153832603|ref|ZP_01985270.1| transporter [Vibrio harveyi HY01]
gi|148871169|gb|EDL70047.1| transporter [Vibrio harveyi HY01]
Length = 365
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P + + E + + + + I+++GG P+ H E + + L+E G+ +D
Sbjct: 202 LNPDGSMHQILVERLETTLAMAKANPDALIVLTGGVPKNHK-TEGKLMADWLIEKGISKD 260
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
I E + T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 261 RIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFE 307
>gi|254451471|ref|ZP_05064908.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198265877|gb|EDY90147.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 201
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ + IV +G + T+ A + +R+ ++L+++ + II SGG
Sbjct: 21 QSADAIVCMGGSMSADGTLAA-------STLTRVERCVQLFEA----GLAPVIIFSGGIA 69
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ G + + GV +D + E + T QNA FS +I N + II+V+ A+
Sbjct: 70 RPTGPSAGAQMGRFAMTLGVPQDGVIAEGLAQSTLQNALFSLPLIPN--AERIIIVTEAF 127
Query: 184 HLKRSQLYFQ 193
HL RS F+
Sbjct: 128 HLPRSWASFR 137
>gi|156975997|ref|YP_001446903.1| hypothetical protein VIBHAR_04767 [Vibrio harveyi ATCC BAA-1116]
gi|156527591|gb|ABU72676.1| hypothetical protein VIBHAR_04767 [Vibrio harveyi ATCC BAA-1116]
Length = 365
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P + + E + + + + I+++GG P+ H E + + L+E G+ +D
Sbjct: 202 LNPDGSMHQILVERLETTLAMAKANPDALIVLTGGVPKNHK-TEGKLMADWLIEKGISKD 260
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
I E + T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 261 RIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFE 307
>gi|317052073|ref|YP_004113189.1| hypothetical protein Selin_1906 [Desulfurispirillum indicum S5]
gi|316947157|gb|ADU66633.1| protein of unknown function DUF218 [Desulfurispirillum indicum S5]
Length = 249
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ IV+LG G P ++ R+ L + I++SGG
Sbjct: 73 RRAQAIVILGGGRDYGAPEFGAEDAPGNATWRRLAYGAHLARQSG-----LPILVSGGRV 127
Query: 124 QKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+E+ + + L S G+E E S T +NA++S+ +++N +I+LV+ A
Sbjct: 128 HGELHSEAWLMDQALRHSFGLEAQ--WREEHSRTTRENARYSAPILQNADITHILLVTQA 185
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAYY 238
+HL R+ F+ G+ + +D+ + + IP + + + A+ E++G A Y
Sbjct: 186 WHLPRALPEFRRQGLEVIPAPTDFASPPPGGIIAWIPRAHHLERSTQAIHEWLG--KAVY 243
Query: 239 R 239
R
Sbjct: 244 R 244
>gi|222529669|ref|YP_002573551.1| hypothetical protein Athe_1684 [Caldicellulosiruptor bescii DSM
6725]
gi|222456516|gb|ACM60778.1| protein of unknown function DUF218 [Caldicellulosiruptor bescii DSM
6725]
Length = 195
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+S + KK IIVL G + P+ P F+ R+ LYK+ II
Sbjct: 31 ISAKPKKSDCIIVL---GCAVYGDFPS----PFFRE--RLNRAFELYKNGYAR----YII 77
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+ G ++E+ L+E GV + + E +S T++N +S ++ K+ I
Sbjct: 78 VCGAKGPGENISEAEAGKRYLVEMGVLPEFVLKEDKSFSTYENLLYSKRIMNKKGFKSAI 137
Query: 178 LVSSAYHLKRSQLYFQHFGINTKAS 202
+VS+ +HL+R+ L + IN+ S
Sbjct: 138 IVSNMFHLERAHLIAKKLKINSSFS 162
>gi|196033543|ref|ZP_03100955.1| conserved hypothetical protein [Bacillus cereus W]
gi|195993977|gb|EDX57933.1| conserved hypothetical protein [Bacillus cereus W]
Length = 192
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ R+ + KS ++ I+SGG
Sbjct: 39 DADYIIVLGSKVNGT-----------KPSYSLQYRMDKAAEYLKSHEK----AIAIVSGG 83
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 84 KGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 142
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 143 DFHMFRAK 150
>gi|27468856|ref|NP_765493.1| membrane protein [Staphylococcus epidermidis ATCC 12228]
gi|27316404|gb|AAO05579.1|AE016750_184 membrane protein [Staphylococcus epidermidis ATCC 12228]
Length = 318
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 29/165 (17%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAI 85
F ++SFIG+ S+ + Q+ K +I++LG G + + T+ A
Sbjct: 121 AFSTIYSFIGY------------LSWSTAFENHQYYKHVKLIMVLGAGIFSEEVTTLLAA 168
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R++ + + +Y S + + II+SGG ++E++ L+ V
Sbjct: 169 RLD----------KALSVYHSQRTKPI---IIVSGGQGPDEPISEALAMKRYLIAHNVPE 215
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRS 188
+ I +E QS +T N +S S+I +M +++ V+S +H+ R+
Sbjct: 216 NHIFMENQSTNTRTNFLYSKSIIHSMMPTSNHMLCVTSQFHVLRA 260
>gi|94499865|ref|ZP_01306401.1| hypothetical protein RED65_15127 [Oceanobacter sp. RED65]
gi|94428066|gb|EAT13040.1| hypothetical protein RED65_15127 [Oceanobacter sp. RED65]
Length = 256
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
W + T LL++++ +Y + K+ + +++LGN P++P + S + +R+
Sbjct: 61 WHPVTTPLLRNIEQTYSGFDI----KQPVDYVIVLGNKVESDPSVP-LTSHLSSSATARL 115
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E +R+ + + T SG + + + VY + G++ I + DT
Sbjct: 116 MEGLRILNANPNGKLIVTGYASG-----NSKSSAQVYKEVAIAMGIDESRIIALEEPKDT 170
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL- 216
+ A ++ + N + NI+LV+SA H+ R+ ++FQ + + + + + ++ +
Sbjct: 171 VEEANAVANALNNHKDLNIVLVTSASHMPRAIIFFQSYFPDIQPAPTFFIAKHTESTDWR 230
Query: 217 --SANFYLTELALKEYIG 232
SA E A+ EY+G
Sbjct: 231 FDSAGLLKAERAIYEYLG 248
>gi|227902634|ref|ZP_04020439.1| integral membrane protein [Lactobacillus acidophilus ATCC 4796]
gi|227869540|gb|EEJ76961.1| integral membrane protein [Lactobacillus acidophilus ATCC 4796]
Length = 343
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 27/186 (14%)
Query: 60 PQWKKDGNIIVL---LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P+ K +IVL L NG + + A RI + Q +R ++ R I
Sbjct: 149 PRHYKQDYLIVLGAGLINGDQVSKLLAA-RINRAIQFSNRQYQKGR---------KRPII 198
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKN 175
I+SGG + E++ GV D I +E QS +T+QN FS + N G N
Sbjct: 199 IMSGGQGPDEKVPEALAMAKFAQHRGVSPDHILIEDQSKNTYQNMLFSKQLATNDFGGPN 258
Query: 176 I--ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
S+ YH+ R+ L + G+ + + +YL ++E+ G+
Sbjct: 259 FKATFFSNNYHIFRAALLAKEVGLKANGVGA-----------FTRLYYLPNAIIREFAGV 307
Query: 234 LIAYYR 239
+ + R
Sbjct: 308 FVMHKR 313
>gi|326772953|ref|ZP_08232237.1| integral membrane protein [Actinomyces viscosus C505]
gi|326637585|gb|EGE38487.1| integral membrane protein [Actinomyces viscosus C505]
Length = 337
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQG 173
+++SGG ++E+ + + GV + I LE +S T N ++ ++ + M
Sbjct: 194 LVMSGGQGADEPVSEARAMADYAIARGVPPERILLEDRSTTTRTNISYTRDLLAERGMVD 253
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL-SANFYLTELALKEYIG 232
++LV+S++H R+ + G+ +++ P +A FY+ L+EY+
Sbjct: 254 PQVLLVTSSFHAVRTAILASDMGVP------------WAVAPARTAWFYIVNAWLREYVA 301
Query: 233 IL 234
+L
Sbjct: 302 VL 303
>gi|104783752|ref|YP_610250.1| hypothetical protein PSEEN4811 [Pseudomonas entomophila L48]
gi|95112739|emb|CAK17467.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 253
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 54 QRPLLSPQWKK---DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR----IFETMRLYKS 106
+ PL WK + IV+LG G R +P++ + E MR
Sbjct: 65 EPPLELASWKDLATKADAIVVLGAGRE--------RGDPAWGGSDQPTYVALERMRFAAQ 116
Query: 107 CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS 166
+ S ++ SGG +E+ + ++L R K E S T++NA F++
Sbjct: 117 LAKAS-GLPVLTSGGLHYGTPPSEAQLMADRLEADFGVRVTWK-EEASRTTWENADFTAK 174
Query: 167 MIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFY 221
+++ + + +++V+ A+H++RS+ F+ G + +L + ++P +
Sbjct: 175 LLQPLGIRRVVVVTQAWHMQRSRWSFERAGFEVVPAPVGFLGREHARPFGGLLPEGRAMW 234
Query: 222 LTELALKEYIGIL 234
+ L E +G+L
Sbjct: 235 QSGQLLNEAVGLL 247
>gi|329726589|gb|EGG63052.1| hypothetical protein SEVCU144_2221 [Staphylococcus epidermidis
VCU144]
Length = 318
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 29/165 (17%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAI 85
F ++SFIG+ S+ + Q+ K +I++LG G + + T+ A
Sbjct: 121 AFSTIYSFIGY------------LSWSTAFENHQYYKHVKLIMVLGAGIFSEEVTTLLAA 168
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R++ + + +Y S + + II+SGG ++E++ L+ V
Sbjct: 169 RLD----------KALSVYHSQRTKPI---IIVSGGQGPDEPISEALAMKRYLIAHNVPE 215
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRS 188
+ I +E QS +T N +S S+I +M +++ V+S +H+ R+
Sbjct: 216 NHIFMENQSTNTRTNFLYSKSIIHSMMPTSSHMLCVTSQFHVLRA 260
>gi|147677433|ref|YP_001211648.1| hypothetical protein PTH_1098 [Pelotomaculum thermopropionicum SI]
gi|146273530|dbj|BAF59279.1| uncharacterized conserved protein [Pelotomaculum thermopropionicum
SI]
Length = 148
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 19/103 (18%)
Query: 116 IIISGGDPQKH---------GLAESIVYNN----------KLLESGVERDDIKLETQSLD 156
II GGD ++ GLA I+ + K +GV DI +E +S
Sbjct: 2 IIALGGDSERELYAAELYRRGLAPRIIMSGCGSAAKQMAMKAAAAGVGEQDIIVENKSGS 61
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
T+QNA ++ ++ + K+ I+V+S YH++R++L F+ NT
Sbjct: 62 TYQNALYTKDIVLSRGFKSAIVVTSPYHMRRARLVFERVFRNT 104
>gi|127512358|ref|YP_001093555.1| hypothetical protein Shew_1429 [Shewanella loihica PV-4]
gi|126637653|gb|ABO23296.1| protein of unknown function DUF218 [Shewanella loihica PV-4]
Length = 246
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Query: 102 RLYKSCKQHSM--HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL + +Q S+ C +++SG + ++ V N +E GV + I + DT +
Sbjct: 105 RLTEGVRQLSLGQDCQLVVSGWG-GSDAVPQAQVMANAAIELGVNPERIIKFPLAKDTLE 163
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL--NAYYSIIPLS 217
AQF I + + LV+SA HL R+ + F G++ + + +D++ Y+ + +
Sbjct: 164 EAQFLKWEIGDSPFR---LVTSATHLPRAMMIFHQAGMHPQGAPADFIARGGYWWQLD-A 219
Query: 218 ANFYLTELALKEYIG 232
N ++ ++ EY+G
Sbjct: 220 RNLLASQRSIHEYVG 234
>gi|90577511|ref|ZP_01233322.1| hypothetical protein VAS14_10709 [Vibrio angustum S14]
gi|90440597|gb|EAS65777.1| hypothetical protein VAS14_10709 [Vibrio angustum S14]
Length = 365
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I+++GG P H E + + L+E G+ +D I E + T NA FSS + K+
Sbjct: 231 IVLTGGVPMNHK-TEGKLMADWLIEKGISKDRIIEENYATSTVDNALFSSYALARHHIKH 289
Query: 176 IILVSSAYHLKRSQLYFQ 193
++SSA H++R Q F+
Sbjct: 290 ATIISSASHVRRGQTLFE 307
>gi|116624473|ref|YP_826629.1| hypothetical protein Acid_5395 [Candidatus Solibacter usitatus
Ellin6076]
gi|116227635|gb|ABJ86344.1| protein of unknown function DUF218 [Candidatus Solibacter usitatus
Ellin6076]
Length = 195
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R PS +R+ + LY S K T SGGDP E V + L + GV
Sbjct: 51 RGRPSPVLRARLDHALDLY-SRKFAPRILTTGGSGGDPI---FTEGGVGRSYLTQHGVPS 106
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
D I +ET+ T ++ ++ +++ M+ ++I+VS YH+ R + + G+ S
Sbjct: 107 DAIIVETEGESTVESTTMAAEIMRRMELHSVIVVSDGYHIYRVKQMLEAHGMTAYGS 163
>gi|257084233|ref|ZP_05578594.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
gi|256992263|gb|EEU79565.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
Length = 193
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
KQH +I+SGG E+ V LL GV I LE ++ T +N S +
Sbjct: 74 KQHP-ETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSEKL 132
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ K +++V+S +H+ RSQL + GI+
Sbjct: 133 ---LSFKRLVIVTSDFHMYRSQLLAKRAGIS 160
>gi|319401654|gb|EFV89863.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
Length = 318
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 29/165 (17%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAI 85
F ++SFIG+ S+ + Q+ K +I++LG G + + T+ A
Sbjct: 121 AFSTIYSFIGY------------LSWSTAFENHQYHKHVKLIMVLGAGIFSEEVTTLLAA 168
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R++ + + +Y S + + II+SGG ++E++ L+ V
Sbjct: 169 RLD----------KALSVYHSQRTKPI---IIVSGGQGPDEPISEALAMKRYLIAHNVPE 215
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRS 188
+ I +E QS +T N +S S+I +M ++ V+S +H+ R+
Sbjct: 216 NHIFMENQSTNTRTNFLYSKSIIHSMMPASSQMLCVTSQFHVLRA 260
>gi|223042665|ref|ZP_03612714.1| membrane protein [Staphylococcus capitis SK14]
gi|222444328|gb|EEE50424.1| membrane protein [Staphylococcus capitis SK14]
Length = 320
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 37/214 (17%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFS---------FIGWGIIPTILLKHLQF 51
ML++ +F+++ + HL ++F F+ L+ +I IP I L F
Sbjct: 58 MLIASLFILIKHRHLFNFKRGRLFLKHMFIYLYRIMLFLSACIYISTVDIPIINGLALWF 117
Query: 52 ---------------SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
S+ S + K+ ++I++LG G P + R
Sbjct: 118 ATIAYSTIFAFICYISWSSAYGSHLFSKNVDLIMVLGAGIFTEEVTPMLA--------ER 169
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ +++Y+S ++HS + +++SGG + E++ L+ GV I +E QS +
Sbjct: 170 LNCAIKVYES-QKHSPY--MLVSGGQGPDEPITEALAMKRYLIAKGVPEKRILMEEQSTN 226
Query: 157 TFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRS 188
T+ N Q+S +I+ G+ + V+S +H+ RS
Sbjct: 227 TYTNFQYSKPIIEKHFGRRAQFLCVTSQFHILRS 260
>gi|58338180|ref|YP_194765.1| hypothetical protein LBA1938 [Lactobacillus acidophilus NCFM]
gi|58255497|gb|AAV43734.1| hypothetical protein LBA1938 [Lactobacillus acidophilus NCFM]
Length = 367
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 27/186 (14%)
Query: 60 PQWKKDGNIIVL---LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P+ K +IVL L NG + + A RI + Q +R ++ R I
Sbjct: 173 PRHYKQDYLIVLGAGLINGDQVSKLLAA-RINRAIQFSNRQYQKGR---------KRPII 222
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKN 175
I+SGG + E++ GV D I +E QS +T+QN FS + N G N
Sbjct: 223 IMSGGQGPDEKVPEALAMAKFAQHRGVSPDHILIEDQSKNTYQNMLFSKQLATNDFGGPN 282
Query: 176 I--ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
S+ YH+ R+ L + G+ + + +YL ++E+ G+
Sbjct: 283 FKATFFSNNYHIFRAALLAKEVGLKANGVGA-----------FTRLYYLPNAIIREFAGV 331
Query: 234 LIAYYR 239
+ + R
Sbjct: 332 FVMHKR 337
>gi|262201027|ref|YP_003272235.1| hypothetical protein Gbro_1032 [Gordonia bronchialis DSM 43247]
gi|262084374|gb|ACY20342.1| protein of unknown function DUF218 [Gordonia bronchialis DSM 43247]
Length = 228
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG PAI ++ +R+ KQH + +++SGG+ +
Sbjct: 98 IVVLGAKMGTFGQTPAI-LDRRLNVAARL---------AKQHPFN-RMVVSGGNTWWLPV 146
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+E+ N LL G+ + E +S T QNA ++ M+K M ++V++ +H+ R+
Sbjct: 147 SEAQFMNLGLLRRGIPMWQMVNEGRSTSTVQNATYTVGMLKAMGANGAVIVTNGFHMGRA 206
>gi|224500115|ref|ZP_03668464.1| hypothetical protein LmonF1_10719 [Listeria monocytogenes Finland
1988]
Length = 189
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
++ + +++LG P +P++ ++ + + Y K +I+SGG
Sbjct: 36 ENADTVLILGAKVKGNPAVPSLVLQERLDA---AVAYLNEYPKAK-------VIVSGGQG 85
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E+ V L+ G+ R I+ ET+S T +N ++S++ N+ GK +I V+S Y
Sbjct: 86 ADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNAKF-NL-GKTVI-VTSDY 142
Query: 184 HLKRSQLYFQHFGINT 199
H+ R+ + + GI+
Sbjct: 143 HMYRALMLAKRQGIDA 158
>gi|298370445|ref|ZP_06981761.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281905|gb|EFI23394.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 199
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 58/96 (60%), Gaps = 9/96 (9%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGG-DPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
SR+ + L+K+ K + I+SGG + + A+S++ + + G+ R+ I+LE
Sbjct: 63 SRVEAGVELWKAGKVKKL----IMSGGMNHDGYVGAQSMMQTAEKM--GIPREVIELEDH 116
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
S T QN +++ MI+ Q K++++VSSAYH+ R++
Sbjct: 117 SETTHQNILYTAPMIE--QDKSVVIVSSAYHIPRAR 150
>gi|256958084|ref|ZP_05562255.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256948580|gb|EEU65212.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|315036298|gb|EFT48230.1| conserved hypothetical protein [Enterococcus faecalis TX0027]
Length = 193
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
KQH +I+SGG E+ V LL GV I LE ++ T +N S +
Sbjct: 74 KQHP-ETPVIVSGGQGANEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL 132
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ K +++V+S +H+ RSQL + GI+ + +
Sbjct: 133 ---LSFKRLVIVTSDFHMYRSQLLAKRAGISNASGIT 166
>gi|218553507|ref|YP_002386420.1| hypothetical protein ECIAI1_0961 [Escherichia coli IAI1]
gi|293433217|ref|ZP_06661645.1| hypothetical protein ECCG_01342 [Escherichia coli B088]
gi|300823660|ref|ZP_07103787.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|331667297|ref|ZP_08368162.1| putative KicA protein [Escherichia coli TA271]
gi|331676708|ref|ZP_08377404.1| putative KicA protein [Escherichia coli H591]
gi|218360275|emb|CAQ97825.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI1]
gi|291324036|gb|EFE63458.1| hypothetical protein ECCG_01342 [Escherichia coli B088]
gi|300523860|gb|EFK44929.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|331065653|gb|EGI37546.1| putative KicA protein [Escherichia coli TA271]
gi|331075397|gb|EGI46695.1| putative KicA protein [Escherichia coli H591]
Length = 259
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 28/225 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PHEQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++ LN + IP ++ E +G + + +G+
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|257421586|ref|ZP_05598576.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|257163410|gb|EEU93370.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|315156481|gb|EFU00498.1| conserved hypothetical protein [Enterococcus faecalis TX0043]
Length = 193
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
KQH +I+SGG E+ V LL GV I LE ++ T +N S +
Sbjct: 74 KQHP-ETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL 132
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ K +++V+S +H+ RSQL + GI+
Sbjct: 133 ---LSFKRLVIVTSDFHMYRSQLLAKRAGIS 160
>gi|315173909|gb|EFU17926.1| conserved hypothetical protein [Enterococcus faecalis TX1346]
Length = 193
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
KQH +I+SGG E+ V LL GV I LE ++ T +N S +
Sbjct: 74 KQHP-ETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL 132
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ K +++V+S +H+ RSQL + GI+
Sbjct: 133 ---LSFKRLVIVTSDFHMYRSQLLAKRAGIS 160
>gi|16804480|ref|NP_465965.1| hypothetical protein lmo2442 [Listeria monocytogenes EGD-e]
gi|47096829|ref|ZP_00234410.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|224503412|ref|ZP_03671719.1| hypothetical protein LmonFR_13022 [Listeria monocytogenes FSL
R2-561]
gi|254828017|ref|ZP_05232704.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|254831135|ref|ZP_05235790.1| hypothetical protein Lmon1_07233 [Listeria monocytogenes 10403S]
gi|254900420|ref|ZP_05260344.1| hypothetical protein LmonJ_11417 [Listeria monocytogenes J0161]
gi|254913341|ref|ZP_05263353.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937722|ref|ZP_05269419.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|255026377|ref|ZP_05298363.1| hypothetical protein LmonocytFSL_08615 [Listeria monocytogenes FSL
J2-003]
gi|255029934|ref|ZP_05301885.1| hypothetical protein LmonL_14269 [Listeria monocytogenes LO28]
gi|16411930|emb|CAD00520.1| lmo2442 [Listeria monocytogenes EGD-e]
gi|47014806|gb|EAL05758.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|258600401|gb|EEW13726.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|258610325|gb|EEW22933.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|293591346|gb|EFF99680.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 189
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
++ + +++LG P +P++ ++ + + Y K +I+SGG
Sbjct: 36 ENADTVLILGAKVKGNPAVPSLVLQERLDA---AVAYLNEYPKAK-------VIVSGGQG 85
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E+ V L+ G+ R I+ ET+S T +N ++S++ N+ GK +I V+S Y
Sbjct: 86 ADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNAKF-NL-GKTVI-VTSDY 142
Query: 184 HLKRSQLYFQHFGINT 199
H+ R+ + + GI+
Sbjct: 143 HMYRALMLAKRQGIDA 158
>gi|307289790|ref|ZP_07569727.1| hypothetical protein HMPREF9509_00109 [Enterococcus faecalis
TX0411]
gi|306499175|gb|EFM68653.1| hypothetical protein HMPREF9509_00109 [Enterococcus faecalis
TX0411]
Length = 193
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
KQH +I+SGG E+ V LL GV I LE ++ T +N S +
Sbjct: 74 KQHP-ETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL 132
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ K +++V+S +H+ RSQL + GI+
Sbjct: 133 ---LSFKRLVIVTSDFHMYRSQLLAKRAGIS 160
>gi|269792163|ref|YP_003317067.1| hypothetical protein Taci_0549 [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269099798|gb|ACZ18785.1| protein of unknown function DUF218 [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 262
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 33/185 (17%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS-RIFETMRLYKSCKQH-SMHCTIIISGGD 122
D +IVLLG G +R + + Y + ++R+ K+ + H I+ GG+
Sbjct: 80 DDGVIVLLGGG---------VRYDRDLKPYQLGNYTSVRVLKALQLHRDTGWPIVCCGGN 130
Query: 123 PQKHGLAESIVYN---NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
P+ E+ N L++ G + + E +S T++N + +++ + +N+++V
Sbjct: 131 PRLDPDPEASEANLMAQTLMDMGATQ--VYREGRSRTTWENLVNALPILRRLNRRNVVIV 188
Query: 180 SSAYHLKRS-----------QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
+S++H+ R+ +Y G T S D + S +PLS + T L L+
Sbjct: 189 TSSFHMPRAIMTARAVLKGFDVYPHQAGRLTDRSPMDPI----SFLPLSMSE--TCLGLR 242
Query: 229 EYIGI 233
E++G+
Sbjct: 243 EWVGM 247
>gi|29377330|ref|NP_816484.1| hypothetical protein EF2862 [Enterococcus faecalis V583]
gi|227554286|ref|ZP_03984333.1| conserved hypothetical protein [Enterococcus faecalis HH22]
gi|229549029|ref|ZP_04437754.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200]
gi|255974796|ref|ZP_05425382.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|256960950|ref|ZP_05565121.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256963911|ref|ZP_05568082.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|257079971|ref|ZP_05574332.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|257081584|ref|ZP_05575945.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|257087767|ref|ZP_05582128.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|257091087|ref|ZP_05585448.1| conserved hypothetical protein [Enterococcus faecalis CH188]
gi|293382461|ref|ZP_06628396.1| conserved hypothetical protein [Enterococcus faecalis R712]
gi|293387155|ref|ZP_06631716.1| conserved hypothetical protein [Enterococcus faecalis S613]
gi|294779524|ref|ZP_06744919.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
gi|307268328|ref|ZP_07549709.1| hypothetical protein HMPREF9498_00468 [Enterococcus faecalis
TX4248]
gi|307272101|ref|ZP_07553364.1| hypothetical protein HMPREF9514_00848 [Enterococcus faecalis
TX0855]
gi|307280587|ref|ZP_07561635.1| hypothetical protein HMPREF9515_01629 [Enterococcus faecalis
TX0860]
gi|307286850|ref|ZP_07566932.1| hypothetical protein HMPREF9505_00382 [Enterococcus faecalis
TX0109]
gi|312901401|ref|ZP_07760678.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|312904386|ref|ZP_07763547.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|312906516|ref|ZP_07765518.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|312910460|ref|ZP_07769306.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|29344797|gb|AAO82554.1| conserved hypothetical protein [Enterococcus faecalis V583]
gi|227176576|gb|EEI57548.1| conserved hypothetical protein [Enterococcus faecalis HH22]
gi|229305822|gb|EEN71818.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200]
gi|255967668|gb|EET98290.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|256951446|gb|EEU68078.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256954407|gb|EEU71039.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|256988001|gb|EEU75303.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|256989614|gb|EEU76916.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|256995797|gb|EEU83099.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|256999899|gb|EEU86419.1| conserved hypothetical protein [Enterococcus faecalis CH188]
gi|291080145|gb|EFE17509.1| conserved hypothetical protein [Enterococcus faecalis R712]
gi|291083426|gb|EFE20389.1| conserved hypothetical protein [Enterococcus faecalis S613]
gi|294453403|gb|EFG21810.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
gi|306502065|gb|EFM71351.1| hypothetical protein HMPREF9505_00382 [Enterococcus faecalis
TX0109]
gi|306503953|gb|EFM73170.1| hypothetical protein HMPREF9515_01629 [Enterococcus faecalis
TX0860]
gi|306511217|gb|EFM80224.1| hypothetical protein HMPREF9514_00848 [Enterococcus faecalis
TX0855]
gi|306515354|gb|EFM83888.1| hypothetical protein HMPREF9498_00468 [Enterococcus faecalis
TX4248]
gi|310627459|gb|EFQ10742.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|310632285|gb|EFQ15568.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|311289232|gb|EFQ67788.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|311291477|gb|EFQ70033.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|315026569|gb|EFT38501.1| conserved hypothetical protein [Enterococcus faecalis TX2137]
gi|315148855|gb|EFT92871.1| conserved hypothetical protein [Enterococcus faecalis TX4244]
gi|315162808|gb|EFU06825.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
gi|315166292|gb|EFU10309.1| conserved hypothetical protein [Enterococcus faecalis TX1302]
gi|315169149|gb|EFU13166.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
gi|315171876|gb|EFU15893.1| conserved hypothetical protein [Enterococcus faecalis TX1342]
gi|315575243|gb|EFU87434.1| conserved hypothetical protein [Enterococcus faecalis TX0309B]
gi|315576853|gb|EFU89044.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
gi|315582397|gb|EFU94588.1| conserved hypothetical protein [Enterococcus faecalis TX0309A]
gi|327536019|gb|AEA94853.1| hypothetical protein OG1RF_12166 [Enterococcus faecalis OG1RF]
gi|329577167|gb|EGG58637.1| hypothetical protein HMPREF9520_00991 [Enterococcus faecalis
TX1467]
Length = 193
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
KQH +I+SGG E+ V LL GV I LE ++ T +N S +
Sbjct: 74 KQHP-ETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL 132
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ K +++V+S +H+ RSQL + GI+
Sbjct: 133 ---LSFKRLVIVTSDFHMYRSQLLAKRAGIS 160
>gi|300860463|ref|ZP_07106550.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|307276161|ref|ZP_07557292.1| hypothetical protein HMPREF9521_01790 [Enterococcus faecalis
TX2134]
gi|300849502|gb|EFK77252.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|306507155|gb|EFM76294.1| hypothetical protein HMPREF9521_01790 [Enterococcus faecalis
TX2134]
Length = 193
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
KQH +I+SGG E+ V LL GV I LE ++ T +N S +
Sbjct: 74 KQHP-ETPVIVSGGQGANEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL 132
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ K +++V+S +H+ RSQL + GI+
Sbjct: 133 ---LSFKRLVIVTSDFHMYRSQLLAKRAGIS 160
>gi|160946740|ref|ZP_02093943.1| hypothetical protein PEPMIC_00699 [Parvimonas micra ATCC 33270]
gi|158447124|gb|EDP24119.1| hypothetical protein PEPMIC_00699 [Parvimonas micra ATCC 33270]
Length = 200
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++ GG + L+++ L+E G+ ++ + ET S +T++N +F+ + + + I
Sbjct: 74 VLCGGKENNNELSQAEYMQRYLIEKGISKERLIAETNSKNTYENIKFALEKL-DKKPSEI 132
Query: 177 ILVSSAYHLKRSQLYFQHFGI 197
+++SS YHL R++L FGI
Sbjct: 133 MVISSDYHLFRAKLILYRFGI 153
>gi|294498420|ref|YP_003562120.1| hypothetical protein BMQ_1655 [Bacillus megaterium QM B1551]
gi|294348357|gb|ADE68686.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 198
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ + + LYK K ++ H +I+S G + ++ ESG+ D I LE +
Sbjct: 50 DRLEKGIELYK--KGYAAH--LILSNGQENN--------FYHQAKESGIPEDSIILENHA 97
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
T +NA+F+ ++ N ++ I+VSS YH+KR++ F
Sbjct: 98 TSTTENAKFTKRLMMNYHFQSAIVVSSNYHMKRAEKNF 135
>gi|254436861|ref|ZP_05050355.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
gi|198252307|gb|EDY76621.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
Length = 221
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 31/183 (16%)
Query: 15 LLCQSIRKIF---FMSCFMLLFSFIGWGII-PTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
LL +S+ ++F ++ ++ S + W + P L+ LQ + IV
Sbjct: 2 LLVRSVGRLFKFAILAFVLMTLSILAWTFMWPQPELRALQ--------------PADAIV 47
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
LG G + S + +R+ ++L+++ + I+ SGG + +G +
Sbjct: 48 CLGGGMNANGAL-------SAPTLTRVERCVQLFEA----GLAPVIVFSGGIARPNGPSA 96
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ G+ ++ I E + T QNA FS +I N + II+V+ A+HL RS
Sbjct: 97 GRQMGRIAMTLGLPQNAIVQEGLAQSTLQNALFSLPLIPN--AERIIIVTEAFHLPRSWA 154
Query: 191 YFQ 193
F+
Sbjct: 155 SFR 157
>gi|259908912|ref|YP_002649268.1| hypothetical protein EpC_22650 [Erwinia pyrifoliae Ep1/96]
gi|224964534|emb|CAX56044.1| conserved uncharacterized protein YcbC [Erwinia pyrifoliae Ep1/96]
gi|283478907|emb|CAY74823.1| Uncharacterized protein ycbC [Erwinia pyrifoliae DSM 12163]
Length = 262
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 22/176 (12%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
IV+LG G T P + PS S R+ E +R++++ Q +I +G Q
Sbjct: 82 IVVLGGGYTWNP-----QWAPSSNMLNNSLPRLAEGIRIWRANPQ----AKLIFTGSKAQ 132
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ ++ + + + GV I + + DT Q A + ++ N + LV+SA H
Sbjct: 133 HNPMSSAALTASVAQSLGVPATAIIILDKPRDTEQEAHEVAKIVHN---QPFALVTSANH 189
Query: 185 LKRSQLYFQHFGIN------TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
L R+ +FQ+ G+ + + S LN + ++P S +E + E IG L
Sbjct: 190 LPRAIRFFQYEGLQPWPAPANQLAISSPLNFWERVLPSSFWLGHSERVVYENIGRL 245
>gi|320159372|ref|YP_004191750.1| hypothetical protein VVM_03209 [Vibrio vulnificus MO6-24/O]
gi|319934684|gb|ADV89547.1| uncharacterized conserved protein [Vibrio vulnificus MO6-24/O]
Length = 361
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P + + E + + + + II++GG PQ H E + + L+E G+ +
Sbjct: 198 LNPDGSMHDILIERLETTLAMAKANPEALIILTGGVPQNHK-TEGKLMADWLIERGISAN 256
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
I E + T NA FS+ + K+ ++SSA H++R Q F+
Sbjct: 257 RIIEENYATSTVDNALFSAYALARHGVKHATIISSASHVRRGQTLFE 303
>gi|218557825|ref|YP_002390738.1| hypothetical protein ECS88_0948 [Escherichia coli S88]
gi|218364594|emb|CAR02280.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli S88]
Length = 259
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 28/225 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V V
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLDV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++ LN + IP ++ E +G + + +G+
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|188586776|ref|YP_001918321.1| protein of unknown function DUF218 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351463|gb|ACB85733.1| protein of unknown function DUF218 [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 194
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I++GG + AES V + +++ V++DDI +ET+S T +N +++ + + ++
Sbjct: 74 LILTGGKAEDTDRAESQVAKDYAIKNQVQKDDILIETKSSITEENFKYAQEIAAEHELES 133
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I+VS H++R+ + G++ S + + Y + F + E+ YIG +I
Sbjct: 134 FIVVSDPLHMRRAITIAETKGMDVYPSPTP--GSAYETLRSQVPFLIREVIF--YIGYII 189
Query: 236 A 236
+
Sbjct: 190 S 190
>gi|27367521|ref|NP_763048.1| hypothetical protein VV2_1137 [Vibrio vulnificus CMCP6]
gi|27359093|gb|AAO08038.1|AE016812_20 Uncharacterized conserved protein [Vibrio vulnificus CMCP6]
Length = 361
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P + + E + + + + II++GG PQ H E + + L+E G+ +
Sbjct: 198 LNPDGSMHDILIERLETTLTMAKANPEALIILTGGVPQNHK-TEGKLMADWLIERGISAN 256
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
I E + T NA FS+ + K+ ++SSA H++R Q F+
Sbjct: 257 RIIEENYATSTVDNALFSAYALARHGVKHATIISSASHVRRGQTLFE 303
>gi|319638788|ref|ZP_07993547.1| periplasmic protein [Neisseria mucosa C102]
gi|317400029|gb|EFV80691.1| periplasmic protein [Neisseria mucosa C102]
Length = 218
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + II +GG P+K + E+ V L+ G+
Sbjct: 65 RPSPVFRE--RINHAITLYQSHRV----GKIIFTGGTPKKGFMTEAEVGRRYALKQGIPA 118
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+I E S +T++N + ++ +II+VS YHL R++ G++
Sbjct: 119 HNILFENTSRNTYENLRNIVPIMHANGVGSIIVVSDPYHLARAEEMAADLGLS 171
>gi|315151722|gb|EFT95738.1| conserved hypothetical protein [Enterococcus faecalis TX0012]
Length = 193
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
KQH +I+SGG E+ V LL GV I LE ++ T +N S +
Sbjct: 74 KQHP-ETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL 132
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ K +++V+S +H+ RSQL + GI+
Sbjct: 133 ---LSFKRLVIVTSDFHMYRSQLLAKRAGIS 160
>gi|261379601|ref|ZP_05984174.1| putative periplasmic protein [Neisseria subflava NJ9703]
gi|284798080|gb|EFC53427.1| putative periplasmic protein [Neisseria subflava NJ9703]
Length = 218
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + II +GG P+K + E+ V L+ G+
Sbjct: 65 RPSPVFRE--RINHAITLYQSHRV----GKIIFTGGTPKKGFMTEAEVGRRYALKQGIPA 118
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+I E S +T++N + ++ +II+VS YHL R++ G++
Sbjct: 119 HNILFENTSRNTYENLRNIVPIMHANGVGSIIVVSDPYHLARAEEMAADLGLS 171
>gi|37677322|ref|NP_937718.1| hypothetical protein VVA1662 [Vibrio vulnificus YJ016]
gi|37201868|dbj|BAC97688.1| uncharacterized conserved protein [Vibrio vulnificus YJ016]
Length = 361
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P + + E + + + + II++GG PQ H E + + L+E G+ +
Sbjct: 198 LNPDGSMHDILIERLETTLAMAKANPEALIILTGGVPQNHK-TEGKLMADWLIERGISAN 256
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
I E + T NA FS+ + K+ ++SSA H++R Q F+
Sbjct: 257 RIIEENYATSTVDNALFSAYALARHGVKHATIISSASHVRRGQTLFE 303
>gi|293367067|ref|ZP_06613739.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291318797|gb|EFE59171.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329733884|gb|EGG70208.1| putative membrane protein [Staphylococcus epidermidis VCU028]
gi|329735064|gb|EGG71360.1| putative membrane protein [Staphylococcus epidermidis VCU045]
Length = 318
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 29/165 (17%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAI 85
F ++SFIG+ S+ + Q+ K +I++LG G + + T+ A
Sbjct: 121 AFSTIYSFIGY------------LSWSTAFENHQYYKHVKLIMVLGAGIFSEEVTTLLAA 168
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R++ + + +Y S + + II+SGG ++E++ L+ V
Sbjct: 169 RLD----------KALSVYHSQRTKPI---IIVSGGQGPDEPISEALAMKRYLIAHNVPE 215
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRS 188
+ I +E QS +T N +S S+I +M ++ V+S +H+ R+
Sbjct: 216 NHIFMENQSTNTRTNFLYSKSIIHSMMPTSSQMLCVTSQFHVLRA 260
>gi|153814458|ref|ZP_01967126.1| hypothetical protein RUMTOR_00671 [Ruminococcus torques ATCC 27756]
gi|317500172|ref|ZP_07958405.1| hypothetical protein HMPREF1026_00347 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087601|ref|ZP_08336529.1| hypothetical protein HMPREF1025_00112 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145848854|gb|EDK25772.1| hypothetical protein RUMTOR_00671 [Ruminococcus torques ATCC 27756]
gi|316898461|gb|EFV20499.1| hypothetical protein HMPREF1026_00347 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330399780|gb|EGG79440.1| hypothetical protein HMPREF1025_00112 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 242
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 19/184 (10%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
W + T+ +K + +P QW I++LG +R S R
Sbjct: 65 WILFLTVEIKICLGMFSKPERGAQW------IIILG---------AQVRGRKITDSLKRR 109
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ Y + +M +++SGG ++E+ L+E GV + I+ E QS+ T
Sbjct: 110 LDAAIHYLEENERTM---VVVSGGRGPGEDISEADAMEQYLIEQGVAENRIRKEDQSVST 166
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
+N FS I + + + + +V++ +H R++L + G S S N + I L
Sbjct: 167 RENLSFSRRFI-DPKHETVGIVTNNFHSYRAKLLAEQEGYAHVFSVSASSNYVFQINYLV 225
Query: 218 ANFY 221
F+
Sbjct: 226 REFF 229
>gi|309775431|ref|ZP_07670434.1| putative periplasmic protein [Erysipelotrichaceae bacterium 3_1_53]
gi|308916820|gb|EFP62557.1| putative periplasmic protein [Erysipelotrichaceae bacterium 3_1_53]
Length = 193
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 65/116 (56%), Gaps = 9/116 (7%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
+R+ +RLY+ QH++ IIISGG ++ AE+ + + G+ ++ + LE ++
Sbjct: 57 TRMDAAIRLYR---QHTVQ-RIIISGGSV-RNDYAEAEIMAAYAITCGIAKEVLLLERKA 111
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS----QLYFQHFGINTKASCSDY 206
+T++N +++ + + ++++V+S++H++R+ + +F F + A Y
Sbjct: 112 RNTYENLKYAKEICIAHEWHSVVVVTSSFHVRRASYMVRKFFDDFAMQKTADKEPY 167
>gi|57865386|ref|YP_189508.1| hypothetical protein SERP1950 [Staphylococcus epidermidis RP62A]
gi|251811935|ref|ZP_04826408.1| membrane protein [Staphylococcus epidermidis BCM-HMP0060]
gi|282875226|ref|ZP_06284099.1| putative membrane protein [Staphylococcus epidermidis SK135]
gi|57636044|gb|AAW52832.1| membrane protein, putative [Staphylococcus epidermidis RP62A]
gi|251804534|gb|EES57191.1| membrane protein [Staphylococcus epidermidis BCM-HMP0060]
gi|281295991|gb|EFA88512.1| putative membrane protein [Staphylococcus epidermidis SK135]
Length = 318
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 29/165 (17%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAI 85
F ++SFIG+ S+ + Q+ K +I++LG G + + T+ A
Sbjct: 121 AFSTIYSFIGY------------LSWSTAFENHQYYKHVKLIMVLGAGIFSEEVTTLLAA 168
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R++ + + +Y S + + II+SGG ++E++ L+ V
Sbjct: 169 RLD----------KALSVYHSQRTKPI---IIVSGGQGPDEPISEALAMKRYLIAHNVPE 215
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRS 188
+ I +E QS +T N +S S+I +M ++ V+S +H+ R+
Sbjct: 216 NHIFMENQSTNTRTNFLYSKSIIHSMMPTSSQMLCVTSQFHVLRA 260
>gi|84388504|ref|ZP_00991051.1| hypothetical protein V12B01_06906 [Vibrio splendidus 12B01]
gi|84377053|gb|EAP93924.1| hypothetical protein V12B01_06906 [Vibrio splendidus 12B01]
Length = 284
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 25/147 (17%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE---TMRLYKSCKQHSMHCTIIISGGDPQK 125
+++LG+G + IP E S R+ E +RLY K +I+SG
Sbjct: 82 VMVLGSGHVVDDQIPPTS-ELSRTGLMRLSEGIRILRLYPGAK-------LILSG----- 128
Query: 126 HGLAESIVYNNKLLES-----GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+G A + V N +++ GV + DI L + DT++ A+ +++ +KN K ++LV+
Sbjct: 129 YG-AGTEVSNARMMAKVALALGVAKPDIILLETAKDTWEEARQAAAFVKN---KRMVLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL 207
SA H+ R+ F G+ + ++YL
Sbjct: 185 SASHMTRALNEFHAAGMKPLPAPTNYL 211
>gi|269139507|ref|YP_003296208.1| hypothetical protein ETAE_2162 [Edwardsiella tarda EIB202]
gi|267985168|gb|ACY84997.1| hypothetical protein ETAE_2162 [Edwardsiella tarda EIB202]
gi|304559396|gb|ADM42060.1| Membrane Protein [Edwardsiella tarda FL6-60]
Length = 265
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 22/176 (12%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPS----FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+V+LG G T P + PS S R+ E +R Q +I++G Q
Sbjct: 82 VVVLGGGYTYNP-----QWAPSSNLIGNSLPRVTEGIRQLALNPQ----ARLIVTGAAAQ 132
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ ++ + V GV+ I + DT Q AQ + ++ N +ILV+SA H
Sbjct: 133 GNPVSSAEVAARVARSLGVDEQRIIVLDSPRDTGQEAQAVADVVGNAP---LILVTSANH 189
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIP----LSANFYL--TELALKEYIGIL 234
+ R+ +F H G++ + ++ L + P L + YL +E A E +G L
Sbjct: 190 MPRALGFFHHQGLDPIPAPANQLAIASPLNPWERWLPSPLYLGHSERAWYETLGRL 245
>gi|149194221|ref|ZP_01871318.1| hypothetical protein CMTB2_06466 [Caminibacter mediatlanticus TB-2]
gi|149135396|gb|EDM23875.1| hypothetical protein CMTB2_06466 [Caminibacter mediatlanticus TB-2]
Length = 242
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 22/190 (11%)
Query: 57 LLSP--QWKKDGNI----IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
LL+P +K NI +V+LG G+ TI A ++ R +Y
Sbjct: 56 LLNPLENFKHKDNITPSAVVVLGGGSNPKDTIKAFP-----DAFKR-----EVYGLILAK 105
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD-DIKLETQSLDTFQNAQFSSSMIK 169
+ + + SGG K AE+ ++ +LL + + E +SL+T QN +++ + K
Sbjct: 106 TYNIPFVFSGGGIGKISEAENTKHDVQLLTKTFDVNITTYFEDKSLNTIQNGMYTALLFK 165
Query: 170 NMQGK-NIILVSSAYHLKRSQLYFQHFG--INTKASC--SDYLNAYYSIIPLSANFYLTE 224
++ NI LV++AYH+KRS F+ FG I TK S + + + P + +
Sbjct: 166 KLKLPKNIYLVTNAYHMKRSYKIFKFFGFKIITKPVGFYSKPIESIWDYFPKMNSLNASY 225
Query: 225 LALKEYIGIL 234
A+ EY G+L
Sbjct: 226 KAIHEYFGLL 235
>gi|228945317|ref|ZP_04107672.1| hypothetical protein bthur0007_14800 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228814289|gb|EEM60555.1| hypothetical protein bthur0007_14800 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 159
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ R+ + KS ++ I+SGG
Sbjct: 6 DADYIIVLGSKVNGT-----------KPSYSLQYRMDKAAEYLKSHEK----AIAIVSGG 50
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 51 KGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 109
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 110 DFHMFRAK 117
>gi|52424963|ref|YP_088100.1| hypothetical protein MS0908 [Mannheimia succiniciproducens MBEL55E]
gi|52307015|gb|AAU37515.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 250
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 32/186 (17%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI------FETMRLYKSCKQHSMHCTII 117
+ IV+LG G + S + Y++I E MR Y + I+
Sbjct: 78 RSAQAIVVLGAG-----------LRDSKELYNKITVPGIALERMR-YAAYLHKETELPIL 125
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
ISG P +G +E+ + + GV+ LE +S +T QNA ++ M++ K I
Sbjct: 126 ISGAGP--NGNSEAKIMGQEFFTFFGVQPK--WLEERSTNTKQNALYTREMLEREGIKRI 181
Query: 177 ILVSSAYHLKRSQLYFQHFG-------INTKASCSDY-LNAYYSIIPLSANFYLTELALK 228
ILV++ +H++R++L F+ G + + + Y LNA + IP + LK
Sbjct: 182 ILVTNQWHMQRAKLLFEAQGFEVLPASVGSGVTPESYELNAMH-FIPQAGAMAANMQLLK 240
Query: 229 EYIGIL 234
E++G +
Sbjct: 241 EWLGFI 246
>gi|299822206|ref|ZP_07054092.1| conserved domain protein [Listeria grayi DSM 20601]
gi|299815735|gb|EFI82973.1| conserved domain protein [Listeria grayi DSM 20601]
Length = 348
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ + +++LG+G I R+ P + RI + + YK+ I+ SGG
Sbjct: 167 RQPDFLIVLGSGL-----IGGNRVPPLLAA--RIDKAIAFYKASV--GARPQIVFSGGKG 217
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSA 182
++E+ + G+ D +E S T++N +FS+ ++ N + I ++
Sbjct: 218 ADETISEAEAMQQYAIAKGIPEQDTLVEKNSRTTYENMRFSAEIMANRKTNYEAIFFTNN 277
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
YH+ R+ ++ + G+ + +A ++L L+E+I IL
Sbjct: 278 YHVLRAGMFARKAGLAINGIGAK-----------TAFYFLPNAFLREWIAIL 318
>gi|332288218|ref|YP_004419070.1| hypothetical protein UMN179_00136 [Gallibacterium anatis UMN179]
gi|330431114|gb|AEC16173.1| hypothetical protein UMN179_00136 [Gallibacterium anatis UMN179]
Length = 251
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 44/191 (23%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI----FETMRLYKSCKQHSMHCTIIIS 119
+ G +IV+LG G +R +SYS E MR Q + I IS
Sbjct: 77 RQGQVIVVLGGG---------LRYSDYPESYSTTAALPLERMRFAVYLHQMT-DLPIAIS 126
Query: 120 GGDPQKHGLAESIVYNNKLLESGVER----DDIKLETQSLDTFQNAQFSSSMI-KNMQGK 174
GG + K++ S ++R + L+ +S T QNA + + + +GK
Sbjct: 127 GG----------VDNEAKVMGSELQRFFQIEPTWLDNKSNTTEQNAIYLRKLFNQTEEGK 176
Query: 175 NI---ILVSSAYHLKRSQLYFQHFG--------INTKASCSDYLNAYYSIIPLSANFYLT 223
I ILV++ +H++R+ FQ G ++ +AS S L IP +FY +
Sbjct: 177 QIQRVILVTNEWHMRRAVAAFQRQGFEVFPAPTLSQRASGSGLLK----FIPQPVSFYQS 232
Query: 224 ELALKEYIGIL 234
L L+E++GIL
Sbjct: 233 GLVLREWLGIL 243
>gi|301156135|emb|CBW15606.1| conserved inner membrane protein [Haemophilus parainfluenzae T3T1]
Length = 247
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ IVLLG G + A + Q E +R Y + Q H ++I+G P
Sbjct: 76 QQAQAIVLLGGGLRDSKELYAPLASTAIQ-----LERLR-YAAFLQKETHLPLLITGASP 129
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
G E+ + +L ++ +E ++L T +NA F+ M++ IILV++ +
Sbjct: 130 T--GAIEAKIAAEEL-QNFFNVPTKWIEPKALTTKENALFTKQMLEKEGIHKIILVTNEW 186
Query: 184 HLKRSQLYFQHFGIN 198
H++R++L FQ G +
Sbjct: 187 HMQRAKLLFQQQGFD 201
>gi|74311477|ref|YP_309896.1| hypothetical protein SSON_0922 [Shigella sonnei Ss046]
gi|73854954|gb|AAZ87661.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|323165391|gb|EFZ51178.1| hypothetical protein SS53G_4075 [Shigella sonnei 53G]
Length = 259
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 28/224 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 41 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 95
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 96 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
R+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ +N +
Sbjct: 152 PREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEELNPLPA 207
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++ LN + IP ++ E +G + + +G
Sbjct: 208 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|218676855|ref|YP_002395674.1| hypothetical protein VS_II1096 [Vibrio splendidus LGP32]
gi|218325123|emb|CAV26988.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 365
Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P + + E + + + + I+++GG P+ H E + + L+ GV +D
Sbjct: 202 LNPDGSMHEILIERLETTLAMSKANPDAMIVLTGGVPKNHK-TEGKLMADWLISKGVSKD 260
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
I E + T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 261 RIIEENYATSTVGNALFSSYALARHDIKHATIISSASHVRRGQTLFE 307
>gi|269104339|ref|ZP_06157035.1| hypothetical protein VDA_000496 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268160979|gb|EEZ39476.1| hypothetical protein VDA_000496 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 326
Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I ++GG Q G++E+ L E G++ DI LE QS +T +NAQ++ ++ ++
Sbjct: 192 IFLTGGRAQN-GMSEAQAMKQWLQERGIDHSDIVLEEQSRNTIENAQYTVPLLHLYAIES 250
Query: 176 IILVSSAYHLKRSQLYF 192
++S++ H+ R+ L F
Sbjct: 251 ATIISNSIHVHRALLAF 267
>gi|109897531|ref|YP_660786.1| hypothetical protein Patl_1206 [Pseudoalteromonas atlantica T6c]
gi|109699812|gb|ABG39732.1| protein of unknown function DUF218 [Pseudoalteromonas atlantica
T6c]
Length = 251
Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 28/231 (12%)
Query: 21 RKIF-FMSCFMLLFSFIGWGIIPTILL-KHLQFSYQR-PLLSPQWKKDGNIIVLLGN--- 74
R+I+ + SC +L+ + P++LL K L+ Y L S +W+ I+VL N
Sbjct: 34 RRIYQWASCVPILWVLFCSLVYPSVLLIKPLEDQYPTIKLSSNEWQLTDGIVVLACNHFD 93
Query: 75 --GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G + P ++ L+ + + I ++ G + L
Sbjct: 94 DDGLPFVSKWPQCTMQ------------RNLHAALMYNEKPLPIYLAAGILNETDLKSQA 141
Query: 133 VYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
YN L + GV DI DT + ++ +Q K++ LVSSA HL R+ Y
Sbjct: 142 QYNKDFLVTLGVNPKDIHTFPMGHDTESEVE---ALAPYLQNKHMALVSSASHLPRAVEY 198
Query: 192 FQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAYY 238
F+ G++ ++L+ ++ +P + + Y +E A+ EY+G++ Y
Sbjct: 199 FRLHGLSVLPIPVEHLSRKHVSFTIGLPNAYSLYRSERAIHEYLGLIYQRY 249
>gi|269963292|ref|ZP_06177623.1| hypothetical protein VME_40070 [Vibrio harveyi 1DA3]
gi|269831931|gb|EEZ86059.1| hypothetical protein VME_40070 [Vibrio harveyi 1DA3]
Length = 207
Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+RLYK K +++SGG+ E L++GV DI LE + +T +
Sbjct: 66 AVRLYKEKKV----SKLLLSGGNLAIDQKPEFESMKEYALDNGVPDSDIILERHAKNTVE 121
Query: 160 NAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQH 194
NAQ+SS +I + +++ ++++A+H+KR++ F++
Sbjct: 122 NAQYSSEIILESEIAKRSVAILTTAFHIKRAKYLFKN 158
>gi|194448844|ref|YP_002044067.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205359241|ref|ZP_02668425.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194407148|gb|ACF67367.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205337510|gb|EDZ24274.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 249
Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P FQ+ R+ + LY+ QH + ++++GG ++++ + +LE G+ I
Sbjct: 100 PVFQA--RLDHAIWLYQ---QHIVRA-LVLTGGYGAGATVSDAAIARQYVLEKGIPAKAI 153
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+E +S T +N +++ +++ Q + +LVS H+ R + Q GI++++S +
Sbjct: 154 FIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSRSSPT 209
>gi|313669320|ref|YP_004049604.1| periplasmic protein [Neisseria lactamica ST-640]
gi|313006782|emb|CBN88252.1| putative periplasmic protein [Neisseria lactamica 020-06]
Length = 218
Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P FQ RI + LY+S + II +GG +K + E+ V L+ G+
Sbjct: 66 RPSPVFQE--RINHAIALYQSRRVGK----IIFTGGRSKKGYMTEAEVGRRYALKQGIPP 119
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+I E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 120 RNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEIAEDLGVRVYMSAT 178
>gi|258622260|ref|ZP_05717286.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258624327|ref|ZP_05719276.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|262173068|ref|ZP_06040745.1| TPR repeat-containing protein [Vibrio mimicus MB-451]
gi|258583478|gb|EEW08278.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258585584|gb|EEW10307.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|261890426|gb|EEY36413.1| TPR repeat-containing protein [Vibrio mimicus MB-451]
Length = 363
Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ T+ + K+ + II++GG PQ H E + + L+E GV I E +
Sbjct: 213 RLETTLAMAKANPE----AMIILTGGVPQNHK-TEGKLMADWLIERGVSATRIIEENYAT 267
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 268 STVDNALFSSYALARHGIKHATIISSASHVRRGQTLFE 305
>gi|169830663|ref|YP_001716645.1| hypothetical protein Daud_0467 [Candidatus Desulforudis audaxviator
MP104C]
gi|169637507|gb|ACA59013.1| protein of unknown function DUF218 [Candidatus Desulforudis
audaxviator MP104C]
Length = 264
Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ RLY Q + +++SGG P L E+ + L GV I +E ++
Sbjct: 78 ERLEYAFRLY----QEGLADRLLLSGG-PLYADLTEADLLRRHALMLGVPEYKIIMEPRA 132
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+T+QNA +S M++ + I++SS YH++R + F
Sbjct: 133 TNTYQNALYSREMMEYYGLDSAIVISSPYHMRRVRALFDE 172
>gi|268590146|ref|ZP_06124367.1| putative membrane protein [Providencia rettgeri DSM 1131]
gi|291314421|gb|EFE54874.1| putative membrane protein [Providencia rettgeri DSM 1131]
Length = 275
Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 27/230 (11%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLK--HLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
F + ++L + +G + LL QF+ + L++ +D IV+LG G T P
Sbjct: 42 FTTLSLVLITLLGLQPVSDTLLAPAEKQFNKRYELITENPPQDVRYIVVLGGGFTYNPDW 101
Query: 83 PAIRIEPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
PS S R+ E +RLY +H +I +GG ++ + V
Sbjct: 102 -----SPSSNLLNNSLPRVTEGVRLYL---KHP-GSKLIFTGGK-ASSPISSAEVAAQVA 151
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVSSAYHLKRSQLYFQHFGI 197
GV D T+ DT Q + ++ + GK+ +LV+SA HL R+ F G+
Sbjct: 152 QSLGVPAQDTIPLTEPKDT----QEEAYEVEKIIGKSPFLLVTSANHLPRAMTMFTQRGM 207
Query: 198 NTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
N + ++ L N + IP S F +E A E++G L + + N
Sbjct: 208 NPFPAPANQLVITSEINPWEKYIPSSYYFGHSERAWYEFLGTLWWHLKPN 257
>gi|291545077|emb|CBL18186.1| Uncharacterized conserved protein [Ruminococcus sp. 18P13]
Length = 259
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNM 171
C +++SGG ++E+ L E GV D I E +S T +N +FS ++ +
Sbjct: 140 CLLVVSGGKGSNEDISEAACMYQYLTEKGVPADRILQEDRSTSTRENLRFSKELLAERGC 199
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFG 196
K I LV++ +H R+ + + G
Sbjct: 200 MPKEIALVTNEFHQLRASMIAKDCG 224
>gi|148558293|ref|YP_001257412.1| Bme2 protein [Brucella ovis ATCC 25840]
gi|148369578|gb|ABQ62450.1| Bme2 protein [Brucella ovis ATCC 25840]
Length = 205
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 65/136 (47%), Gaps = 18/136 (13%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
I P R + +L+K + I++ GD + ++ + ++ GV
Sbjct: 37 IVPGGDGAPRAAQAAQLWKDGRS-----PYILATGD------GDCLLNKHIMMAKGVPPS 85
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ------HFGINTK 200
I +E +S T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+ HF ++
Sbjct: 86 AILVECRSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTACPQMHF-TSSP 144
Query: 201 ASCSDYLNAYYSIIPL 216
+ +D + I P+
Sbjct: 145 VADADMPGGFPGIPPV 160
>gi|294085382|ref|YP_003552142.1| hypothetical protein SAR116_1815 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664957|gb|ADE40058.1| DUF218 [Candidatus Puniceispirillum marinum IMCC1322]
Length = 264
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 20/216 (9%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
LL+ FI IP L+ L+ + P+L + DG I++LG G T I R +P
Sbjct: 50 LLYGFIPLSHIP---LQFLENRFDVPILEGR-PLDG--IIILG-GHTGNGEISEGRGQPQ 102
Query: 91 FQSYSRIFET-MRLYKSCKQHSMHCTIIISG--GDPQKHGLAESIVYNNKLLESGV-ERD 146
+ + F T + L++ I+ SG G+ G +E+ L E G+ E
Sbjct: 103 LSAAAERFTTALHLHRQFPD----LPILFSGFSGELMPKGWSETQTIKRLLDELGMAESP 158
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG----INTKAS 202
+I E+ S +T++NA +S +++ G +LV+SA H+ R+ F++ G I
Sbjct: 159 NILFESTSRNTYENALYSETVLSPQPGSFWVLVTSASHMPRAVGSFRNAGWGGVIPYPVD 218
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + I L + + EY G L AY+
Sbjct: 219 YQTLPSGFPYIWNLPRGLHTMTIVFHEYAG-LFAYW 253
>gi|196045100|ref|ZP_03112333.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|225863573|ref|YP_002748951.1| hypothetical protein BCA_1675 [Bacillus cereus 03BB102]
gi|196024102|gb|EDX62776.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|225789948|gb|ACO30165.1| conserved hypothetical protein [Bacillus cereus 03BB102]
Length = 178
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 25 EADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----AIAIVSGG 69
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 70 KGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 128
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 129 DFHMFRAK 136
>gi|118477152|ref|YP_894303.1| hypothetical protein BALH_1456 [Bacillus thuringiensis str. Al
Hakam]
gi|118416377|gb|ABK84796.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 192
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 39 EADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----AIAIVSGG 83
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 84 KGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 142
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 143 DFHMFRAK 150
>gi|291459679|ref|ZP_06599069.1| putative membrane protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291417711|gb|EFE91430.1| putative membrane protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 260
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 105/254 (41%), Gaps = 55/254 (21%)
Query: 3 LSWIFLIVSYW---HLLCQSIRKIFFM---SCFM-----LLFSFIGWGIIPTILLKHLQF 51
L W FL VS+ L+ I + F + +C + LLF + W +I T
Sbjct: 46 LFWFFLSVSFLFLEELIRHGIWRRFPLLRGTCLLGIFTGLLFLLVSWCLIGT-------- 97
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA----IRIEPSFQSYSRIFETMRLYKSC 107
S +K ++VL G + P+ PA +R++ +F S ET+
Sbjct: 98 ----EFFSRGEEKLDYLVVL---GAQVRPSGPAAVLRLRLDRAFAYLSENPETL------ 144
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
I+SGG Q +E+ + LL G+ + I LE QS +T +N S+ +
Sbjct: 145 --------CIVSGGKGQNEPCSEAEAMRDYLLRRGISAERILLEDQSKNTRENIANSARL 196
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ N + + ++SS +H+ R + I KA + +++ S YL L
Sbjct: 197 L-NPERDRVGILSSDFHVYRGK------AIAKKAGYRE----VFAVSARSNRLYLLNNML 245
Query: 228 KEYIGILIAYYRGN 241
+E + ++ GN
Sbjct: 246 RESLALVKDKIAGN 259
>gi|148977536|ref|ZP_01814115.1| hypothetical protein VSWAT3_23004 [Vibrionales bacterium SWAT-3]
gi|145963187|gb|EDK28454.1| hypothetical protein VSWAT3_23004 [Vibrionales bacterium SWAT-3]
Length = 284
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 25/147 (17%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE---TMRLYKSCKQHSMHCTIIISGGDPQK 125
+++LG+G + IP E S R+ E +RLY K +I+SG
Sbjct: 82 VMVLGSGHVVDDQIPPTS-ELSRTGLMRLSEGIRILRLYPGAK-------LILSG----- 128
Query: 126 HGLAESIVYNNKLLES-----GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+G A + V N +++ GV + DI L + DT++ A+ +++ +KN K ++LV+
Sbjct: 129 YG-AGTEVSNARMMAKVALALGVAKPDIILLETAKDTWEEARQAAAFVKN---KRMVLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL 207
SA H+ R+ F G+ + ++YL
Sbjct: 185 SASHMTRALNEFNAAGMKPLPAPTNYL 211
>gi|238911156|ref|ZP_04654993.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
Length = 206
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P FQ+ R+ + LY+ QH + ++++GG ++++ + +LE G+ I
Sbjct: 57 PVFQA--RLDHAIWLYQ---QHIVRA-LVLTGGYGAGATVSDAAIARQYVLEKGIPAKAI 110
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+E +S T +N +++ +++ Q + +LVS H+ R + Q GI++++S
Sbjct: 111 FIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSRSS 164
>gi|59713611|ref|YP_206386.1| inner membrane protein [Vibrio fischeri ES114]
gi|197337496|ref|YP_002158026.1| integral membrane protein [Vibrio fischeri MJ11]
gi|59481859|gb|AAW87498.1| conserved inner membrane protein [Vibrio fischeri ES114]
gi|197314748|gb|ACH64197.1| integral membrane protein [Vibrio fischeri MJ11]
Length = 287
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQ 61
FL++ + LL K + F+L S +G + I T LLK + Y ++P+
Sbjct: 18 FLLIGFIGLLILWFSKRKGFASFLLTLSLLGIFLLSFQPITTPLLKSTERIYPS-FIAPE 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG- 120
+ +++LGNG + I I E S + R+ E +R+Y+ M I+SG
Sbjct: 77 TPVE--YVLVLGNGHVVDDEISPIS-ELSRAAVMRLTEGIRIYRMYPGSKM----ILSGY 129
Query: 121 --GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA-QFSSSMIKNMQGKNII 177
G H + V L GV++ DI L + DT + A Q +S+ K+ ++
Sbjct: 130 NGGTTVSHARMMARVA----LSLGVQKSDILLLESARDTHEEAIQTFNSVGKS----TLV 181
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
LV+SA H+ R+ F G++ + ++YL
Sbjct: 182 LVTSASHMPRAMSEFHQLGMDPVPAPTNYL 211
>gi|284802880|ref|YP_003414745.1| hypothetical protein LM5578_2637 [Listeria monocytogenes 08-5578]
gi|284996021|ref|YP_003417789.1| hypothetical protein LM5923_2586 [Listeria monocytogenes 08-5923]
gi|284058442|gb|ADB69383.1| hypothetical protein LM5578_2637 [Listeria monocytogenes 08-5578]
gi|284061488|gb|ADB72427.1| hypothetical protein LM5923_2586 [Listeria monocytogenes 08-5923]
Length = 189
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
++ + +++LG P +P++ ++ + + Y K +I+SGG
Sbjct: 36 ENADTVLILGAKVKGNPAVPSLVLQERLDA---AVAYLNEYPKAK-------VIVSGGQG 85
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E+ V L+ G+ R I+ ET+S T +N ++S++ N+ GK +I V+S Y
Sbjct: 86 ADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNAKF-NL-GKTVI-VTSDY 142
Query: 184 HLKRSQLYFQHFGINT 199
H+ R + + GI+
Sbjct: 143 HMYRGLMLAKRQGIDA 158
>gi|262403290|ref|ZP_06079850.1| TPR repeat-containing protein [Vibrio sp. RC586]
gi|262350789|gb|EEY99922.1| TPR repeat-containing protein [Vibrio sp. RC586]
Length = 363
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
II++GG PQ H E + + L+E GV I E + T NA FSS +
Sbjct: 227 AVIILTGGVPQNHK-TEGKLMADWLIERGVSTTRIIEENYATSTVDNALFSSYALARHGI 285
Query: 174 KNIILVSSAYHLKRSQLYFQ 193
K+ ++SSA H++R Q F+
Sbjct: 286 KHATIISSASHVRRGQTLFE 305
>gi|205360555|ref|ZP_02684196.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205348825|gb|EDZ35456.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
Length = 237
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P FQ+ R+ + LY+ QH + ++++GG ++++ + +LE G+ I
Sbjct: 88 PVFQA--RLDHAIWLYQ---QHIVRA-LVLTGGYGAGATVSDAAIARQYVLEKGIPAKAI 141
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+E +S T +N +++ +++ Q + +LVS H+ R + Q GI++++S +
Sbjct: 142 FIEERSTVTRENIRYAKQILREQQWRTALLVSDPLHMLRLKTIAQDNGIDSRSSPT 197
>gi|325677631|ref|ZP_08157283.1| hypothetical protein CUS_6193 [Ruminococcus albus 8]
gi|324110599|gb|EGC04763.1| hypothetical protein CUS_6193 [Ruminococcus albus 8]
Length = 252
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKN 175
++SGG ++E+ ++ L+ G + I +E +S TF+N +F+ M + G++
Sbjct: 137 VVSGGQGYGEKISEAKAMHDYLISKGADESRILMEDKSTSTFENIKFTFEMTDKLGYGRD 196
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
I +V+ +H R+ L + G + S + Y
Sbjct: 197 ITIVTDGFHQYRASLIAKQEGAGRITAYSAHTEPRY 232
>gi|227519414|ref|ZP_03949463.1| conserved hypothetical protein [Enterococcus faecalis TX0104]
gi|227073121|gb|EEI11084.1| conserved hypothetical protein [Enterococcus faecalis TX0104]
Length = 193
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
KQH +I+SGG E+ V LL GV I LE ++ T +N S +
Sbjct: 74 KQHP-ETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL 132
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ K +++V+S +H+ RSQL GI+
Sbjct: 133 ---LSFKRLVIVTSDFHMYRSQLLANRAGIS 160
>gi|229916781|ref|YP_002885427.1| hypothetical protein EAT1b_1054 [Exiguobacterium sp. AT1b]
gi|229468210|gb|ACQ69982.1| protein of unknown function DUF218 [Exiguobacterium sp. AT1b]
Length = 166
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 18/135 (13%)
Query: 107 CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS 166
K H H +I +GG G+AE+ V +L+ G++ I +E S T +N + S
Sbjct: 39 AKAHP-HVELIATGGQGPDEGMAEARVIERELMAQGIDATRIHVEATSTSTIENFEHSRL 97
Query: 167 MIKNMQGKNIILVSSAYHLKR----SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYL 222
G + +V++ +H+ R ++LYFQ SD L Y PL+ YL
Sbjct: 98 FWDGASG--VTIVTNDFHVPRARLIARLYFQ--------LKSDAL--YAPTPPLAKGRYL 145
Query: 223 TELALKEYIGILIAY 237
L Y+ +L Y
Sbjct: 146 IREVLA-YVKLLGRY 159
>gi|325578228|ref|ZP_08148363.1| hypothetical protein HMPREF9417_1104 [Haemophilus parainfluenzae
ATCC 33392]
gi|325159964|gb|EGC72093.1| hypothetical protein HMPREF9417_1104 [Haemophilus parainfluenzae
ATCC 33392]
Length = 247
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 16/176 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ IVLLG G + A Q E +R Y + Q H ++I+G P
Sbjct: 76 QQAQAIVLLGGGLRDSKELYAPLASTGIQ-----LERLR-YAAFLQKETHLPLLITGASP 129
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
G E+ + +L ++ +E ++L T +NA F+ M++ IILV++ +
Sbjct: 130 T--GAIEAKIAAEEL-QNFFNVPTKWIEPKALTTKENALFTKQMLEKEGIHKIILVTNEW 186
Query: 184 HLKRSQLYFQHFGINT-KASCSDYLNA------YYSIIPLSANFYLTELALKEYIG 232
H++R++L FQ G + AS + + IP LKE+IG
Sbjct: 187 HMQRAKLLFQQQGFDVLPASVGEGITPDSYGLNMMHFIPQGGAITKNMQLLKEWIG 242
>gi|62178663|ref|YP_215080.1| hypothetical protein SC0093 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62126296|gb|AAX63999.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322713116|gb|EFZ04687.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 206
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P FQ+ R+ + LY+ QH + ++++GG ++++ + +LE G+ I
Sbjct: 57 PVFQA--RLDHAIWLYQ---QHIVRA-LVLTGGYGAGATVSDAAIARQYVLEKGIPAKAI 110
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+E +S T +N +++ +++ Q + +LVS H+ R + Q GI++++S
Sbjct: 111 FIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSRSS 164
>gi|315634101|ref|ZP_07889390.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
gi|315477351|gb|EFU68094.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
Length = 247
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 16/178 (8%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IVLLG G + + S + E +R Y + Q ++ISG P
Sbjct: 76 KQAQAIVLLGGGVR-----DSKELYAPLASSATQLERLR-YAAYLQKETQLPLLISGVSP 129
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
G +E V +L ++ LE +SL T +NA ++ +++ IILV++ +
Sbjct: 130 T--GASEGKVSAEEL-QTFFNVPTKWLEEKSLTTKENALYTRQLLEKEGIHKIILVTNEW 186
Query: 184 HLKRSQLYFQHFGINT-KASCSDYLNA------YYSIIPLSANFYLTELALKEYIGIL 234
H++R++L FQ G + AS + + +P + LKE+IG L
Sbjct: 187 HMQRAKLLFQQQGFDVLPASVGEGITPDSYGLNMMHFVPQAGAMAKNMQLLKEWIGYL 244
>gi|262164725|ref|ZP_06032463.1| hypothetical protein VMA_001169 [Vibrio mimicus VM223]
gi|262027105|gb|EEY45772.1| hypothetical protein VMA_001169 [Vibrio mimicus VM223]
Length = 363
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ T+ + K+ II++GG PQ H E + + L+E GV I E +
Sbjct: 213 RLETTLEMAKANPD----AMIILTGGVPQNHK-TEGKLMADWLIERGVSATRIIEENYAT 267
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 268 STVDNALFSSYALARHGIKHATIISSASHVRRGQTLFE 305
>gi|116496133|ref|YP_807867.1| hypothetical protein LSEI_2710 [Lactobacillus casei ATCC 334]
gi|116106283|gb|ABJ71425.1| hypothetical protein LSEI_2710 [Lactobacillus casei ATCC 334]
Length = 360
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
P +++P+ + I K+ K++ I+++GG P+ + L E+ V L+ G
Sbjct: 196 PNGKMQPTMKKRLEI-----ALKAAKKYP-KSKILVAGGVPE-NKLTEATVMQKWLVAHG 248
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ + I+LE S +T +NA FS + + + L++SA H++R+ L ++ G
Sbjct: 249 IAKKRIELEDLSTNTVENALFSVRELVDRGATSATLITSATHMRRAFLLYRMAG 302
>gi|255971798|ref|ZP_05422384.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|312951115|ref|ZP_07770020.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|255962816|gb|EET95292.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|310630891|gb|EFQ14174.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|315154145|gb|EFT98161.1| conserved hypothetical protein [Enterococcus faecalis TX0031]
gi|315158992|gb|EFU03009.1| conserved hypothetical protein [Enterococcus faecalis TX0312]
gi|323481728|gb|ADX81167.1| conserved hypothetical protein [Enterococcus faecalis 62]
Length = 193
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
KQH +I+SGG E+ V LL GV I LE ++ T +N S +
Sbjct: 74 KQHP-ETPVIVSGGQGANEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL 132
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ K +++V+S +H+ RSQL + GI+
Sbjct: 133 ---LYFKRLVIVTSDFHMYRSQLLAKRAGIS 160
>gi|227893874|ref|ZP_04011679.1| integral membrane protein [Lactobacillus ultunensis DSM 16047]
gi|227864363|gb|EEJ71784.1| integral membrane protein [Lactobacillus ultunensis DSM 16047]
Length = 367
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 17/141 (12%)
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
R Y+ ++ + +I+SGG ++E + GV D I +E QS +T+QN
Sbjct: 211 RQYQKGRKRPI---LIMSGGQGPDEKISEGLAMARFAHHRGVSPDQILIEDQSKNTYQNM 267
Query: 162 QFSSSMIKNMQGKN---IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
FS + G N S+ YH+ R+ L + G+ KA+ +Y
Sbjct: 268 LFSKRLAIKDFGSNKFRATFFSNNYHIFRAGLLAKEVGL--KANGVGAFTRFY------- 318
Query: 219 NFYLTELALKEYIGILIAYYR 239
YL ++E+ G+ + + R
Sbjct: 319 --YLPNAVIREFAGVFVMHKR 337
>gi|200389290|ref|ZP_03215902.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199606388|gb|EDZ04933.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 237
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P FQ+ R+ + LY+ QH + ++++GG ++++ + +LE G+ I
Sbjct: 88 PVFQA--RLDHAIWLYQ---QHIVRA-LVLTGGYGAGATVSDAAIARQYVLEKGIPAKAI 141
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+E +S T +N +++ +++ Q + +LVS H+ R + Q GI++++S +
Sbjct: 142 FIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSRSSPT 197
>gi|295693788|ref|YP_003602398.1| hypothetical protein LCRIS_01926 [Lactobacillus crispatus ST1]
gi|295031894|emb|CBL51373.1| Membrane protein [Lactobacillus crispatus ST1]
Length = 343
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 24/141 (17%)
Query: 69 IVLLGNG---TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
IV+LG G T + P + A RI + Y + + +I+SGG
Sbjct: 177 IVVLGAGIMGTKVTPLLAA-RISRGIEIYHK--------------NPGSKLIMSGGQGHG 221
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ E++ + G+ ++DI +E +S T QN QFS +++K +V+S+YH+
Sbjct: 222 DDIPEAVAMAEYAEKLGINKNDIIIENKSKTTQQNLQFSHALMK--PNSRFCIVTSSYHV 279
Query: 186 KRSQLYFQHFGINTKASCSDY 206
R+ + + G+ C+ Y
Sbjct: 280 YRALVLAKRQGLK----CTGY 296
>gi|267991770|gb|ACY86655.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
Length = 250
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P FQ+ R+ + LY+ QH + ++++GG ++++ + +LE G+ I
Sbjct: 101 PVFQA--RLDHAIWLYQ---QHIVRA-LVLTGGYGAGATVSDAAIARQYVLEKGIPAKAI 154
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+E +S T +N +++ +++ Q + +LVS H+ R + Q GI++++S +
Sbjct: 155 FIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSRSSPT 210
>gi|229144329|ref|ZP_04272735.1| hypothetical protein bcere0012_14900 [Bacillus cereus BDRD-ST24]
gi|228639116|gb|EEK95540.1| hypothetical protein bcere0012_14900 [Bacillus cereus BDRD-ST24]
Length = 194
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 41 EADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----AIAIVSGG 85
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 86 KGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 144
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 145 DFHMFRAK 152
>gi|332798404|ref|YP_004459903.1| hypothetical protein TepRe1_0394 [Tepidanaerobacter sp. Re1]
gi|332696139|gb|AEE90596.1| protein of unknown function DUF218 [Tepidanaerobacter sp. Re1]
Length = 193
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 87/188 (46%), Gaps = 27/188 (14%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
++++ F+ F+LLFSF+ II ++++ + + P+ + +++LG G
Sbjct: 2 LKRLLFIIVFVLLFSFL---IIESLIIVNSFSNDDMPV---------DYMIILGAGLYGD 49
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P++R R+ + + Q I++SGG ++E+ L+
Sbjct: 50 EPSPSLRY--------RLQQALEYANKYPQ----VPIVVSGGQGSNEWISEAEAMQRFLV 97
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIK---NMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ G++ + I E S +T +N F+ +IK + +++V+S YH+ RS+ + +G
Sbjct: 98 KHGIKEERIIKEDCSTNTGENLLFAREVIKYTGKAERPKVMIVTSEYHMFRSKFLARRYG 157
Query: 197 INTKASCS 204
C+
Sbjct: 158 FIPYGICA 165
>gi|325133332|gb|EGC55998.1| hypothetical protein NMBM13399_2155 [Neisseria meningitidis M13399]
Length = 218
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 32/186 (17%)
Query: 24 FFMSCFMLLFSFIG--WGIIPT---ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
F +S F LL F W + T +L H++ L + W K
Sbjct: 20 FCLSVFPLLLVFTSSVWAVYRTGGQVLPPHVRADAALVLGAAAWDK-------------- 65
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
R P F+ RI + LY+S + II +GG +K + E+ V
Sbjct: 66 -------RPSPVFRE--RINHAIALYQSRRVGK----IIFTGGRSKKGYMTEAEVGRRYA 112
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
L+ GV +I E S +T++N +++ ++++VS YHL R+ + G+
Sbjct: 113 LKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVR 172
Query: 199 TKASCS 204
S +
Sbjct: 173 VYMSAT 178
>gi|315646581|ref|ZP_07899699.1| hypothetical protein PVOR_14364 [Paenibacillus vortex V453]
gi|315278224|gb|EFU41544.1| hypothetical protein PVOR_14364 [Paenibacillus vortex V453]
Length = 217
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 115 TIIISGG-DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
T I+SGG D + E+ N L+E+GV + I LE ++ T++N +S +++N
Sbjct: 93 TFIVSGGLDKPGYTYTEAEGMRNFLVEAGVPEERIYLENEATSTYENLLYSQDIMENNGW 152
Query: 174 KNIILVSSAYHLKRS 188
K I+++ YH RS
Sbjct: 153 KTAIIITHDYHGTRS 167
>gi|242243837|ref|ZP_04798281.1| membrane protein [Staphylococcus epidermidis W23144]
gi|242232681|gb|EES34993.1| membrane protein [Staphylococcus epidermidis W23144]
Length = 318
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 29/165 (17%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG--TTIIPTIPAI 85
F ++SFIG+ S+ + Q+ K +I++LG G + + T+ A
Sbjct: 121 AFSTIYSFIGY------------LSWSTAFENHQYHKHVKLIMVLGAGIFSEEVTTLLAA 168
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R++ + + +Y S + + II+SGG ++E++ L+ V
Sbjct: 169 RLD----------KALSVYHSQRTKPI---IIVSGGQGPDEPISEALAMKRYLIAHNVPE 215
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRS 188
+ I +E QS +T N +S S+I +M ++ V+S +H+ R+
Sbjct: 216 NYIFMENQSTNTRTNFLYSKSIIHSMMPTSSQMLCVTSQFHVLRA 260
>gi|16763488|ref|NP_459103.1| secreted protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|205351438|ref|YP_002225239.1| secreted protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207855611|ref|YP_002242262.1| hypothetical protein SEN0100 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|16418596|gb|AAL19062.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|205271219|emb|CAR36007.1| probable secreted protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206707414|emb|CAR31687.1| probable secreted protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261245331|emb|CBG23119.1| probable secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|301156727|emb|CBW16201.1| probable secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911068|dbj|BAJ35042.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|323128416|gb|ADX15846.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326621795|gb|EGE28140.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326626461|gb|EGE32804.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332987050|gb|AEF06033.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 206
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P FQ+ R+ + LY+ QH + ++++GG ++++ + +LE G+ I
Sbjct: 57 PVFQA--RLDHAIWLYQ---QHIVRA-LVLTGGYGAGATVSDAAIARQYVLEKGIPAKAI 110
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+E +S T +N +++ +++ Q + +LVS H+ R + Q GI++++S
Sbjct: 111 FIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSRSS 164
>gi|224581941|ref|YP_002635739.1| secreted protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224466468|gb|ACN44298.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 237
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P FQ+ R+ + LY+ QH + ++++GG ++++ + +LE G+ I
Sbjct: 88 PVFQA--RLDHAIWLYQ---QHIVRA-LVLTGGYGAGATVSDAAIARQYVLEKGIPAKAI 141
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+E +S T +N +++ +++ Q + +LVS H+ R + Q GI++++S +
Sbjct: 142 FIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSRSSPT 197
>gi|239630563|ref|ZP_04673594.1| transporter [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301067717|ref|YP_003789740.1| hypothetical protein LCAZH_2704 [Lactobacillus casei str. Zhang]
gi|239526846|gb|EEQ65847.1| transporter [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300440124|gb|ADK19890.1| conserved hypothetical protein [Lactobacillus casei str. Zhang]
Length = 360
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
P +++P+ + I K+ K++ I+++GG P+ + L E+ V L+ G
Sbjct: 196 PNGKMQPTMKKRLEI-----ALKAAKKYP-KSKILVAGGVPE-NKLTEATVMQKWLVAHG 248
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ + ++LE S +T +NA FS + + + L++SA H++R+ L ++ G
Sbjct: 249 IAKKRVELEDLSTNTVENALFSVRELVDRGATSATLITSATHMRRAFLLYRMAG 302
>gi|116805286|gb|ABK27699.1| hypothetical protein [Lactobacillus paracasei]
Length = 363
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
P +++P+ + I K+ K++ I+++GG P+ + L E+ V L+ G
Sbjct: 199 PNGKMQPTMKKRLEI-----ALKAAKKYP-KSKILVAGGVPE-NKLTEATVMQKWLVAHG 251
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ + ++LE S +T +NA FS + + + L++SA H++R+ L ++ G
Sbjct: 252 IAKKRVELEDLSTNTVENALFSVRELVDRGATSATLITSATHMRRAFLLYRMAG 305
>gi|195873701|ref|ZP_02698260.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|195632873|gb|EDX51327.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
Length = 237
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P FQ+ R+ + LY+ QH + ++++GG ++++ + +LE G+ I
Sbjct: 88 PVFQA--RLDHAIWLYQ---QHIVRA-LVLTGGYGAGATVSDAAIARQYVLEKGIPAKAI 141
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+E +S T +N +++ +++ Q + +LVS H+ R + Q GI++++S +
Sbjct: 142 FIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSRSSPT 197
>gi|161612436|ref|YP_001586401.1| hypothetical protein SPAB_00125 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194469326|ref|ZP_03075310.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197262481|ref|ZP_03162555.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|198242615|ref|YP_002214051.1| hypothetical protein SeD_A0103 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205357053|ref|ZP_02344474.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205357529|ref|ZP_02571064.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205358348|ref|ZP_02655427.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|161361800|gb|ABX65568.1| hypothetical protein SPAB_00125 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194455690|gb|EDX44529.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197240736|gb|EDY23356.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197937131|gb|ACH74464.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205324427|gb|EDZ12266.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205331506|gb|EDZ18270.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205335130|gb|EDZ21894.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|321222331|gb|EFX47403.1| Putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
Length = 237
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P FQ+ R+ + LY+ QH + ++++GG ++++ + +LE G+ I
Sbjct: 88 PVFQA--RLDHAIWLYQ---QHIVRA-LVLTGGYGAGATVSDAAIARQYVLEKGIPAKAI 141
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+E +S T +N +++ +++ Q + +LVS H+ R + Q GI++++S +
Sbjct: 142 FIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSRSSPT 197
>gi|42780808|ref|NP_978055.1| hypothetical protein BCE_1734 [Bacillus cereus ATCC 10987]
gi|42736728|gb|AAS40663.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 192
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 35 FIGWGIIPTILLKHLQFS-YQRPLLSPQWKKDGNIIVLLG---NGTTIIPTIPAIRIEPS 90
IG ++ + + LQ++ Y+ ++ ++ D I++LG NGT +PS
Sbjct: 10 MIGMIMVCAVYVGFLQYNIYKHGQMNATYEAD--YIIVLGSKVNGT-----------KPS 56
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
+ RI + K+ ++ I+SGG + ++E++ N+L++ + D I +
Sbjct: 57 YSLQYRIDKAAEYLKAHEK----AIAIVSGGKGKGEDISEALAMKNELIKLKIAEDRIIM 112
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E +S T +N +FS +I + K +I V++ +H+ R++
Sbjct: 113 EDKSTSTDENIKFSKPLIPDNMKKGLI-VTNDFHMFRAK 150
>gi|296103078|ref|YP_003613224.1| hypothetical protein ECL_02734 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295057537|gb|ADF62275.1| hypothetical protein ECL_02734 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 259
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 34/211 (16%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIF 98
LL+ ++ +Y P W+ + + IV+LG G T P PS S R+
Sbjct: 62 LLRPIENTY------PTWQGNQKVEYIVVLGGGYTWDPNW-----APSSNLINNSLPRLN 110
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDT 157
E +RL+ + M T G P K + ++ ES GV R I +LD+
Sbjct: 111 EGIRLWLANPGSKMIFT-----GAPAKTNPVSTAEAGARVAESLGVPRSAII----TLDS 161
Query: 158 FQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAY 210
++ + ++ +K G +LV+SA HL R+ ++F+ G++ + ++ LN +
Sbjct: 162 PKDTEEEAAAVKQAIGDVPFLLVTSASHLPRAMIFFEKQGLHPLPAPANQMAINAPLNPW 221
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+IP ++ E +G + + +G+
Sbjct: 222 ERVIPSPMWLMHSDRVGYETLGRIWQWLKGS 252
>gi|260900089|ref|ZP_05908484.1| transporter [Vibrio parahaemolyticus AQ4037]
gi|308110058|gb|EFO47598.1| transporter [Vibrio parahaemolyticus AQ4037]
Length = 365
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P + + E + + + + II++GG P+ H E + + L+ GV +D
Sbjct: 202 LNPDGSMHQILVERLETTLAMAKANPDAIIILTGGVPKNHK-TEGKLMADWLIGKGVSKD 260
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
I E + T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 261 RIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFE 307
>gi|240948368|ref|ZP_04752754.1| hypothetical protein AM305_05929 [Actinobacillus minor NM305]
gi|240297407|gb|EER47948.1| hypothetical protein AM305_05929 [Actinobacillus minor NM305]
Length = 247
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 12/142 (8%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E MR Y + I+ +G P + AE I K + + +E+Q+ T
Sbjct: 106 LERMR-YAAYLHKETQLPILATGSAPNGNSEAEIIA---KEFKQFFDVPTKWIESQAKTT 161
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH-------FGINTKASCSDYLNAY 210
+NA ++ ++K I+LV+ +H++R++L F+ G+ + S+Y+N
Sbjct: 162 KENALYTKDILKKEGINTIVLVTQNWHMQRAKLLFEQQGFHVLPAGVGYGKTPSEYINFM 221
Query: 211 YSIIPLSANFYLTELALKEYIG 232
Y +P S L LKE++G
Sbjct: 222 Y-FVPQSGAMDNIMLFLKEWLG 242
>gi|296502298|ref|YP_003663998.1| hypothetical protein BMB171_C1462 [Bacillus thuringiensis BMB171]
gi|296323350|gb|ADH06278.1| putative cytoplasmic protein [Bacillus thuringiensis BMB171]
Length = 192
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG NGT +PS+ RI + KS + I+SGG
Sbjct: 39 EADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHDK----AIAIVSGG 83
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 84 KGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 142
Query: 182 AYHLKRSQLYFQHFGI 197
+H+ R++ + G+
Sbjct: 143 DFHMFRAKKIAEKQGL 158
>gi|322615919|gb|EFY12836.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322620704|gb|EFY17564.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623945|gb|EFY20782.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627393|gb|EFY24184.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322630700|gb|EFY27464.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638080|gb|EFY34781.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640566|gb|EFY37217.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647705|gb|EFY44190.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322648055|gb|EFY44522.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322656912|gb|EFY53198.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657377|gb|EFY53649.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663697|gb|EFY59897.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666530|gb|EFY62708.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322672311|gb|EFY68423.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676377|gb|EFY72448.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322679530|gb|EFY75575.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686141|gb|EFY82125.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323194985|gb|EFZ80171.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323200106|gb|EFZ85193.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323201073|gb|EFZ86142.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323209470|gb|EFZ94403.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323212278|gb|EFZ97102.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323216583|gb|EGA01309.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222478|gb|EGA06848.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225789|gb|EGA10009.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323228670|gb|EGA12799.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236716|gb|EGA20792.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239783|gb|EGA23830.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323242169|gb|EGA26198.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249406|gb|EGA33322.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252259|gb|EGA36110.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256650|gb|EGA40380.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261316|gb|EGA44903.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265504|gb|EGA49000.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323271708|gb|EGA55126.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 206
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P FQ+ R+ + LY+ QH + ++++GG ++++ + +LE G+ I
Sbjct: 57 PVFQA--RLDHAIWLYQ---QHIVRA-LVLTGGYGAGATVSDAAIARQYVLEKGIPAKAI 110
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+E +S T +N +++ +++ Q + +LVS H+ R + Q GI++++S
Sbjct: 111 FIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSRSS 164
>gi|229544814|ref|ZP_04433539.1| conserved hypothetical protein [Enterococcus faecalis TX1322]
gi|256854151|ref|ZP_05559516.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|229310086|gb|EEN76073.1| conserved hypothetical protein [Enterococcus faecalis TX1322]
gi|256711094|gb|EEU26137.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|315030796|gb|EFT42728.1| conserved hypothetical protein [Enterococcus faecalis TX4000]
Length = 193
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
KQH +I+SGG E+ V LL GV I LE ++ T +N S +
Sbjct: 74 KQHP-ETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL 132
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
K +++V+S +H+ RSQL + GI+
Sbjct: 133 ---FSFKRLVIVTSDFHMYRSQLLAKRAGIS 160
>gi|194446096|ref|YP_002039329.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194404759|gb|ACF64981.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 206
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P FQ+ R+ + LY+ QH + ++++GG ++++ + +LE G+ I
Sbjct: 57 PVFQA--RLDHAIWLYQ---QHIVRA-LVLTGGYGAGATVSDAAIARQYVLEKGIPAKAI 110
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+E +S T +N +++ +++ Q + +LVS H+ R + Q GI++++S
Sbjct: 111 FIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSRSS 164
>gi|148241215|ref|YP_001226372.1| hypothetical protein SynRCC307_0116 [Synechococcus sp. RCC307]
gi|147849525|emb|CAK27019.1| Uncharacterised conserved membrane protein [Synechococcus sp.
RCC307]
Length = 265
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 103/245 (42%), Gaps = 46/245 (18%)
Query: 29 FMLLFSFIGWGII-----PTI---LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ L S GW +I P + LL+ L+ Q L+P+ + + +++LG G P
Sbjct: 34 WALPLSITGWLVIAVPAMPVVSDALLRQLE--DQAASLTPKSLPEADAVLVLGGGIRPAP 91
Query: 81 TI-PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG--------DPQKHGLAES 131
+ + ++ R+ +RL++ K ++I+ G DP +A
Sbjct: 92 AKGQGVEVN---EAGDRLLCGVRLWRQGK-----APVLITSGARVSFTLNDP----IAPE 139
Query: 132 IVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
V + +L E GV + L ++ T + AQ + + K +ILV+SA+H+ R+
Sbjct: 140 AVLSQQLAQELGVPASALLLNEKARTTAEEAQRINQLAAEQGWKQLILVTSAFHMPRALA 199
Query: 191 YFQHFG-INTKASCSDY------LNAYYS-------IIPLSANFYLTELALKEYIGILIA 236
F+ + DY N +S +IP S T LKE++G+L+
Sbjct: 200 SFKRQSELQIIPVACDYQLDPQHQNQAFSWGELLIDLIPSSDALDQTTQVLKEHLGLLVY 259
Query: 237 YYRGN 241
RG
Sbjct: 260 QLRGQ 264
>gi|228984797|ref|ZP_04144969.1| hypothetical protein bthur0001_14980 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229155285|ref|ZP_04283396.1| hypothetical protein bcere0010_14780 [Bacillus cereus ATCC 4342]
gi|228628210|gb|EEK84926.1| hypothetical protein bcere0010_14780 [Bacillus cereus ATCC 4342]
gi|228774995|gb|EEM23389.1| hypothetical protein bthur0001_14980 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 194
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 41 EADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----AIAIVSGG 85
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 86 KGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 144
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 145 DFHMFRAK 152
>gi|226327284|ref|ZP_03802802.1| hypothetical protein PROPEN_01151 [Proteus penneri ATCC 35198]
gi|225204502|gb|EEG86856.1| hypothetical protein PROPEN_01151 [Proteus penneri ATCC 35198]
Length = 379
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
KD N IV LG T+ I IE R+ +T+ + K I+++GG P
Sbjct: 204 KDNNAIVTLGYALNPDGTMNKILIE-------RLNKTLEVAKQLP----DAMIVVTGGVP 252
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ H E + + L+++G+ + I E + T +NA FS + + K +++SS
Sbjct: 253 KAHQ-TEGKLMADWLVKNGIAPERIFQENYARTTVENALFSRYALTKHRIKTAVIISSGS 311
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
H++R+ F + S YL PL+
Sbjct: 312 HVRRADAIFTIASWQSGPSDISYLTVVAPDKPLA 345
>gi|261391563|emb|CAX48996.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
8013]
Length = 218
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + I+ +GG +K + E+ V L+ GV
Sbjct: 66 RPSPVFRE--RINHAIALYQSRRVGK----IVFTGGRTKKGYMTEAEVGRRYALKQGVPA 119
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+I E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 120 RNILFENTSRNTYENLNNIRPVLRANGIDSVVIVSDPYHLARAAEMAEDLGVRVYMSAT 178
>gi|256843931|ref|ZP_05549418.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256849507|ref|ZP_05554939.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|293381368|ref|ZP_06627369.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
gi|312983993|ref|ZP_07791342.1| putative membrane protein [Lactobacillus crispatus CTV-05]
gi|256613836|gb|EEU19038.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256713623|gb|EEU28612.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|290922058|gb|EFD99059.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
gi|310894670|gb|EFQ43743.1| putative membrane protein [Lactobacillus crispatus CTV-05]
Length = 343
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 18/138 (13%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G I ++ P + RI + +Y + I+SGG +
Sbjct: 177 IVVLGAG------IMGTKVTPLLAA--RISRGIEIYHKNPGSKL----IMSGGQGPGEDI 224
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E++ + G+ ++DI +E +S T QN QFS +++K +V+S+YH+ R+
Sbjct: 225 PEAVAMAEYAEKLGINKNDIIIENKSKTTQQNLQFSHALMK--PNSRFCIVTSSYHVYRA 282
Query: 189 QLYFQHFGINTKASCSDY 206
+ + G+ C+ Y
Sbjct: 283 LVLAKRQGLK----CTGY 296
>gi|145299864|ref|YP_001142705.1| hypothetical protein ASA_2954 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142852636|gb|ABO90957.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 367
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
ET R S Q + II++GG PQ E + + L++ GV+R I E + T
Sbjct: 218 LETTR---SLAQANPAALIILTGGVPQNR-QTEGKLMADWLVKKGVDRSRIIEENYATST 273
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
+NA +S + Q + LVSSA H++R Q + + + + Y PLS
Sbjct: 274 VENALYSGYALARHQIQYATLVSSASHVRRGQTLLEIACWQSGPTGIQIDSVSYPDKPLS 333
Query: 218 ANFYLTELALKEYIGI 233
A L +++ E +GI
Sbjct: 334 A---LAKVSDSELLGI 346
>gi|28901535|ref|NP_801190.1| hypothetical protein VPA1680 [Vibrio parahaemolyticus RIMD 2210633]
gi|260363086|ref|ZP_05775955.1| transporter [Vibrio parahaemolyticus K5030]
gi|260880373|ref|ZP_05892728.1| transporter [Vibrio parahaemolyticus AN-5034]
gi|260894740|ref|ZP_05903236.1| transporter [Vibrio parahaemolyticus Peru-466]
gi|28810082|dbj|BAC63023.1| putative exported protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308089437|gb|EFO39132.1| transporter [Vibrio parahaemolyticus Peru-466]
gi|308092057|gb|EFO41752.1| transporter [Vibrio parahaemolyticus AN-5034]
gi|308112354|gb|EFO49894.1| transporter [Vibrio parahaemolyticus K5030]
Length = 365
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P + + E + + + + II++GG P+ H E + + L+ GV +D
Sbjct: 202 LNPDGSMHQILVERLETTLAMAKANPDAIIILTGGVPKNHK-TEGKLMADWLIGKGVSKD 260
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
I E + T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 261 RIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFE 307
>gi|323185374|gb|EFZ70738.1| hypothetical protein ECOK1357_1327 [Escherichia coli 1357]
Length = 248
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 24/183 (13%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
IV+LG G T P + PS S R+ E +RL++ + +I +GG +
Sbjct: 71 IVVLGGGYTWNP-----QWAPSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGIAK 121
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAY 183
+ ++ + V GV R+ I +LD ++ + ++ +K G +LV+SA
Sbjct: 122 TNTVSTAEVGARVAQSLGVPREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSAS 177
Query: 184 HLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAY 237
HL R+ ++FQ G+N + ++ LN + IP ++ E +G + +
Sbjct: 178 HLPRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQW 237
Query: 238 YRG 240
+G
Sbjct: 238 LKG 240
>gi|152978996|ref|YP_001344625.1| hypothetical protein Asuc_1330 [Actinobacillus succinogenes 130Z]
gi|150840719|gb|ABR74690.1| protein of unknown function DUF218 [Actinobacillus succinogenes
130Z]
Length = 274
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 34/185 (18%)
Query: 64 KDGNIIVLLGNG--------TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
++ IV+LG G TI T+P + + E MR Y +
Sbjct: 102 RNAQAIVILGGGLRDSKELFNTI--TVPGL-----------VLERMR-YAAYLHKETELP 147
Query: 116 IIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
I+ISG P +G +E+ V + G++ LE +S +T QNA +S +++ K
Sbjct: 148 ILISGASP--NGNSEAKVMGQEFFTFFGIQPK--WLEERSTNTKQNALYSKEILERENIK 203
Query: 175 NIILVSSAYHLKRSQLYFQHFGINT-KASCS------DYLNAYYSIIPLSANFYLTELAL 227
I+L+++ +H++R+++ F+ G AS Y + IP + L
Sbjct: 204 RIVLITNQWHMQRAKMLFEKQGFEVLPASVGPGIVPVSYEHNAMHFIPQAGALNANMQLL 263
Query: 228 KEYIG 232
KE+IG
Sbjct: 264 KEWIG 268
>gi|94264712|ref|ZP_01288492.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93454821|gb|EAT05071.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 96
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 10/88 (11%)
Query: 159 QNAQFSSSMIKNMQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL- 216
+NA +++ ++ GK+ ++LV+SA H+ RS F+ GIN + +D+ + PL
Sbjct: 11 ENALYTAPLV----GKHPVLLVTSAQHMPRSLATFRAVGINAVPAPTDFEVIPQPLHPLR 66
Query: 217 ----SANFYLTELALKEYIGILIAYYRG 240
+ + + + ALKEY+G+L+ RG
Sbjct: 67 LLPDAHSLHQSTSALKEYLGLLVYRLRG 94
>gi|331656991|ref|ZP_08357953.1| putative KicA protein [Escherichia coli TA206]
gi|331055239|gb|EGI27248.1| putative KicA protein [Escherichia coli TA206]
Length = 270
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 28/225 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNI--IVLLGNGTTIIPTIPAIRI 87
+F IGW + + L+ + RP+ S P W + IV+LG G T P +
Sbjct: 52 IFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNP-----QW 106
Query: 88 EPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS S R+ E +RL++ + +I +GG + + ++ + V GV
Sbjct: 107 APSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGV 162
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ I +LD ++ + ++ +K G +LV+SA HL R+ ++FQ G+N +
Sbjct: 163 PCEQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA 218
Query: 203 CSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++ LN + IP ++ E +G + + +G+
Sbjct: 219 PANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 263
>gi|322435976|ref|YP_004218188.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
gi|321163703|gb|ADW69408.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
Length = 218
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS ++R+ + LY+ + I GG + G E V + LL +G+ D I
Sbjct: 75 PSPVYHARLDHAVTLYR---KQIAPIVITFGGGSDKDSGKTEGGVGRDYLLANGIPFDKI 131
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
ET S+DT Q + + + + +I+LVS HL R Q + G++ S
Sbjct: 132 IAETHSVDTEQQVELLAQIAEENNLSHIVLVSDNTHLFRIQELCRRAGLDVYTS 185
>gi|257876412|ref|ZP_05656065.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
gi|257810578|gb|EEV39398.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
Length = 371
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
II++GG P+K E+ + + L+E+G++ I E + DT +NA FS + +
Sbjct: 231 AKIIVTGGVPKKEN-TEAKLMHQWLIENGIDEKRIIQEALATDTIENALFSIDLANELDF 289
Query: 174 KN-IILVSSAYHLKRSQLYFQ 193
N I ++SSA H++R ++ F+
Sbjct: 290 SNKITVISSASHVRRGKVLFE 310
>gi|229183906|ref|ZP_04311122.1| hypothetical protein bcere0004_14730 [Bacillus cereus BGSC 6E1]
gi|228599558|gb|EEK57162.1| hypothetical protein bcere0004_14730 [Bacillus cereus BGSC 6E1]
Length = 159
Score = 43.9 bits (102), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 6 EADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----AIAIVSGG 50
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 51 KGKGEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 109
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 110 DFHMFRAK 117
>gi|210623051|ref|ZP_03293538.1| hypothetical protein CLOHIR_01488 [Clostridium hiranonis DSM 13275]
gi|210153854|gb|EEA84860.1| hypothetical protein CLOHIR_01488 [Clostridium hiranonis DSM 13275]
Length = 251
Score = 43.9 bits (102), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
EP R+ + KS + C I++SGG ++E+ L+E G++ +
Sbjct: 101 EPGLTLKGRLDRALEYVKS---NDDDCKIVVSGGKGDGENISEAEAMKRYLVERGIKPEM 157
Query: 148 IKLETQSLDTFQNAQFSSSMIKN 170
I E +S++T QN +FS I+N
Sbjct: 158 IIKEDKSVNTMQNFEFSRDKIEN 180
>gi|15602371|ref|NP_245443.1| hypothetical protein PM0506 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720766|gb|AAK02590.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 247
Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI------FETMRLYKSCKQHSMHCTII 117
+ IVLLG G + S + Y ++ E +R Y + Q ++
Sbjct: 76 QQAQAIVLLGGG-----------LRDSKELYDKLTVSAIPLERVR-YAAYLQKQTQLPLL 123
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
I+G P+ G++E+ + N+L + +E ++ T +NA FS +++ K +I
Sbjct: 124 ITGSSPK--GISEAQIMANEL-NTFFSVPTTWVEGKARTTKENALFSREILEKEGIKRVI 180
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDY--------LNAYYSIIPLSANFYLTELALKE 229
+V++ +H++R++L F+ G + + LN Y IP + L LKE
Sbjct: 181 VVTNQWHMQRAKLLFEQQGFEVLPASVGHGISPQSYGLNVMY-FIPQAGALNKNMLLLKE 239
Query: 230 YIG 232
++G
Sbjct: 240 WLG 242
>gi|228957994|ref|ZP_04119731.1| hypothetical protein bthur0005_15050 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228801701|gb|EEM48581.1| hypothetical protein bthur0005_15050 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 194
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
++PS+ RI + KS ++ I+SGG + ++E++ N+L++ + D
Sbjct: 55 MKPSYSLQYRIDKAAEYLKSHEK----AIAIVSGGKGKGEDISEALAMKNELMKLKIAED 110
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
I +E +S T +N +FS +I + K +I V++ +H+ R++
Sbjct: 111 RIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFHMFRAK 152
>gi|209809505|ref|YP_002265043.1| hypothetical protein VSAL_II0731 [Aliivibrio salmonicida LFI1238]
gi|208011067|emb|CAQ81485.1| putative membrane protein [Aliivibrio salmonicida LFI1238]
Length = 287
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 19/194 (9%)
Query: 19 SIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
S RK F + F+L S +G + I T LLK + Y ++P + +++LG
Sbjct: 32 SKRKGF--ASFLLTLSLVGIFLLSFQPITTPLLKSTERMYPS-FIAPDVPVE--YVLVLG 86
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
NG + I I E S + R+ E + +Y+ + + SGG H + V
Sbjct: 87 NGHVVDDEISPIS-ELSRAAVMRLTEGIHIYRMYPGAKLILSGY-SGGTTVSHARMMARV 144
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L GV + DI L + DT + A + + + N N++LV+SA H+ R+ F
Sbjct: 145 A----LSLGVNKSDILLLENARDTHEEAIQTLNSVGN---SNLVLVTSASHMPRAMEEFH 197
Query: 194 HFGINTKASCSDYL 207
+ G+ + ++YL
Sbjct: 198 NLGLKPTPAPTNYL 211
>gi|296446397|ref|ZP_06888341.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
gi|296256032|gb|EFH03115.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
Length = 265
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSF-QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--K 125
IV+LG + I A R +F ++ R+ + L + Q ++ SGG +
Sbjct: 82 IVVLGG--AMDEHITAARGRAAFNEAGERLLAFVELARRYPQ----ARLVFSGGSASLTE 135
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
E+ E+G+ + + E +S +T++NA ++ + + + +LV+SA H+
Sbjct: 136 ARFTEADAAAVFFREAGLAPERVLYENRSRNTWENAVYTRDLARPASSERWLLVTSAAHM 195
Query: 186 KRSQLYFQHFGINTKASCSDYLNA---YYSIIP---LSANFYLTELALKEYIGILIAYYR 239
R+ F+ G A DY +S+ P ++ + A E+IG+ + ++
Sbjct: 196 PRAMGIFRQVGFPATAFPVDYRTTGHIGWSLRPDKHIADGLAFFDTAAHEWIGLAVYHWT 255
Query: 240 GN 241
G
Sbjct: 256 GK 257
>gi|195977434|ref|YP_002122678.1| hypothetical protein Sez_0289 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195974139|gb|ACG61665.1| hypothetical protein Sez_0289 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 342
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 20/128 (15%)
Query: 63 KKDGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K + I++LG NG + P + A RI Q Y + + +I+S
Sbjct: 165 KTKEDYIIVLGSGLNGDQVTPLL-ASRINKGIQVYRK--------------NPGSKLIMS 209
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG +AE ++ G++ +DI +E QS +T +N FS +I G + LV
Sbjct: 210 GGKGADELIAEGEAMCRYAVQQGIKSEDILVENQSRNTRENILFSKQLIP--AGASFCLV 267
Query: 180 SSAYHLKR 187
++ YHL R
Sbjct: 268 TNRYHLFR 275
>gi|83593886|ref|YP_427638.1| hypothetical protein Rru_A2551 [Rhodospirillum rubrum ATCC 11170]
gi|83576800|gb|ABC23351.1| Protein of unknown function DUF218 [Rhodospirillum rubrum ATCC
11170]
Length = 206
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
PS R+ + L ++H +++SGG L E+ V L +G+ +
Sbjct: 43 RPSPALERRVLHGVAL---ARRHPA-ARLLLSGGA-TGGPLDEAWVMATLALGAGIAAER 97
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
+ LE ++LDT NA+ S +++ + ++LV+ H+ R+ L F +A D+L
Sbjct: 98 LILEDRALDTLGNARHSLPLLRAARIGRVLLVTDPSHMPRALLSF-------RAVAGDHL 150
Query: 208 NAYYSIIPLSANFYLTELAL 227
+ P A + A+
Sbjct: 151 RLRAAPTPCPAGGWRNRRAI 170
>gi|261251880|ref|ZP_05944454.1| hypothetical protein VIA_001901 [Vibrio orientalis CIP 102891]
gi|260938753|gb|EEX94741.1| hypothetical protein VIA_001901 [Vibrio orientalis CIP 102891]
Length = 365
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 8/138 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ T+++ K + I+++GG P+ H E + + L+E G++++ I E +
Sbjct: 215 RLETTLQMAKD----NPDALIVLTGGVPKNHK-TEGKLMADWLIEKGIKKERIIEENYAT 269
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T NA FSS + ++ ++SSA H++R Q F+ T + Y P
Sbjct: 270 STVGNALFSSYALARHNIQHATIISSASHVRRGQTLFEIASWQTGPQDITFDTVSYPDKP 329
Query: 216 LSANFYLTELALKEYIGI 233
L LT+ + E +GI
Sbjct: 330 LKE---LTKASASELLGI 344
>gi|78484758|ref|YP_390683.1| hypothetical protein Tcr_0413 [Thiomicrospira crunogena XCL-2]
gi|78363044|gb|ABB41009.1| Conserved hypothetical protein; predicted membrane protein with
DUF218 [Thiomicrospira crunogena XCL-2]
Length = 272
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 111/256 (43%), Gaps = 27/256 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFM-------SCFMLLFSFIGWGI----IPTILLKHLQF 51
++W FL S L+ + +F + F+L S G+ + I +L++ L+
Sbjct: 11 IAWAFLSPSNIILILLILGSVFLLFNRIQTAKTFLLPASLAGFIVLAFPIGDLLIQPLEQ 70
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
++ P P+ DG I++LG G + ++ R E I K H
Sbjct: 71 RFKAPDTLPK-HIDG--IIVLGGGEDLKRSLSWGRPELGIGGDRYIGA-----KELATHY 122
Query: 112 MHCTIIISGGDPQ---KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+I +GG ++ E + L G+ + +E+ S +T++N +F+ +++
Sbjct: 123 PKAPVIFTGGSGSMQLQNTQGEGSLARQLLTTLGITDKRLIIESLSRNTYENFKFTKALL 182
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFY----LTE 224
+ G +LV+SA+H+ RS + I+ DY + + + +F+ E
Sbjct: 183 PDANG-TYLLVTSAFHMPRSVGIANNQNIHVIPYPVDYRSNSEKLRQIDFDFFDHLKSLE 241
Query: 225 LALKEYIGILIAYYRG 240
A KE+IG+ + Y+ G
Sbjct: 242 PAWKEWIGLTVYYWTG 257
>gi|30019764|ref|NP_831395.1| putative cytoplasmic protein [Bacillus cereus ATCC 14579]
gi|229127043|ref|ZP_04256042.1| hypothetical protein bcere0015_14980 [Bacillus cereus BDRD-Cer4]
gi|29895309|gb|AAP08596.1| hypothetical Cytosolic Protein [Bacillus cereus ATCC 14579]
gi|228656396|gb|EEL12235.1| hypothetical protein bcere0015_14980 [Bacillus cereus BDRD-Cer4]
Length = 194
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG NGT +PS+ RI + KS + I+SGG
Sbjct: 41 EADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHDK----AIAIVSGG 85
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 86 KGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 144
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 145 DFHMFRAK 152
>gi|283833789|ref|ZP_06353530.1| putative KicA protein [Citrobacter youngae ATCC 29220]
gi|291070454|gb|EFE08563.1| putative KicA protein [Citrobacter youngae ATCC 29220]
Length = 254
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 97/210 (46%), Gaps = 34/210 (16%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIF 98
LLK ++ SY P W+ + IV+LG G T P + PS S R+
Sbjct: 62 LLKPIEDSY------PTWQDTQKVEYIVVLGGGYTWNP-----QWAPSSNLINNSLPRLN 110
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDT 157
E +RL+++ + +I +G + + ++ + ++ ES G+ R +I +LD
Sbjct: 111 EGIRLWRA----NPGSKLIFTGAAAKTNNVSTAEA-GARVAESLGIPRSEII----TLDK 161
Query: 158 FQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAY 210
++ + ++ +K+ G +LV+SA HL R+ ++FQ G++ + ++ LN +
Sbjct: 162 PKDTEEEAAAVKHAIGDAPFLLVTSASHLPRAMIFFQQAGLHPLPAPANQLAIDSPLNPW 221
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYRG 240
IP ++ E +G + + +G
Sbjct: 222 ERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|294671368|ref|ZP_06736218.1| hypothetical protein NEIELOOT_03076 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291306916|gb|EFE48159.1| hypothetical protein NEIELOOT_03076 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 202
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGG G E+ + + GV D I++E +S T++N FS+ ++ + + II
Sbjct: 1 MSGGT-DGDGSNEAEAMRDMAVSMGVPADKIRIEPRSESTYENIAFSAPLLHDAE--QII 57
Query: 178 LVSSAYHLKRSQ-LYFQHFGINT-----KASCSDYLNAY 210
+VS A+HL R++ L +H+ T SC D Y
Sbjct: 58 IVSDAFHLARAEWLAKRHWPGKTVRLHASGSCGDSTPNY 96
>gi|218295589|ref|ZP_03496385.1| protein of unknown function DUF218 [Thermus aquaticus Y51MC23]
gi|218243748|gb|EED10275.1| protein of unknown function DUF218 [Thermus aquaticus Y51MC23]
Length = 211
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
LLSP + IV+LG R P+ + R+ + LY Q + I
Sbjct: 13 LLSPVLAAEYAWIVVLGAAQY------GGRPSPALER--RLLAALALY----QKGLAPRI 60
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++GG L+E L+ GV ++ + ET+S T+QN F + +++G+ I
Sbjct: 61 AVAGGKAAGDTLSEGEAGCRYLMARGVPQEALLCETRSQSTYQNLLF---LRPHLEGR-I 116
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKA 201
+LV+ A HL R+ + G+ +
Sbjct: 117 LLVTDAPHLPRALFLARLLGLKAEG 141
>gi|304388801|ref|ZP_07370857.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
gi|304337253|gb|EFM03431.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
Length = 218
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + I+ +GG +K + E+ V L+ GV
Sbjct: 66 RPSPVFRE--RINHAIALYQSRRVGK----IVFTGGRTKKGYMTEAEVGRRYALKQGVPA 119
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+I E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 120 RNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSAT 178
>gi|161620495|ref|YP_001594381.1| hypothetical protein BCAN_B0429 [Brucella canis ATCC 23365]
gi|163844593|ref|YP_001622248.1| hypothetical protein BSUIS_B0427 [Brucella suis ATCC 23445]
gi|225686235|ref|YP_002734207.1| hypothetical protein BMEA_B0404 [Brucella melitensis ATCC 23457]
gi|254699682|ref|ZP_05161510.1| hypothetical protein Bsuib55_02296 [Brucella suis bv. 5 str. 513]
gi|254702819|ref|ZP_05164647.1| hypothetical protein Bsuib36_02539 [Brucella suis bv. 3 str. 686]
gi|256015209|ref|YP_003105218.1| Bme2 protein [Brucella microti CCM 4915]
gi|256043322|ref|ZP_05446257.1| hypothetical protein Bmelb1R_02479 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256111677|ref|ZP_05452661.1| hypothetical protein Bmelb3E_03418 [Brucella melitensis bv. 3 str.
Ether]
gi|256262633|ref|ZP_05465165.1| Bme2 [Brucella melitensis bv. 2 str. 63/9]
gi|260564530|ref|ZP_05835015.1| Bme2 protein [Brucella melitensis bv. 1 str. 16M]
gi|260568269|ref|ZP_05838738.1| Bme2 protein [Brucella suis bv. 4 str. 40]
gi|261750147|ref|ZP_05993856.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261753420|ref|ZP_05997129.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265989745|ref|ZP_06102302.1| Bme2 [Brucella melitensis bv. 1 str. Rev.1]
gi|265993148|ref|ZP_06105705.1| Bme2 [Brucella melitensis bv. 3 str. Ether]
gi|294853761|ref|ZP_06794433.1| hypothetical protein BAZG_02742 [Brucella sp. NVSL 07-0026]
gi|297250207|ref|ZP_06933894.1| hypothetical protein BAYG_03205 [Brucella abortus bv. 5 str. B3196]
gi|5478233|gb|AAD43833.1|AF076290_2 Bme2 [Brucella melitensis]
gi|161337306|gb|ABX63610.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
gi|163675316|gb|ABY39426.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|225642340|gb|ACO02253.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
gi|255997869|gb|ACU49556.1| Bme2 protein [Brucella microti CCM 4915]
gi|260152173|gb|EEW87266.1| Bme2 protein [Brucella melitensis bv. 1 str. 16M]
gi|260154934|gb|EEW90015.1| Bme2 protein [Brucella suis bv. 4 str. 40]
gi|261739900|gb|EEY27826.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261743173|gb|EEY31099.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262764018|gb|EEZ10050.1| Bme2 [Brucella melitensis bv. 3 str. Ether]
gi|263000414|gb|EEZ13104.1| Bme2 [Brucella melitensis bv. 1 str. Rev.1]
gi|263092418|gb|EEZ16671.1| Bme2 [Brucella melitensis bv. 2 str. 63/9]
gi|294819416|gb|EFG36416.1| hypothetical protein BAZG_02742 [Brucella sp. NVSL 07-0026]
gi|297172960|gb|EFH32338.1| hypothetical protein BAYG_03205 [Brucella abortus bv. 5 str. B3196]
gi|326410585|gb|ADZ67649.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326553876|gb|ADZ88515.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 205
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 69/150 (46%), Gaps = 24/150 (16%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
I P R + +L+K + I++ GD + ++ + ++ GV
Sbjct: 37 IVPGGDGAPRAAQAAQLWKDGRS-----PYILATGD------GDCLLNKHIMMAKGVPPS 85
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ------HFGINTK 200
I +E +S T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+ HF ++
Sbjct: 86 AILVECRSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTACPQMHF-TSSP 144
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ +D + P + E +KEY
Sbjct: 145 VADADMPGGFPGTPP------VIEHVVKEY 168
>gi|237730883|ref|ZP_04561364.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226906422|gb|EEH92340.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 254
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 32/211 (15%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIF 98
LLK ++ SY P W+ + IV+LG G T P + PS S R+
Sbjct: 62 LLKPIEDSY------PTWQDTQKVEYIVVLGGGYTWNP-----QWAPSSNLISNSLPRLN 110
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
E +RL+++ + +I +G + + ++ + GV DI +LD
Sbjct: 111 EGIRLWRA----NPGSKLIFTGAAAKSNNVSTAEAGARVAQSLGVPPGDII----TLDKP 162
Query: 159 QNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYY 211
++ + ++ +K G +LV+SA HL R+ ++FQ G++ + ++ LN +
Sbjct: 163 KDTEEEAAAVKQAIGSAPFLLVTSASHLPRAMIFFQQAGLHPLPAPANQLAIDSPLNPWE 222
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYRGNR 242
IP ++ E +G + + +G+
Sbjct: 223 RAIPSPVWLMHSDRVGYETLGRIWQWLKGSE 253
>gi|149184051|ref|ZP_01862406.1| hypothetical protein BSG1_09543 [Bacillus sp. SG-1]
gi|148848239|gb|EDL62534.1| hypothetical protein BSG1_09543 [Bacillus sp. SG-1]
Length = 245
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQG 173
+I+SGG + + ES + L+ G+ + I E +S TF+N S ++ K +
Sbjct: 130 VIVSGGQGEGEDIPESTAMSRYLVSHGISSNRITEEDRSTTTFENLLNSKRILERKGAED 189
Query: 174 KNIILVSSAYHLKRSQLYFQHFGIN 198
I++++S YH+ R++L + G++
Sbjct: 190 DRILIITSDYHVFRAKLTGKKIGLD 214
>gi|225076794|ref|ZP_03719993.1| hypothetical protein NEIFLAOT_01845 [Neisseria flavescens
NRL30031/H210]
gi|224951892|gb|EEG33101.1| hypothetical protein NEIFLAOT_01845 [Neisseria flavescens
NRL30031/H210]
Length = 218
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + II +GG P+K + E+ V L+ G+
Sbjct: 65 RPSPVFRE--RINHAITLYQSHRV----GKIIFTGGTPKKGFMTEAEVGRRYALKQGIPA 118
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+I E S +T++N ++ +II+VS YHL R++ G++
Sbjct: 119 HNILFENTSRNTYENMLNIVPIMHANGVGSIIVVSDPYHLARAEEMAADLGLS 171
>gi|253699685|ref|YP_003020874.1| hypothetical protein GM21_1055 [Geobacter sp. M21]
gi|251774535|gb|ACT17116.1| protein of unknown function DUF218 [Geobacter sp. M21]
Length = 195
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 37/171 (21%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
M+ +LFS I +I +L + F Y+ LS + K I+VL G
Sbjct: 1 MALLKVLFSLIVLILIVLSVL-FVDFVYKTFSLSQRDVKTDAIVVLTG------------ 47
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAESIVYNNKLLESGV 143
R+ E ++LY+ + + + G DP +KH L G
Sbjct: 48 -------GRGRVEEGVKLYRGGRGK----LLFLIGVDPLVKKHELYR-----------GA 85
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+++ LE S +T +NA ++ MI + +I L++S YH+KRS + F++
Sbjct: 86 GAENVYLEKTSRNTLENAIYARDMITKHRVSSIKLITSRYHMKRSTILFRN 136
>gi|121635807|ref|YP_976052.1| putative periplasmic protein [Neisseria meningitidis FAM18]
gi|120867513|emb|CAM11290.1| putative periplasmic protein [Neisseria meningitidis FAM18]
gi|254672612|emb|CBA06344.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
gi|325131248|gb|EGC53960.1| hypothetical protein NMBM6190_2077 [Neisseria meningitidis M6190]
gi|325137422|gb|EGC60010.1| hypothetical protein NMBES14902_2053 [Neisseria meningitidis
ES14902]
Length = 218
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + I+ +GG +K + E+ V L+ GV
Sbjct: 66 RPSPVFRE--RINHAIALYQSRRVGK----IVFTGGRTKKGYMTEAEVGRRYALKQGVPA 119
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+I E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 120 RNILFENTSRNTYENLNNIRPVLRANGIDSVVIVSDPYHLARAAEMAEDLGVRVYMSAT 178
>gi|269119959|ref|YP_003308136.1| hypothetical protein Sterm_1340 [Sebaldella termitidis ATCC 33386]
gi|268613837|gb|ACZ08205.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 208
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 16/141 (11%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K+ ++ V+LG G + ++ P FQ RI + LYK + +I +GG
Sbjct: 37 KQPADVAVILGAGAS------DEKVSPVFQE--RINHGISLYK----NKYVKKLIFTGGT 84
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ + +++ ++ GV +DDI LE S+ T +N + + ++ ILVS
Sbjct: 85 GKGNQNSDAYTAMQYAIKQGVPKDDILLEEMSVITQENIKNAKMIMDKNSYHTAILVSDP 144
Query: 183 YHLKRSQLYFQHFGINTKASC 203
H+KR+ L + N+K C
Sbjct: 145 LHMKRAMLMAK----NSKIDC 161
>gi|23500175|ref|NP_699615.1| Bme2 protein [Brucella suis 1330]
gi|23463775|gb|AAN33620.1| Bme2 protein [Brucella suis 1330]
Length = 205
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 69/150 (46%), Gaps = 24/150 (16%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
I P R + +L+K + I++ GD + ++ + ++ GV
Sbjct: 37 IVPGGDGAPRAAQAAQLWKDGRS-----PYILATGD------GDCLLNKHIMMAKGVPPS 85
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ------HFGINTK 200
I +E +S T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+ HF ++
Sbjct: 86 AILVECRSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTACPQMHF-TSSP 144
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ +D + P + E +KEY
Sbjct: 145 VADADMPGGFPGTPP------VIEHVVKEY 168
>gi|325197310|gb|ADY92766.1| conserved hypothetical protein [Neisseria meningitidis G2136]
Length = 218
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + I+ +GG +K + E+ V L+ GV
Sbjct: 66 RPSPVFRE--RINHAIALYQSRRVGK----IVFTGGRTKKGYMTEAEVGRRYALKQGVPA 119
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+I E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 120 RNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSAT 178
>gi|295703757|ref|YP_003596832.1| hypothetical protein BMD_1626 [Bacillus megaterium DSM 319]
gi|294801416|gb|ADF38482.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 198
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
ESG+ D I LE + T +NA+F+ ++ N ++ I+VSS YH+KR + F
Sbjct: 83 ESGIPEDSIILENHATSTTENAKFTKRLMMNYHFQSAIVVSSNYHMKRVEKNF 135
>gi|241896247|ref|ZP_04783543.1| integral membrane protein [Weissella paramesenteroides ATCC 33313]
gi|241870488|gb|EER74239.1| integral membrane protein [Weissella paramesenteroides ATCC 33313]
Length = 359
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 25/182 (13%)
Query: 57 LLSPQWKKDGNIIVLLG--NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
L P++ +D I++ G NG + P + A RI+ + ++ FE Y
Sbjct: 169 LYRPKYNQDYIIVLGAGLLNGKDVSPLL-ASRIQIALDFANKQFEKTGYYP--------- 218
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQ 172
+I SGG L E + + G + + +E QS T++N FS ++ +++
Sbjct: 219 WLIFSGGQGGDEKLPEGVAMAEYAKQHGAQSSHVLIEDQSKTTYENMLFSKKILQARDLN 278
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
N + +S YH R+ Y + G+ D L A ++ F++ ++EYI
Sbjct: 279 LANGLFATSDYHTFRAAGYARLVGLQI-----DGLGAK------TSRFFIPNAFIREYIA 327
Query: 233 IL 234
+L
Sbjct: 328 LL 329
>gi|325143566|gb|EGC65887.1| hypothetical protein NMBM01240013_2108 [Neisseria meningitidis
M01-240013]
gi|325205110|gb|ADZ00563.1| conserved hypothetical protein [Neisseria meningitidis M04-240196]
Length = 218
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + I+ +GG +K + E+ V L+ GV
Sbjct: 66 RPSPVFRE--RINHAIALYQSRRVGK----IVFTGGRTKKGYMTEAEVGRRYALKQGVPA 119
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+I E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 120 RNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSAT 178
>gi|300983094|ref|ZP_07176438.1| hypothetical protein HMPREF9553_02397 [Escherichia coli MS 200-1]
gi|300306998|gb|EFJ61518.1| hypothetical protein HMPREF9553_02397 [Escherichia coli MS 200-1]
Length = 181
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 24/184 (13%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
IV+LG G T P + PS S R+ E +RL++ + +I +GG +
Sbjct: 4 IVVLGGGYTWNP-----QWAPSSNLINNSLPRLNEGIRLWR----ENPGSKLIFTGGVAK 54
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAY 183
+ ++ + V GV R+ I +LD ++ + ++ +K G +LV+SA
Sbjct: 55 TNTVSTAEVGARVAQSLGVPREQII----TLDLPKDTEEEAAAVKQAIGDAPFLLVTSAS 110
Query: 184 HLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAY 237
HL R+ ++FQ G+N + ++ LN + IP ++ E +G + +
Sbjct: 111 HLPRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQW 170
Query: 238 YRGN 241
+G+
Sbjct: 171 LKGS 174
>gi|59802238|ref|YP_208950.1| hypothetical protein NGO1925 [Neisseria gonorrhoeae FA 1090]
gi|161869022|ref|YP_001598188.1| periplasmic protein [Neisseria meningitidis 053442]
gi|194099817|ref|YP_002002952.1| Periplasmic protein [Neisseria gonorrhoeae NCCP11945]
gi|239999990|ref|ZP_04719914.1| Periplasmic protein [Neisseria gonorrhoeae 35/02]
gi|240013062|ref|ZP_04719975.1| Periplasmic protein [Neisseria gonorrhoeae DGI18]
gi|240017631|ref|ZP_04724171.1| Periplasmic protein [Neisseria gonorrhoeae FA6140]
gi|240081888|ref|ZP_04726431.1| Periplasmic protein [Neisseria gonorrhoeae FA19]
gi|240114167|ref|ZP_04728657.1| Periplasmic protein [Neisseria gonorrhoeae MS11]
gi|240116805|ref|ZP_04730867.1| Periplasmic protein [Neisseria gonorrhoeae PID18]
gi|240119033|ref|ZP_04733095.1| Periplasmic protein [Neisseria gonorrhoeae PID1]
gi|240122252|ref|ZP_04735214.1| Periplasmic protein [Neisseria gonorrhoeae PID24-1]
gi|240122429|ref|ZP_04735385.1| Periplasmic protein [Neisseria gonorrhoeae PID332]
gi|240126722|ref|ZP_04739608.1| Periplasmic protein [Neisseria gonorrhoeae SK-92-679]
gi|240127142|ref|ZP_04739803.1| Periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
gi|254493442|ref|ZP_05106613.1| periplasmic protein [Neisseria gonorrhoeae 1291]
gi|260441598|ref|ZP_05795414.1| Periplasmic protein [Neisseria gonorrhoeae DGI2]
gi|268595796|ref|ZP_06129963.1| periplasmic protein [Neisseria gonorrhoeae 35/02]
gi|268597985|ref|ZP_06132152.1| periplasmic protein [Neisseria gonorrhoeae FA19]
gi|268600240|ref|ZP_06134407.1| periplasmic protein [Neisseria gonorrhoeae MS11]
gi|268602480|ref|ZP_06136647.1| periplasmic protein [Neisseria gonorrhoeae PID18]
gi|268604748|ref|ZP_06138915.1| periplasmic protein [Neisseria gonorrhoeae PID1]
gi|268681017|ref|ZP_06147879.1| periplasmic protein [Neisseria gonorrhoeae PID332]
gi|268685301|ref|ZP_06152163.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
gi|268685499|ref|ZP_06152361.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
gi|291044968|ref|ZP_06570677.1| periplasmic protein [Neisseria gonorrhoeae DGI2]
gi|293398039|ref|ZP_06642245.1| periplasmic protein [Neisseria gonorrhoeae F62]
gi|296313265|ref|ZP_06863206.1| putative periplasmic protein [Neisseria polysaccharea ATCC 43768]
gi|59719133|gb|AAW90538.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|161594575|gb|ABX72235.1| periplasmic protein [Neisseria meningitidis 053442]
gi|193935107|gb|ACF30931.1| Periplasmic protein [Neisseria gonorrhoeae NCCP11945]
gi|226512482|gb|EEH61827.1| periplasmic protein [Neisseria gonorrhoeae 1291]
gi|268549185|gb|EEZ44603.1| periplasmic protein [Neisseria gonorrhoeae 35/02]
gi|268551773|gb|EEZ46792.1| periplasmic protein [Neisseria gonorrhoeae FA19]
gi|268584371|gb|EEZ49047.1| periplasmic protein [Neisseria gonorrhoeae MS11]
gi|268586611|gb|EEZ51287.1| periplasmic protein [Neisseria gonorrhoeae PID18]
gi|268588879|gb|EEZ53555.1| periplasmic protein [Neisseria gonorrhoeae PID1]
gi|268621301|gb|EEZ53701.1| periplasmic protein [Neisseria gonorrhoeae PID332]
gi|268625585|gb|EEZ57985.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
gi|268625783|gb|EEZ58183.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
gi|291011862|gb|EFE03858.1| periplasmic protein [Neisseria gonorrhoeae DGI2]
gi|291611985|gb|EFF41054.1| periplasmic protein [Neisseria gonorrhoeae F62]
gi|296840237|gb|EFH24175.1| putative periplasmic protein [Neisseria polysaccharea ATCC 43768]
gi|317165286|gb|ADV08827.1| hypothetical protein NGTW08_1872 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 218
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + I+ +GG +K + E+ V L+ GV
Sbjct: 66 RPSPVFRE--RINHAIALYQSRRVGK----IVFTGGRTKKGYMTEAEVGRRYALKQGVPA 119
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+I E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 120 RNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSAT 178
>gi|225869237|ref|YP_002745185.1| membrane protein [Streptococcus equi subsp. zooepidemicus]
gi|225702513|emb|CAX00445.1| putative membrane protein [Streptococcus equi subsp. zooepidemicus]
Length = 327
Score = 43.5 bits (101), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 20/128 (15%)
Query: 63 KKDGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K + I++LG NG + P + + RI Q Y + + +I+S
Sbjct: 150 KTKEDYIIVLGSGLNGDQVTPLLAS-RINKGIQVYRK--------------NPGSKLIMS 194
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG +AE ++ G++ +DI +E QS +T +N FS +I G + LV
Sbjct: 195 GGKGADELIAEGEAMCRYAVQQGIKSEDILVENQSRNTRENILFSKQLIP--AGASFCLV 252
Query: 180 SSAYHLKR 187
++ YHL R
Sbjct: 253 TNRYHLFR 260
>gi|315283550|ref|ZP_07871714.1| putative cytoplasmic protein [Listeria marthii FSL S4-120]
gi|313612811|gb|EFR86789.1| putative cytoplasmic protein [Listeria marthii FSL S4-120]
Length = 183
Score = 43.5 bits (101), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
GN T++ + +P+ S S + E + + + +I+SGG + +E+
Sbjct: 30 GNADTVLVLGARVNGDPAEPS-SVLKERLDTAVAYLNENPTLKVIVSGGQGEDESASEAS 88
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V L+ G+ R+ I +E +S T +N ++S K GK +I V+S YH+ R+ +
Sbjct: 89 VMEEYLVNQGIARNRINVEDKSTRTEENLKYSKG--KFNLGKTVI-VTSDYHMYRALMLA 145
Query: 193 QHFGINT 199
+ G++
Sbjct: 146 KRQGVDA 152
>gi|325922970|ref|ZP_08184680.1| hypothetical protein XGA_3712 [Xanthomonas gardneri ATCC 19865]
gi|325546551|gb|EGD17695.1| hypothetical protein XGA_3712 [Xanthomonas gardneri ATCC 19865]
Length = 205
Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 12/138 (8%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++I++LG R P F+ RI + LY ++ +GG
Sbjct: 49 DVIIVLGAAAY------DARPSPVFEE--RIRHALDLYA----QGYAPRLLFTGGFGNGA 96
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
AES V L G+ + I +ET+S T QN Q + ++++ I+VS H+
Sbjct: 97 RFAESQVARRYALRHGIPPEAIVIETESRTTRQNLQQARALMERHGMHRAIIVSDPLHMA 156
Query: 187 RSQLYFQHFGINTKASCS 204
R+ Q G++ AS +
Sbjct: 157 RALRLSQELGVDALASST 174
>gi|256763425|ref|ZP_05504005.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|257417033|ref|ZP_05594027.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
gi|256684676|gb|EEU24371.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|257158861|gb|EEU88821.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
gi|295113736|emb|CBL32373.1| Uncharacterized conserved protein [Enterococcus sp. 7L76]
gi|315145741|gb|EFT89757.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
Length = 193
Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
K+H +I+SGG E+ V LL GV I LE ++ T +N S +
Sbjct: 74 KKHP-ETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL 132
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ K +++V+S +H+ RSQL + GI+
Sbjct: 133 ---LSFKRLVIVTSDFHMYRSQLLAKRAGIS 160
>gi|228996828|ref|ZP_04156462.1| hypothetical protein bmyco0003_14130 [Bacillus mycoides Rock3-17]
gi|229004505|ref|ZP_04162244.1| hypothetical protein bmyco0002_14590 [Bacillus mycoides Rock1-4]
gi|228756696|gb|EEM06002.1| hypothetical protein bmyco0002_14590 [Bacillus mycoides Rock1-4]
gi|228762889|gb|EEM11802.1| hypothetical protein bmyco0003_14130 [Bacillus mycoides Rock3-17]
Length = 193
Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
EPS+ RI + K+ +Q +I+SGG + ++E+ L++ +
Sbjct: 55 EPSYSLQYRIDKAAEYLKTHEQ----TIVIVSGGKGKGEDISEARAMKKGLMKQSIAEQR 110
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
I +E +S +T +N +FS S+I + K +I V++ +H+ R++ + G+
Sbjct: 111 IIMEDRSTNTDENIEFSKSLIPANKKKGMI-VTNDFHMFRAKKIAEKQGL 159
>gi|290893680|ref|ZP_06556661.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|290556753|gb|EFD90286.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
Length = 189
Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+++SGG + +E+ V L+ G+ R IK+E +S T +N ++S K GK
Sbjct: 78 VVVSGGQGEDESASEASVMEEYLVNKGITRSRIKIENKSRRTEENIKYSKE--KFNLGKT 135
Query: 176 IILVSSAYHLKRSQLYFQHFGINT 199
+I V+S YH+ R+ + + G++
Sbjct: 136 VI-VTSDYHMYRALMLAKRQGLDA 158
>gi|229043469|ref|ZP_04191179.1| hypothetical protein bcere0027_15170 [Bacillus cereus AH676]
gi|228725847|gb|EEL77094.1| hypothetical protein bcere0027_15170 [Bacillus cereus AH676]
Length = 196
Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG NGT +PS+ RI + KS + I+SGG
Sbjct: 43 EADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHDK----AIAIVSGG 87
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 88 KGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 146
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 147 DFHMFRAK 154
>gi|54302701|ref|YP_132694.1| hypothetical protein PBPRB1022 [Photobacterium profundum SS9]
gi|46916125|emb|CAG22894.1| hypothetical protein PBPRB1022 [Photobacterium profundum SS9]
Length = 358
Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 21/111 (18%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II++GG K G ES L+E G+ D I E ++ +T NA+ S +++ +
Sbjct: 219 IIVTGG-LAKAGRTESSAMKAWLVEQGISEDRIIEENKATNTIDNARLSLALLAKYNIQT 277
Query: 176 IILVSSAYHLKRSQLYFQ--------------------HFGINTKASCSDY 206
LVS++ H+ RS + F H +N + S SD+
Sbjct: 278 ATLVSASIHVHRSHILFDILHWQNRLHNNKITPSINFNHVAVNDELSTSDF 328
>gi|227329837|ref|ZP_03833861.1| hypothetical protein PcarcW_21865 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 282
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 16/235 (6%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K ++ +++L + + LL L+ Y +PQ K I+VL
Sbjct: 31 WFTQRQRTGKTIMLASWLMLI-LLSLQPVADRLLLPLESHYPTWRQTPQASKAEYIVVLG 89
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G T P+ + S R+ E +RLY + + +I +GG Q + ++ +
Sbjct: 90 GGYTYNAEWAPSSNL--ISNSLPRVTEGVRLYHA----NPGAKLIFTGGAAQGNPVSSAK 143
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
G+ + DI + DT + A ++ ++ + +LV+SA HL R+ +F
Sbjct: 144 TAALVAESLGIPQQDIVILDTPRDTEEEAAATAKIVGE---RPFLLVTSANHLPRAMRFF 200
Query: 193 QHFGI------NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
Q G+ + + + LN + + P + +E A E +G L +G
Sbjct: 201 QAQGLAPIPAPANQMAITSALNPWEKVFPSAYYLSHSERAWYETLGRLWQALKGT 255
>gi|303235087|ref|ZP_07321710.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
gi|302493791|gb|EFL53574.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
Length = 308
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 65/141 (46%), Gaps = 22/141 (15%)
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
R+ S ++ + +I+I G + ES+ N +E+ ++ DI LE +++T QN
Sbjct: 161 RMLTSFAYYTTNKSIMIFSGGKSNGDIEESVAMKNFAIENHIQDTDILLEKLAMNTMQNI 220
Query: 162 QFSSSMIK----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
++ +I+ + K I ++++ +H R++L +N +++IP
Sbjct: 221 EYVKKLIQQQDTDFVDKKICVITNNFHAFRTKLICNKMKVN------------WTVIPTQ 268
Query: 218 ANF------YLTELALKEYIG 232
+NF YL EL Y+
Sbjct: 269 SNFNSKISTYLIELLAAIYLD 289
>gi|225628868|ref|ZP_03786902.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254706062|ref|ZP_05167890.1| hypothetical protein BpinM_03433 [Brucella pinnipedialis
M163/99/10]
gi|254712252|ref|ZP_05174063.1| hypothetical protein BcetM6_02514 [Brucella ceti M644/93/1]
gi|254715323|ref|ZP_05177134.1| hypothetical protein BcetM_02529 [Brucella ceti M13/05/1]
gi|256029727|ref|ZP_05443341.1| hypothetical protein BpinM2_03558 [Brucella pinnipedialis
M292/94/1]
gi|256157879|ref|ZP_05455797.1| hypothetical protein BcetM4_03368 [Brucella ceti M490/95/1]
gi|256253159|ref|ZP_05458695.1| hypothetical protein BcetB_02424 [Brucella ceti B1/94]
gi|260167184|ref|ZP_05753995.1| Bme2 protein [Brucella sp. F5/99]
gi|261217053|ref|ZP_05931334.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261220265|ref|ZP_05934546.1| Bme2 [Brucella ceti B1/94]
gi|261313499|ref|ZP_05952696.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261319923|ref|ZP_05959120.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261756588|ref|ZP_06000297.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265986738|ref|ZP_06099295.1| Bme2 [Brucella pinnipedialis M292/94/1]
gi|265996388|ref|ZP_06108945.1| Bme2 [Brucella ceti M490/95/1]
gi|225616714|gb|EEH13762.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|260918849|gb|EEX85502.1| Bme2 [Brucella ceti B1/94]
gi|260922142|gb|EEX88710.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292613|gb|EEX96109.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261302525|gb|EEY06022.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261736572|gb|EEY24568.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|262550685|gb|EEZ06846.1| Bme2 [Brucella ceti M490/95/1]
gi|264658935|gb|EEZ29196.1| Bme2 [Brucella pinnipedialis M292/94/1]
Length = 205
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
I P R + +L+K + I++ GD + ++ + ++ GV
Sbjct: 37 IVPGGDGAPRAAQAAQLWKDGRS-----PYILATGD------GDCLLNKHIMMAKGVPPS 85
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ------HFGINTK 200
I +E +S T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+ HF +
Sbjct: 86 AILVECRSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTACPQMHFTSSPM 145
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEY 230
A +D + P + E +KEY
Sbjct: 146 AD-ADMPGGFPGTPP------VIEHVVKEY 168
>gi|117923765|ref|YP_864382.1| hypothetical protein Mmc1_0451 [Magnetococcus sp. MC-1]
gi|117607521|gb|ABK42976.1| protein of unknown function DUF218 [Magnetococcus sp. MC-1]
Length = 230
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 106/243 (43%), Gaps = 21/243 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLL+ FL + W L + + ++ ++ ++ +I + K + QR P
Sbjct: 1 MLLA--FLCMRRWPKLARFTLVLAMLALYLQSAPWVSEAMIQYLESKTQALNPQRAAADP 58
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS--YSRIFETMRLYKSCKQHSMHCTIII 118
+ V+LG G P P + + +R+ LY++ + I++
Sbjct: 59 -----AQLTVVLGCGR--YPEAPEYGGVDTLSTCGLARVRYGAYLYRATGR-----PILV 106
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+GG P +E+ ++LE + E S +T++NA+ S++++K +I L
Sbjct: 107 AGGAPYGEQRSEADAMA-EVLEREFRIPVMFREGGSRNTWENAKNSAAILKREGLTHIFL 165
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYL--NAYYSIIPLSANFYLTELALKEYIGILIA 236
V+ A + R+ F+ GI + + + + + + L NFY AL E +GIL
Sbjct: 166 VTHAKDMSRAAWAFREQGIQVTEAPTLFKTKSPAWPLPYLPDNFYEFRWALHELVGIL-- 223
Query: 237 YYR 239
YYR
Sbjct: 224 YYR 226
>gi|294627587|ref|ZP_06706170.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294667213|ref|ZP_06732434.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292598218|gb|EFF42372.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292602994|gb|EFF46424.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 183
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 12/139 (8%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
++I++LG R P F+ RI + LY ++ +GG
Sbjct: 26 ADVIIVLGAAAY------DARPSPVFEE--RIRHALDLYA----QGYAPRLLFTGGFGNG 73
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
AES V L G+ D I +ET S T QN + + ++++ I+VS H+
Sbjct: 74 ARFAESQVARRYALRHGIPPDAIVIETTSRTTRQNLEQARTLMERHGLHRAIIVSDPLHM 133
Query: 186 KRSQLYFQHFGINTKASCS 204
R+ Q GI+ AS +
Sbjct: 134 ARALRLSQELGIDALASST 152
>gi|256059361|ref|ZP_05449563.1| hypothetical protein Bneo5_03263 [Brucella neotomae 5K33]
gi|261323321|ref|ZP_05962518.1| Bme2 [Brucella neotomae 5K33]
gi|261299301|gb|EEY02798.1| Bme2 [Brucella neotomae 5K33]
Length = 205
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 70/151 (46%), Gaps = 26/151 (17%)
Query: 87 IEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
I P R + +L+K C + I++ GD + ++ + ++ GV
Sbjct: 37 IVPGGDGAPRAAQAAQLWKDGCSPY------ILATGD------GDCLLNKHIMMAKGVPP 84
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ------HFGINT 199
I +E +S T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+ HF ++
Sbjct: 85 SAILVECRSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTACPQMHF-TSS 143
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ +D + P + E +KEY
Sbjct: 144 PVADADMPGGFPGTPP------VIEHVVKEY 168
>gi|116629737|ref|YP_814909.1| hypothetical protein LGAS_1098 [Lactobacillus gasseri ATCC 33323]
gi|238853386|ref|ZP_04643765.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
gi|282851809|ref|ZP_06261172.1| putative membrane protein [Lactobacillus gasseri 224-1]
gi|311110620|ref|ZP_07712017.1| putative membrane protein [Lactobacillus gasseri MV-22]
gi|116095319|gb|ABJ60471.1| hypothetical protein LGAS_1098 [Lactobacillus gasseri ATCC 33323]
gi|238833958|gb|EEQ26216.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
gi|282557051|gb|EFB62650.1| putative membrane protein [Lactobacillus gasseri 224-1]
gi|311065774|gb|EFQ46114.1| putative membrane protein [Lactobacillus gasseri MV-22]
Length = 342
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 20/138 (14%)
Query: 64 KDGNIIVLLGNG---TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K N IV+LG G + P + A RI + Y +++ II+SG
Sbjct: 172 KKLNYIVVLGAGLIGKKVTPLLAA-RINRGIEVY--------------RNNPGSKIIMSG 216
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + E++ E G+ DI +E +S T QN FS ++K+ +V+
Sbjct: 217 GQGPGEEIPEAVAMAKYAEEKGISNQDIIVEDKSKTTRQNLAFSHKLMKS--NSRFAIVT 274
Query: 181 SAYHLKRSQLYFQHFGIN 198
++YH+ R+ + + G++
Sbjct: 275 NSYHVYRALVLAKRMGLD 292
>gi|15675952|ref|NP_273070.1| EpiH/GdmH-related protein [Neisseria meningitidis MC58]
gi|7225229|gb|AAF40483.1| EpiH/GdmH-related protein [Neisseria meningitidis MC58]
gi|316984529|gb|EFV63495.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
gi|325129274|gb|EGC52113.1| hypothetical protein NMBOX9930304_1979 [Neisseria meningitidis
OX99.30304]
gi|325139474|gb|EGC62014.1| periplasmic protein [Neisseria meningitidis CU385]
gi|325199239|gb|ADY94694.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
Length = 214
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + I+ +GG +K + E+ V L+ GV
Sbjct: 66 RPSPVFRE--RINHAIALYQSRRVGK----IVFTGGRTKKGYMTEAEVGRRYALKQGVPA 119
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+I E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 120 RNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSAT 178
>gi|256616694|ref|ZP_05473540.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256596221|gb|EEU15397.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|315033112|gb|EFT45044.1| conserved hypothetical protein [Enterococcus faecalis TX0017]
Length = 193
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
K+H +I+SGG E+ V LL GV I LE ++ T +N S +
Sbjct: 74 KKHP-ETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL 132
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ K +++V+S +H+ RSQL + GI+
Sbjct: 133 ---LSFKRLVIVTSDFHMYRSQLLAKRAGIS 160
>gi|255068057|ref|ZP_05319912.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
gi|255047655|gb|EET43119.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
Length = 214
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + I+ +GG P+K + E+ V L+ G+
Sbjct: 65 RPSPIFRE--RINHAITLYQSHRVEK----IVFTGGTPKKGYMTEAEVGRRYALKQGIPA 118
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+I E S +T++N + +++ +II+VS YHL R+
Sbjct: 119 HNILFENTSRNTYENIRNIRPILRAEGIGSIIIVSDPYHLARA 161
>gi|229109172|ref|ZP_04238771.1| hypothetical protein bcere0018_14430 [Bacillus cereus Rock1-15]
gi|228674182|gb|EEL29427.1| hypothetical protein bcere0018_14430 [Bacillus cereus Rock1-15]
Length = 196
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG NGT +PS+ RI + KS + I+SGG
Sbjct: 43 EADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHDK----AIAIVSGG 87
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 88 KGKGEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 146
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 147 DFHMFRAK 154
>gi|164688115|ref|ZP_02212143.1| hypothetical protein CLOBAR_01760 [Clostridium bartlettii DSM
16795]
gi|164602528|gb|EDQ95993.1| hypothetical protein CLOBAR_01760 [Clostridium bartlettii DSM
16795]
Length = 249
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI-----KN 170
II+SGG + ++E+ + LL G++ +I +E +S T +N FS +I K
Sbjct: 129 IIVSGGQGRGENISEASAMKSYLLSKGIDEKNIIMEDKSRTTKENFCFSKKIIEGDSHKK 188
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFG 196
++ NI ++++ +H RS++ + G
Sbjct: 189 IENLNIKVITTDFHTLRSKIISKRVG 214
>gi|21241154|ref|NP_640736.1| hypothetical protein XAC0380 [Xanthomonas axonopodis pv. citri str.
306]
gi|21106459|gb|AAM35272.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 201
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 12/139 (8%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
++I++LG R P F+ RI + LY ++ +GG
Sbjct: 44 ADVIIVLGAAAY------DARPSPVFEE--RIRHALDLYA----QGYAPRLLFTGGFGNG 91
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
AES V L G+ D I +ET S T QN + + ++++ I+VS H+
Sbjct: 92 ARFAESQVARRYALRHGIPPDAIVIETTSRTTRQNLEQARTLMERHGLHRAIIVSDPLHM 151
Query: 186 KRSQLYFQHFGINTKASCS 204
R+ Q GI+ AS +
Sbjct: 152 ARALRLSQELGIDALASST 170
>gi|160874624|ref|YP_001553940.1| hypothetical protein Sbal195_1507 [Shewanella baltica OS195]
gi|160860146|gb|ABX48680.1| protein of unknown function DUF218 [Shewanella baltica OS195]
Length = 248
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 102 RLYKSCKQHSM--HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL + +Q ++ C +I+SG + + + + +E GV++ I + DT +
Sbjct: 108 RLSEGVRQLNLGQECKLIVSGWGGELTQFSHAEMMAKAAVELGVDKRRIIQFPLARDTIE 167
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA- 218
AQ+ + + + LV+SA H+ R+ F G++ +A+ +D++ L+A
Sbjct: 168 EAQY---LQWELGEEPFRLVTSATHMPRAMAIFTAKGLHPEAAPTDFIGRDDFWWRLTAD 224
Query: 219 NFYLTELALKEYIGIL 234
N ++ A+ EYIG L
Sbjct: 225 NLVASQRAIHEYIGRL 240
>gi|325135386|gb|EGC58007.1| periplasmic protein [Neisseria meningitidis M0579]
gi|325201201|gb|ADY96655.1| conserved hypothetical protein [Neisseria meningitidis M01-240149]
gi|325207058|gb|ADZ02510.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
Length = 214
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + I+ +GG +K + E+ V L+ GV
Sbjct: 66 RPSPVFRE--RINHAIALYQSRRVGK----IVFTGGRTKKGYMTEAEVGRRYALKQGVPA 119
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+I E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 120 RNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSAT 178
>gi|306840763|ref|ZP_07473510.1| Bme2 protein [Brucella sp. BO2]
gi|306289158|gb|EFM60407.1| Bme2 protein [Brucella sp. BO2]
Length = 189
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
I P R + +L+K + I++ GD + ++ + ++ GV
Sbjct: 21 IVPGGDGAPRAAQAAQLWKDGRS-----PYILATGD------GDCLLNKHIMMAKGVPPS 69
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ------HFGINTK 200
I +E +S T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+ HF +
Sbjct: 70 AILVECRSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTACPQMHFASSPV 129
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEY 230
A +D + P + E +KEY
Sbjct: 130 AD-ADMPGGFPGTPP------VIEHVVKEY 152
>gi|83311553|ref|YP_421817.1| hypothetical protein amb2454 [Magnetospirillum magneticum AMB-1]
gi|82946394|dbj|BAE51258.1| Uncharacterized conserved protein [Magnetospirillum magneticum
AMB-1]
Length = 266
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 22/193 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
RKI ++ L+F+ + + L L+ +Q P P K DG II+ G I P
Sbjct: 39 RKILSITLLTLVFTSVF--PVEKWALAWLEDRFQTPDPLPD-KVDGIIIL----GGAISP 91
Query: 81 TIPAIRIEPSFQS-YSRIFETMRLYKSCKQHSMHCTIIISGGD----PQKHGLAE--SIV 133
A R + S S +R+ E + L + + ++ +GG Q+H A+ +
Sbjct: 92 EQSAARGQVSVGSAVTRMTEMIPLARRYPE----ARVVFTGGSGNAFDQEHREADYAEMF 147
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y + E+G + E S +T +NA S +++ G+ +L++SA+H+ R+ F+
Sbjct: 148 YRDIGFETG----RMVFERDSRNTRENATLSKELMQPKPGETWLLITSAWHMPRAVGCFR 203
Query: 194 HFGINTKASCSDY 206
G DY
Sbjct: 204 AVGWPVVPIPVDY 216
>gi|254671270|emb|CBA08572.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
Length = 218
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + II +GG +K + E+ V L+ G+
Sbjct: 66 RPSPVFRE--RINHAIALYQSRRVGK----IIFTGGRSKKGYMTEAEVGRRYALKQGIPP 119
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+I E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 120 RNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSAT 178
>gi|261401556|ref|ZP_05987681.1| putative periplasmic protein [Neisseria lactamica ATCC 23970]
gi|269208394|gb|EEZ74849.1| putative periplasmic protein [Neisseria lactamica ATCC 23970]
Length = 218
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + II +GG +K + E+ V L+ G+
Sbjct: 66 RPSPVFRE--RINHAIALYQSRRVGK----IIFTGGRSKKGYMTEAEVGRRYALKQGIPP 119
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+I E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 120 RNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSAT 178
>gi|169823893|ref|YP_001691504.1| hypothetical protein FMG_0196 [Finegoldia magna ATCC 29328]
gi|167830698|dbj|BAG07614.1| putative membrane protein [Finegoldia magna ATCC 29328]
Length = 308
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 65/141 (46%), Gaps = 22/141 (15%)
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
R+ S ++ + +I+I G + ES+ N +E+ ++ DI LE +++T QN
Sbjct: 161 RMLTSFAYYTTNKSIMIFSGGKSNGDIEESVAMKNFAIENHIQDTDILLEKLAMNTMQNI 220
Query: 162 QFSSSMIK----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
++ +I+ + K I ++++ +H R++L +N +++IP
Sbjct: 221 EYVKKLIQQQDTDFVDKKICVITNNFHAFRTKLICNKMKVN------------WTVIPTQ 268
Query: 218 ANF------YLTELALKEYIG 232
+NF YL EL Y+
Sbjct: 269 SNFNSKISTYLIELLAAIYLD 289
>gi|50121475|ref|YP_050642.1| hypothetical protein ECA2551 [Pectobacterium atrosepticum SCRI1043]
gi|49612001|emb|CAG75450.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
Length = 282
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 27/197 (13%)
Query: 60 PQWKK-----DGNIIVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIFETMRLYKSCKQH 110
P W++ + IV+LG G T PS S R+ E +RLY +
Sbjct: 71 PTWQQTSQASKADYIVVLGGGYTY-----NAEWAPSSNLISNSLPRVTEGIRLYHA---- 121
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ +I +GG Q + ++ + G+ R DI + DT + A ++ ++ +
Sbjct: 122 NPGAKLIFTGGAAQGNPVSSAKTAALVAESLGIPRQDIVILDTPRDTEEEAAATAKIVGD 181
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGI------NTKASCSDYLNAYYSIIPLSANFYLTE 224
+ +LV+SA HL R+ +FQ G+ + + + LN + + P + +E
Sbjct: 182 ---RPFLLVTSANHLPRAIRFFQAQGLAPIPAPANQMAITSALNPWEKVFPSAYYLSHSE 238
Query: 225 LALKEYIGILIAYYRGN 241
A E +G L +G
Sbjct: 239 RAWYETLGRLWQLLKGT 255
>gi|325143399|gb|EGC65728.1| hypothetical protein NMB9615945_0016 [Neisseria meningitidis
961-5945]
Length = 218
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + II +GG +K + E+ V L+ G+
Sbjct: 66 RPSPVFRE--RINHAIALYQSRRVGK----IIFTGGRSKKGYMTEAEVGRRYALKQGIPP 119
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+I E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 120 RNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSAT 178
>gi|293392078|ref|ZP_06636412.1| molybdate ABC transporter permease protein [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290952612|gb|EFE02731.1| molybdate ABC transporter permease protein [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 247
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IVLLG G + A S + E +R Y + Q ++ISG P
Sbjct: 76 KQAQAIVLLGGGVRDSKELYA-----PLASSATQLERLR-YAAYLQKETQLPLLISGVSP 129
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
G +E+ V +LL+ LE +SL T +NA ++ +++ IILV++ +
Sbjct: 130 T--GASEAKVSAQELLDF-FHVPTKWLEEKSLTTKENALYTRQLLEKEGINKIILVTNEW 186
Query: 184 HLKRSQLYFQHFGINT-KASCSDYLN-AYYSI-----IPLSANFYLTELALKEYIGIL 234
H++R++L F+ G AS + + YS+ IP + LKE++G L
Sbjct: 187 HMQRAKLLFEGQGFQVLPASVGEGITPEAYSLNMMHFIPQAGAIAKNMQLLKEWMGYL 244
>gi|148380781|ref|YP_001255322.1| hypothetical protein CBO2822 [Clostridium botulinum A str. ATCC
3502]
gi|153934201|ref|YP_001385066.1| hypothetical protein CLB_2765 [Clostridium botulinum A str. ATCC
19397]
gi|153935183|ref|YP_001388535.1| hypothetical protein CLC_2698 [Clostridium botulinum A str. Hall]
gi|148290265|emb|CAL84385.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502]
gi|152930245|gb|ABS35745.1| putative membrane protein [Clostridium botulinum A str. ATCC 19397]
gi|152931097|gb|ABS36596.1| putative membrane protein [Clostridium botulinum A str. Hall]
Length = 351
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P+ KK IIVL G+G + R+ P S RI + + +YK + II +
Sbjct: 159 PKRKKYDYIIVL-GSG------LIGDRVPPLLAS--RIDKGIEIYKKQLKKGNPSKIIFT 209
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-----MQGK 174
G ++E + + G+ D + +E ++++T++N S +++ +
Sbjct: 210 GAKGADEKISEGLAMWKYAKDKGIPTDHMIIEDKAVNTYENLYNSRKLLEEDYKTREKEY 269
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I+V++ +HL RS ++ + G+ + S Y+S+ L ++EYIG++
Sbjct: 270 RCIVVTNNFHLFRSLIWARIVGLECDGAGSK-TKLYFSLNAL----------IREYIGVM 318
Query: 235 IAYYRGN 241
Y + N
Sbjct: 319 YIYKKIN 325
>gi|328950417|ref|YP_004367752.1| protein of unknown function DUF218 [Marinithermus hydrothermalis
DSM 14884]
gi|328450741|gb|AEB11642.1| protein of unknown function DUF218 [Marinithermus hydrothermalis
DSM 14884]
Length = 190
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS +R+ + LY+ TI+++GG +E V L +GV RD +
Sbjct: 38 PSPIFANRLNAALALYR----QGYAPTILVTGGKQPGDRYSEGEVGCRYLEAAGVPRDAL 93
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
ET+S T++N + + +++ + +++V+ A HL R+ + Q I+
Sbjct: 94 ICETRSRSTWENLKNARALLGPAR---VLIVTDAPHLPRAMMLAQRLNIDA 141
>gi|261868380|ref|YP_003256302.1| molybdate ABC transporter permease [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413712|gb|ACX83083.1| molybdate ABC transporter permease protein [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 247
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IVLLG G + + S + E +R Y + Q ++ISG P
Sbjct: 76 KQAQAIVLLGGGVR-----DSKELYAPLASSATQLERLR-YAAYLQKETQLPLLISGVSP 129
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
G +E+ V +LL+ LE +SL T +NA ++ +++ IILV++ +
Sbjct: 130 T--GASEAKVSAQELLDF-FHVPTKWLEEKSLTTKENALYTRQLLEKEGINKIILVTNEW 186
Query: 184 HLKRSQLYFQHFGINT-KASCSDYLNA-YYSI-----IPLSANFYLTELALKEYIGIL 234
H++R++L F+ G AS + + YS+ IP + LKE++G L
Sbjct: 187 HMQRAKLLFEGQGFQVLPASVGEGITPEAYSLNMMHFIPQAGAIAKNMQLLKEWMGYL 244
>gi|37525579|ref|NP_928923.1| hypothetical protein plu1635 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785007|emb|CAE13928.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 279
Score = 43.1 bits (100), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 69 IVLLGNGTTIIPT-IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T P P+ + S R+ E +RLY+ M + +GG +
Sbjct: 88 IVVLGGGFTYNPNWAPSSNL--LNNSLPRVTEGIRLYRLNPGSKM----VFTGG--KGAN 139
Query: 128 LAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ S + +S GV +D T+ +DT Q A +I N + ILV+SA H++
Sbjct: 140 VKSSAEVAAIVAQSLGVPAEDTIALTKPMDTEQEANEVEKLIGN---QPFILVTSANHMQ 196
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIP----LSANFYLT 223
R+ +FQ G+N ++ L + P L + +YL+
Sbjct: 197 RAITFFQQHGLNPIPGPANQLAITSPLHPWEKYLPSAYYLS 237
>gi|153855830|ref|ZP_01996816.1| hypothetical protein DORLON_02837 [Dorea longicatena DSM 13814]
gi|149751871|gb|EDM61802.1| hypothetical protein DORLON_02837 [Dorea longicatena DSM 13814]
Length = 255
Score = 43.1 bits (100), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
K+H +I+SGG + + E+ L G++R I E S++T +N +FS ++
Sbjct: 134 KEHP-EVHVIVSGGQGKDEEVTEAYAMARYLECEGLDRRRIVQEDVSVNTLENLKFSRNL 192
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGINT----KASCSDYLNAYYSIIPLSANFYLT 223
I ++ + +VS+ +H+ R +Y + G ASC L Y + F +
Sbjct: 193 IADVD-TPVGIVSNNFHVYRGCVYAKRAGFKEPFPIPASCHPLLFPNYFV---RECFAVW 248
Query: 224 ELALKEY 230
+L LK+Y
Sbjct: 249 KLWLKKY 255
>gi|89072860|ref|ZP_01159417.1| hypothetical protein SKA34_05135 [Photobacterium sp. SKA34]
gi|89051382|gb|EAR56837.1| hypothetical protein SKA34_05135 [Photobacterium sp. SKA34]
Length = 365
Score = 43.1 bits (100), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P + + E + + + + I+++GG P H E + + L+E G+ ++
Sbjct: 202 LNPDGSMHPILVERLETTLAMAKANPDALIVLTGGVPMNHK-TEGKLMADWLIEKGINKN 260
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
I E + T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 261 RIIEENYATSTVDNALFSSYALARHHIKHATIISSASHVRRGQTLFE 307
>gi|17989186|ref|NP_541819.1| hypothetical protein BMEII0841 [Brucella melitensis bv. 1 str. 16M]
gi|17985041|gb|AAL54083.1| hypothetical protein BMEII0841 [Brucella melitensis bv. 1 str. 16M]
Length = 180
Score = 43.1 bits (100), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 69/150 (46%), Gaps = 24/150 (16%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
I P R + +L+K + I++ GD + ++ + ++ GV
Sbjct: 12 IVPGGDGAPRAAQAAQLWKDGRS-----PYILATGD------GDCLLNKHIMMAKGVPPS 60
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ------HFGINTK 200
I +E +S T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+ HF ++
Sbjct: 61 AILVECRSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTACPQMHF-TSSP 119
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ +D + P + E +KEY
Sbjct: 120 VADADMPGGFPGTPP------VIEHVVKEY 143
>gi|309379839|emb|CBX21615.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 218
Score = 43.1 bits (100), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + II +GG +K + E+ V L+ G+
Sbjct: 66 RPSPVFRE--RINHAIALYQSRRVGK----IIFTGGRSKKGYMTEAEVGRRYALKQGIPP 119
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+I E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 120 RNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEIAEDLGVRVYMSAT 178
>gi|257465061|ref|ZP_05629432.1| hypothetical protein AM202_01030 [Actinobacillus minor 202]
gi|257450721|gb|EEV24764.1| hypothetical protein AM202_01030 [Actinobacillus minor 202]
Length = 247
Score = 43.1 bits (100), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 12/142 (8%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E MR Y + I+ +G P + AE I K + + +E+Q+ T
Sbjct: 106 LERMR-YAAYLHKETQLPILATGSAPNGNSEAEIIA---KEFKQFFDVPTKWIESQAKTT 161
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH-------FGINTKASCSDYLNAY 210
+NA ++ +++ IILV+ +H++R++L F+ G+ + S+Y+N
Sbjct: 162 KENALYTKDILEKEGINTIILVTQNWHMQRAKLLFEQQGFHVLPAGVGYGKTPSEYINFM 221
Query: 211 YSIIPLSANFYLTELALKEYIG 232
Y +P S L LKE++G
Sbjct: 222 Y-FVPQSGAMDNIMLFLKEWLG 242
>gi|226941137|ref|YP_002796211.1| transmembrane protein [Laribacter hongkongensis HLHK9]
gi|226716064|gb|ACO75202.1| Probable transmembrane protein [Laribacter hongkongensis HLHK9]
Length = 253
Score = 43.1 bits (100), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
++++GG P G E+++ L E V + E+ SL T NA+ S+ +++ +
Sbjct: 125 VLVTGGAPLG-GPPEAVLMAAALAEWQVSARWV--ESASLTTADNARLSAGLLRQAGVQR 181
Query: 176 IILVSSAYHLKRSQLYFQHFGIN 198
I LVS A+HL R+ F+ G+
Sbjct: 182 IALVSQAWHLPRAIRAFERQGLT 204
>gi|315266865|gb|ADT93718.1| protein of unknown function DUF218 [Shewanella baltica OS678]
Length = 233
Score = 43.1 bits (100), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 102 RLYKSCKQHSM--HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL + +Q ++ C +I+SG + + + + +E GV++ I + DT +
Sbjct: 93 RLSEGVRQLNLGQECKLIVSGWGGELTQFSHAEMMAKAAVELGVDKRRIIQFPLARDTIE 152
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA- 218
AQ+ + + + LV+SA H+ R+ F G++ +A+ +D++ L+A
Sbjct: 153 EAQY---LQWELGEEPFRLVTSATHMPRAMAIFTAKGLHPEAAPTDFIGRDDFWWRLTAD 209
Query: 219 NFYLTELALKEYIGIL 234
N ++ A+ EYIG L
Sbjct: 210 NLVASQRAIHEYIGRL 225
>gi|306845690|ref|ZP_07478259.1| Bme2 protein [Brucella sp. BO1]
gi|306274011|gb|EFM55838.1| Bme2 protein [Brucella sp. BO1]
Length = 205
Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
I P R + +L+K + I++ GD + ++ + ++ GV
Sbjct: 37 IVPGGDGAPRAAQAAQLWKDGRS-----PYILATGD------GDCLLNKHIMIAKGVPPS 85
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
I +E +S T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+
Sbjct: 86 AILVECRSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFR 132
>gi|229084714|ref|ZP_04216979.1| hypothetical protein bcere0022_13480 [Bacillus cereus Rock3-44]
gi|228698598|gb|EEL51318.1| hypothetical protein bcere0022_13480 [Bacillus cereus Rock3-44]
Length = 172
Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + ++LLG GT EPS+ RI + K+ +Q +I+SGG
Sbjct: 19 DADYMILLGAKVKGT-----------EPSYSLQYRIDKAAEYLKTHEQ----TIVIVSGG 63
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ L++ + I +E +S +T +N +FS ++I + K +I V++
Sbjct: 64 KGKGEDISEALAMKQGLMKQNIAEQRIIMEDRSTNTDENIEFSKALIPADKKKGMI-VTN 122
Query: 182 AYHLKRSQLYFQHFGI 197
+H+ R++ + G+
Sbjct: 123 DFHMFRAKKIAKKQGL 138
>gi|325127259|gb|EGC50197.1| hypothetical protein NMXN1568_2007 [Neisseria meningitidis N1568]
Length = 214
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + II +GG +K + E+ V L+ G+
Sbjct: 66 RPSPVFRE--RINHAIALYQSRRVGK----IIFTGGRSKKGYMTEAEVGRRYALKQGIPP 119
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+I E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 120 RNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSAT 178
>gi|251792809|ref|YP_003007535.1| molybdate ABC transporter permease [Aggregatibacter aphrophilus
NJ8700]
gi|247534202|gb|ACS97448.1| molybdate ABC transporter permease protein [Aggregatibacter
aphrophilus NJ8700]
Length = 248
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 16/178 (8%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ IVLLG G + A + Q E +R Y + Q ++ISG P
Sbjct: 77 RQAQAIVLLGGGVRDSKELYAPLASSAVQ-----LERLR-YAAYLQKETQLPLLISGVSP 130
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
G +E+ V +L + LE +SL T +NA F+ +++ IILV++ +
Sbjct: 131 --TGASEAKVSMQEL-QDFFNVPTQWLEEKSLTTKENALFTRQLLEKEGINKIILVTNEW 187
Query: 184 HLKRSQLYFQHFG-------INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
H++R++L F+ G + + ++Y IP + LKE++G L
Sbjct: 188 HMQRAKLLFEEQGFQVLPASVGEGVTPTEYKLNMMHFIPQAGAMAKNMQLLKEWLGYL 245
>gi|228907351|ref|ZP_04071209.1| hypothetical protein bthur0013_15180 [Bacillus thuringiensis IBL
200]
gi|228852212|gb|EEM97008.1| hypothetical protein bthur0013_15180 [Bacillus thuringiensis IBL
200]
Length = 194
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 82/175 (46%), Gaps = 28/175 (16%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS-YQRPLLSPQWKKDGNIIVLLG---N 74
++RK M C +++ +I + + LQ+ Y+ ++ + D + I++LG N
Sbjct: 2 NMRKKKIMKCILVVI------MICAVYMGFLQYHIYKHGHMNATY--DADYIIVLGSKVN 53
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
GT +PS+ RI + KS ++ I+SGG + ++E++
Sbjct: 54 GT-----------KPSYSLQYRIDKAAEYLKSHEK----TIAIVSGGQGKGEDISEALAM 98
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
L++ + D I +E +S T +N FS +I K +I V++ +H+ R++
Sbjct: 99 KQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTNDFHMFRAK 152
>gi|260777035|ref|ZP_05885929.1| hypothetical protein VIC_002425 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260606701|gb|EEX32975.1| hypothetical protein VIC_002425 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 365
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I+++GG P+ H E + + L+ GV +D I E + T NA FSS + K+
Sbjct: 231 IVLTGGVPKNHK-TEGKLMADWLISKGVSKDRIIEENYATSTVGNALFSSYALARHGIKH 289
Query: 176 IILVSSAYHLKRSQLYFQ 193
++SSA H++R Q F+
Sbjct: 290 ATIISSASHVRRGQTLFE 307
>gi|153838447|ref|ZP_01991114.1| transporter [Vibrio parahaemolyticus AQ3810]
gi|149748167|gb|EDM59026.1| transporter [Vibrio parahaemolyticus AQ3810]
Length = 365
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P + + E + + + + II++GG P+ H E + + L+ GV +D
Sbjct: 202 LNPDGSMHQILVERLETTLAMAKANPDAIIILTGGVPKNHK-TEGKLMADWLIGKGVSKD 260
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
I E + T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 261 RIIEENYATSTVGNALFSSYALARHYIKHATIISSASHVRRGQTLFE 307
>gi|254804041|ref|YP_003082262.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
alpha14]
gi|254667583|emb|CBA03327.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
alpha14]
Length = 218
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS RI + LY+S + I+ +GG +K + E+ V L+ GV +I
Sbjct: 67 PSPVFRERINHAIALYQSRRVGK----IVFTGGRTKKGYMTEAEVGRRYALKQGVPARNI 122
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 123 LFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSAT 178
>gi|153941422|ref|YP_001392099.1| hypothetical protein CLI_2871 [Clostridium botulinum F str.
Langeland]
gi|152937318|gb|ABS42816.1| putative membrane protein [Clostridium botulinum F str. Langeland]
gi|295320103|gb|ADG00481.1| putative membrane protein [Clostridium botulinum F str. 230613]
Length = 351
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 25/187 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P+ KK IIVL G+G + R+ P S RI + + +YK + II +
Sbjct: 159 PKRKKYDYIIVL-GSG------LIGDRVPPLLAS--RIDKGIEIYKRQLKKGNPSKIIFT 209
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK----- 174
G ++E + + G+ + + +E Q+++T++N S +++
Sbjct: 210 GAKGADEKISEGLAMWKYAKDKGIPTEHMIIEDQAVNTYENLYNSKKLLEEDHKAREKEY 269
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I+V++ +HL RS ++ + G+ + S Y+S+ L ++EYIG++
Sbjct: 270 RCIVVTNNFHLFRSLIWARIVGLECDGAGSK-TKLYFSLNAL----------IREYIGVM 318
Query: 235 IAYYRGN 241
Y + N
Sbjct: 319 YIYKKIN 325
>gi|260654419|ref|ZP_05859909.1| putative Bme2 protein [Jonquetella anthropi E3_33 E1]
gi|260631052|gb|EEX49246.1| putative Bme2 protein [Jonquetella anthropi E3_33 E1]
Length = 241
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 144 ERDDIK---LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
ER D++ +E S T +N +FS+ +++ M G LV+ +H+ R+ L+ + + + +
Sbjct: 132 ERKDLREVLIERSSRTTEENFRFSAPILRKMSGPT-ALVTDKFHMARAALWARFYAPDVQ 190
Query: 201 ------ASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL-----IAYYR 239
S + + + ++P S T +AL+E + +L IA++R
Sbjct: 191 FVFAPVPSYAPPVRLPFDLLPSSKGLDYTTMALREALALLRDRLFIAFHR 240
>gi|325203138|gb|ADY98591.1| conserved hypothetical protein [Neisseria meningitidis M01-240355]
Length = 218
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS RI + LY+S + I+ +GG +K + E+ V L+ GV +I
Sbjct: 67 PSPVFRERINHAIALYQSRRVGK----IVFTGGRTKKGYMTEAEVGRRYALKQGVPARNI 122
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 123 LFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSAT 178
>gi|313885551|ref|ZP_07819301.1| putative membrane protein [Eremococcus coleocola ACS-139-V-Col8]
gi|312619281|gb|EFR30720.1| putative membrane protein [Eremococcus coleocola ACS-139-V-Col8]
Length = 339
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKN 175
+++GG +E+ + L+E GV D I LE + +TFQN + ++ ++
Sbjct: 205 LVTGGPIAWGDTSEAAEMRDYLIERGVAGDKIILEPLAHNTFQNFYYGRELLVGPLKAAP 264
Query: 176 IILVSSAYHLKRSQLYFQHFGINTK---ASCSDYLNAYYSI 213
+I+ +S +H+ RS Y Q G+ + YL YY I
Sbjct: 265 VIVFTSRFHVLRSYCYGQASGMKATYRGTRVAWYLWPYYLI 305
>gi|189425340|ref|YP_001952517.1| hypothetical protein Glov_2281 [Geobacter lovleyi SZ]
gi|189421599|gb|ACD95997.1| protein of unknown function DUF218 [Geobacter lovleyi SZ]
Length = 198
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ E +RL++ + + + G DP + +S +Y K + D++ LE S
Sbjct: 50 GRVEEGVRLFRERRG----TWLFLVGVDPT---VRKSDLYRPKPGDPPA--DNVVLEKLS 100
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+T +NA + ++ + ++++L++S YHLKRS + F++
Sbjct: 101 RNTLENAIYGRDILAEHKVRSVLLITSRYHLKRSAILFRN 140
>gi|253990291|ref|YP_003041647.1| hypothetical protein PAU_02815 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781741|emb|CAQ84904.1| similar to inner membrane protein ycbc of escherichia coli
[Photorhabdus asymbiotica]
Length = 278
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 19/176 (10%)
Query: 67 NIIVLLGNGTTIIPT-IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ IV+LG G T P P+ + S R+ E +RLY M + G
Sbjct: 86 DYIVVLGGGFTYNPNWAPSSNL--LSNSLPRVTEGIRLYHLNPGSKM---VFTGGKGTNS 140
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYH 184
AE + L GV +D T+ +DT Q A +I GK + ILV+SA H
Sbjct: 141 KSSAEVAAMVAQSL--GVPAEDTIALTEPMDTEQEAHEVEKLI----GKHSFILVTSANH 194
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIP----LSANFYL--TELALKEYIGIL 234
++R+ +FQ G+N ++ L + P L +++YL +E A E +G +
Sbjct: 195 MQRAITFFQQQGLNPIPGPANQLAITSPLHPWEKYLPSSYYLSHSERAWYEILGTI 250
>gi|300361824|ref|ZP_07058001.1| conserved hypothetical protein [Lactobacillus gasseri JV-V03]
gi|300354443|gb|EFJ70314.1| conserved hypothetical protein [Lactobacillus gasseri JV-V03]
Length = 342
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 14/135 (10%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K N IV+LG G + ++ P + RI + +Y++ II+SGG
Sbjct: 172 KKLNYIVVLGAG------LIGKKVTPLLAA--RINREIEIYRNNPGSK----IIMSGGQG 219
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ E+ E G+ + DI +E +S T QN FS ++K +V+++Y
Sbjct: 220 PGEEIPEAAAMAKYAEEKGISKQDIIVEDKSKTTRQNLAFSHKLMK--ADSRFAIVTNSY 277
Query: 184 HLKRSQLYFQHFGIN 198
H+ R+ + + G++
Sbjct: 278 HVYRALVLAKRMGLD 292
>gi|160894200|ref|ZP_02074978.1| hypothetical protein CLOL250_01754 [Clostridium sp. L2-50]
gi|156864233|gb|EDO57664.1| hypothetical protein CLOL250_01754 [Clostridium sp. L2-50]
Length = 255
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 23/192 (11%)
Query: 39 GIIPTILLKHLQFSYQRPLL----SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
GI+ I+L + F+ + S KD ++++LG G PS
Sbjct: 73 GIVLLIVLVAVGFAAAGTICMVRASKTAPKDETVMIVLGCGVN--------GDRPSLMLT 124
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ Y H I+SGG + ++E+ L E G+ ++ + E +S
Sbjct: 125 ERLDAA---YDYLNTHE-EVVGILSGGQGKGENISEAECMYRYLTEKGIAKERLYKEERS 180
Query: 155 LDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T +N +S +++ +I+V++ +H R+ + +H GI A C A++
Sbjct: 181 TSTRENLLYSKKIMEEEHLDFRVIIVTNEFHEYRASVIAEHTGITPSAVCGK--TAWW-- 236
Query: 214 IPLSANFYLTEL 225
L +YL EL
Sbjct: 237 --LLPTYYLREL 246
>gi|224477345|ref|YP_002634951.1| hypothetical protein Sca_1860 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421952|emb|CAL28766.1| hypothetical protein SCA_1860 [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 329
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 32 LFSFIGWGIIPTI--LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
LF ++ W + T+ L+ +L +S ++ ++ K N+I++LG G R +
Sbjct: 114 LFLWLCWIAVSTLFALIHYLSWSSTYSMI--EFTKPTNLIIVLGAGLY--------REKV 163
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ R+ + LY + +Q II+SGG + ++E+ L+E + + I
Sbjct: 164 TQMLAWRLDRAVALYFAQEQP---VYIIVSGGKGEGEHVSEAEAMKAYLIEEHIPENHIL 220
Query: 150 LETQSLDTFQNAQFSSSMIKN---MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+E +S T++N + ++ + + +N+ +V+S +H+ R+ + Q I S
Sbjct: 221 MEDESHSTYENLANTKQILHDRLAFRPENMTIVTSQFHILRALRFAQILKIKASGISSRT 280
Query: 207 LNAYYS---IIPLSANFYLTELALKEYIGIL 234
A++ I A Y +L L Y G+L
Sbjct: 281 PYAFFDTALIRDFLALMYCYKLLLTIYFGLL 311
>gi|225869812|ref|YP_002745759.1| membrane protein [Streptococcus equi subsp. equi 4047]
gi|225699216|emb|CAW92492.1| putative membrane protein [Streptococcus equi subsp. equi 4047]
Length = 327
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 20/128 (15%)
Query: 63 KKDGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K + I++LG NG + P + A RI Q Y Q + +I+S
Sbjct: 150 KTKEDYIIVLGSGLNGDQVTPLL-ASRINKGIQIY--------------QKNPGSKLIMS 194
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG +AE ++ G++ +DI +E QS +T +N S +I + G + LV
Sbjct: 195 GGKGADELIAEGEAMCRYAIQQGIKSEDILVENQSRNTRENILLSKQLIPS--GASFCLV 252
Query: 180 SSAYHLKR 187
++ YHL R
Sbjct: 253 TNRYHLFR 260
>gi|170756849|ref|YP_001782427.1| hypothetical protein CLD_1753 [Clostridium botulinum B1 str. Okra]
gi|169122061|gb|ACA45897.1| putative membrane protein [Clostridium botulinum B1 str. Okra]
Length = 351
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P+ KK IIVL G+G + R+ P S RI + + +YK + II +
Sbjct: 159 PKRKKYDYIIVL-GSG------LIGDRVPPLLAS--RIDKGIEIYKRQLKKGNPSKIIFT 209
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-----MQGK 174
G ++E + + G+ + + +E Q+++T++N S +++ +
Sbjct: 210 GAKGADEKISEGLAMWKYAKDKGIPTEHMIIEDQAVNTYENLYNSKKLLEEDYKAREKEY 269
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I+V++ +HL RS ++ + G+ + S Y+S+ L ++EYIG++
Sbjct: 270 RCIVVTNNFHLFRSLIWARIVGLECDGAGSK-TKLYFSLNAL----------IREYIGVM 318
Query: 235 IAYYRGN 241
Y + N
Sbjct: 319 YIYKKIN 325
>gi|254228166|ref|ZP_04921595.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262393992|ref|YP_003285846.1| hypothetical protein VEA_003221 [Vibrio sp. Ex25]
gi|151939239|gb|EDN58068.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262337586|gb|ACY51381.1| hypothetical protein VEA_003221 [Vibrio sp. Ex25]
Length = 209
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
++LYK K +++SGG+ E L +GV DI LE + +T +
Sbjct: 68 AVQLYKEKKV----SKLLLSGGNLAIDRKPEFESMREYALTNGVSESDIILEPHAKNTVE 123
Query: 160 NAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQH 194
NAQFS+ +I + K++ ++++A+H+KR++ F++
Sbjct: 124 NAQFSTEIIVESEVAKKSVAILTTAFHIKRAKHLFKN 160
>gi|220929859|ref|YP_002506768.1| hypothetical protein Ccel_2459 [Clostridium cellulolyticum H10]
gi|220000187|gb|ACL76788.1| protein of unknown function DUF218 [Clostridium cellulolyticum H10]
Length = 256
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P+ R+ T+ YK + II+SGG + + E+ L++ + + I
Sbjct: 116 PTLVLKKRLDYTLEYYK----LNPDVRIIVSGGQGKGETITEAEAMKRYLVKHNIHENII 171
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFGIN 198
E +S T++N Q+S ++ +N GK ++++++ +H+ R+++ + G+
Sbjct: 172 LKEERSTSTYENMQYSKNLYENTMGKPLGKVMIITNDFHMFRAKILAKRAGLK 224
>gi|325284148|ref|YP_004256689.1| hypothetical protein Deipr_1940 [Deinococcus proteolyticus MRP]
gi|324315957|gb|ADY27072.1| protein of unknown function DUF218 [Deinococcus proteolyticus MRP]
Length = 212
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
A R P+FQ R+ + LY++ H TI+++GG E V + L GV
Sbjct: 44 AGRPSPAFQV--RLDHALELYRAGGVH----TIVVTGGRQAGDPYTEGGVGVSYLQRRGV 97
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ +K E +S T QN +++ ++ + +V+ H R+ + G N AS
Sbjct: 98 PAEVLKAEERSRTTAQNLNYAAELLPPHAA--VTVVTDRAHAPRALAMARDIGFNANASP 155
Query: 204 S 204
S
Sbjct: 156 S 156
>gi|293401028|ref|ZP_06645173.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306054|gb|EFE47298.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 261
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG Q +E+ L++ GV I +E S++T +N FS +++ K+
Sbjct: 143 LIVSGGKGQAETCSEASAMKQYLIQHGVAESRILMEDASMNTQENLAFSKVLMEKYHIKS 202
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTEL 225
++++ +H+ R+ I T S + S + L+ NFY E
Sbjct: 203 ASIITNDFHMFRAGF------IATSLGLSYHNYPARSDLDLAPNFYFREF 246
>gi|218896648|ref|YP_002445059.1| hypothetical protein BCG9842_B3664 [Bacillus cereus G9842]
gi|218542086|gb|ACK94480.1| conserved hypothetical protein [Bacillus cereus G9842]
Length = 192
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 28/174 (16%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS-YQRPLLSPQWKKDGNIIVLLG---NG 75
+RK M C +++ +I + + LQ+ Y+ ++ + D + I++LG NG
Sbjct: 1 MRKKKIMKCILVVI------MICAVYMGFLQYHIYKHGHMNATY--DADYIIVLGSKVNG 52
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
T +PS+ RI + KS ++ I+SGG + ++E++
Sbjct: 53 T-----------KPSYSLQYRIDKAAEYLKSHEK----TIAIVSGGQGKGEDISEALAMK 97
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
L++ + D I +E +S T +N FS +I K +I V++ +H+ R++
Sbjct: 98 QGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTNDFHMFRAK 150
>gi|116630379|ref|YP_819532.1| hypothetical protein LGAS_1839 [Lactobacillus gasseri ATCC 33323]
gi|238852784|ref|ZP_04643190.1| integral membrane protein [Lactobacillus gasseri 202-4]
gi|282850700|ref|ZP_06260075.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
gi|311111615|ref|ZP_07713012.1| putative membrane protein [Lactobacillus gasseri MV-22]
gi|116095961|gb|ABJ61113.1| hypothetical protein LGAS_1839 [Lactobacillus gasseri ATCC 33323]
gi|238834634|gb|EEQ26865.1| integral membrane protein [Lactobacillus gasseri 202-4]
gi|282558108|gb|EFB63695.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
gi|311066769|gb|EFQ47109.1| putative membrane protein [Lactobacillus gasseri MV-22]
Length = 373
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 18/125 (14%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG + L+E+ N ++ G + D I LE +S +T+QN +S ++ G +
Sbjct: 228 LIMSGGQGKDEDLSEAEAMKNYAVKRGYDPDLILLEDKSTNTYQNMIYSKAVAIKDYGSD 287
Query: 176 II---LVSSAYHLKRSQLY--FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
++ YHL R+ LY H N S + + ++L ++E+
Sbjct: 288 KFKAKFFTNNYHLFRAGLYAKMAHLKANGIGSTTRF-------------YFLPNATIREF 334
Query: 231 IGILI 235
G+ I
Sbjct: 335 AGVFI 339
>gi|33152333|ref|NP_873686.1| hypothetical protein HD1239 [Haemophilus ducreyi 35000HP]
gi|33148556|gb|AAP96075.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 256
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK---LETQS 154
E MR Y + ++++GG P +I + + D++ +E+ S
Sbjct: 112 LERMR-YAAYLHKQTRLPVLVTGGSPTGKQPEANI-----MAQEFANFFDVQVKWIESAS 165
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT-KASCSDY--LN--A 209
T +NA + +++ IILV++ +H+KR+++ F+ G N AS S Y LN
Sbjct: 166 NITEENAHLTKAILDKEGITKIILVTNEWHMKRAKMLFEREGFNVLAASTSSYEGLNIIG 225
Query: 210 YYSIIPLSANFYLTELALKEYIG 232
IP + + +ALKE++G
Sbjct: 226 VLPFIPQAIAMQNSSIALKEWLG 248
>gi|255319326|ref|ZP_05360543.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|262379770|ref|ZP_06072926.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255303719|gb|EET82919.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|262299227|gb|EEY87140.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 379
Score = 42.7 bits (99), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK-QHSMHCTIIISGGDPQKHG 127
IV+LG G T+ I + Y+R +RL K+ + + H I++SG
Sbjct: 216 IVVLGGGLTLADNQKDIVV----NKYTR----LRLEKTLEVEKQYHLPIVLSG------- 260
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHLK 186
E+ L E VE LE +S++T +N++FSS +++ G +IL++ YH+
Sbjct: 261 -VEAPYMQAWLKERNVEAK--LLENRSMNTCENSRFSSLLLQKKGGAPTVILITDVYHMP 317
Query: 187 RSQLYFQHFGINT 199
R++ F GI T
Sbjct: 318 RTRRLFALNGIET 330
>gi|295398606|ref|ZP_06808637.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
gi|294973146|gb|EFG48942.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
Length = 345
Score = 42.7 bits (99), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Query: 116 IIISGGDPQKHG-LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM----IKN 170
II+SG ++E+ + + L++ GV + I LE Q+ +T +N ++ + +K
Sbjct: 207 IIVSGTSTGAESQVSEARIMADYLVDHGVPPEMILLEDQAHNTHENFIYAKGIMQANVKQ 266
Query: 171 MQGKNIILVSSAYHLKRSQLY------FQHFGINTKASCSD 205
++ + V+S+YHL RSQLY +Q G+ +A+ +
Sbjct: 267 LKTTKAVFVTSSYHLYRSQLYANMEGLYQMSGVGAQATMME 307
>gi|227111948|ref|ZP_03825604.1| hypothetical protein PcarbP_03233 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 282
Score = 42.7 bits (99), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 16/235 (6%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K ++ +++L + + LL L+ Y +PQ K I+VL
Sbjct: 31 WFTQRQRTGKAIILASWLMLI-LLSLQPVADRLLLPLESHYPTWRQTPQASKAEYIVVLG 89
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G T P+ + S R+ E +RLY + + +I +GG Q + ++ +
Sbjct: 90 GGYTYNAEWAPSSNL--ISNSLPRVTEGVRLYHA----NPGAKLIFTGGAAQGNPVSSAK 143
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
G+ + DI + DT + A ++ ++ + +LV+SA HL R+ +F
Sbjct: 144 TAALVAESLGIPQQDIIILDTPRDTEEEAAATAKIVGE---RPFLLVTSANHLPRAMRFF 200
Query: 193 QHFGI------NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
Q G+ + + + LN + + P + +E A E +G L +G
Sbjct: 201 QAQGLAPIPAPANQMAITSALNPWEKVFPSAYYLSHSERAWYETLGRLWQALKGT 255
>gi|168179230|ref|ZP_02613894.1| putative membrane protein [Clostridium botulinum NCTC 2916]
gi|226950231|ref|YP_002805322.1| hypothetical protein CLM_3185 [Clostridium botulinum A2 str. Kyoto]
gi|182669494|gb|EDT81470.1| putative membrane protein [Clostridium botulinum NCTC 2916]
gi|226844033|gb|ACO86699.1| putative membrane protein [Clostridium botulinum A2 str. Kyoto]
Length = 351
Score = 42.7 bits (99), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 86/187 (45%), Gaps = 25/187 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P+ KK IIVL G+G + R+ P S RI + + +YK + II +
Sbjct: 159 PKRKKYDYIIVL-GSG------LIGDRVPPLLAS--RIDKGIEIYKRQLKKGNPSKIIFT 209
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN---MQGKN- 175
G ++E + + + D + +E ++++T++N S +++ +GK
Sbjct: 210 GAKGADEKISEGLAMWKYAKDKDIPTDHMIIEDKAVNTYENLYNSKKLLEEDYKARGKEY 269
Query: 176 -IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I+V++ +HL RS ++ + G+ + S Y+S+ L ++EYIG++
Sbjct: 270 RCIIVTNNFHLFRSLIWARIVGLECDGAGSK-TKLYFSLNAL----------IREYIGVM 318
Query: 235 IAYYRGN 241
Y + N
Sbjct: 319 YIYKKIN 325
>gi|228990732|ref|ZP_04150697.1| hypothetical protein bpmyx0001_14940 [Bacillus pseudomycoides DSM
12442]
gi|228769258|gb|EEM17856.1| hypothetical protein bpmyx0001_14940 [Bacillus pseudomycoides DSM
12442]
Length = 193
Score = 42.7 bits (99), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
EPS+ RI + K+ +Q +I+SGG + ++E+ L+ +
Sbjct: 55 EPSYSLQYRIDKAAEYLKTHEQ----TIVIVSGGKGKGEDISEARAMKKGLMTQSIAEQR 110
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
I +E +S +T +N +FS S+I + K +I V++ +H+ R++ + G+
Sbjct: 111 IIMEDRSTNTDENIEFSKSLIPANKKKGMI-VTNDFHMFRAKKIAEKQGL 159
>gi|154502819|ref|ZP_02039879.1| hypothetical protein RUMGNA_00633 [Ruminococcus gnavus ATCC 29149]
gi|153796702|gb|EDN79122.1| hypothetical protein RUMGNA_00633 [Ruminococcus gnavus ATCC 29149]
Length = 264
Score = 42.7 bits (99), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
IL ++F R + P KK+ +++LG +R E S R + L
Sbjct: 86 ILFLAVEFFIVRAM-RPGRKKNCRYLIVLG---------AQVRGERITDSLKRRLDAALL 135
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
Y Q II+SGG + ++E+ L E V+ + I LE QS T +N +F
Sbjct: 136 YH---QVCPSVKIIVSGGQGKGEDVSEAYAMAQYLREHEVKDEQIMLEDQSRTTRENLRF 192
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQL 190
S + ++ ++ + +V++ +HL R+ L
Sbjct: 193 SKAYLEELK-TPVGIVTNNFHLFRALL 218
>gi|153828978|ref|ZP_01981645.1| transporter [Vibrio cholerae 623-39]
gi|148875509|gb|EDL73644.1| transporter [Vibrio cholerae 623-39]
Length = 363
Score = 42.7 bits (99), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ T+ + K+ + I+++GG PQ H E + + L+E GV I E +
Sbjct: 213 RLETTLDMAKANPE----AMIVLTGGVPQNHK-TEGKLMADWLIERGVSAARIIEENYAT 267
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
T NA +SS + K+ ++SSA H++R Q F+
Sbjct: 268 STVDNALYSSYALARHGIKHATIISSASHVRRGQTLFE 305
>gi|294675706|ref|YP_003576321.1| hypothetical protein RCAP_rcc00149 [Rhodobacter capsulatus SB 1003]
gi|294474526|gb|ADE83914.1| protein of unknown function DUF218 [Rhodobacter capsulatus SB 1003]
Length = 187
Score = 42.7 bits (99), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
S S + + LY+S + T++ISG G AE Y + L +GV + LE
Sbjct: 33 SVSSLHPAIALYRS----GLTRTLLISGAGTAVDGSAEWSFYRDHALRAGVAESALLLEK 88
Query: 153 QSLDTFQNAQFSSSMIKNMQG----KNIILVSSAYHLKRSQLYFQH 194
+ +T +NA F +++I G +++ + + +H++R+ + +
Sbjct: 89 NARNTAENAAFGAALIGTELGWAKIRSLAVCAKPFHMRRALMTLRR 134
>gi|229527925|ref|ZP_04417316.1| hypothetical protein VCG_000999 [Vibrio cholerae 12129(1)]
gi|229334287|gb|EEN99772.1| hypothetical protein VCG_000999 [Vibrio cholerae 12129(1)]
Length = 363
Score = 42.7 bits (99), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ T+ + K+ + I+++GG PQ H E + + L+E GV I E +
Sbjct: 213 RLETTLDMAKANPE----AMIVLTGGVPQNHK-TEGKLMADWLIERGVSAARIIEENYAT 267
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
T NA +SS + K+ ++SSA H++R Q F+
Sbjct: 268 STVDNALYSSYALARHGIKHATIISSASHVRRGQTLFE 305
>gi|110597106|ref|ZP_01385395.1| Protein of unknown function DUF218 [Chlorobium ferrooxidans DSM
13031]
gi|110341297|gb|EAT59762.1| Protein of unknown function DUF218 [Chlorobium ferrooxidans DSM
13031]
Length = 249
Score = 42.7 bits (99), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSS 181
Q + E + + GV + I L + +T A + ++ G K IILV+S
Sbjct: 125 QPDAVPEGELLAKRATLLGVPENAILLTAVAGNTADEAVAAGKLLGVRSGVRKKIILVTS 184
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL---NAYYSI---IPLSANFYLTELALKEYIGILI 235
A+H++R+ + F+ G D+ N+ +I +P + ++ +AL+E IG L
Sbjct: 185 AFHMRRAAMQFEKAGFQVDRYPVDFQAGDNSEMTILDFLPDAGALEMSSIALREMIGWLY 244
Query: 236 AYYRG 240
+ +G
Sbjct: 245 YWVKG 249
>gi|229824827|ref|ZP_04450896.1| hypothetical protein GCWU000182_00176 [Abiotrophia defectiva ATCC
49176]
gi|229790830|gb|EEP26944.1| hypothetical protein GCWU000182_00176 [Abiotrophia defectiva ATCC
49176]
Length = 211
Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIK--NMQGKNIILVSSAYHLKRSQLYFQH 194
L+++GVE DI +E ++ +T++NA FS ++K N+ K I+ A+H +R+ + + H
Sbjct: 97 LVKNGVENKDILIEEKATNTYENAIFSRDLLKENNLTVKKAIICPQAFHARRAFMTYSH 155
>gi|229526278|ref|ZP_04415682.1| hypothetical protein VCA_000395 [Vibrio cholerae bv. albensis
VL426]
gi|297579775|ref|ZP_06941702.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|229336436|gb|EEO01454.1| hypothetical protein VCA_000395 [Vibrio cholerae bv. albensis
VL426]
gi|297535421|gb|EFH74255.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 363
Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ T+ + K+ + I+++GG PQ H E + + L+E GV I E +
Sbjct: 213 RLETTLDMAKANPE----AMIVLTGGVPQNHK-TEGKLMADWLIERGVSAARIIEENYAT 267
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
T NA +SS + K+ ++SSA H++R Q F+
Sbjct: 268 STVDNALYSSYALARHGIKHATIISSASHVRRGQTLFE 305
>gi|255513632|gb|EET89897.1| protein of unknown function DUF218 [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 295
Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 115 TIIISGG----DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
I+ SGG +K L ES + G + E +S+DT NA +SS +I+
Sbjct: 111 AILFSGGWSFKHRRKPRLTESEGMRRYAVSLGAPASALITEKRSMDTIGNALYSSKIIRK 170
Query: 171 MQG-KNIILVSSAYHLKRSQLYFQ 193
M+G K I+LV+ AYH+ R+ F+
Sbjct: 171 MRGTKRILLVAVAYHMPRASYIFR 194
>gi|168184465|ref|ZP_02619129.1| putative membrane protein [Clostridium botulinum Bf]
gi|237796257|ref|YP_002863809.1| hypothetical protein CLJ_B3049 [Clostridium botulinum Ba4 str. 657]
gi|182672403|gb|EDT84364.1| putative membrane protein [Clostridium botulinum Bf]
gi|229263461|gb|ACQ54494.1| putative membrane protein [Clostridium botulinum Ba4 str. 657]
Length = 351
Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 86/187 (45%), Gaps = 25/187 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P+ KK IIVL G+G + R+ P S RI + + +YK + II +
Sbjct: 159 PKRKKYDYIIVL-GSG------LIGDRVPPLLAS--RIDKGIEIYKRQLKKGNPSKIIFT 209
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN---MQGKN- 175
G ++E + + + D + +E ++++T++N S +++ +GK
Sbjct: 210 GAKGADEKISEGLAMWKYAKDKDIPTDHMIIEDKAVNTYENLYNSKKLLEEDYKARGKEY 269
Query: 176 -IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I+V++ +HL RS ++ + G+ + S Y+S+ L ++EYIG++
Sbjct: 270 RCIIVTNNFHLFRSLIWARIVGLECDGAGSK-TKLYFSLNAL----------IREYIGVM 318
Query: 235 IAYYRGN 241
Y + N
Sbjct: 319 YIYKKIN 325
>gi|197119576|ref|YP_002140003.1| hypothetical protein Gbem_3208 [Geobacter bemidjiensis Bem]
gi|197088936|gb|ACH40207.1| YdcF-like protein of unknown function DUF218 [Geobacter
bemidjiensis Bem]
Length = 196
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 17/102 (16%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAESIVYNNKLLESGVERDDIKLET 152
R+ E ++LY++ + + + G DP +KH L + G +++ LE
Sbjct: 50 GRVEEGVKLYRAGQGK----LLFLIGVDPLVKKHELYQ-----------GAGAENVYLEK 94
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
S +T +NA ++ MI + +I L++S YH+KRS + F++
Sbjct: 95 TSRNTLENAIYARDMIMKHKVSSIKLITSRYHMKRSTILFRN 136
>gi|153825737|ref|ZP_01978404.1| transporter [Vibrio cholerae MZO-2]
gi|149740576|gb|EDM54687.1| transporter [Vibrio cholerae MZO-2]
Length = 363
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ T+ + K+ + I+++GG PQ H E + + L+E GV I E +
Sbjct: 213 RLETTLDMAKANPE----AMIVLTGGVPQNHK-TEGKLMADWLIERGVSAARIIEENYAT 267
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
T NA +SS + K+ ++SSA H++R Q F+
Sbjct: 268 STVDNALYSSYALARHGIKHATIISSASHVRRGQTLFE 305
>gi|18309791|ref|NP_561725.1| hypothetical protein CPE0809 [Clostridium perfringens str. 13]
gi|18144469|dbj|BAB80515.1| hypothetical protein [Clostridium perfringens str. 13]
Length = 206
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 16/118 (13%)
Query: 102 RLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL + K +H +I+SG + ES N L+ G+ + I E +S TFQ
Sbjct: 66 RLEEGLKYLELHPNTKVIVSGEQGSNEPIPESEAMKNFLVNKGINPNRIIEEDKSKSTFQ 125
Query: 160 NAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
N +FS ++ ++ +++V+S +HL R++ +DYLN +P
Sbjct: 126 NLEFSKKILEERHADKDEVLIVTSDFHLFRAK------------EIADYLNIKNEGLP 171
>gi|87123192|ref|ZP_01079043.1| hypothetical protein RS9917_05015 [Synechococcus sp. RS9917]
gi|86168912|gb|EAQ70168.1| hypothetical protein RS9917_05015 [Synechococcus sp. RS9917]
Length = 250
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+ L F G++ +L + L+ +QR L + IV+L G P A R+
Sbjct: 39 LALLWFFSLGLVSQVLWRWLEAPWQR--LPAAAAPTADAIVVLSGGRHPAPG--AARVS- 93
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG-LAESIVYNNKLLESGVERDDI 148
++ R + LY++ K + + G P + G E Y + + G+ + +
Sbjct: 94 EWEDPDRFLAGLDLYRAGKAPRL---LFTGGASPFRPGQPPEGQRYLAEAEQLGIPSEAM 150
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
++T + A +++ + I+LV+SA+H++R+Q F+ G+ K D+
Sbjct: 151 ASTPVVVNTAEEAVAIRRLLQAPSAR-ILLVTSAFHMRRAQRLFERQGLEVKPFPVDF 207
>gi|21229858|ref|NP_635775.1| hypothetical protein XCC0380 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66766735|ref|YP_241497.1| hypothetical protein XC_0392 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188989803|ref|YP_001901813.1| hypothetical protein xccb100_0407 [Xanthomonas campestris pv.
campestris str. B100]
gi|21111359|gb|AAM39699.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572067|gb|AAY47477.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167731563|emb|CAP49738.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris]
Length = 205
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++I++LG R P F+ RI + LY + ++ H ++ +GG
Sbjct: 49 DVIIVLGAAAY------DARPSPVFEE--RIRHALDLY--ARGYAPH--LLFTGGFGNGA 96
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
AES V L GV + I +ET S T QN + ++++ I+VS H+
Sbjct: 97 RFAESQVARRYALRHGVPSEAIVIETSSRTTRQNLLQARALMERHGMHRAIIVSDPLHMA 156
Query: 187 RSQLYFQHFGINTKASCS 204
R+ Q G++ AS +
Sbjct: 157 RALRLCQELGVDALASST 174
>gi|313622511|gb|EFR92931.1| conserved hypothetical protein [Listeria innocua FSL J1-023]
Length = 189
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+I+SGG E+ V L+ G+ ++ I+ ET+S T +N ++S+ K
Sbjct: 75 KTKVIVSGGQGADETTTEAAVMEEYLVNEGIAKNRIEKETKSKRTEENIKYSNE--KFDL 132
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGIN 198
GK +I V+S YH+ R+ + + GI+
Sbjct: 133 GKTVI-VTSDYHMYRALMLAKRQGID 157
>gi|254228155|ref|ZP_04921584.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262393954|ref|YP_003285808.1| hypothetical protein VEA_003183 [Vibrio sp. Ex25]
gi|151939228|gb|EDN58057.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262337548|gb|ACY51343.1| hypothetical protein VEA_003183 [Vibrio sp. Ex25]
Length = 205
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
++LYK K +++SGG+ E L +GV DI LE + +T +
Sbjct: 64 AVQLYKEKKV----SKLLLSGGNLAIDRKPEFESMREYALTNGVSESDIILEPHAKNTVE 119
Query: 160 NAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQH 194
NAQFS+ +I + K++ ++++A+H+KR++ F++
Sbjct: 120 NAQFSTEIIVESEVAKKSVAILTTAFHIKRAKHLFKN 156
>gi|34499564|ref|NP_903779.1| hypothetical protein CV_4109 [Chromobacterium violaceum ATCC 12472]
gi|34105415|gb|AAQ61770.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 199
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI ++LY+S K I+ +GG P+ AE+ V GV
Sbjct: 55 KPSPVFRERINHAVKLYQSGKVR----WIVFTGGTPEPGYPAEADVGREFAARQGVPMTA 110
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ +E QS T+QN + + ++ +LVS H++R+ L G+
Sbjct: 111 MLVENQSRTTWQNLSNARDLGNQFGIRSYLLVSDPLHMRRAVLMAGDLGLRA 162
>gi|320106656|ref|YP_004182246.1| hypothetical protein AciPR4_1429 [Terriglobus saanensis SP1PR4]
gi|319925177|gb|ADV82252.1| protein of unknown function DUF218 [Terriglobus saanensis SP1PR4]
Length = 223
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH-GLAESIVYNNKLLESGVERDD 147
PS ++R+ + LY+ S+ +I GG K G E V + LL +G+ D
Sbjct: 66 PSPVYHARLDHAVTLYRR----SIAPIVITLGGSGDKRSGATEGGVGRDYLLANGIPFDH 121
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHLKR 187
I ET+S+DT Q A+ S + I +++G I++VS + HL R
Sbjct: 122 IIAETRSIDTEQQAE-SLATIAHVRGLHRIVVVSDSTHLFR 161
>gi|261492344|ref|ZP_05988906.1| transporter [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261496130|ref|ZP_05992538.1| transporter [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261308232|gb|EEY09527.1| transporter [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261312027|gb|EEY13168.1| transporter [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 372
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ + ++ K Q II+SGG K AE+ V L E+G+E+D + L+ + D
Sbjct: 227 LLDRLQKTKEMAQKFPQAKIIVSGG-AVKTEFAEADVMAKWLSENGIEKDRLLLDPVARD 285
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS----QLYFQHFG 196
T NA +++ GK ++ + + H+ R+ + Y QH G
Sbjct: 286 TPGNAVGIIKLMQTYNGKKVLGIGTLQHIPRATAVLKGYAQHIG 329
>gi|254360530|ref|ZP_04976679.1| hypothetical protein MHA_0079 [Mannheimia haemolytica PHL213]
gi|153091070|gb|EDN73075.1| hypothetical protein MHA_0079 [Mannheimia haemolytica PHL213]
Length = 372
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ + ++ K Q II+SGG K AE+ V L E+G+E+D + L+ + D
Sbjct: 227 LLDRLQKTKEMAQKFPQAKIIVSGG-AVKTEFAEADVMAKWLSENGIEKDRLLLDPVARD 285
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS----QLYFQHFG 196
T NA +++ GK ++ + + H+ R+ + Y QH G
Sbjct: 286 TPGNAVGIIKLMQTYNGKKVLGIGTLQHIPRATAVLKGYAQHIG 329
>gi|312622108|ref|YP_004023721.1| hypothetical protein Calkro_1031 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202575|gb|ADQ45902.1| protein of unknown function DUF218 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 195
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 13/145 (8%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+S + KK IIVL G + P+ P F+ R+ LYK K ++ + I+
Sbjct: 31 ISAKPKKSDCIIVL---GCAVYGDFPS----PFFRE--RLNRAFELYK--KGYARY--IV 77
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+ G ++E+ L+E GV + E +S T++N + ++ K+ I
Sbjct: 78 VCGAKGPGENISEAEAGKRYLVEMGVLPKFVLKEDKSFSTYENLLHAKRVMNKKGFKSAI 137
Query: 178 LVSSAYHLKRSQLYFQHFGINTKAS 202
+VS+ +HL+R+ L + IN+ S
Sbjct: 138 IVSNMFHLERAHLIAKKLKINSSFS 162
>gi|325680889|ref|ZP_08160426.1| putative membrane protein [Ruminococcus albus 8]
gi|324107353|gb|EGC01632.1| putative membrane protein [Ruminococcus albus 8]
Length = 497
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 12/119 (10%)
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NMQGKNII 177
SGG ++E+ L+ G+ DDI E +S +T +N +FS I+ + + I+
Sbjct: 365 SGGQGSDEVISEAESMRRYLISKGISDDDIIAEDKSANTEENMRFSLEKIRADCEEPKIV 424
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+S YH+ RS + ++ G++ S + ++ A++E++G+L++
Sbjct: 425 FSTSNYHVLRSGIISKNEGLDADGVGSK-----------TRWYFWPNAAVREFVGLLVS 472
>gi|108763026|ref|YP_634765.1| hypothetical protein MXAN_6648 [Myxococcus xanthus DK 1622]
gi|108466906|gb|ABF92091.1| hypothetical protein MXAN_6648 [Myxococcus xanthus DK 1622]
Length = 292
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
GV + LE S T NA+ ++ +++ + + +++VS YHL R++ YF+ +G
Sbjct: 190 GVPAEACVLEEGSHSTDDNARLTAEVLRGLGARRVVVVSDPYHLLRARNYFRLYG 244
>gi|331014754|gb|EGH94810.1| hypothetical protein PLA106_02555 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 256
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 24/190 (12%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI---FETMRLYKSCKQHSMHCTIIISG 120
+ + IV+LGNG R P++ + + E +RL + S I+ +G
Sbjct: 78 QQADAIVVLGNGRE--------RNSPTWGADTPTGLGLERLRLAARLAKES-GLPILTAG 128
Query: 121 GDPQKHGLAESIVYNNKLLES-GVERDDIKL-ETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G +E+ + L + GV ++ E S T++NA ++++++ K ++L
Sbjct: 129 GLHFDQPPSEASIMAQALQQDFGV---TVRWQEGLSRTTWENATMTAAVLQPQGIKRVVL 185
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGI 233
V+ A+H+ R++ F+ G ++ +L + +P S F + + L E G+
Sbjct: 186 VTQAWHMPRARWSFEQAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGL 245
Query: 234 LI--AYYRGN 241
L+ YRG
Sbjct: 246 LVYPWIYRGG 255
>gi|254711639|ref|ZP_05173450.1| hypothetical protein BpinB_15584 [Brucella pinnipedialis B2/94]
gi|261319263|ref|ZP_05958460.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261298486|gb|EEY01983.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
Length = 205
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
I P R + +L+K + I++ GD + ++ + ++ GV
Sbjct: 37 IVPGGDGAPRAAQAAQLWKDGRS-----PYILATGD------GDCLLNKHIMMAKGVPPS 85
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ------HFGINTK 200
I +E ++ T+QNA+FS+ +++ + K+ ++V++ +H +R+ F+ HF +
Sbjct: 86 AILVECRAGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTACPQMHFTSSPM 145
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEY 230
A +D + P + E +KEY
Sbjct: 146 AD-ADMPGGFPGTPP------VIEHVVKEY 168
>gi|218767273|ref|YP_002341785.1| putative periplasmic protein [Neisseria meningitidis Z2491]
gi|121051281|emb|CAM07557.1| putative periplasmic protein [Neisseria meningitidis Z2491]
gi|319409538|emb|CBY89825.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
WUE 2594]
Length = 218
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS RI + LY+S + I+ +GG +K + E+ V L+ GV +I
Sbjct: 67 PSPVFRERINHAIALYQSRRVGK----IVFTGGRTKKGYMTEAEVGRRYALKQGVPARNI 122
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 123 LFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSAT 178
>gi|168234855|ref|ZP_02659913.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194734850|ref|YP_002113116.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|194710352|gb|ACF89573.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197291873|gb|EDY31223.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 206
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P FQ+ R+ + LY+ QH + ++++GG ++++ + +LE G+ I
Sbjct: 57 PVFQA--RLDHAIWLYQ---QHIVRA-LVLTGGYGAGATVSDAAIARQYVLEKGIPAKAI 110
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+E +S T +N +++ + + Q + +LVS H+ R + Q GI++++S
Sbjct: 111 FIEERSTVTRENIRYAKQIQRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSRSS 164
>gi|325957712|ref|YP_004293124.1| hypothetical protein LAC30SC_10460 [Lactobacillus acidophilus 30SC]
gi|325334277|gb|ADZ08185.1| hypothetical protein LAC30SC_10460 [Lactobacillus acidophilus 30SC]
Length = 367
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 27/186 (14%)
Query: 60 PQWKKDGNIIVL---LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P+ K +IVL L NG + + A RI + Q +R ++ R I
Sbjct: 173 PRRYKQDYLIVLGAGLLNGDQVSKLLAA-RINRAIQFSNRQYQKGR---------KRPII 222
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN- 175
I+SGG + E + GV D I +E QS +T+QN FS + G
Sbjct: 223 IMSGGQGPDEKIPEGLAMARFAQHRGVPTDQILIEDQSKNTYQNMLFSKRVATKDFGSEK 282
Query: 176 --IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
S+ YH+ R+ L + G+ + + +YL ++E+ G+
Sbjct: 283 FRATFFSNNYHIIRAALLAKEVGLKANGVGA-----------FTRLYYLPNAIIREFAGV 331
Query: 234 LIAYYR 239
+ + R
Sbjct: 332 FVMHKR 337
>gi|94969638|ref|YP_591686.1| hypothetical protein Acid345_2611 [Candidatus Koribacter versatilis
Ellin345]
gi|94551688|gb|ABF41612.1| protein of unknown function DUF218 [Candidatus Koribacter
versatilis Ellin345]
Length = 202
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ M +I +GG +E V + LL++GV + ETQ DT Q+A+ + ++
Sbjct: 77 RQDMAPFVITTGGAGGDLHFSEGGVGRDYLLKNGVPDASLIGETQGGDTAQSAERVAVIM 136
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ K + VS AYHL R + + G+ S
Sbjct: 137 RTNGMKTCLAVSDAYHLFRVKRMMEEQGMECYGS 170
>gi|159186332|ref|NP_355852.2| hypothetical protein Atu4812 [Agrobacterium tumefaciens str. C58]
gi|159141466|gb|AAK88637.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 232
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 19/98 (19%)
Query: 115 TIIISGGD-PQKHGLAESIVYNNK------------------LLESGVERDDIKLETQSL 155
I++ GGD P + A + + K L+ SGV+ + E SL
Sbjct: 75 VIVVLGGDGPPRAAQAAKLWHEGKAPLVLVTGYGDCDFIRDMLVRSGVDFAAVSTECLSL 134
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
T++NA F+ ++ M K ILV+S +H +R+ F+
Sbjct: 135 STWENATFAQPILTGMGAKRAILVTSWFHSRRAVKRFR 172
>gi|327184361|gb|AEA32808.1| hypothetical protein LAB52_09530 [Lactobacillus amylovorus GRL
1118]
Length = 367
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 27/186 (14%)
Query: 60 PQWKKDGNIIVL---LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P+ K +IVL L NG + + A RI + Q +R ++ R I
Sbjct: 173 PRHYKQDYLIVLGAGLLNGDQVSKLLAA-RINRAIQFSNRQYQKGR---------KRPII 222
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK---NMQG 173
I+SGG + E++ GV D I +E QS +T+QN FS + +
Sbjct: 223 IMSGGQGPDEKIPEALAMARFAQHRGVPTDQILIEDQSKNTYQNMLFSKRIATQDFDSDK 282
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
S+ YH+ R+ L + G+ KA+ +Y YL ++E+ G+
Sbjct: 283 FRATFFSNNYHIFRAALLAKEVGL--KANGVGAFTRFY---------YLPNAIIREFAGV 331
Query: 234 LIAYYR 239
+ + R
Sbjct: 332 FVMHKR 337
>gi|299137094|ref|ZP_07030277.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
gi|298601609|gb|EFI57764.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
Length = 222
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS ++R+ + + LY+ + + + GG + G E V + LL +GV D I
Sbjct: 67 PSPVLHARLDKAVALYQ---RGIAPVVVTLGGGGDKDSGNTEGGVGRDYLLANGVPYDKI 123
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
ET+S DT Q + + + + ++I++VS HL R L + G+
Sbjct: 124 IAETESFDTEQQVENLALIAEREHFRHIVVVSDGTHLFRIALLCRRAGL 172
>gi|227532864|ref|ZP_03962913.1| transporter [Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227189503|gb|EEI69570.1| transporter [Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 314
Score = 42.4 bits (98), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I+++GG P+ + L E+ V L+ G+ + I+LE S +T +NA FS + + +
Sbjct: 240 ILVAGGVPE-NKLTEATVMQKWLVAHGIAKKRIELEDLSTNTVENALFSVRELVDRGATS 298
Query: 176 IILVSSAYHLKRS 188
L++SA H++R+
Sbjct: 299 ATLITSATHMRRA 311
>gi|308388228|gb|ADO30548.1| putative periplasmic protein [Neisseria meningitidis alpha710]
Length = 214
Score = 42.4 bits (98), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS RI + LY+S + I+ +GG +K + E+ V L+ GV +I
Sbjct: 67 PSPVFRERINHAIALYQSRRVGK----IVFTGGRTKKGYMTEAEVGRRYALKQGVPARNI 122
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 123 LFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSAT 178
>gi|116873811|ref|YP_850592.1| hypothetical protein lwe2395 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742689|emb|CAK21813.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 189
Score = 42.4 bits (98), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 25/179 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+R+IFF+ L+ S G I I++ +S R P D +++LG
Sbjct: 4 LRRIFFI----LIIS----GCIYLIIVGAFMYSGMRA--KPVEAAD--TVLILGAKVEGD 51
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P +P++ ++ R+ E + + +++SGG E+ V L+
Sbjct: 52 PAVPSLVLK------ERLDEAVTYLNDYPK----TKVVVSGGQGADERTTEASVMEEYLV 101
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
G+ R+ I+ E +S T +N ++S+ K GK +I VSS YH+ R+ + GI+
Sbjct: 102 NEGIARNRIETENKSKRTEENIKYSNE--KFDLGKTVI-VSSDYHMYRALMLANRQGID 157
>gi|229017000|ref|ZP_04173920.1| hypothetical protein bcere0030_15650 [Bacillus cereus AH1273]
gi|229023181|ref|ZP_04179692.1| hypothetical protein bcere0029_15230 [Bacillus cereus AH1272]
gi|228738106|gb|EEL88591.1| hypothetical protein bcere0029_15230 [Bacillus cereus AH1272]
gi|228744271|gb|EEL94353.1| hypothetical protein bcere0030_15650 [Bacillus cereus AH1273]
Length = 159
Score = 42.4 bits (98), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS + I+SGG
Sbjct: 6 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHDK----TIAIVSGG 50
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ + E++ L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 51 QGKGEDITEALAMKQGLMKQNIAEDRIIMEDRSTSTDENIKFSKPLIPDKMKKGMI-VTN 109
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 110 DFHMFRAK 117
>gi|222055241|ref|YP_002537603.1| protein of unknown function DUF218 [Geobacter sp. FRC-32]
gi|221564530|gb|ACM20502.1| protein of unknown function DUF218 [Geobacter sp. FRC-32]
Length = 198
Score = 42.4 bits (98), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER--DDIKLET 152
RI E RLY+ + H+ +I G DP S+ ++ E ER + + LE
Sbjct: 50 GRIEEGSRLYR--ENHARWLFLI--GVDP-------SVRKSDLFRERKGERSGEGVYLEK 98
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
S +T +NA ++ MI +I L++S YH+KR+ L F+H
Sbjct: 99 VSRNTLENALYAREMIVGRNIDSIELITSRYHMKRATLIFRH 140
>gi|255655858|ref|ZP_05401267.1| hypothetical protein CdifQCD-2_09204 [Clostridium difficile
QCD-23m63]
gi|296450861|ref|ZP_06892611.1| conserved hypothetical protein [Clostridium difficile NAP08]
gi|296879136|ref|ZP_06903131.1| conserved hypothetical protein [Clostridium difficile NAP07]
gi|296260332|gb|EFH07177.1| conserved hypothetical protein [Clostridium difficile NAP08]
gi|296429679|gb|EFH15531.1| conserved hypothetical protein [Clostridium difficile NAP07]
Length = 248
Score = 42.4 bits (98), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---- 168
+C +++SGG + E+ + L+++G++++ I E +S +T++N ++S I
Sbjct: 125 NCYVVVSGGKGSGENITEAKAMKDYLIKNGIDKNRIIEEDKSTNTYENFKYSKFKIEERS 184
Query: 169 -KNMQGKNIILVSSAYHLKRSQL 190
+ + + +V++ +H+ RS++
Sbjct: 185 ERKLSDLKVKIVTTDFHVLRSKI 207
>gi|162449130|ref|YP_001611497.1| hypothetical protein sce0860 [Sorangium cellulosum 'So ce 56']
gi|161159712|emb|CAN91017.1| hypothetical protein sce0860 [Sorangium cellulosum 'So ce 56']
Length = 185
Score = 42.4 bits (98), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 43/83 (51%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+I+ G + E+ V +L +GV I + SL T +NA FS+++++ + +
Sbjct: 48 VIASGGRRWGAQVEARVLAAELRRAGVPAHAILQDLWSLTTHENAIFSAALLRRVGARRA 107
Query: 177 ILVSSAYHLKRSQLYFQHFGINT 199
+V+ ++H+ R+ F GI+
Sbjct: 108 AIVTCSWHMARALQNFHDVGIDA 130
>gi|302871560|ref|YP_003840196.1| hypothetical protein COB47_0901 [Caldicellulosiruptor obsidiansis
OB47]
gi|302574419|gb|ADL42210.1| protein of unknown function DUF218 [Caldicellulosiruptor
obsidiansis OB47]
Length = 195
Score = 42.4 bits (98), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 15/146 (10%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+S + KK IIVL G + P+ P F+ R+ + LYK K ++ + II
Sbjct: 31 ISAKPKKSDCIIVL---GCAVYGNFPS----PFFRE--RLNKAFELYK--KDYARY--II 77
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNI 176
+ G ++E+ L+ GV + I E +S T++N + I N +G K+
Sbjct: 78 VCGAKGAGENISEAEAGKRYLIGKGVLPEFILKEDRSFSTYENL-LNVKRIMNRRGFKSA 136
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKAS 202
I+VS+ +HL+R+ L + IN S
Sbjct: 137 IIVSNMFHLERAYLIAKKLKINASVS 162
>gi|225019145|ref|ZP_03708337.1| hypothetical protein CLOSTMETH_03097 [Clostridium methylpentosum
DSM 5476]
gi|224948092|gb|EEG29301.1| hypothetical protein CLOSTMETH_03097 [Clostridium methylpentosum
DSM 5476]
Length = 188
Score = 42.4 bits (98), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 5/129 (3%)
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+GT I+ +PS R+ + K + I+SGG + +E+ +
Sbjct: 36 DGTVIVLGCHIKGDQPSVMLAGRLDKAAEFLK----ENPRANCIVSGGRGKDEMYSEAEI 91
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYF 192
L E G+ I E QS++T N + S M++ GK ++V+ +H R+QL
Sbjct: 92 MKKYLTEKGISPQRILEENQSVNTQTNLRNSKQMMEEKGLGKTAVIVTDRFHQYRAQLCA 151
Query: 193 QHFGINTKA 201
+N+++
Sbjct: 152 DRIQLNSQS 160
>gi|255065363|ref|ZP_05317218.1| putative SanA protein [Neisseria sicca ATCC 29256]
gi|255050188|gb|EET45652.1| putative SanA protein [Neisseria sicca ATCC 29256]
Length = 224
Score = 42.4 bits (98), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 30/171 (17%)
Query: 74 NGTTIIPTIPAI----------RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ T+ P A+ R+ P +R+ + LY++ K + ++SGG
Sbjct: 61 DADTVRPADAAVVLSTRSYEGGRLNPCL--VARVEAAVELYRAGKVKKL----VMSGGLS 114
Query: 124 QKHGLAESIVYNNKLLES--GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ +S N + + GV ++DI E ++ +TF+N FS I+N +++VS+
Sbjct: 115 RDF---QSASGNMQAIAEKMGVSKEDIIQERRAENTFENIVFSRDFIEN--SPRVVIVSA 169
Query: 182 AYHLKRSQLY----FQHFGINTKAS--CSDYLNAY-YSIIPLSANFYLTEL 225
+HL R+Q+ +Q I A+ CS+ Y ++++ SA F L
Sbjct: 170 GFHLARAQMMADRQWQGHDIQVYAAPFCSEPYGGYGFTVLRESAAFVKNAL 220
>gi|229161985|ref|ZP_04289961.1| hypothetical protein bcere0009_27680 [Bacillus cereus R309803]
gi|228621466|gb|EEK78316.1| hypothetical protein bcere0009_27680 [Bacillus cereus R309803]
Length = 219
Score = 42.4 bits (98), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L ES ++ GV+ +D
Sbjct: 70 KPSPVFKERINHAISLYKNGDIKK----IIFTGGTKFEAELEESRTARVYAMKQGVKDED 125
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 126 ILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 183
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 184 TSAYKTLDTEIPFFFKEL 201
>gi|254490468|ref|ZP_05103654.1| conserved hypothetical protein [Methylophaga thiooxidans DMS010]
gi|224464212|gb|EEF80475.1| conserved hypothetical protein [Methylophaga thiooxydans DMS010]
Length = 276
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L ++G+++ + +ETQ+ +T +N + ++ QG N ILV+SA+H+ RS + GI
Sbjct: 152 LTQAGIDKQRLIIETQARNTAENFFYIKPLLPKQQG-NYILVTSAFHIPRSVGIARKLGI 210
Query: 198 NTKASCSDYL----NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ DY + Y L + + E A E++G L AY+
Sbjct: 211 DVIPYPVDYRSSRPDERYWDFDLFDHLQVLEPAWHEWLG-LTAYF 254
>gi|42782182|ref|NP_979429.1| hypothetical protein BCE_3127 [Bacillus cereus ATCC 10987]
gi|42738107|gb|AAS42037.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 210
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 61 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKEED 116
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 117 ILIETKSLFTEENLKNAKEVGTENGIRTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 174
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 175 TSAYKTLDTEIPFFFKEL 192
>gi|254428687|ref|ZP_05042394.1| conserved hypothetical protein [Alcanivorax sp. DG881]
gi|196194856|gb|EDX89815.1| conserved hypothetical protein [Alcanivorax sp. DG881]
Length = 204
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 55/107 (51%), Gaps = 15/107 (14%)
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD---------DIKLETQSLDTFQN 160
H +++SGG ++++ +++N+ E+ + + ++ E +S +T++N
Sbjct: 71 HEHGLPLLVSGG------ISQTPMHDNEPSEADLMAEQALRRWPTLNVIKEARSRNTWEN 124
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
A FSS ++ ++L+S HL R+ L FQ G+ +A+ S L
Sbjct: 125 ACFSSELLAERGMDEVMLISDRAHLPRALLCFQSQGVLAQAAWSKRL 171
>gi|237748053|ref|ZP_04578533.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229379415|gb|EEO29506.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 203
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
KK + ++LG R P F+ RI + LYK + +I +GG
Sbjct: 32 KKTADAAIILGAAAWYK------RPSPVFEE--RINHGIWLYK----NGYVKKLIATGGK 79
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ +E+ V +++ + +DI +E +SL T +N Q + +++ + I+VS
Sbjct: 80 SKNAPFSEAFVARRYAMKNQIPEEDILIEEESLTTRENLQNAKKLMEENHLSSAIIVSDP 139
Query: 183 YHLKRSQLYFQHFGINTKAS 202
H++R+ GI +S
Sbjct: 140 MHMRRAMQIANDLGIKAWSS 159
>gi|78223525|ref|YP_385272.1| hypothetical protein Gmet_2322 [Geobacter metallireducens GS-15]
gi|78194780|gb|ABB32547.1| protein of unknown function DUF218 [Geobacter metallireducens
GS-15]
Length = 200
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 33/171 (19%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+FF F LL F+ ++ T+L + F+Y+ + + I+VL G
Sbjct: 3 LFFRGLFSLLVIFL---VVATVLF--VDFAYKTFSVRQRDIATDAIVVLAGG-------- 49
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
R+ E +RL+++ K + + G DP + + ++ + ES
Sbjct: 50 -----------RGRVEEGIRLFRAKKGKYL----FLIGVDPM---VRKQELFQERKGESL 91
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+R + LE S +T +NA + +I ++I L++S YH+KR+ L F+
Sbjct: 92 ADR--VVLENASRNTLENALYGREIIDRKDIRSISLITSRYHMKRATLIFR 140
>gi|222095337|ref|YP_002529397.1| hypothetical protein BCQ_1677 [Bacillus cereus Q1]
gi|221239395|gb|ACM12105.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 172
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG NGT +PS+ RI + K+ ++ I+SGG
Sbjct: 19 EADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKAHEK----AIAIVSGG 63
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 64 KGKGEDISEALAMKNGLMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 122
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 123 DFHMFRAK 130
>gi|229172359|ref|ZP_04299918.1| hypothetical protein bcere0006_14700 [Bacillus cereus MM3]
gi|228610830|gb|EEK68093.1| hypothetical protein bcere0006_14700 [Bacillus cereus MM3]
Length = 194
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + +S ++ I+SGG
Sbjct: 41 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLQSHEK----TIAIVSGG 85
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N L++ + D I +E +S T +N FS +I + K +I V++
Sbjct: 86 KGKGEDISEALAMKNGLMKLKIAEDRIIMEDKSTSTDENITFSKPLIPDNMKKGMI-VTN 144
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 145 DFHMFRAK 152
>gi|116334369|ref|YP_795896.1| hypothetical protein LVIS_1800 [Lactobacillus brevis ATCC 367]
gi|116099716|gb|ABJ64865.1| hypothetical protein LVIS_1800 [Lactobacillus brevis ATCC 367]
Length = 329
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 105 KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
K + S T+I++GG L E+ L+ G ++ I E+++ T N +S
Sbjct: 185 KLAHRQSTPTTLIVTGGQGPDEHLTEAEAMTTYLVNHGWPQERIIQESRATSTLTNLLYS 244
Query: 165 SSMIKNM--QGKNIILVSSAYHLKRSQLYFQHFGI 197
+ + QG +++V++ YHL R++ G+
Sbjct: 245 QRLWSQLPHQGGRVVIVTNNYHLFRAEHLASQLGL 279
>gi|322420740|ref|YP_004199963.1| hypothetical protein GM18_3250 [Geobacter sp. M18]
gi|320127127|gb|ADW14687.1| protein of unknown function DUF218 [Geobacter sp. M18]
Length = 195
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 32/146 (21%)
Query: 49 LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
+ F Y+ LSP+ + I+VL G R+ E +RLY++ +
Sbjct: 23 VDFVYKTFSLSPRDTQADAIVVLTGG-------------------RGRVEEGVRLYRAGQ 63
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ + G DP V +L + E + LE S +T +NA ++ +I
Sbjct: 64 GKKL----FLIGVDPS--------VKKRELFQGDGE-GGVYLEQNSRNTLENAIYARDLI 110
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQH 194
+ ++I L++S YH+KRS + F++
Sbjct: 111 MKHKVRSIKLITSRYHMKRSTILFRN 136
>gi|257785029|ref|YP_003180246.1| hypothetical protein Apar_1229 [Atopobium parvulum DSM 20469]
gi|257473536|gb|ACV51655.1| protein of unknown function DUF218 [Atopobium parvulum DSM 20469]
Length = 378
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
RI + + L+ KQH H ++SGG ++E+ + LLE V D I +E +S
Sbjct: 198 GRINKALELWN--KQHQ-HGKFVVSGGQGADEVVSEAQAMRDYLLEKDVPLDAILMEDKS 254
Query: 155 LDTFQNAQFSSSMIKN 170
T++N ++S +I N
Sbjct: 255 TTTWENLKYSIGIINN 270
>gi|254519553|ref|ZP_05131609.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
gi|226913302|gb|EEH98503.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
Length = 257
Score = 42.0 bits (97), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS R+ +T+ + ++ S II+SGG + ++E+ L+ +G++ +
Sbjct: 110 KPSLTLMQRLDKTIEYVNNQEKES---KIIVSGGQGRGEDISEAQAMKKYLVNNGIKEEL 166
Query: 148 IKLETQSLDTFQNAQFSSSMIK-----NMQGKNIILVSSAYHLKRSQLYFQHFG 196
I +E +S T +N FS ++I+ ++ NI +++S +H RS + + G
Sbjct: 167 IIMENKSTSTNENLIFSKAIIESYTKSDIGDINIKIITSDFHAFRSNMIAKKLG 220
>gi|296533571|ref|ZP_06896140.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296266108|gb|EFH12164.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 165
Score = 42.0 bits (97), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+ +GG +HG E+ V L + GV DI+ E DT +A+ ++++++ G +
Sbjct: 45 VPTGGQ-GRHGPPEAEVMARLLQDLGVPAGDIRQERSGTDTLSSARACAALLRDHAGP-V 102
Query: 177 ILVSSAYHLKRSQLYFQHFGI 197
SS YHL R + + G+
Sbjct: 103 HAASSGYHLPRCVMLLRLHGL 123
>gi|149911645|ref|ZP_01900255.1| hypothetical protein PE36_07911 [Moritella sp. PE36]
gi|149805269|gb|EDM65284.1| hypothetical protein PE36_07911 [Moritella sp. PE36]
Length = 251
Score = 42.0 bits (97), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+++ + I +LG+G T + +P I + + + +R E +R+YK + + SGGD
Sbjct: 74 QQNVDYIHVLGSGHTTVDGLP-ITSQLTPAALTRTTEGVRIYKLNPTAKLIFSGY-SGGD 131
Query: 123 PQKHGLAESIVYNNKL-LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ + N +L + GV + I L Q DT + A + K QGK ++LV+S
Sbjct: 132 -----INSNAKMNARLAMALGVPKSAILLLEQPKDTIEEAIDNK---KITQGKQLVLVTS 183
Query: 182 AYHLKRSQLYFQHFGI 197
A H+ R+ FQ G+
Sbjct: 184 ATHMPRAMKIFQQQGL 199
>gi|84621867|ref|YP_449239.1| hypothetical protein XOO_0210 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188574494|ref|YP_001911423.1| hypothetical protein PXO_03633 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58424447|gb|AAW73484.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84365807|dbj|BAE66965.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188518946|gb|ACD56891.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 205
Score = 42.0 bits (97), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 12/138 (8%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++I++LG R P F+ RI + LY ++ +GG
Sbjct: 49 DVIIVLGAAAY------DARPSPVFEE--RIRHALDLYA----QGYAPRLLFTGGFGNGA 96
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
AES V L G+ + I +ET S T QN + + ++++ I+VS H+
Sbjct: 97 RFAESQVARRYALRHGIPPEAIVIETTSRTTRQNLEQARTLMERHGMHRAIIVSDPLHMA 156
Query: 187 RSQLYFQHFGINTKASCS 204
R+ Q GI+ AS +
Sbjct: 157 RALRLSQELGIDALASST 174
>gi|300716091|ref|YP_003740894.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
gi|299061927|emb|CAX59043.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
Length = 262
Score = 42.0 bits (97), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
S R+ E +RL++ + +I +G Q + ++ + V + GV I
Sbjct: 105 SLPRLVEGIRLWR----ENPGAKLIFTGAAAQNNPVSSAEVTSRVAQSLGVPLSAIVTLD 160
Query: 153 QSLDTFQNAQFSSSMIKNMQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDY----- 206
+ DT Q A + + + GK +LV+SA HL R+ ++FQ G++ + ++
Sbjct: 161 KPRDTRQEA----AEVAKVVGKTPFLLVTSASHLPRAMIFFQQQGLDPLPAPANQLAIDS 216
Query: 207 -LNAYYSIIPLSANFYLTELALKEYIG 232
LN + IP ++ A+ E++G
Sbjct: 217 PLNVWERAIPSPLWLGHSDRAIYEWLG 243
>gi|166714094|ref|ZP_02245301.1| hypothetical protein Xoryp_22305 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 205
Score = 42.0 bits (97), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 12/138 (8%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++I++LG R P F+ RI + LY ++ +GG
Sbjct: 49 DVIIVLGAAAY------DARPSPVFEE--RIRHALDLYA----QGYAPRLLFTGGFGNGA 96
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
AES V L G+ + I +ET S T QN + + ++++ I+VS H+
Sbjct: 97 RFAESQVARRYALRHGIPPEAIVIETTSRTTRQNLEQARTLMERHGMHRAIIVSDPLHMA 156
Query: 187 RSQLYFQHFGINTKASCS 204
R+ Q GI+ AS +
Sbjct: 157 RALRLSQELGIDALASST 174
>gi|261365693|ref|ZP_05978576.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
gi|288565787|gb|EFC87347.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
Length = 224
Score = 42.0 bits (97), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S + I+ +GG +K + E+ V L+ G+
Sbjct: 65 RPSPVFRE--RINHAITLYQSHRVEK----IVFTGGTSKKGYMTEAEVGRRYALKQGIPA 118
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+I E S +T++N + +++ ++II+VS YHL R+
Sbjct: 119 HNIIFENTSRNTYENIRNIRPILRAEGIESIIIVSDPYHLARA 161
>gi|289664371|ref|ZP_06485952.1| hypothetical protein XcampvN_15203 [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289668148|ref|ZP_06489223.1| hypothetical protein XcampmN_06538 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 205
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 12/138 (8%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++I++LG R P F+ RI + LY ++ +GG
Sbjct: 49 DVIIVLGAAAY------DARPSPVFEE--RIRHALDLYA----QGYAPRLLFTGGFGNGA 96
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
AES V L G+ + I +ET S T QN + + ++++ I+VS H+
Sbjct: 97 RFAESQVARRYALRHGIPPEAIVIETTSRTTRQNLEQARTLMERHGMHRAIIVSDPLHMA 156
Query: 187 RSQLYFQHFGINTKASCS 204
R+ Q GI+ AS +
Sbjct: 157 RALRLSQELGIDALASST 174
>gi|309778681|ref|ZP_07673455.1| periplasmic protein [Ralstonia sp. 5_7_47FAA]
gi|308922531|gb|EFP68154.1| periplasmic protein [Ralstonia sp. 5_7_47FAA]
Length = 207
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 6/140 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI E + Y Q+ ++ +GG P +E V ++ GV D
Sbjct: 63 KPSPVYRERINEAITRY----QNKQVRYLVFTGGTPGADYPSEGKVGREYAIKHGVPPDA 118
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I ET S T+QN + ++ + ++LVS HL+R+ G+ +
Sbjct: 119 ILAETTSRTTWQNLVNAKKLLDPLGIHTVLLVSDPLHLRRATAMANDIGLQALPGPTS-- 176
Query: 208 NAYYSIIPLSANFYLTELAL 227
++ + + ANF E+ L
Sbjct: 177 SSRFESLSTRANFLWREIWL 196
>gi|153000003|ref|YP_001365684.1| hypothetical protein Shew185_1471 [Shewanella baltica OS185]
gi|151364621|gb|ABS07621.1| protein of unknown function DUF218 [Shewanella baltica OS185]
Length = 248
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 111/230 (48%), Gaps = 13/230 (5%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ L++S+ +S+ K + +SC + F+ + L++ L+ +Y P+ S
Sbjct: 23 LLLVISFLVWRRRSMAK-YLVSCAFFVLLFLSSQLGVNTLVRPLESAY--PINSTP-ITG 78
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+++LG+ + I A++ S + +R+ E +R +++ + I+SG +
Sbjct: 79 ACFVMVLGSAHSDIQGATAVQ-SLSAVALARLSEGVRQLNLGQEYKL----IVSGWGGEL 133
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
++ + + N +E GV++ I + DT + AQ+ + + + LV+SA H+
Sbjct: 134 TQVSHAEMMANAAVELGVDKRRIIQFPLARDTIEEAQY---LQWELGEEPFRLVTSATHM 190
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA-NFYLTELALKEYIGIL 234
R+ F G++ +A+ +D++ L+A N ++ A+ EYIG L
Sbjct: 191 PRAMAIFTAKGLHPEAAPTDFIGRDDFWWRLTADNLVASQRAIHEYIGRL 240
>gi|228952097|ref|ZP_04114192.1| hypothetical protein bthur0006_15080 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229069269|ref|ZP_04202559.1| hypothetical protein bcere0025_14740 [Bacillus cereus F65185]
gi|229078899|ref|ZP_04211451.1| hypothetical protein bcere0023_15610 [Bacillus cereus Rock4-2]
gi|229178126|ref|ZP_04305497.1| hypothetical protein bcere0005_14880 [Bacillus cereus 172560W]
gi|228605256|gb|EEK62706.1| hypothetical protein bcere0005_14880 [Bacillus cereus 172560W]
gi|228704313|gb|EEL56747.1| hypothetical protein bcere0023_15610 [Bacillus cereus Rock4-2]
gi|228713756|gb|EEL65641.1| hypothetical protein bcere0025_14740 [Bacillus cereus F65185]
gi|228807629|gb|EEM54153.1| hypothetical protein bthur0006_15080 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 194
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 41 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----TIAIVSGG 85
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ L++ + D I +E +S T +N FS +I K +I V++
Sbjct: 86 QGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTN 144
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 145 DFHMFRAK 152
>gi|90414191|ref|ZP_01222172.1| hypothetical protein P3TCK_08988 [Photobacterium profundum 3TCK]
gi|90324741|gb|EAS41279.1| hypothetical protein P3TCK_08988 [Photobacterium profundum 3TCK]
Length = 367
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+G T I T+ + P + + + + + + + I+++GG P+ H E +
Sbjct: 192 DGNTAIITL-GYALNPDGSMHDILIQRLEMTLAFAKEQPKSLIVLTGGVPKNHK-TEGKL 249
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ L+E G++R I + + T +NA +SS + + ++SSA H++R Q F+
Sbjct: 250 MADWLVEKGIDRSRIIEDNYARSTVENALYSSYALARHDIDHATIISSASHVRRGQTLFE 309
>gi|229189814|ref|ZP_04316825.1| hypothetical protein bcere0002_14880 [Bacillus cereus ATCC 10876]
gi|228593622|gb|EEK51430.1| hypothetical protein bcere0002_14880 [Bacillus cereus ATCC 10876]
Length = 194
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 41 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----TIAIVSGG 85
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ L++ + D I +E +S T +N FS +I K +I V++
Sbjct: 86 QGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTN 144
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 145 DFHMFRAK 152
>gi|206970731|ref|ZP_03231683.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|206734367|gb|EDZ51537.1| conserved hypothetical protein [Bacillus cereus AH1134]
Length = 192
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 39 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----TIAIVSGG 83
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ L++ + D I +E +S T +N FS +I K +I V++
Sbjct: 84 QGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTN 142
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 143 DFHMFRAK 150
>gi|326384925|ref|ZP_08206599.1| hypothetical protein SCNU_18362 [Gordonia neofelifaecis NRRL
B-59395]
gi|326196315|gb|EGD53515.1| hypothetical protein SCNU_18362 [Gordonia neofelifaecis NRRL
B-59395]
Length = 210
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 45/78 (57%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II++GG+ + E++ + +L + GV + E ++ T +NAQ + +M+K +
Sbjct: 116 IIVTGGNSWWLPVPEAMFMHAQLAQRGVTPLKVIEEPTAMSTVENAQRTVAMLKGLNASG 175
Query: 176 IILVSSAYHLKRSQLYFQ 193
++V++ +H+KR+ F+
Sbjct: 176 AVIVTNDFHMKRALDNFR 193
>gi|291529907|emb|CBK95492.1| Uncharacterized conserved protein [Eubacterium siraeum 70/3]
Length = 262
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Query: 102 RLYKSCK--QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL +C I+SGG ++E+ L+ G+ + I E +S T++
Sbjct: 131 RLDAACSYLSADTKADCIVSGGKGDNEHISEAEAMYEALVNDGISENRITKEDKSSSTYE 190
Query: 160 NAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
N FS ++++ GK I +V+ +H R++L + G + K C +Y ++P+
Sbjct: 191 NLLFSKQILED-SGKPLRIAIVTDGFHQWRARLQAESLGYDVK--CVSAATPWY-LVPV 245
>gi|261821327|ref|YP_003259433.1| hypothetical protein Pecwa_2047 [Pectobacterium wasabiae WPP163]
gi|261605340|gb|ACX87826.1| protein of unknown function DUF218 [Pectobacterium wasabiae WPP163]
Length = 282
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 24/239 (10%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K ++ +++L + + LL L+ Y +PQ + IV+L
Sbjct: 31 WFTQRQRTGKTMILASWLMLI-LLSLQPVADRLLLPLESQYPTWRQTPQ-ADNAEYIVVL 88
Query: 73 GNGTTIIPTIPAIRIEPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
G G T PS S R+ E +RLY + + +I +GG Q + +
Sbjct: 89 GGGYTY-----NAEWAPSSNLISNSLPRVTEGVRLYHA----NPGAKLIFTGGAAQGNPV 139
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + G+ + DI + DT + A ++ ++ + +LV+SA HL R+
Sbjct: 140 SSAKTAALVAESLGIPQQDIVILDTPRDTEEEAAATAKIVG---ARPFLLVTSANHLPRA 196
Query: 189 QLYFQHFGI------NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+FQ G+ + + + LN + + P + +E A E +G L +G
Sbjct: 197 IRFFQAQGLAPIPAPANQMAITSALNPWEKVFPSAYYLSHSERAWYETLGRLWQSLKGT 255
>gi|311029687|ref|ZP_07707777.1| hypothetical protein Bm3-1_03874 [Bacillus sp. m3-13]
Length = 192
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+ +I SGG + E+ ++ G++ + I LE +S TF+N +S +++++
Sbjct: 76 NTKVIASGGQGPGEDITEAEAMRRYFVKHGIKEERIILEDRSTTTFENLSYSKALMED-- 133
Query: 173 GKNIILVSSAYHLKRSQL 190
G ++ +VS+ +H+ R+ L
Sbjct: 134 GASVAIVSNDFHMYRASL 151
>gi|126699451|ref|YP_001088348.1| hypothetical protein CD1842 [Clostridium difficile 630]
gi|255101014|ref|ZP_05329991.1| hypothetical protein CdifQCD-6_09404 [Clostridium difficile
QCD-63q42]
gi|255306869|ref|ZP_05351040.1| hypothetical protein CdifA_09792 [Clostridium difficile ATCC 43255]
gi|115250888|emb|CAJ68713.1| conserved hypothetical protein, DUF218 family [Clostridium
difficile]
Length = 248
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---- 168
+C +++SGG + E+ + L+++G++++ I E +S +T++N ++S I
Sbjct: 125 NCYVVVSGGKGSGEKITEAKAMKDYLIKNGIDKNRIIEEDKSTNTYENFKYSKLKIEEHS 184
Query: 169 -KNMQGKNIILVSSAYHLKRSQL 190
+ + + +V++ +H+ RS++
Sbjct: 185 QRKLSDLKVKIVTTDFHVLRSKI 207
>gi|229149917|ref|ZP_04278145.1| hypothetical protein bcere0011_14750 [Bacillus cereus m1550]
gi|228633598|gb|EEK90199.1| hypothetical protein bcere0011_14750 [Bacillus cereus m1550]
Length = 194
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 41 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----TIAIVSGG 85
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ L++ + D I +E +S T +N FS +I K +I V++
Sbjct: 86 QGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTN 144
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 145 DFHMFRAK 152
>gi|217959196|ref|YP_002337744.1| hypothetical protein BCAH187_A1788 [Bacillus cereus AH187]
gi|229138411|ref|ZP_04267001.1| hypothetical protein bcere0013_15290 [Bacillus cereus BDRD-ST26]
gi|217065300|gb|ACJ79550.1| conserved hypothetical protein [Bacillus cereus AH187]
gi|228645043|gb|EEL01285.1| hypothetical protein bcere0013_15290 [Bacillus cereus BDRD-ST26]
Length = 159
Score = 41.6 bits (96), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG NGT +PS+ RI + K+ ++ I+SGG
Sbjct: 6 EADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKAHEK----AIAIVSGG 50
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 51 KGKGEDISEALAMKNGLMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTN 109
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 110 DFHMFRAK 117
>gi|254360560|ref|ZP_04976709.1| hypothetical protein MHA_0110 [Mannheimia haemolytica PHL213]
gi|261492312|ref|ZP_05988874.1| hypothetical protein COK_0742 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496099|ref|ZP_05992507.1| hypothetical protein COI_1840 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|153091100|gb|EDN73105.1| hypothetical protein MHA_0110 [Mannheimia haemolytica PHL213]
gi|261308201|gb|EEY09496.1| hypothetical protein COI_1840 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311995|gb|EEY13136.1| hypothetical protein COK_0742 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 247
Score = 41.6 bits (96), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 29/150 (19%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK--------- 149
E MR Y + I+ +G P N E+ V D+ K
Sbjct: 106 ERMR-YAAYLHKETGLPILATGSSP------------NGTSEAKVMADEFKMFFNIETKW 152
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF--QHFGINTKASCSDYL 207
LE ++ T +NA FS +++ IILV++ +H+KR+++ F Q F + + + S
Sbjct: 153 LENKAKTTKENAIFSREILEKENIHKIILVTNQWHMKRAEMLFSQQGFEVMSASVGSGDT 212
Query: 208 NAYYSI-----IPLSANFYLTELALKEYIG 232
+Y + IP + LALKE+IG
Sbjct: 213 PDHYKLNFMHFIPQAGAMNSNMLALKEWIG 242
>gi|296135984|ref|YP_003643226.1| protein of unknown function DUF218 [Thiomonas intermedia K12]
gi|295796106|gb|ADG30896.1| protein of unknown function DUF218 [Thiomonas intermedia K12]
Length = 252
Score = 41.6 bits (96), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ F+ M LF+ + G + + + Q + SP G + V+L G PT
Sbjct: 44 VLFLLASMPLFANLALGALE-------RKATQEKICSP--PPPGALFVVLAGGIDSNPTH 94
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
S R+ ++L QH+ T++ISGG + E+ + ++ G
Sbjct: 95 AQDFSALKTASLKRLLAAVQL----AQHTPDSTLLISGG--WGRTIREANLMGALAVQLG 148
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ L+T S TFQ A I LV+SA H+ R+ + F H ++ A
Sbjct: 149 YPASRMILDTTSRTTFQTAVNMRERILQFPVGRRYLVTSADHMPRAMMAFAHERVSICAW 208
Query: 203 CSDY----LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
DY + A + P + T + E +G+L YYR
Sbjct: 209 PVDYEAIPIQALDMLNPQISALDKTTRVVHELLGML--YYR 247
>gi|229195925|ref|ZP_04322679.1| hypothetical protein bcere0001_14870 [Bacillus cereus m1293]
gi|228587567|gb|EEK45631.1| hypothetical protein bcere0001_14870 [Bacillus cereus m1293]
Length = 159
Score = 41.6 bits (96), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG NGT +PS+ RI + K+ ++ I+SGG
Sbjct: 6 EADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKAHEK----AIAIVSGG 50
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ N L++ + D I +E +S T +N +FS +I + K +I V++
Sbjct: 51 KGKGEDISEALAMKNGLMKLKIAEDRIIMEDRSTSTDENIKFSKPLIPDNMKKGMI-VTN 109
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 110 DFHMFRAK 117
>gi|78045951|ref|YP_362126.1| hypothetical protein XCV0395 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325929410|ref|ZP_08190538.1| hypothetical protein XPE_4644 [Xanthomonas perforans 91-118]
gi|78034381|emb|CAJ22026.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325540185|gb|EGD11799.1| hypothetical protein XPE_4644 [Xanthomonas perforans 91-118]
Length = 183
Score = 41.6 bits (96), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 12/139 (8%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
++I++LG R P F+ RI + LY ++ +GG
Sbjct: 26 ADVIIVLGAAAY------DARPSPVFEE--RIRHALDLYA----QGYAPRLLFTGGFGNG 73
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
AES V L G+ + I +ET S T QN + + ++++ I+VS H+
Sbjct: 74 ARFAESQVARRYALRHGIPPEAIVIETTSRTTRQNLEQARTLMERHGLHRAIIVSDPLHM 133
Query: 186 KRSQLYFQHFGINTKASCS 204
R+ Q GI+ AS +
Sbjct: 134 ARALRLSQELGIDALASST 152
>gi|253577135|ref|ZP_04854456.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843517|gb|EES71544.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 228
Score = 41.6 bits (96), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
EPS R+ ++++ YK+ K ++ G D E+ N L + GV R+
Sbjct: 80 EPSPGLRERLDQSLKDYKAGK---FQWFLLTGGLDTATSQYTEAEGMANYLEQHGVPREK 136
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ LE ++ T++N +FS ++K ++++V+ +H R+
Sbjct: 137 MLLENKATSTYENLKFSQEILKERGFTSVLIVTHTFHGNRA 177
>gi|329930883|ref|ZP_08284276.1| hypothetical protein HMPREF9412_5832 [Paenibacillus sp. HGF5]
gi|328934500|gb|EGG31008.1| hypothetical protein HMPREF9412_5832 [Paenibacillus sp. HGF5]
Length = 210
Score = 41.6 bits (96), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 8/153 (5%)
Query: 62 WKKDGNIIVLLGNGTTII-PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
WK G + + + ++ + + P FQ RI + + LY +I +G
Sbjct: 41 WKYAGRTVNIPSDAAIVLGAAVWEGKPSPVFQG--RIDQALWLY----DQQYVDKLIFTG 94
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + +AES ++ GV DI +ET S T QN ++ + + ++VS
Sbjct: 95 GRGSEDEVAESEAAKQYAIKHGVPERDILVETTSAITEQNLYYADKLGDAAGLSSYLIVS 154
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
H+KR+ + + G+ S + +AY S+
Sbjct: 155 DPLHMKRAMVMAEDMGLEANPSPASR-SAYQSV 186
>gi|320531184|ref|ZP_08032171.1| integral membrane protein with DUF218 domain protein [Actinomyces
sp. oral taxon 171 str. F0337]
gi|320136601|gb|EFW28562.1| integral membrane protein with DUF218 domain protein [Actinomyces
sp. oral taxon 171 str. F0337]
Length = 355
Score = 41.6 bits (96), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 56/122 (45%), Gaps = 15/122 (12%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQG 173
+++SGG ++E+ + + G+ I LE +S T N + ++ + M
Sbjct: 212 LVMSGGQGVDEPVSEARAMADYAIARGIPPKRILLEDRSTTTRTNISCTRDLLAERGMVD 271
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL-SANFYLTELALKEYIG 232
++LV+S++H R+ + G+ +++ P +A FY+ L+EY+
Sbjct: 272 PQVLLVTSSFHAVRTAILASDMGVP------------WAVAPARTAWFYIVNAWLREYVA 319
Query: 233 IL 234
+L
Sbjct: 320 VL 321
>gi|326796792|ref|YP_004314612.1| hypothetical protein Marme_3563 [Marinomonas mediterranea MMB-1]
gi|326547556|gb|ADZ92776.1| protein of unknown function DUF218 [Marinomonas mediterranea MMB-1]
Length = 255
Score = 41.6 bits (96), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 85/171 (49%), Gaps = 10/171 (5%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+++++LG+G +PA+ ++ + R+ E +R+ ++ + + +GG K
Sbjct: 79 DVVIVLGSGHNEYVNMPAV-MQLGRSAIFRLEEGLRILRANPSARLFVSGYGAGG---KT 134
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---IILVSSAY 183
AE + +E G+ I + DT A+ +S +K+ + + I LV+ A
Sbjct: 135 PHAE--ILKQAAIELGIAPTRIITFPLAKDTEDEARMMASFLKDDKERTNNRIALVTEAS 192
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL-SANFYLTELALKEYIGI 233
HLKR+ ++++ INT + + L A S + + +A Y ++ A E++G+
Sbjct: 193 HLKRAMRFYRNEDINTLPAPAFKLGASESDLRITAAAAYKSQRAFYEWLGL 243
>gi|54302669|ref|YP_132662.1| hypothetical protein PBPRB0990 [Photobacterium profundum SS9]
gi|46916093|emb|CAG22862.1| putative exported protein [Photobacterium profundum SS9]
Length = 366
Score = 41.6 bits (96), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I+++GG P+ H E + + L+E G++R I + + T +NA +SS + +
Sbjct: 232 IVLTGGVPKNHK-TEGKLMADWLVEKGIDRSRIIEDNYARSTVENALYSSYALARHDIDH 290
Query: 176 IILVSSAYHLKRSQLYFQ 193
++SSA H++R Q F+
Sbjct: 291 ATIISSASHVRRGQTLFE 308
>gi|229160681|ref|ZP_04288673.1| hypothetical protein bcere0009_14710 [Bacillus cereus R309803]
gi|228622696|gb|EEK79530.1| hypothetical protein bcere0009_14710 [Bacillus cereus R309803]
Length = 159
Score = 41.6 bits (96), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 63/126 (50%), Gaps = 13/126 (10%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+D + I++LG+ ++ + SYS + + + K H I+SGG
Sbjct: 5 EDADYIIVLGS-----------KVNGTKPSYSLQYRIDKAAEYLKLHE-KTIAIVSGGQG 52
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ ++E++ N L++ + D I +E +S T +N +FS +I + K +I V++ +
Sbjct: 53 KGEDISEALAMKNGLMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDF 111
Query: 184 HLKRSQ 189
H+ R++
Sbjct: 112 HMFRAK 117
>gi|319788557|ref|YP_004148032.1| hypothetical protein Psesu_2977 [Pseudoxanthomonas suwonensis 11-1]
gi|317467069|gb|ADV28801.1| protein of unknown function DUF218 [Pseudoxanthomonas suwonensis
11-1]
Length = 202
Score = 41.6 bits (96), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 12/141 (8%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ ++I++LG R P F+ RI + LY++ ++ +GG
Sbjct: 43 QRADVIIVLGAAAY------DARPSPVFEE--RIRHGLNLYRA----GYAPVLLFTGGYG 90
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
AES V + G+ + I +ET S T QN + +++ Q + I+VS
Sbjct: 91 TGARFAESQVAQRYAVRQGIPEEAILIETASRTTLQNLLQARELMRERQLHSAIIVSDPL 150
Query: 184 HLKRSQLYFQHFGINTKASCS 204
H+ R+ + GI S +
Sbjct: 151 HMSRALRLCRQLGIEATGSPT 171
>gi|297566663|ref|YP_003685635.1| hypothetical protein Mesil_2261 [Meiothermus silvanus DSM 9946]
gi|296851112|gb|ADH64127.1| protein of unknown function DUF218 [Meiothermus silvanus DSM 9946]
Length = 181
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ +RLY+ QH II++GG +E V L GV ++ ET+S
Sbjct: 54 GRLETALRLYR---QHRA-PGIIVTGGKQPGDRYSEGEVGCRYLKAQGVPPTALRCETES 109
Query: 155 LDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKA 201
T+QN + IK+ GK N+I+V+ HL R+ + GI +
Sbjct: 110 HSTWQNL----NNIKDTVGKQNVIVVTDEPHLPRALYLAESLGIKAQG 153
>gi|217960516|ref|YP_002339078.1| hypothetical protein BCAH187_A3129 [Bacillus cereus AH187]
gi|217066516|gb|ACJ80766.1| conserved hypothetical protein [Bacillus cereus AH187]
Length = 210
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 61 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKEED 116
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 117 ILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 174
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 175 TSAYKTLDTEIPFFFKEL 192
>gi|42519211|ref|NP_965141.1| hypothetical protein LJ1286 [Lactobacillus johnsonii NCC 533]
gi|41583499|gb|AAS09107.1| hypothetical protein LJ_1286 [Lactobacillus johnsonii NCC 533]
Length = 346
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 23/154 (14%)
Query: 64 KDGNIIVLLGNGTTIIPTIP--AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + +V+LG G P A RI + Y R + II+SGG
Sbjct: 172 KKLDYVVVLGAGLMGKKVTPLLAARINRGIEVYRR--------------NPGSKIIMSGG 217
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E++ E GV + DI +E +S T +N FS ++K +V++
Sbjct: 218 QGPGEEIPEAVAMAKYAEEKGVPKQDIIVEDKSKTTRENLIFSHKLMK--PDSRFAIVTN 275
Query: 182 AYHLKRS-----QLYFQHFGINTKASCSDYLNAY 210
+YH+ R+ +L Q G K LNA+
Sbjct: 276 SYHVYRALVLAKRLGLQCIGYGAKTKWYFTLNAF 309
>gi|257482212|ref|ZP_05636253.1| hypothetical protein PsyrptA_03022 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 141
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-- 208
E S T++NA ++++++ + K ++LV+ A+H++R++ F+ G ++ +L
Sbjct: 43 EGLSRTTWENATMTAAVLQPLGIKRVVLVTQAWHMQRARWSFEKAGFTVVSAPVGFLGVD 102
Query: 209 ---AYYSIIPLSANFYLTELALKEYIGILI 235
+ +P S F + + L E G+L+
Sbjct: 103 NARPFGGWLPESRVFTQSGVLLNEAAGLLV 132
>gi|269213925|ref|ZP_05983151.2| putative periplasmic protein [Neisseria cinerea ATCC 14685]
gi|269145137|gb|EEZ71555.1| putative periplasmic protein [Neisseria cinerea ATCC 14685]
Length = 181
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 6/119 (5%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+ + II +GG +K + E+ V L+ GV
Sbjct: 29 RPSPVFRE--RINHAIALYQGHRV----GKIIFTGGRSKKGYMTEAEVGRRYALKQGVPA 82
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+I E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 83 HNILFENTSRNTYENLNNIRPILQANGISSVVIVSDPYHLARAAEMAEDLGVRVYVSAT 141
>gi|160878990|ref|YP_001557958.1| hypothetical protein Cphy_0832 [Clostridium phytofermentans ISDg]
gi|160427656|gb|ABX41219.1| protein of unknown function DUF218 [Clostridium phytofermentans
ISDg]
Length = 251
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I SGG + E+ L+ GV+ + I LE S +T +N FS S I + ++
Sbjct: 137 ICSGGQGDGEDVTEAYAIKRGLIARGVKEERILLEEHSTNTVENLTFSQSFIDD-PNSSV 195
Query: 177 ILVSSAYHLKRSQ 189
++V+S +H R+
Sbjct: 196 VVVTSNFHTYRAS 208
>gi|52142423|ref|YP_084406.1| hypothetical protein BCZK2819 [Bacillus cereus E33L]
gi|206974549|ref|ZP_03235465.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|222096575|ref|YP_002530632.1| epih/gdmh-related protein [Bacillus cereus Q1]
gi|51975892|gb|AAU17442.1| conserved hypothetical protein [Bacillus cereus E33L]
gi|206747192|gb|EDZ58583.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|221240633|gb|ACM13343.1| EpiH/GdmH-related protein [Bacillus cereus Q1]
Length = 210
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 61 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKEED 116
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 117 ILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 174
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 175 TSAYKTLDTEIPFFFKEL 192
>gi|195953339|ref|YP_002121629.1| protein of unknown function DUF218 [Hydrogenobaculum sp. Y04AAS1]
gi|195932951|gb|ACG57651.1| protein of unknown function DUF218 [Hydrogenobaculum sp. Y04AAS1]
Length = 244
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNIILVSSAYHLKRSQLYFQHF 195
L + ++ +I + +S DT QNA S + +IILV+SAYH+ R+++ F F
Sbjct: 133 LINAIDIGNIYEDVKSKDTMQNAAQSYKVCTRYITPDCNSIILVTSAYHMPRAKMLFDRF 192
Query: 196 GINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGIL 234
N DY S +P ++ + A++EY+GIL
Sbjct: 193 FKNVIPYPVDYKEDLRYNVRSFLPNMSDLENSTKAIREYLGIL 235
>gi|229156674|ref|ZP_04284762.1| hypothetical protein bcere0010_28590 [Bacillus cereus ATCC 4342]
gi|228626843|gb|EEK83582.1| hypothetical protein bcere0010_28590 [Bacillus cereus ATCC 4342]
Length = 219
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 70 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKEED 125
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 126 ILIETKSLFTEENLKNAKEVGVENGIRTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 183
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 184 TSAYKTLDTEIPFFFKEL 201
>gi|228900299|ref|ZP_04064529.1| hypothetical protein bthur0014_15050 [Bacillus thuringiensis IBL
4222]
gi|228859334|gb|EEN03764.1| hypothetical protein bthur0014_15050 [Bacillus thuringiensis IBL
4222]
Length = 172
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 19 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----TIAIVSGG 63
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ L++ + D I +E +S T +N FS +I K +I V++
Sbjct: 64 QGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTN 122
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 123 DFHMFRAK 130
>gi|300362750|ref|ZP_07058925.1| integral membrane protein [Lactobacillus gasseri JV-V03]
gi|300353178|gb|EFJ69051.1| integral membrane protein [Lactobacillus gasseri JV-V03]
Length = 373
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 18/125 (14%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGK 174
+I+SGG + L+E+ + ++ G + D I LE +S +T+QN +S ++ IK+ +
Sbjct: 228 LIMSGGQGKDEDLSEAEAMKDYAVKRGYDPDLILLEDKSTNTYQNMVYSKAVAIKDYGNE 287
Query: 175 --NIILVSSAYHLKRSQLY--FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ ++ YHL R+ LY H N + + + ++L ++E+
Sbjct: 288 KFKVKFFTNNYHLFRAGLYAKMAHLKANGIGATTRF-------------YFLPNATIREF 334
Query: 231 IGILI 235
G+ I
Sbjct: 335 AGVFI 339
>gi|47564233|ref|ZP_00235278.1| EpiH/GdmH-related protein [Bacillus cereus G9241]
gi|47558385|gb|EAL16708.1| EpiH/GdmH-related protein [Bacillus cereus G9241]
Length = 210
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 61 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKEED 116
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 117 ILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 174
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 175 TSAYKTLDTEIPFFFKEL 192
>gi|253688162|ref|YP_003017352.1| hypothetical protein PC1_1775 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754740|gb|ACT12816.1| protein of unknown function DUF218 [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 282
Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 15/189 (7%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+PQ K I+VL G T P+ + S R+ E +RLY + + +I
Sbjct: 76 APQANKVDYIVVLGGGYTYNAEWAPSSNL--ISNSLPRVTEGIRLYHA----NPGAKLIF 129
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+GG Q + ++ + G+ + DI + DT + A ++ ++ + + +L
Sbjct: 130 TGGAAQGNPVSSAKTAALVAESLGIPQQDIVILDTPRDTEEEAAATAKIVGD---RPFLL 186
Query: 179 VSSAYHLKRSQLYFQHFGI------NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
V+SA HL R+ +FQ G+ + + + LN + + P + +E A E +G
Sbjct: 187 VTSANHLPRAIRFFQAQGLAPIPAPANQMAITSALNPWEKVFPSAYYLSHSERAWYETLG 246
Query: 233 ILIAYYRGN 241
L +G
Sbjct: 247 RLWQALKGT 255
>gi|229173740|ref|ZP_04301282.1| hypothetical protein bcere0006_28400 [Bacillus cereus MM3]
gi|228609839|gb|EEK67119.1| hypothetical protein bcere0006_28400 [Bacillus cereus MM3]
Length = 219
Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 70 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKEED 125
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 126 ILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 183
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 184 TSAYKTLDTEIPFFFKEL 201
>gi|229139714|ref|ZP_04268284.1| hypothetical protein bcere0013_28240 [Bacillus cereus BDRD-ST26]
gi|228643845|gb|EEL00107.1| hypothetical protein bcere0013_28240 [Bacillus cereus BDRD-ST26]
Length = 219
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 70 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKEED 125
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 126 ILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 183
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 184 TSAYKTLDTEIPFFFKEL 201
>gi|110802817|ref|YP_698118.1| hypothetical protein CPR_0793 [Clostridium perfringens SM101]
gi|110683318|gb|ABG86688.1| conserved hypothetical protein [Clostridium perfringens SM101]
Length = 206
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 16/125 (12%)
Query: 102 RLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL + K +H +I+SGG + ES + G+ + I E +S TFQ
Sbjct: 66 RLEEGLKYLKLHPNTKVIVSGGQGSNEPIPESEAMKIFFVNKGINPNRIIEEDKSKSTFQ 125
Query: 160 NAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
N +FS +++ +++V+S +HL R++ +DYLN +P
Sbjct: 126 NLEFSKKILEERHANKDEVLIVTSDFHLFRAK------------EIADYLNIKNEGLPSK 173
Query: 218 ANFYL 222
+L
Sbjct: 174 TPIFL 178
>gi|261212701|ref|ZP_05926985.1| hypothetical protein VCJ_002977 [Vibrio sp. RC341]
gi|260837766|gb|EEX64443.1| hypothetical protein VCJ_002977 [Vibrio sp. RC341]
Length = 335
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
II++GG PQ H E + + L+E V I E + T NA FSS +
Sbjct: 199 AVIILTGGVPQNHK-TEGKLMADWLVEHDVSATRIIEENYATSTVDNALFSSYALARHGI 257
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
K+ ++SSA H++R Q F+ T + Y PLS
Sbjct: 258 KHATIISSASHVRRGQTLFEIASWQTGPRGITFDTVSYPDKPLS 301
>gi|251793524|ref|YP_003008253.1| transporter [Aggregatibacter aphrophilus NJ8700]
gi|247534920|gb|ACS98166.1| transporter [Aggregatibacter aphrophilus NJ8700]
Length = 363
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 102 RLYKSCK--QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL K+ + + H II++GG PQ + E + L++ G++ I + + T +
Sbjct: 214 RLEKTLEIANQNPHALIIVTGGVPQNNQ-TEGALMKQWLIDKGIDAKRIYADNYARSTVE 272
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
NA FS + K+ +L+SS H++R + F+
Sbjct: 273 NALFSRYSLAKHHIKHAVLISSGSHVRRGRALFE 306
>gi|222084312|ref|YP_002542841.1| hypothetical protein Arad_0152 [Agrobacterium radiobacter K84]
gi|221721760|gb|ACM24916.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 263
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 8/153 (5%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ E +RL + Q + + G ++++ G+ +D + + S
Sbjct: 106 DRLIEALRLAQKYPQARIVVSGGDGSIGGDYEG--DAVISERFFTALGIGKDRLVEDKTS 163
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
TF+NA + ++ +L++S +H+ RS F+ GI+ DY + +
Sbjct: 164 RTTFENAVNTKELLAQNGLSGCLLITSGFHMPRSMGIFRKQGIDVVPWPVDYRSTGKETL 223
Query: 215 PL-----SANFYLTELALKEYIGILIAYYRGNR 242
L S N L ++E+IG L+ YY R
Sbjct: 224 GLDFTQPSLNAQLLSTGVREWIG-LVGYYAVGR 255
>gi|307105797|gb|EFN54045.1| hypothetical protein CHLNCDRAFT_136117 [Chlorella variabilis]
Length = 363
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 114 CTIIISGG---------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
C I++ G D + + L ES Y L+ GV D+ ETQS DT N FS
Sbjct: 157 CPIVLLGAATPHKPPVMDDRGYVLYESTAYAAYLMGRGVPAGDLLKETQSCDTVGNGYFS 216
Query: 165 SSMIKNMQG-KNIILVSSAYHLKRSQLYFQ 193
G + I +V+S +H+ R+Q F
Sbjct: 217 LLQHALPAGWRRIAVVTSEFHMPRTQATFD 246
>gi|228938827|ref|ZP_04101427.1| hypothetical protein bthur0008_14880 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228971708|ref|ZP_04132329.1| hypothetical protein bthur0003_14850 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228978317|ref|ZP_04138694.1| hypothetical protein bthur0002_15210 [Bacillus thuringiensis Bt407]
gi|228781334|gb|EEM29535.1| hypothetical protein bthur0002_15210 [Bacillus thuringiensis Bt407]
gi|228787798|gb|EEM35756.1| hypothetical protein bthur0003_14850 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228820676|gb|EEM66701.1| hypothetical protein bthur0008_14880 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 194
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 19/129 (14%)
Query: 64 KDGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D I++LG NGT +PS+ RI + KS ++ I+SG
Sbjct: 40 EDAEYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----TIAIVSG 84
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ L++ + D I +E +S T +N FS +I K +I V+
Sbjct: 85 GQGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VT 143
Query: 181 SAYHLKRSQ 189
+ +H+ R++
Sbjct: 144 NDFHMFRAK 152
>gi|293400746|ref|ZP_06644891.1| putative periplasmic protein [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305772|gb|EFE47016.1| putative periplasmic protein [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 189
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 67 NIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
++ ++LG N + T+ R+E + Y +K C H ++ISG
Sbjct: 35 DVAIVLGYPCNADGSLSTVQKKRMETAINLY---------HKHCVHH-----LLISGSCV 80
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
Q + E+ L + + I LET++ +T++N +++ + Q +NII+++S
Sbjct: 81 Q-NTYIEAEKMAAYALTQKIPKQAIVLETKARNTYENLKYAKCICDENQWENIIVITSPS 139
Query: 184 HLKRSQLYFQHFGIN 198
H++R+ + F N
Sbjct: 140 HMRRAAFFVHKFFRN 154
>gi|125624693|ref|YP_001033176.1| hypothetical protein llmg_1911 [Lactococcus lactis subsp. cremoris
MG1363]
gi|124493501|emb|CAL98480.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
Length = 361
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 14/145 (9%)
Query: 102 RLYKSCKQHSMHCTIII-SGGDPQKHGLAESIV---YNNKLLESGVERDDIKLETQSLDT 157
R+ + K + TI++ SGG ++E+ Y ++L +ER LE QS T
Sbjct: 207 RILAAVKAVRDNETILVFSGGQGPDEKISEARAMQKYAVEVLGFPIERT--MLEDQSRTT 264
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
++N FSS +IK + + +S YH+ R+ L+ I+ + YY +
Sbjct: 265 YENLVFSSRLIK----EKFMFFTSDYHVFRAALFAATLKIDAQGGKGGKTAMYYRVPAFI 320
Query: 218 ANFYLTELALK----EYIGILIAYY 238
F K +++GI++A++
Sbjct: 321 REFIAVMNYEKRKHIKWVGIIVAFF 345
>gi|325673388|ref|ZP_08153079.1| transporter [Rhodococcus equi ATCC 33707]
gi|325555409|gb|EGD25080.1| transporter [Rhodococcus equi ATCC 33707]
Length = 199
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 102 RLYKSCKQHSMHCT--IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL + +H +I+SGG Q E+ L+ GV +I L+ S T
Sbjct: 90 RLNTAAAIARLHPANKVIVSGGPTQPLPYTEAQAMLAGLVLRGVNPANIVLDNDSFSTVD 149
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
NA+ ++ ++ +LV+SA H+ R+ FQ
Sbjct: 150 NARNTTQILSAAGADGAVLVTSASHIDRALATFQ 183
>gi|300071488|gb|ADJ60888.1| hypothetical protein LLNZ_09840 [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 361
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 14/145 (9%)
Query: 102 RLYKSCKQHSMHCTIII-SGGDPQKHGLAESIV---YNNKLLESGVERDDIKLETQSLDT 157
R+ + K + TI++ SGG ++E+ Y ++L +ER LE QS T
Sbjct: 207 RILAAVKAVRDNETILVFSGGQGPDEKISEARAMQKYAVEVLGFPIERT--MLEDQSRTT 264
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
++N FSS +IK + + +S YH+ R+ L+ I+ + YY +
Sbjct: 265 YENLVFSSRLIK----EKFMFFTSDYHVFRAALFAATLKIDAQGGKGGKTAMYYRVPAFI 320
Query: 218 ANFYLTELALK----EYIGILIAYY 238
F K +++GI++A++
Sbjct: 321 REFIAVMNYEKRKHIKWVGIIVAFF 345
>gi|255505150|ref|ZP_05344767.3| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
gi|255269303|gb|EET62508.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
Length = 222
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
ES L+E GV R + E Q+ T++NA +++ +++ + +LV A+H +RS
Sbjct: 105 ESDFLTAVLVERGVPRSAVLQEKQATYTYENAIYTAKLLEGRTIRRALLVCQAFHARRSL 164
Query: 190 LYFQ 193
LY++
Sbjct: 165 LYYK 168
>gi|260438932|ref|ZP_05792748.1| putative membrane protein [Butyrivibrio crossotus DSM 2876]
gi|292808583|gb|EFF67788.1| putative membrane protein [Butyrivibrio crossotus DSM 2876]
Length = 258
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 102 RLYKSCK--QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL K+ + + + + +++SGG ++E+ + L++ GV++ + LE +S T +
Sbjct: 124 RLDKAFEYIEKNDNTILVLSGGQGNGEDVSEAQAMYDYLVQKGVDKSRLLLEDKSTSTVE 183
Query: 160 NAQFSSSMI-KNMQGKNIIL--VSSAYHLKRSQLYFQHFGINTKA 201
N ++S +I KN Q + + +++ +H+ R++L ++ G + K
Sbjct: 184 NIEYSMKIIEKNSQNATVEVGFITNNFHVFRAELVCRNMGYDIKG 228
>gi|206969158|ref|ZP_03230113.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|206736199|gb|EDZ53357.1| conserved hypothetical protein [Bacillus cereus AH1134]
Length = 210
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 61 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKEED 116
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 117 ILIETKSLFTEENLKNAKQVGIENGIRTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 174
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 175 TSAYKTLDTEIPFFFKEL 192
>gi|313636439|gb|EFS02193.1| conserved hypothetical protein [Listeria seeligeri FSL S4-171]
Length = 189
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
++++SGG + E+ V L+ G+ R+ I+ ET+S T +N S+S K G
Sbjct: 76 VSVVVSGGKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRTEEN--ISNSNEKFELG 133
Query: 174 KNIILVSSAYHLKRSQLYFQHFGIN 198
K +I V+S YH+ R+ + + I+
Sbjct: 134 KTVI-VTSDYHMYRALMLAERQNID 157
>gi|224541362|ref|ZP_03681901.1| hypothetical protein CATMIT_00522 [Catenibacterium mitsuokai DSM
15897]
gi|224525696|gb|EEF94801.1| hypothetical protein CATMIT_00522 [Catenibacterium mitsuokai DSM
15897]
Length = 345
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K+ + I++LG G I ++ P S RI + + + K + +I+SGG
Sbjct: 173 KRKLDYIIVLGAG------IKGEQVTPLLAS--RIDKGIEILKKNPK----ALLIMSGGQ 220
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ + E + G++ I +E +S +T +N FSS ++ + + LV+++
Sbjct: 221 GKGEDIPEGEAMARYAINKGIDESKILIENKSTNTKENLLFSSKLMTK-ESPRVGLVTTS 279
Query: 183 YHLKRSQLYFQHFGIN 198
YH+ R+ + ++ GI
Sbjct: 280 YHVFRALILAKNLGIR 295
>gi|326939331|gb|AEA15227.1| putative cytoplasmic protein [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 192
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 19/129 (14%)
Query: 64 KDGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D I++LG NGT +PS+ RI + KS ++ I+SG
Sbjct: 38 EDAEYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----TIAIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ L++ + D I +E +S T +N FS +I K +I V+
Sbjct: 83 GQGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VT 141
Query: 181 SAYHLKRSQ 189
+ +H+ R++
Sbjct: 142 NDFHMFRAK 150
>gi|167750336|ref|ZP_02422463.1| hypothetical protein EUBSIR_01310 [Eubacterium siraeum DSM 15702]
gi|167656696|gb|EDS00826.1| hypothetical protein EUBSIR_01310 [Eubacterium siraeum DSM 15702]
Length = 234
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Query: 102 RLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL +C S I+SGG ++E+ L+ G+ I E +S T++
Sbjct: 103 RLDAACSYLSTDTKADCIVSGGKGDNEHISEAEAMYEALVNDGISESRISKEDKSSSTYE 162
Query: 160 NAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
N FS ++++ GK I +V+ +H R++L + G + K C +Y ++P+
Sbjct: 163 NLLFSKQILED-SGKPLRIAIVTDGFHQWRARLQAESLGYDVK--CVSAATPWY-LVPV 217
>gi|320093548|ref|ZP_08025440.1| protein of hypothetical function DUF218 [Actinomyces sp. oral taxon
178 str. F0338]
gi|319979504|gb|EFW10974.1| protein of hypothetical function DUF218 [Actinomyces sp. oral taxon
178 str. F0338]
Length = 338
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
EP+ RI +RL+ + ++ SGG ++E+ + L +GV +
Sbjct: 170 EPTPLLRGRIETAIRLWD---RQGRRAVLVPSGGQGPDEVVSEAEAMHRFLRTNGVGEES 226
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFGIN 198
I E +S T +N F+ +I+ Q +V+S YH+ R+ Y + GI
Sbjct: 227 ILDEDRSTTTMENLVFAKQLIEERQRGFPYRCAMVTSDYHVFRTATYARAAGIR 280
>gi|315039245|ref|YP_004032813.1| hypothetical protein LA2_10585 [Lactobacillus amylovorus GRL 1112]
gi|312277378|gb|ADQ60018.1| hypothetical protein LA2_10585 [Lactobacillus amylovorus GRL 1112]
Length = 367
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 27/186 (14%)
Query: 60 PQWKKDGNIIVL---LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P+ K +IVL L NG + + A RI + Q +R ++ R I
Sbjct: 173 PRHYKQDYLIVLGAGLLNGDQVSKLLAA-RINRAIQFSNRQYQKGR---------KRPII 222
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK---NMQG 173
I+SGG + E++ GV D I +E QS +T+QN FS + +
Sbjct: 223 IMSGGQGPDEKIPEALAMARFAQHRGVPTDQILIEDQSKNTYQNMLFSKRIATQDFDSDK 282
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
S+ YH+ R+ L + G+ + + +YL ++E+ G+
Sbjct: 283 FRATFFSNNYHIFRAALLAKEVGLKANGVGA-----------FTRLYYLPNAIIREFAGV 331
Query: 234 LIAYYR 239
+ + R
Sbjct: 332 FVMHKR 337
>gi|312139306|ref|YP_004006642.1| hypothetical protein REQ_18910 [Rhodococcus equi 103S]
gi|311888645|emb|CBH47957.1| putative secreted protein [Rhodococcus equi 103S]
Length = 206
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 102 RLYKSCKQHSMHCT--IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL + +H +I+SGG Q E+ L+ GV +I L+ S T
Sbjct: 97 RLNTAAAIARLHPANKVIVSGGPTQPLPYTEAQAMLAGLVLRGVNPANIVLDNDSFSTVD 156
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
NA+ ++ ++ +LV+SA H+ R+ FQ
Sbjct: 157 NARNTTQILSAAGADGAVLVTSASHIDRALATFQ 190
>gi|228986175|ref|ZP_04146317.1| hypothetical protein bthur0001_28620 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228773556|gb|EEM21980.1| hypothetical protein bthur0001_28620 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 219
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 70 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKEED 125
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 126 ILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 183
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 184 TSAYKTLDTEIPFFFKEL 201
>gi|291556404|emb|CBL33521.1| Uncharacterized conserved protein [Eubacterium siraeum V10Sc8a]
Length = 262
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 102 RLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL +C S I+SGG ++E+ L+ G+ I E +S T++
Sbjct: 131 RLDAACSYLSTDTKADCIVSGGKGDNEHISEAEAMYEALVNDGISESRITKEDKSSSTYE 190
Query: 160 NAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
N FS ++++ + I +V+ +H R++L + G + K C +Y ++P+
Sbjct: 191 NLLFSKQILEDSEKPLRIAIVTDGFHQWRARLQAESLGYDVK--CVSAATPWY-LVPV 245
>gi|329930832|ref|ZP_08284231.1| hypothetical protein HMPREF9412_4101 [Paenibacillus sp. HGF5]
gi|328934534|gb|EGG31039.1| hypothetical protein HMPREF9412_4101 [Paenibacillus sp. HGF5]
Length = 217
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 115 TIIISGG-DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
T I++GG D ++ E+ N L+E+GV + I LE ++ T++N +S ++++
Sbjct: 93 TFIVTGGLDKPEYNYTEAEGMRNFLVEAGVPEERIFLENEATSTYENLLYSQAIMEEHGW 152
Query: 174 KNIILVSSAYHLKRS 188
I+V+ YH R+
Sbjct: 153 NTAIIVTHDYHGTRA 167
>gi|312881337|ref|ZP_07741134.1| hypothetical protein VIBC2010_16004 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370977|gb|EFP98432.1| hypothetical protein VIBC2010_16004 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 365
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+D IV LG ++ I IE R+ T++L K + II++GG P
Sbjct: 190 EDRGAIVTLGYALNPDGSMHEILIE-------RLMTTLKLAK----ENPDALIILTGGVP 238
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
K+ E + + L+ G+ + I E + T NA FSS + + K+ ++SSA
Sbjct: 239 -KNNKTEGKLMADWLVGKGINPNRIIEENYATSTVGNALFSSYALARHKIKHATIISSAS 297
Query: 184 HLKRSQLYFQ 193
H++R Q F+
Sbjct: 298 HVRRGQTLFE 307
>gi|313632066|gb|EFR99164.1| conserved hypothetical protein [Listeria seeligeri FSL N1-067]
Length = 189
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
++++SGG + E+ V L+ G+ R+ I+ ET+S T +N S+S K G
Sbjct: 76 VSVVVSGGKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRTEEN--ISNSNEKFELG 133
Query: 174 KNIILVSSAYHLKRSQLYFQHFGIN 198
K +I V+S YH+ R+ + + I+
Sbjct: 134 KTVI-VTSDYHMYRALMLAERQNID 157
>gi|322807132|emb|CBZ04706.1| hypothetical protein H04402_02902 [Clostridium botulinum H04402
065]
Length = 351
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 25/187 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P+ KK IIVL G+G + R+ P S RI + + +YK + II +
Sbjct: 159 PKRKKYDYIIVL-GSG------LIGDRVPPLLAS--RIDKGIEIYKRQLKKGNPSKIIFT 209
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-----MQGK 174
G ++E + + G+ + + +E Q+++T++N S +++ +
Sbjct: 210 GAKGADEKISEGLAMWKYAKDKGIPTEHMIIEDQAVNTYENLYNSKKLLEEDYKAREKEY 269
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+V++ +HL RS ++ + G+ + S Y+S+ L ++EYIG++
Sbjct: 270 RCTVVTNNFHLFRSLIWARIVGLECDGAGSK-TKLYFSLNAL----------IREYIGVM 318
Query: 235 IAYYRGN 241
Y + N
Sbjct: 319 YIYKKIN 325
>gi|289435703|ref|YP_003465575.1| hypothetical protein lse_2342 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171947|emb|CBH28493.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 189
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
++++SGG + E+ V L+ G+ R+ I+ ET+S T +N S+S K G
Sbjct: 76 VSVVVSGGKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRTEEN--ISNSNEKFELG 133
Query: 174 KNIILVSSAYHLKRSQLYFQHFGIN 198
K +I V+S YH+ R+ + + I+
Sbjct: 134 KTVI-VTSDYHMYRALMLAERQNID 157
>gi|227827121|ref|YP_002828900.1| hypothetical protein M1425_0793 [Sulfolobus islandicus M.14.25]
gi|229584289|ref|YP_002842790.1| hypothetical protein M1627_0798 [Sulfolobus islandicus M.16.27]
gi|227458916|gb|ACP37602.1| protein of unknown function DUF218 [Sulfolobus islandicus M.14.25]
gi|228019338|gb|ACP54745.1| protein of unknown function DUF218 [Sulfolobus islandicus M.16.27]
Length = 180
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER-DDIKLE 151
S RI E +RLYK + +II GG E + K + S ++ +++ ++
Sbjct: 14 SEGRIDEAIRLYK----QGIAKYLIIVGG-------KEEVSEMYKKVRSKIQNIENVYVD 62
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
SL T NA ++ +I+ + K+I++V+S +H+KR+ F+ F
Sbjct: 63 NNSLSTADNAYYAKKIIEKLNIKSILIVTSNFHIKRALKTFELF 106
>gi|66803372|ref|XP_635529.1| hypothetical protein DDB_G0290785 [Dictyostelium discoideum AX4]
gi|60463854|gb|EAL62026.1| hypothetical protein DDB_G0290785 [Dictyostelium discoideum AX4]
Length = 516
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 116 IIISG------GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+I+SG DP K +E+ N L++ V DI +E S +T +NA+F+ + ++
Sbjct: 143 LILSGKGKEEQSDPDKAFNSEAEAMNEIALQNDVSPFDILIENNSSNTAENARFTLNYLQ 202
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQ 193
+ + + +V+S +H+ RSQ FQ
Sbjct: 203 KIGVQRLFIVTSDFHVLRSQYIFQ 226
>gi|330814246|ref|YP_004358485.1| protein of unknown function DUF218 [Candidatus Pelagibacter sp.
IMCC9063]
gi|327487341|gb|AEA81746.1| protein of unknown function DUF218 [Candidatus Pelagibacter sp.
IMCC9063]
Length = 247
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
S +E+ DI + +T +N + + N + K ++LV+SA+H+KRS + + + I +
Sbjct: 140 SNIEKKDIIFLPSARNTIENFKQLKFFLTNKKNKKVLLVTSAFHMKRSLMIAKKYDIKIQ 199
Query: 201 A------SCSDY---LNAYYSIIPLSANFYLTELALKEYIGILIA 236
SDY +N+Y + + + N Y ++ +E +GI +
Sbjct: 200 GFPSFFYISSDYSSLINSYQN-LRIQNNLYYFDIFFRELVGIFLV 243
>gi|228920427|ref|ZP_04083772.1| hypothetical protein bthur0011_14410 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228839057|gb|EEM84353.1| hypothetical protein bthur0011_14410 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 194
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 41 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----TIAIVSGG 85
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ L++ + D I +E +S T +N FS +I K +I V++
Sbjct: 86 QGKGEDISEALAMKQGLIKQNIVEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTN 144
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 145 DFHMFRAK 152
>gi|329667272|gb|AEB93220.1| hypothetical protein LJP_0894 [Lactobacillus johnsonii DPC 6026]
Length = 346
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 23/154 (14%)
Query: 64 KDGNIIVLLGNGTTIIPTIP--AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + +V+LG G P A RI + Y R + II+SGG
Sbjct: 172 KKLDYVVVLGAGLMGKKVTPLLAARINRGIEVYRR--------------NPGSKIIMSGG 217
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E++ E G+ + DI +E +S T +N FS ++K +V++
Sbjct: 218 QGPGEEIPEAVAMAKYAEEKGISKQDIIVEDKSKTTRENLIFSHRLMK--PDSRFAIVTN 275
Query: 182 AYHLKRS-----QLYFQHFGINTKASCSDYLNAY 210
+YH+ R+ +L Q G K LNA+
Sbjct: 276 SYHVYRALVLAKRLGLQCIGYGAKTKWYFTLNAF 309
>gi|291517930|emb|CBK73151.1| Uncharacterized conserved protein [Butyrivibrio fibrisolvens 16/4]
Length = 245
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 12/120 (10%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I++GG ++E LL G+ +D I +E S+DT +N + S+I
Sbjct: 133 VIVTGGQGANESISEGEGGQEYLLSQGINKDRILVEKDSVDTDENISNALSLIDTDNDMK 192
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF-YLTELALKEYIGIL 234
I +V++ +H+ R + + Y NA S I + YL ++E GIL
Sbjct: 193 ICIVTNNFHVFRGVMIAKR-----------YTNAQISGIAAFTQYQYLPNNMVRETFGIL 241
>gi|293376843|ref|ZP_06623062.1| conserved domain protein [Turicibacter sanguinis PC909]
gi|325837249|ref|ZP_08166327.1| hypothetical protein HMPREF9402_2581 [Turicibacter sp. HGF1]
gi|292644537|gb|EFF62628.1| conserved domain protein [Turicibacter sanguinis PC909]
gi|325491023|gb|EGC93318.1| hypothetical protein HMPREF9402_2581 [Turicibacter sp. HGF1]
Length = 184
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+I++GG+ L E+ + N L+E G+ D I +E + +TF+N F +IK +
Sbjct: 69 VIVTGGNGTDLKLPEAHIMKNVLIEEFGISEDRIIVEDLARNTFENLLFCKPLIKE---E 125
Query: 175 NIILVSSAYHLKRSQLYFQHFGIN 198
+ +V+S +H R++L +N
Sbjct: 126 RVAIVTSEFHSIRTRLLAHRLHLN 149
>gi|324327048|gb|ADY22308.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 210
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 61 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKEED 116
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 117 ILIETKSLFTEENLKNAKEVGIENGIQTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 174
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 175 TSAYKTLDTEIPFFFKEL 192
>gi|197284617|ref|YP_002150489.1| hypothetical protein PMI0723 [Proteus mirabilis HI4320]
gi|227356800|ref|ZP_03841185.1| integral membrane protein [Proteus mirabilis ATCC 29906]
gi|194682104|emb|CAR41690.1| putative membrane protein [Proteus mirabilis HI4320]
gi|227163090|gb|EEI48025.1| integral membrane protein [Proteus mirabilis ATCC 29906]
Length = 276
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 100/236 (42%), Gaps = 25/236 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKK 64
I L + W +S+ ++ ++L + +G + LL + +YQ R L +
Sbjct: 28 ILLWFTRWQKTGKSV-----LTIVIVLLTLLGMQPVADTLLMPSEKAYQARYELRENSPQ 82
Query: 65 DGNIIVLLGNGTTIIPT-IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
D N IV+LG G T P P+ + S R+ E +RLY S+ I G
Sbjct: 83 DVNYIVVLGGGFTYNPEWAPSANL--LNNSLFRVAEGVRLYYRYPNASL---IFTGGAGV 137
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVSSA 182
K AE + L GV + +Q DT + A +I GK +LV+SA
Sbjct: 138 NKISSAEVAAQVAQSL--GVPAEKTIALSQPKDTEEEAYEVDKLI----GKQPFLLVTSA 191
Query: 183 YHLKRSQLYFQHFGIN------TKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
HL R++ +F G++ + + + L+ + P + F +E A E+IG
Sbjct: 192 NHLARAERFFLARGMHPIVAPANQLAITTPLHPWEKYTPSAYYFQHSERAWYEFIG 247
>gi|229197269|ref|ZP_04324000.1| hypothetical protein bcere0001_28180 [Bacillus cereus m1293]
gi|228586228|gb|EEK44315.1| hypothetical protein bcere0001_28180 [Bacillus cereus m1293]
Length = 219
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 70 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKDED 125
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 126 ILIETKSLFTEENLKNAKEVGVENGIRTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 183
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 184 TSAYKTLDTEIPFFFKEL 201
>gi|228921749|ref|ZP_04085066.1| hypothetical protein bthur0011_27460 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228953412|ref|ZP_04115458.1| hypothetical protein bthur0006_27920 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229070559|ref|ZP_04203799.1| hypothetical protein bcere0025_27430 [Bacillus cereus F65185]
gi|229080263|ref|ZP_04212790.1| hypothetical protein bcere0023_29110 [Bacillus cereus Rock4-2]
gi|229179370|ref|ZP_04306724.1| hypothetical protein bcere0005_27200 [Bacillus cereus 172560W]
gi|229191184|ref|ZP_04318173.1| hypothetical protein bcere0002_28480 [Bacillus cereus ATCC 10876]
gi|228592334|gb|EEK50164.1| hypothetical protein bcere0002_28480 [Bacillus cereus ATCC 10876]
gi|228604268|gb|EEK61735.1| hypothetical protein bcere0005_27200 [Bacillus cereus 172560W]
gi|228703158|gb|EEL55617.1| hypothetical protein bcere0023_29110 [Bacillus cereus Rock4-2]
gi|228712574|gb|EEL64509.1| hypothetical protein bcere0025_27430 [Bacillus cereus F65185]
gi|228806309|gb|EEM52882.1| hypothetical protein bthur0006_27920 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228837961|gb|EEM83285.1| hypothetical protein bthur0011_27460 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 219
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 70 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKEED 125
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 126 ILIETKSLFTEENLKNAKQVGIENGIRTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 183
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 184 TSAYKTLDTEIPFFFKEL 201
>gi|229096200|ref|ZP_04227173.1| hypothetical protein bcere0020_14480 [Bacillus cereus Rock3-29]
gi|229102312|ref|ZP_04233021.1| hypothetical protein bcere0019_14730 [Bacillus cereus Rock3-28]
gi|229115155|ref|ZP_04244565.1| hypothetical protein bcere0017_14500 [Bacillus cereus Rock1-3]
gi|228668295|gb|EEL23727.1| hypothetical protein bcere0017_14500 [Bacillus cereus Rock1-3]
gi|228681213|gb|EEL35381.1| hypothetical protein bcere0019_14730 [Bacillus cereus Rock3-28]
gi|228687160|gb|EEL41065.1| hypothetical protein bcere0020_14480 [Bacillus cereus Rock3-29]
Length = 159
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 21/129 (16%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NGT +PS+ RI + KS ++ I+SGG
Sbjct: 6 DADYIIVLGSKVNGT-----------KPSYSLQYRIDKAAEYLKSHEK----TIAIVSGG 50
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNIILVS 180
+ ++E++ L++ + D I +E +S T +N FS +I NM K ++V+
Sbjct: 51 QGKGEDISEALAMKQGLMKQNIAEDRIIMEDKSTSTDENITFSKPLIPANM--KKGMIVT 108
Query: 181 SAYHLKRSQ 189
+ +H+ R++
Sbjct: 109 NDFHMFRAK 117
>gi|217963458|ref|YP_002349136.1| hypothetical protein LMHCC_0160 [Listeria monocytogenes HCC23]
gi|217332728|gb|ACK38522.1| conserved hypothetical protein [Listeria monocytogenes HCC23]
gi|307571968|emb|CAR85147.1| conserved domain protein [Listeria monocytogenes L99]
Length = 189
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+++SGG + +E+ V L+ G+ R IK+E +S T +N ++S K GK
Sbjct: 78 VVVSGGQGEDESASEASVMEEYLVNKGITRSRIKIEDKSRRTEENIKYSKE--KFNLGKT 135
Query: 176 IILVSSAYHLKRS 188
+I V+S YH+ R+
Sbjct: 136 VI-VTSDYHMYRA 147
>gi|117618144|ref|YP_857439.1| transporter [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559551|gb|ABK36499.1| transporter [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 320
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
ET R ++ II++GG PQ E + + L++ G++R I E + T
Sbjct: 171 LETTRALAKANPAAL---IILTGGVPQNR-QTEGKLMADWLVKKGIDRSRIIEENYATST 226
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+NA +S + Q + LVSSA H++R Q +
Sbjct: 227 VENALYSGYALARHQIEYATLVSSASHVRRGQTLLE 262
>gi|229030771|ref|ZP_04186797.1| hypothetical protein bcere0028_28350 [Bacillus cereus AH1271]
gi|228730533|gb|EEL81487.1| hypothetical protein bcere0028_28350 [Bacillus cereus AH1271]
Length = 219
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 70 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKDED 125
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 126 ILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 183
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 184 TSAYKTLDTEIPFFFKEL 201
>gi|288574503|ref|ZP_06392860.1| protein of unknown function DUF218 [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570244|gb|EFC91801.1| protein of unknown function DUF218 [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 270
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 25/154 (16%)
Query: 98 FETMRLYKSCK-QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER----DDIKLET 152
F T RL + I++SGG + +ESI + +E + + +I LE
Sbjct: 105 FTTQRLIEGASLARRKGYPILLSGG--LSYDKSESIARS---MERSIRKWGYKGEIMLEE 159
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS-----------QLYFQHFGINTKA 201
S T++N +S+S+++ IILV++++H+KRS ++Y G
Sbjct: 160 NSRTTWENMTYSASILRRKGIDRIILVTNSFHMKRSLWMAKKAMPDIEVYPYAIGSLADD 219
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
SD L IP + + LA KE +G+ +
Sbjct: 220 MDSDPLKW----IPTAGALRDSSLAWKEIVGLTV 249
>gi|229012351|ref|ZP_04169528.1| hypothetical protein bmyco0001_27960 [Bacillus mycoides DSM 2048]
gi|228748987|gb|EEL98835.1| hypothetical protein bmyco0001_27960 [Bacillus mycoides DSM 2048]
Length = 210
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ L+ GV+ +D
Sbjct: 61 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYALKHGVKEED 116
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T N + + + + +VS H+KR+ +H I AS +
Sbjct: 117 ILIETKSLFTEDNLKNAKQVGIENGIRTYTIVSDPLHMKRAMKIAKHIKIEAYASPTP-- 174
Query: 208 NAYYSIIPLSANFYLTELALKEYIG 232
+ Y + F+ EL YIG
Sbjct: 175 TSAYKTLDTEIPFFFKELC--SYIG 197
>gi|256830641|ref|YP_003159369.1| hypothetical protein Dbac_2878 [Desulfomicrobium baculatum DSM
4028]
gi|256579817|gb|ACU90953.1| protein of unknown function DUF218 [Desulfomicrobium baculatum DSM
4028]
Length = 260
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+++SGG K + + V ++ G I L Q+LDT A IK + G +
Sbjct: 133 LVLSGGK-FKDEQSNAQVMAAAAVDLGFNPGRIMLSDQALDTHDEAM----RIKALAGSD 187
Query: 176 I-ILVSSAYHLKRSQLYFQHFGINT--KASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+ +LV+SA H+ R+ F++ G+ +C +P + N +A+ EY+G
Sbjct: 188 LFVLVTSASHMLRAVKLFENQGLKPIPAPTCYQSKGEPEYFLPRADNIKTCHMAVHEYLG 247
Query: 233 ILIAYYRG 240
+ ++ RG
Sbjct: 248 LAWSFVRG 255
>gi|332686094|ref|YP_004455868.1| hypothetical protein MPTP_0591 [Melissococcus plutonius ATCC 35311]
gi|332370103|dbj|BAK21059.1| hypothetical protein MPTP_0591 [Melissococcus plutonius ATCC 35311]
Length = 196
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
K+HS II+ GG E+ V L + G+ R + E +S T +N Q++ +
Sbjct: 75 KKHSSTTKIIVCGGKGALEPTTEASVMATYLNKHGIPRQKLIQEKRSTRTKENIQYAMKL 134
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ N+ + +L++S +HL RS+ + GI++
Sbjct: 135 V-NLD--HALLITSDFHLYRSKWLAKQLGIHS 163
>gi|229060751|ref|ZP_04198106.1| hypothetical protein bcere0026_28450 [Bacillus cereus AH603]
gi|228718398|gb|EEL70030.1| hypothetical protein bcere0026_28450 [Bacillus cereus AH603]
Length = 210
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ L+ GV+ +D
Sbjct: 61 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYALKHGVKEED 116
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H I AS +
Sbjct: 117 ILIETKSLFTEENLKNAKQVGIENGIRTYTIVSDPLHMKRAMKIAKHIKIEAYASPTP-- 174
Query: 208 NAYYSIIPLSANFYLTELALKEYIG 232
+ Y + F+ EL YIG
Sbjct: 175 TSAYKTLDTEIPFFFKELC--SYIG 197
>gi|325576625|ref|ZP_08147343.1| transporter [Haemophilus parainfluenzae ATCC 33392]
gi|325161188|gb|EGC73303.1| transporter [Haemophilus parainfluenzae ATCC 33392]
Length = 387
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 102 RLYKSCK--QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL K+ + + II++GG PQ + E + L+E GV+ I + + T +
Sbjct: 238 RLEKTLEIANQNPDALIIVTGGVPQNNK-TEGDLMKQWLIEKGVDASRIYSDNYARSTVE 296
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
NA FS + + K+ +L+SS H++R Q F+
Sbjct: 297 NALFSRYSLAKHKIKHAVLISSGSHVRRGQALFE 330
>gi|229167811|ref|ZP_04295543.1| hypothetical protein bcere0007_27710 [Bacillus cereus AH621]
gi|228615627|gb|EEK72720.1| hypothetical protein bcere0007_27710 [Bacillus cereus AH621]
Length = 210
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ L+ GV+ +D
Sbjct: 61 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEEELEEARTARVYALKHGVKEED 116
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T N + + + + +VS H+KR+ +H I AS +
Sbjct: 117 ILIETKSLFTEDNLKNAKQVGIENGIRTYTIVSDPLHMKRAMKIAKHIKIEAYASPTP-- 174
Query: 208 NAYYSIIPLSANFYLTELALKEYIG 232
+ Y + F+ EL YIG
Sbjct: 175 TSAYKTLDTEIPFFFKELC--SYIG 197
>gi|227890086|ref|ZP_04007891.1| membrane protein [Lactobacillus johnsonii ATCC 33200]
gi|227849530|gb|EEJ59616.1| membrane protein [Lactobacillus johnsonii ATCC 33200]
Length = 346
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 23/154 (14%)
Query: 64 KDGNIIVLLGNGTTIIPTIP--AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + +V+LG G P A RI + Y R + II+SGG
Sbjct: 172 KKLDYVVVLGAGLMGKKVTPLLAARINRGIEVYRR--------------NPGSKIIMSGG 217
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ E++ E G+ + DI +E +S T +N FS ++K +V++
Sbjct: 218 QGPGEEIPEAVAMAKYAEEEGIPKQDIIVEDKSKTTRENLIFSHRLMK--PDSRFAIVTN 275
Query: 182 AYHLKRS-----QLYFQHFGINTKASCSDYLNAY 210
+YH+ R+ +L Q G K LNA+
Sbjct: 276 SYHVYRALVLAKRLGLQCIGYGAKTKWYFTLNAF 309
>gi|323467478|gb|ADX71165.1| Integral membrane protein [Lactobacillus helveticus H10]
Length = 374
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 60 PQWKKDGNIIVL---LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P+ K +IVL L NG + + A RI + Q YS R Y+ ++ + I
Sbjct: 180 PRRYKQDYLIVLGAGLINGDRVSKLLAA-RINRAIQ-YSN-----RQYQKGRKRPI---I 229
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKN 175
IISGG + E++ + G++ + + +E +S +T+QN FS + K+ N
Sbjct: 230 IISGGQGPDEKIPEAVAMAKFARKRGIKTNHLLIEDKSKNTYQNMLFSKRLATKDFGSSN 289
Query: 176 I--ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
S+ YH+ R+ L + G+ + + +YL ++E+ G+
Sbjct: 290 FRSTFFSNNYHIFRAALLAKEVGLKANGVGA-----------FTRLYYLPNAIIREFAGV 338
Query: 234 LI 235
+
Sbjct: 339 FV 340
>gi|329668109|gb|AEB94057.1| hypothetical protein LJP_1741 [Lactobacillus johnsonii DPC 6026]
Length = 373
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG + L+E+ + ++ G + + I LE +S +T+QN +S + N G +
Sbjct: 228 LIMSGGQGKDEDLSEAAAMKDYAVKHGYDPNLILLEDKSTNTYQNMLYSKKVAVNDWGNS 287
Query: 176 II---LVSSAYHLKRSQLY--FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
++ YHL R+ LY H N + + + ++L ++E+
Sbjct: 288 NFKAKFFTNNYHLFRAGLYAKMAHLKANGIGATTRF-------------YFLPNATIREF 334
Query: 231 IGILIAY 237
G+ I +
Sbjct: 335 AGVFIMH 341
>gi|1771201|emb|CAA68042.1| ORF [Lactococcus lactis]
Length = 283
Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 10/143 (6%)
Query: 102 RLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQ 159
R+ + K + TI++ SGG ++E+ +E G + LE QS T++
Sbjct: 131 RILAAVKAVRDNETILVFSGGQGPDEKISEARAMQKYAVEVLGFPIERTMLEDQSRTTYE 190
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
N FSS +IK + + +S YH+ R+ L+ I+ + YY +
Sbjct: 191 NLVFSSRLIK----EKFMFFTSDYHVFRAALFAATLKIDAQGGKGGKTAMYYRVPAFIRE 246
Query: 220 FYLTELALK----EYIGILIAYY 238
F K +++GI++A++
Sbjct: 247 FIAVMNYEKRKHIKWVGIIVAFF 269
>gi|56476276|ref|YP_157865.1| hypothetical protein ebA1532 [Aromatoleum aromaticum EbN1]
gi|56312319|emb|CAI06964.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 248
Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
S R+ +LY+ I++SGG P G +LE +E
Sbjct: 105 SLERVRYAAKLYRETG-----LPILVSGGRPGDIGTRSEAEIMQDILEQEFHVPVRWVEP 159
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
S DT QNA+ S+++++ I LV+ +H+ R+ F G+ + ++
Sbjct: 160 DSEDTQQNAERSAALLRAEGVTCIYLVTHGFHIDRAAAQFHKHGLEVVPMATGFVR 215
>gi|310642426|ref|YP_003947184.1| protein [Paenibacillus polymyxa SC2]
gi|309247376|gb|ADO56943.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2]
Length = 231
Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG-DPQKHGLAESIVYNNKLLESGVERD 146
EPS R+ E + LY++ + I+SGG D E+ L++ GV
Sbjct: 82 EPSPGLKERLEEALWLYRNGTVQRL----IVSGGLDQPDFPYTEAEGMQRYLVDRGVPVQ 137
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
I LE Q+ T++N +S ++K + ++++ +YH R+
Sbjct: 138 HILLENQATSTYENLLYSQRIMKEYDWNSTVIITHSYHGPRA 179
>gi|261406200|ref|YP_003242441.1| hypothetical protein GYMC10_2356 [Paenibacillus sp. Y412MC10]
gi|261282663|gb|ACX64634.1| protein of unknown function DUF218 [Paenibacillus sp. Y412MC10]
Length = 217
Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 115 TIIISGG-DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
T I++GG D ++ E+ N L+E+GV + I LE ++ T++N +S ++++
Sbjct: 93 TFIVTGGLDKPEYNYTEAEGMRNFLVEAGVPEERIFLENEATSTYENLLYSQAIMEEHGW 152
Query: 174 KNIILVSSAYHLKRS 188
I+V+ YH R+
Sbjct: 153 NTAIIVTHDYHGTRA 167
>gi|296138443|ref|YP_003645686.1| hypothetical protein Tpau_0710 [Tsukamurella paurometabola DSM
20162]
gi|296026577|gb|ADG77347.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 393
Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 106/246 (43%), Gaps = 34/246 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL+ +FL H L + I + + +L+ I ++ L + ++ L
Sbjct: 128 LLAEVFLGAHLLHALTEGISAV---TAVLLVALLIPGALVVLQLAAYTVYAVVHRRL--P 182
Query: 62 WKKDGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETM-RLYKSCKQHSMHCTII 117
+D ++V+LG NG + P + + R++ + R+ + + C H +I
Sbjct: 183 GGRDAGVVVVLGSGLNGERLTPLLRS-RMDLGISEFRRLVDDGGDPFLVCSGGRGHDEVI 241
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKN 175
G ++ LA+ I +N+LL E +S T +N ++S+ ++ + +
Sbjct: 242 AEGEAMARYALAQGI-PSNRLLR----------EVRSTTTEENLRYSAELLASEGIAWTR 290
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++ +S++H R+ + G+ A L A ++ A F L+E++ +++
Sbjct: 291 MLVTTSSFHALRAGSLTRRLGLPATA-----LGAPTALYFRPAAF------LREFVAVVV 339
Query: 236 AYYRGN 241
Y R N
Sbjct: 340 HYRRAN 345
>gi|281491044|ref|YP_003353024.1| hypothetical protein LLKF_0556 [Lactococcus lactis subsp. lactis
KF147]
gi|281374802|gb|ADA64322.1| Hypothetical protein LLKF_0556 [Lactococcus lactis subsp. lactis
KF147]
Length = 341
Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+K + I++LG+G P ++ SR+ + + Y Q + ++SGG
Sbjct: 163 QKKIDYIIILGSGVRSEEVPPLLK--------SRLDKGIEYY----QKNPTAKFVVSGGQ 210
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI------KNMQGKNI 176
++E+ L + I E +S T++N FS +I K M +I
Sbjct: 211 GADEPVSEAFAMRKYLHSQNIPNHQILFEDKSTTTYENMLFSKRIINEDWSDKEMP-PSI 269
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ YH+ R LY Q + + + +A ++L ++EYI +L+
Sbjct: 270 IFSTNNYHVLRGSLYAQRVKLKVQGVGAP-----------TALYFLPTALIREYIALLL 317
>gi|227878475|ref|ZP_03996414.1| membrane protein [Lactobacillus crispatus JV-V01]
gi|227861926|gb|EEJ69506.1| membrane protein [Lactobacillus crispatus JV-V01]
Length = 278
Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 18/138 (13%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G I ++ P + RI + +Y + +I+SGG +
Sbjct: 112 IVVLGAG------IMGTKVTPLLAA--RISRGIEIY----HKNPGSKLIMSGGQGPGEDI 159
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ + G+ ++DI +E +S T QN QFS +++K +V+S+YH+ R+
Sbjct: 160 PEAAAMAEYAEKLGINKNDIIIENKSKTTQQNLQFSHALMK--PNSRFCIVTSSYHVYRA 217
Query: 189 QLYFQHFGINTKASCSDY 206
+ + G+ C+ Y
Sbjct: 218 LVLAKRQGLK----CTGY 231
>gi|261364338|ref|ZP_05977221.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
gi|288567599|gb|EFC89159.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
Length = 197
Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 20/149 (13%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES--GV 143
R+ P +R+ + LY++ K + +++GG + +S N +++ GV
Sbjct: 56 RLNPCL--VARVEAAVELYRARKVKKL----VMTGGVSRD---LQSSAGNMQMIAEKMGV 106
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY----FQHFGINT 199
+ DI E ++ +TF+N FS I+N +++VS+ +HL R+++ +Q I
Sbjct: 107 SKADIIQEREAGNTFENIVFSRKFIEN--SPRVVIVSAGFHLARARMMADRQWQGHDIQV 164
Query: 200 KAS--CSDYLNAY-YSIIPLSANFYLTEL 225
A+ CS+ Y ++++ SA F L
Sbjct: 165 YAAPFCSEPYGGYGFTVLRESAAFVKNAL 193
>gi|30021189|ref|NP_832820.1| EpiH/GdmH-related protein [Bacillus cereus ATCC 14579]
gi|30263055|ref|NP_845432.1| hypothetical protein BA_3106 [Bacillus anthracis str. Ames]
gi|47528398|ref|YP_019747.1| hypothetical protein GBAA_3106 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49185896|ref|YP_029148.1| hypothetical protein BAS2890 [Bacillus anthracis str. Sterne]
gi|49479533|ref|YP_037182.1| hypothetical protein BT9727_2858 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|165868915|ref|ZP_02213575.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167632539|ref|ZP_02390866.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167637429|ref|ZP_02395709.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170685113|ref|ZP_02876338.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170704915|ref|ZP_02895380.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177650000|ref|ZP_02933001.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190564854|ref|ZP_03017775.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|196032544|ref|ZP_03099958.1| conserved hypothetical protein [Bacillus cereus W]
gi|196038177|ref|ZP_03105487.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196042737|ref|ZP_03109976.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|218232485|ref|YP_002367802.1| hypothetical protein BCB4264_A3095 [Bacillus cereus B4264]
gi|218904226|ref|YP_002452060.1| hypothetical protein BCAH820_3110 [Bacillus cereus AH820]
gi|225865058|ref|YP_002750436.1| hypothetical protein BCA_3166 [Bacillus cereus 03BB102]
gi|227814096|ref|YP_002814105.1| hypothetical protein BAMEG_1503 [Bacillus anthracis str. CDC 684]
gi|229600823|ref|YP_002867325.1| hypothetical protein BAA_3156 [Bacillus anthracis str. A0248]
gi|254685645|ref|ZP_05149504.1| hypothetical protein BantC_17565 [Bacillus anthracis str.
CNEVA-9066]
gi|254723056|ref|ZP_05184844.1| hypothetical protein BantA1_11354 [Bacillus anthracis str. A1055]
gi|254738109|ref|ZP_05195812.1| hypothetical protein BantWNA_23369 [Bacillus anthracis str. Western
North America USA6153]
gi|254742718|ref|ZP_05200403.1| hypothetical protein BantKB_17177 [Bacillus anthracis str. Kruger
B]
gi|254752426|ref|ZP_05204462.1| hypothetical protein BantV_08161 [Bacillus anthracis str. Vollum]
gi|254760943|ref|ZP_05212967.1| hypothetical protein BantA9_21746 [Bacillus anthracis str.
Australia 94]
gi|296503616|ref|YP_003665316.1| EpiH/GdmH-related protein [Bacillus thuringiensis BMB171]
gi|300118019|ref|ZP_07055768.1| hypothetical protein BCSJ1_08918 [Bacillus cereus SJ1]
gi|301054601|ref|YP_003792812.1| hypothetical protein BACI_c30540 [Bacillus anthracis CI]
gi|29896743|gb|AAP10021.1| EpiH/GdmH-related protein [Bacillus cereus ATCC 14579]
gi|30257688|gb|AAP26918.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47503546|gb|AAT32222.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49179823|gb|AAT55199.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|49331089|gb|AAT61735.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|164715641|gb|EDR21158.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167514936|gb|EDR90302.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167532837|gb|EDR95473.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170129770|gb|EDS98632.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170671373|gb|EDT22111.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172083952|gb|EDT69011.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190564171|gb|EDV18135.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|195995295|gb|EDX59249.1| conserved hypothetical protein [Bacillus cereus W]
gi|196026221|gb|EDX64889.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|196031447|gb|EDX70044.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|218160442|gb|ACK60434.1| conserved hypothetical protein [Bacillus cereus B4264]
gi|218536393|gb|ACK88791.1| conserved hypothetical protein [Bacillus cereus AH820]
gi|225786516|gb|ACO26733.1| conserved hypothetical protein [Bacillus cereus 03BB102]
gi|227003379|gb|ACP13122.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|229265231|gb|ACQ46868.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
gi|296324668|gb|ADH07596.1| EpiH/GdmH-related protein [Bacillus thuringiensis BMB171]
gi|298724604|gb|EFI65297.1| hypothetical protein BCSJ1_08918 [Bacillus cereus SJ1]
gi|300376770|gb|ADK05674.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
Length = 210
Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 61 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKEED 116
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 117 ILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 174
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 175 TSAYKTLDTEIPFFFKEL 192
>gi|221195587|ref|ZP_03568642.1| integral membrane protein [Atopobium rimae ATCC 49626]
gi|221184774|gb|EEE17166.1| integral membrane protein [Atopobium rimae ATCC 49626]
Length = 346
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
RI + L+K + + SGG + E+ L+E GV ++ I +E +S
Sbjct: 192 GRINRALELWK---RQDCCGKFVASGGQGDDEVVTEAQAMRGYLMEHGVSQETILMEDRS 248
Query: 155 LDTFQNAQFSSSMIK---NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
T++N ++S ++ Q +V+S +H+ R Y + G+ S
Sbjct: 249 RTTWENLKYSQMLMNADAQYQDYTAAMVTSDFHVFRCAEYAHNLGLKADGVGS 301
>gi|317055190|ref|YP_004103657.1| hypothetical protein Rumal_0470 [Ruminococcus albus 7]
gi|315447459|gb|ADU21023.1| protein of unknown function DUF218 [Ruminococcus albus 7]
Length = 198
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL---AESIVYNNKLLESGVERDDIKLET 152
R+ E +RLY K I++SGG Q L AE L G+ DI E
Sbjct: 46 RVPEAVRLYNEGKAP----LILLSGGQVQDTSLGNMAEWESMKKAALALGISESDILAEK 101
Query: 153 QSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRS 188
S +T +N +S ++ G IILV++AYH++R+
Sbjct: 102 LSKNTAENFMYSDELLIGYLPLGSKIILVTTAYHMRRA 139
>gi|260582799|ref|ZP_05850585.1| molybdate ABC transporter permease [Haemophilus influenzae NT127]
gi|260094125|gb|EEW78027.1| molybdate ABC transporter permease [Haemophilus influenzae NT127]
Length = 247
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+E ++ +T +NA F+ +++ + IILV++ +H+KR++ F+ G + + + +
Sbjct: 152 IENKARNTEENASFTKNILVKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAA---AS 208
Query: 210 YYSIIPLSANFYLTELA--------LKEYIGILIAYY 238
Y S LSA ++ +L LKE+IG A+Y
Sbjct: 209 YGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAHY 245
>gi|68250305|ref|YP_249417.1| hypothetical protein NTHI2008 [Haemophilus influenzae 86-028NP]
gi|145633636|ref|ZP_01789363.1| hypothetical protein CGSHi3655_00981 [Haemophilus influenzae 3655]
gi|148825756|ref|YP_001290509.1| hypothetical protein CGSHiEE_03525 [Haemophilus influenzae PittEE]
gi|229845236|ref|ZP_04465369.1| hypothetical protein CGSHi6P18H1_02444 [Haemophilus influenzae
6P18H1]
gi|229847322|ref|ZP_04467424.1| hypothetical protein CGSHi7P49H1_00484 [Haemophilus influenzae
7P49H1]
gi|68058504|gb|AAX88757.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
gi|144985513|gb|EDJ92329.1| hypothetical protein CGSHi3655_00981 [Haemophilus influenzae 3655]
gi|148715916|gb|ABQ98126.1| hypothetical protein CGSHiEE_03525 [Haemophilus influenzae PittEE]
gi|229809747|gb|EEP45471.1| hypothetical protein CGSHi7P49H1_00484 [Haemophilus influenzae
7P49H1]
gi|229811831|gb|EEP47527.1| hypothetical protein CGSHi6P18H1_02444 [Haemophilus influenzae
6P18H1]
Length = 247
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+E ++ +T +NA F+ +++ + IILV++ +H+KR++ F+ G + + + +
Sbjct: 152 IENKARNTEENASFTKNILVKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAA---S 208
Query: 210 YYSIIPLSANFYLTELA--------LKEYIGILIAYY 238
Y S LSA ++ +L LKE+IG A+Y
Sbjct: 209 YGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAHY 245
>gi|229097607|ref|ZP_04228566.1| hypothetical protein bcere0020_28490 [Bacillus cereus Rock3-29]
gi|229106282|ref|ZP_04236779.1| hypothetical protein bcere0019_52930 [Bacillus cereus Rock3-28]
gi|229116606|ref|ZP_04245993.1| hypothetical protein bcere0017_28920 [Bacillus cereus Rock1-3]
gi|228666916|gb|EEL22371.1| hypothetical protein bcere0017_28920 [Bacillus cereus Rock1-3]
gi|228677137|gb|EEL31517.1| hypothetical protein bcere0019_52930 [Bacillus cereus Rock3-28]
gi|228685877|gb|EEL39796.1| hypothetical protein bcere0020_28490 [Bacillus cereus Rock3-29]
Length = 219
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ L+ GV+ +D
Sbjct: 70 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYALKQGVKEED 125
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 126 ILIETKSLFTEENLKNAKEVGIENGIHSYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 183
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 184 TSAYKTLDTEIPFFFKEL 201
>gi|146292475|ref|YP_001182899.1| hypothetical protein Sputcn32_1372 [Shewanella putrefaciens CN-32]
gi|145564165|gb|ABP75100.1| protein of unknown function DUF218 [Shewanella putrefaciens CN-32]
gi|319425777|gb|ADV53851.1| protein of unknown function DUF218 [Shewanella putrefaciens 200]
Length = 231
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSM--HCTIIISGGDPQKHGLAESIVYNNKLLESG 142
I+ + QS S + RL + +Q + C +I+SG + ++ + + +E G
Sbjct: 76 IQAATAVQSLSAV-ALARLSEGIRQLGLGQDCILIVSGWGGELTQISHAEMMAKAAVELG 134
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V++ I + DT + AQ+ + + + LV+SA H+ R+ F G+ A+
Sbjct: 135 VDKSKIIQFPLARDTLEEAQY---LKWELGDSSFRLVTSASHMPRAMAIFTGKGLLASAA 191
Query: 203 CSDYLNAYYSIIPLSA-NFYLTELALKEYIGIL 234
+D+ L+A N ++ A+ EYIG L
Sbjct: 192 PTDFRARDDFWWRLTADNLVSSQRAIHEYIGRL 224
>gi|118478405|ref|YP_895556.1| hypothetical protein BALH_2770 [Bacillus thuringiensis str. Al
Hakam]
gi|118417630|gb|ABK86049.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 225
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 76 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKEED 131
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 132 ILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 189
Query: 208 NAYYSIIPLSANFYLTELALKEYIG 232
+ Y + F+ EL YIG
Sbjct: 190 TSAYKTLDTEIPFFFKELF--SYIG 212
>gi|262046176|ref|ZP_06019139.1| integral membrane protein [Lactobacillus crispatus MV-3A-US]
gi|260573506|gb|EEX30063.1| integral membrane protein [Lactobacillus crispatus MV-3A-US]
Length = 293
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 18/138 (13%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G I ++ P + RI + +Y + I+SGG +
Sbjct: 127 IVVLGAG------IMGTKVTPLLAA--RISRGIEIYHKNPGSKL----IMSGGQGPGEDI 174
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ + G+ ++DI +E +S T QN QFS +++K +V+S+YH+ R+
Sbjct: 175 PEAAAMAEYAEKLGINKNDIIIENKSKTTQQNLQFSHALMK--PNSRFCIVTSSYHVYRA 232
Query: 189 QLYFQHFGINTKASCSDY 206
+ + G+ C+ Y
Sbjct: 233 LVLAKRQGLK----CTGY 246
>gi|253578606|ref|ZP_04855878.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850924|gb|EES78882.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 177
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN- 175
++SGG + E+ N L+E G++R+ + LE +S T +N +FS MI G N
Sbjct: 64 VLSGGKGDGESITEAQAMCNYLVEHGIDRERLILEEKSTSTTENLKFSLGMI----GLNH 119
Query: 176 -IILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+ +V++ +H+ F+ I K C +
Sbjct: 120 SVGIVTNNFHV------FRGTAIGKKCGCRE 144
>gi|323467429|gb|ADX71116.1| Membrane protein [Lactobacillus helveticus H10]
Length = 343
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 25/150 (16%)
Query: 69 IVLLGNGT---TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+V+LG G T+ P + A RI + +Y Q + +I+SGG
Sbjct: 177 VVVLGAGIIGKTVTPLLAA-----------RITRGIEIY----QKNPGSKLIMSGGQGPG 221
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ E+ + G+ ++DI +E +S T +N +FS +++K +V+++YH+
Sbjct: 222 EDIPEAEAMAEYAINLGIPKEDIIIENKSRTTNENLRFSHALMK--PNSKFCIVTNSYHV 279
Query: 186 KRSQLY-----FQHFGINTKASCSDYLNAY 210
R+ + Q G K LNA+
Sbjct: 280 YRALVLAKRQGLQCIGYGAKTKWYFTLNAF 309
>gi|82701477|ref|YP_411043.1| hypothetical protein Nmul_A0343 [Nitrosospira multiformis ATCC
25196]
gi|82409542|gb|ABB73651.1| Protein of unknown function DUF218 [Nitrosospira multiformis ATCC
25196]
Length = 251
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I+ +GG P + +E++ L E + + ET S +T +NA S ++++ +
Sbjct: 121 ILTAGGAPLGNHSSEAMQMKAVLEEEFLVPVEWVEETSS-NTRENAYKSFAILQKQGIRQ 179
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY----YSIIPLSANFYLTELALKEYI 231
I LV+ A+H+ R+ F+ G + + Y Y + IP + + L E I
Sbjct: 180 IALVTHAWHMPRAAREFEQAGFEVTPAATGYTRRYKTDLLTFIPNAGALLKSSLFFHEVI 239
Query: 232 GILIAYYR 239
GIL +YR
Sbjct: 240 GIL--WYR 245
>gi|39997331|ref|NP_953282.1| hypothetical protein GSU2233 [Geobacter sulfurreducens PCA]
gi|39984222|gb|AAR35609.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
gi|298506268|gb|ADI84991.1| YdcF-like protein of unknown function DUF218 [Geobacter
sulfurreducens KN400]
Length = 199
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ E +RL++ K ++ G DP + + ++ ++ E +R + LE S
Sbjct: 51 GRVEEGVRLFRERKGTYLYLI----GVDPV---VKKRDLFRDREGERLADR--VFLENLS 101
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+T +NA + +I + ++I L++S YH+KR+ L F+
Sbjct: 102 RNTLENALYGREIIMRKEVRSIRLITSRYHMKRATLLFRQ 141
>gi|328948744|ref|YP_004366081.1| hypothetical protein Tresu_1898 [Treponema succinifaciens DSM 2489]
gi|328449068|gb|AEB14784.1| protein of unknown function DUF218 [Treponema succinifaciens DSM
2489]
Length = 273
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 94/228 (41%), Gaps = 38/228 (16%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSC--------FMLLFSFIGWGIIPTILLKHLQFSYQRP 56
W+++ V + L RK+ + C +L+F F I + L F P
Sbjct: 39 WLWIAVFFVLLFVLERRKVLKIICSRISKRIKIILIFLFFAGVFISGLNL----FFICNP 94
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
LS K++ +++LG G T ++ S ++ R+ + K HS +
Sbjct: 95 RLS-DGKENVRYVIVLGGGIT-----KDAKLTDSVKNRVRVAS-----EYFKAHS-AALV 142
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--- 173
+++GG + ES V L G++ + I E ++ DT QN FS+ + G
Sbjct: 143 VVTGGKGKFSPCPESDVLKPVLASYGIDENRILAENKAKDTIQNFMFSAKLFAEYDGISM 202
Query: 174 -----KNIILVSSAYHLKRSQL------YFQHFGINTKASCSDYLNAY 210
+ +V+S +H+ R++ + +G+ +K LN+Y
Sbjct: 203 EEVLASPVAVVTSDFHIARAERLASRMGFSDVYGVASKTPPLFVLNSY 250
>gi|297587158|ref|ZP_06945803.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
gi|297575139|gb|EFH93858.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
Length = 308
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
R+ S + +I+I G + ES+ N +++ ++ DI LE +++T QN
Sbjct: 161 RMLTSFSYYRTDKSIMIFSGGKSNGDIEESVAMKNFAVQNNIQDTDILLEKLAMNTMQNI 220
Query: 162 QFSSSMIKNMQG----KNIILVSSAYHLKRSQLYFQHFGIN-----TKASCSDYLNAYYS 212
++ ++I+ K + ++++ +H R++L +N +++ + +N Y
Sbjct: 221 EYVKTLIQQQDAEHDRKKVCVITNNFHAFRTKLICNKMKVNWTVIPAESNLNSKINTY-- 278
Query: 213 IIPLSANFYL 222
+I L A YL
Sbjct: 279 LIELLAAIYL 288
>gi|65320363|ref|ZP_00393322.1| COG1434: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
gi|228915677|ref|ZP_04079263.1| hypothetical protein bthur0012_28950 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228928153|ref|ZP_04091197.1| hypothetical protein bthur0010_28550 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228934353|ref|ZP_04097192.1| hypothetical protein bthur0009_28120 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228946697|ref|ZP_04109005.1| hypothetical protein bthur0007_28350 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229046787|ref|ZP_04192429.1| hypothetical protein bcere0027_28050 [Bacillus cereus AH676]
gi|229092098|ref|ZP_04223281.1| hypothetical protein bcere0021_28900 [Bacillus cereus Rock3-42]
gi|229110541|ref|ZP_04240111.1| hypothetical protein bcere0018_27940 [Bacillus cereus Rock1-15]
gi|229122649|ref|ZP_04251860.1| hypothetical protein bcere0016_29430 [Bacillus cereus 95/8201]
gi|229128413|ref|ZP_04257394.1| hypothetical protein bcere0015_28580 [Bacillus cereus BDRD-Cer4]
gi|229145685|ref|ZP_04274067.1| hypothetical protein bcere0012_28360 [Bacillus cereus BDRD-ST24]
gi|229151285|ref|ZP_04279491.1| hypothetical protein bcere0011_28320 [Bacillus cereus m1550]
gi|229185305|ref|ZP_04312489.1| hypothetical protein bcere0004_28590 [Bacillus cereus BGSC 6E1]
gi|228598225|gb|EEK55861.1| hypothetical protein bcere0004_28590 [Bacillus cereus BGSC 6E1]
gi|228632285|gb|EEK88908.1| hypothetical protein bcere0011_28320 [Bacillus cereus m1550]
gi|228637775|gb|EEK94223.1| hypothetical protein bcere0012_28360 [Bacillus cereus BDRD-ST24]
gi|228655272|gb|EEL11129.1| hypothetical protein bcere0015_28580 [Bacillus cereus BDRD-Cer4]
gi|228660901|gb|EEL16530.1| hypothetical protein bcere0016_29430 [Bacillus cereus 95/8201]
gi|228673025|gb|EEL28299.1| hypothetical protein bcere0018_27940 [Bacillus cereus Rock1-15]
gi|228691263|gb|EEL45026.1| hypothetical protein bcere0021_28900 [Bacillus cereus Rock3-42]
gi|228724550|gb|EEL75865.1| hypothetical protein bcere0027_28050 [Bacillus cereus AH676]
gi|228812994|gb|EEM59307.1| hypothetical protein bthur0007_28350 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228825521|gb|EEM71315.1| hypothetical protein bthur0009_28120 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228831570|gb|EEM77163.1| hypothetical protein bthur0010_28550 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228843963|gb|EEM89026.1| hypothetical protein bthur0012_28950 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 219
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 70 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKEED 125
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 126 ILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 183
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 184 TSAYKTLDTEIPFFFKEL 201
>gi|307943505|ref|ZP_07658849.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307773135|gb|EFO32352.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 245
Score = 40.0 bits (92), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 23/152 (15%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHG--LAESIVYNNKLLESGVERDDIKLETQ 153
RI + MRL + + + +ISG P +A++ + L V+ L+
Sbjct: 101 RISKAMRLLEEGRAERL----LISGVHPGSSARQIAQATSSDLPLFTCCVD-----LDRA 151
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA------SCSDYL 207
+L+T NA ++S + + + +++V+SAYHL R++L N S L
Sbjct: 152 ALNTLGNATETASWVAEHEFETLLVVTSAYHLPRAELELAEVLPNAGLLPYPVFSSERDL 211
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A+YS +F +L ++EY+ +A R
Sbjct: 212 TAWYS------SFDTLKLLMREYVKYTLARLR 237
>gi|309972903|gb|ADO96104.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 247
Score = 40.0 bits (92), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+E ++ +T +NA F+ +++ + IILV++ +H+KR++ F+ G + + + +
Sbjct: 152 IENKARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAA---AS 208
Query: 210 YYSIIPLSANFYLTELA--------LKEYIGILIAYY 238
Y S LSA ++ +L LKE+IG A+Y
Sbjct: 209 YGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAHY 245
>gi|218235669|ref|YP_002366399.1| hypothetical protein BCB4264_A1680 [Bacillus cereus B4264]
gi|218163626|gb|ACK63618.1| conserved hypothetical protein [Bacillus cereus B4264]
Length = 192
Score = 40.0 bits (92), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ ++ + SYS + + + K H I+SGG +
Sbjct: 39 DADYIIVLGS-----------KVNGTKTSYSLQYRIDKAAEYLKSHE-KTIAIVSGGQGK 86
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ L++ + D I +E +S T +N FS +I K +I V++ +H
Sbjct: 87 GEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTNDFH 145
Query: 185 LKRSQ 189
+ R++
Sbjct: 146 MFRAK 150
>gi|325917198|ref|ZP_08179425.1| hypothetical protein XVE_3418 [Xanthomonas vesicatoria ATCC 35937]
gi|325536588|gb|EGD08357.1| hypothetical protein XVE_3418 [Xanthomonas vesicatoria ATCC 35937]
Length = 183
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 12/139 (8%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
++I++LG R P F+ RI + LY ++ +GG
Sbjct: 26 ADVIIVLGAAAY------DARPSPVFEE--RIRHALDLYG----QGYAPRLLFTGGFGNG 73
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
AES V L GV + I +ET S T QN + ++++ I+VS H+
Sbjct: 74 ARFAESQVARRYALRHGVPPEAIVIETSSRTTRQNLLQARALMERHGMHRAIIVSDPLHM 133
Query: 186 KRSQLYFQHFGINTKASCS 204
R+ Q G++ AS +
Sbjct: 134 ARALRLCQELGVDALASST 152
>gi|163940818|ref|YP_001645702.1| hypothetical protein BcerKBAB4_2882 [Bacillus weihenstephanensis
KBAB4]
gi|229133982|ref|ZP_04262803.1| hypothetical protein bcere0014_28980 [Bacillus cereus BDRD-ST196]
gi|163863015|gb|ABY44074.1| protein of unknown function DUF218 [Bacillus weihenstephanensis
KBAB4]
gi|228649475|gb|EEL05489.1| hypothetical protein bcere0014_28980 [Bacillus cereus BDRD-ST196]
Length = 210
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ L+ GV+ +D
Sbjct: 61 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYALKHGVKEED 116
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T N + + + + +VS H+KR+ +H I AS +
Sbjct: 117 ILIETKSLFTEDNLKNAKQVGIENGIRTYTIVSDPLHMKRAMKIAKHIKIEAYASPTP-- 174
Query: 208 NAYYSIIPLSANFYLTELALKEYIG 232
+ Y + F+ EL YIG
Sbjct: 175 TSAYKTLDTEIPFFFKELC--SYIG 197
>gi|145629203|ref|ZP_01785002.1| hypothetical protein CGSHi22121_10385 [Haemophilus influenzae
22.1-21]
gi|145639142|ref|ZP_01794749.1| hypothetical protein CGSHiII_03869 [Haemophilus influenzae PittII]
gi|144978706|gb|EDJ88429.1| hypothetical protein CGSHi22121_10385 [Haemophilus influenzae
22.1-21]
gi|145271704|gb|EDK11614.1| hypothetical protein CGSHiII_03869 [Haemophilus influenzae PittII]
gi|309750723|gb|ADO80707.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
Length = 247
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+E ++ +T +NA F+ +++ + IILV++ +H+KR++ F+ G + + + +
Sbjct: 152 IENKARNTEENASFTKNILIKDNIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAA---AS 208
Query: 210 YYSIIPLSANFYLTELA--------LKEYIGILIAYY 238
Y S LSA ++ +L LKE+IG A+Y
Sbjct: 209 YSSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAHY 245
>gi|145637641|ref|ZP_01793296.1| hypothetical protein CGSHiHH_03118 [Haemophilus influenzae PittHH]
gi|145269164|gb|EDK09112.1| hypothetical protein CGSHiHH_03118 [Haemophilus influenzae PittHH]
Length = 247
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+E ++ +T +NA F+ +++ + IILV++ +H+KR++ F+ G + + + +
Sbjct: 152 IENKARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAA---AS 208
Query: 210 YYSIIPLSANFYLTELA--------LKEYIGILIAYY 238
Y S LSA ++ +L LKE+IG A+Y
Sbjct: 209 YGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAHY 245
>gi|228959326|ref|ZP_04121021.1| hypothetical protein bthur0005_28140 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228800396|gb|EEM47318.1| hypothetical protein bthur0005_28140 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 219
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 70 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKEED 125
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 126 ILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 183
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 184 TSAYKTLDTEIPFFFKEL 201
>gi|228964701|ref|ZP_04125808.1| hypothetical protein bthur0004_15450 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228794951|gb|EEM42450.1| hypothetical protein bthur0004_15450 [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 194
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 19/128 (14%)
Query: 65 DGNIIVLLG---NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + I++LG NG +PS+ RI + KS ++ I+SGG
Sbjct: 41 DADYIIVLGSKVNGA-----------KPSYSLQYRIDKAAEYLKSHEK----TIAIVSGG 85
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++E++ L++ + D I +E +S T +N FS +I K +I V++
Sbjct: 86 QGKGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTN 144
Query: 182 AYHLKRSQ 189
+H+ R++
Sbjct: 145 DFHMFRAK 152
>gi|332715738|ref|YP_004443204.1| hypothetical protein AGROH133_10165 [Agrobacterium sp. H13-3]
gi|325062423|gb|ADY66113.1| hypothetical protein AGROH133_10165 [Agrobacterium sp. H13-3]
Length = 232
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ L+ GV+ + E SL T++NA F+ ++ M K+ ILV+S +H +R+ F+
Sbjct: 114 RDMLVRLGVDSAVVSTECLSLSTWENATFAQPILTGMGAKSAILVTSWFHSRRAVKRFR 172
>gi|145641039|ref|ZP_01796620.1| hypothetical protein CGSHiR3021_08216 [Haemophilus influenzae
R3021]
gi|145274200|gb|EDK14065.1| hypothetical protein CGSHiR3021_08216 [Haemophilus influenzae
22.4-21]
Length = 247
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+E ++ +T +NA F+ +++ + IILV++ +H+KR++ F+ G + + + +
Sbjct: 152 IENKARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAA---S 208
Query: 210 YYSIIPLSANFYLTELA--------LKEYIGILIAYY 238
Y S LSA ++ +L LKE+IG A+Y
Sbjct: 209 YGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAHY 245
>gi|326406078|gb|ADZ63149.1| conserved hypothetical protein [Lactococcus lactis subsp. lactis
CV56]
Length = 341
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+K + I++LG+G P ++ SR+ + + Y Q + ++SGG
Sbjct: 163 QKKIDYIIILGSGVRSEEVPPLLK--------SRLDKGIEYY----QKNPTAKFVVSGGQ 210
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI------KNMQGKNI 176
++E+ L + I E +S T++N FS +I K M +I
Sbjct: 211 GADEPVSEAFAMRKYLHSQNIPNHQILFEDKSTTTYENMLFSKRIINEDWSDKEML-PSI 269
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I ++ YH+ R LY Q + + + +A ++L ++EYI +L+
Sbjct: 270 IFSTNNYHVLRGSLYAQRVKLKAQGVGAP-----------TALYFLPTALIREYIALLL 317
>gi|145631591|ref|ZP_01787357.1| hypothetical protein CGSHi22421_02276 [Haemophilus influenzae
R3021]
gi|144982791|gb|EDJ90317.1| hypothetical protein CGSHi22421_02276 [Haemophilus influenzae
R3021]
Length = 247
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+E ++ +T +NA F+ +++ + IILV++ +H+KR++ F+ G + + + +
Sbjct: 152 IENKARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAA---S 208
Query: 210 YYSIIPLSANFYLTELA--------LKEYIGILIAYY 238
Y S LSA ++ +L LKE+IG A+Y
Sbjct: 209 YGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAHY 245
>gi|163939519|ref|YP_001644403.1| hypothetical protein BcerKBAB4_1530 [Bacillus weihenstephanensis
KBAB4]
gi|163861716|gb|ABY42775.1| protein of unknown function DUF218 [Bacillus weihenstephanensis
KBAB4]
Length = 194
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ ++ + SYS + + + K H I+SGG +
Sbjct: 41 DADYIIVLGS-----------KVNGTKPSYSLQYRIDKAAEYLKLHD-KTIAIVSGGQGK 88
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E++ L++ + D I +E +S T +N +FS +I K +I V++ +H
Sbjct: 89 GEDITEALAMKQGLMKQNIAEDRIIMEDKSTSTDENIKFSKPLIPANMKKGMI-VTNDFH 147
Query: 185 LKRSQ 189
+ R++
Sbjct: 148 MFRAK 152
>gi|301170456|emb|CBW30063.1| conserved hypothetical protein [Haemophilus influenzae 10810]
Length = 247
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+E ++ +T +NA F+ +++ + IILV++ +H+KR++ F+ G + + + +
Sbjct: 152 IENKARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAA---AS 208
Query: 210 YYSIIPLSANFYLTELA--------LKEYIGILIAYY 238
Y S LSA ++ +L LKE+IG A+Y
Sbjct: 209 YGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAHY 245
>gi|145635442|ref|ZP_01791143.1| hypothetical protein CGSHiAA_03441 [Haemophilus influenzae PittAA]
gi|145267316|gb|EDK07319.1| hypothetical protein CGSHiAA_03441 [Haemophilus influenzae PittAA]
Length = 247
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+E ++ +T +NA F+ +++ + IILV++ +H+KR++ F+ G + + + +
Sbjct: 152 IENKARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAA---AS 208
Query: 210 YYSIIPLSANFYLTELA--------LKEYIGILIAYY 238
Y S LSA ++ +L LKE+IG A+Y
Sbjct: 209 YGSKGNLSAKSFVPDLGALNSNMVLLKEWIGYWKAHY 245
>gi|148827124|ref|YP_001291877.1| hypothetical protein CGSHiGG_02255 [Haemophilus influenzae PittGG]
gi|148718366|gb|ABQ99493.1| molybdate ABC transporter permease protein [Haemophilus influenzae
PittGG]
Length = 247
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+E ++ +T +NA F+ +++ + IILV++ +H+KR++ F+ G + + + +
Sbjct: 152 IENKARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAA---AS 208
Query: 210 YYSIIPLSANFYLTELA--------LKEYIGILIAYY 238
Y S LSA ++ +L LKE+IG A+Y
Sbjct: 209 YGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAHY 245
>gi|16273588|ref|NP_439843.1| hypothetical protein HI1701 [Haemophilus influenzae Rd KW20]
gi|260581042|ref|ZP_05848864.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|1176139|sp|P44292|Y1701_HAEIN RecName: Full=Uncharacterized protein HI_1701
gi|1574555|gb|AAC23347.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|260092282|gb|EEW76223.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 247
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+E ++ +T +NA F+ +++ + IILV++ +H+KR++ F+ G + + + +
Sbjct: 152 IENKARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAA---S 208
Query: 210 YYSIIPLSANFYLTELA--------LKEYIGILIAYY 238
Y S LSA ++ +L LKE+IG A+Y
Sbjct: 209 YGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAHY 245
>gi|227893937|ref|ZP_04011742.1| membrane protein [Lactobacillus ultunensis DSM 16047]
gi|227864241|gb|EEJ71662.1| membrane protein [Lactobacillus ultunensis DSM 16047]
Length = 350
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG + E+ + +GV + DI +E +S T +N +FS +++K
Sbjct: 219 LIMSGGQGPGEDIPEAEAMAEYAMNAGVPKADIIIENKSRTTNENLRFSHALMK--PDSK 276
Query: 176 IILVSSAYHLKRSQLYFQHFGIN 198
+V+S+YH+ R+ + + G+
Sbjct: 277 FCIVTSSYHVYRALVLAKRQGLK 299
>gi|148265185|ref|YP_001231891.1| hypothetical protein Gura_3157 [Geobacter uraniireducens Rf4]
gi|146398685|gb|ABQ27318.1| protein of unknown function DUF218 [Geobacter uraniireducens Rf4]
Length = 199
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 29/169 (17%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
M+ F +FS + ++ +L + F+Y+ L + K I+VL G
Sbjct: 1 MAFFRGIFSLLVISLVVIAVL-FVDFTYKTFSLRQRDVKSDAIVVLAGG----------- 48
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
RI E +RLY+ + + + G DP + + ++ + E E
Sbjct: 49 --------RGRIEEGVRLYRENRAR----WLFLIGVDP---AVRKGELFTERRGERSGE- 92
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ LE S +T +NA ++ MI +I L++S YH+KR+ L F+
Sbjct: 93 -GVFLENVSRNTLENALYAREMIVRHNVSSIKLITSRYHMKRATLIFRQ 140
>gi|93006297|ref|YP_580734.1| hypothetical protein Pcryo_1471 [Psychrobacter cryohalolentis K5]
gi|92393975|gb|ABE75250.1| protein of unknown function DUF218 [Psychrobacter cryohalolentis
K5]
Length = 257
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
H + I++SG AE+ L+E G+ D + E S++T +NA+F++ K
Sbjct: 113 HDLPLPIVLSG--------AEAPWLGQWLIEHGI--DGLISENASMNTCENARFTA---K 159
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+ ++ L++ +YH+ R++ F GIN+ A
Sbjct: 160 RIPLHHVYLITDSYHMARARRQFALNGINSTA 191
>gi|71065507|ref|YP_264234.1| hypothetical protein Psyc_0947 [Psychrobacter arcticus 273-4]
gi|71038492|gb|AAZ18800.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 265
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
H + I++SG AE+ L+E G+ D + E S++T +NA+F++ K
Sbjct: 121 HDLPLPIVLSG--------AEAPWLGQWLIEHGI--DGLISENASMNTCENARFTA---K 167
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+ ++ L++ +YH+ R++ F GIN+ A
Sbjct: 168 RIPLHHVYLITDSYHMARARRQFALNGINSTA 199
>gi|328463014|gb|EGF34808.1| hypothetical protein AAULH_13826 [Lactobacillus helveticus MTCC
5463]
Length = 222
Score = 39.7 bits (91), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 25/150 (16%)
Query: 69 IVLLGNG---TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+V+LG G TI P + A RI + +Y Q + +I+SGG
Sbjct: 56 VVVLGAGIMGKTITPLLAA-----------RITRGIEIY----QKNPGSKLIMSGGQGPG 100
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ E+ + G+ ++DI +E +S T +N +FS +++K +V+++YH+
Sbjct: 101 EDILEAEAMAEYAINLGIPKEDIIIENKSRTTNENLRFSYALMK--PNSKFCIVTNSYHV 158
Query: 186 KRSQLY-----FQHFGINTKASCSDYLNAY 210
R+ + Q G K LNA+
Sbjct: 159 YRALVLAKRQGLQCIGYGAKTKWYFTLNAF 188
>gi|326802974|ref|YP_004320792.1| hypothetical protein HMPREF9243_0445 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651445|gb|AEA01628.1| putative membrane protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 345
Score = 39.7 bits (91), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 13/134 (9%)
Query: 63 KKDGNIIVL--LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+K II+L L N + + +R++ R + H + I+
Sbjct: 161 RKQDYIIILGCLFNSDNTVSQMLKLRLDACLAYVGR--------QKFLYHHIPILIVSGA 212
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ---GKNII 177
+ +E+ V L G+ + I E Q+ +T N +S +I+ +Q +I
Sbjct: 213 ATVENSECSEADVMAQYLKSQGIPEEKIWREDQATNTHGNFAYSKQLIERIQPVKSAHIA 272
Query: 178 LVSSAYHLKRSQLY 191
++SA+HL RSQLY
Sbjct: 273 FITSAFHLYRSQLY 286
>gi|90421278|ref|ZP_01229163.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90334463|gb|EAS48266.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 211
Score = 39.7 bits (91), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ D + L+ ++ DTF+NA F+ + + G+ +LV+SA H+ R+ F+ G +
Sbjct: 129 GLAPDRLLLDGRARDTFENAVFAKELAQPKPGEVWVLVTSASHMPRAVGCFRVAGFDIVP 188
Query: 202 SCSDY 206
DY
Sbjct: 189 YPVDY 193
>gi|160914657|ref|ZP_02076871.1| hypothetical protein EUBDOL_00664 [Eubacterium dolichum DSM 3991]
gi|158433197|gb|EDP11486.1| hypothetical protein EUBDOL_00664 [Eubacterium dolichum DSM 3991]
Length = 255
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 102 RLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL ++ H + T I+SGG ++E+ + L+ G+ + I E S TF+
Sbjct: 126 RLDEAIAYHKQYQDTTFIVSGGQGINESISEAEAMRSYLVAHGIPQHQIIEEELSTSTFE 185
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRS-----QLYFQHFGINTKASCSDY 206
N FS IK+ + + + ++++++H+ R+ Q Q GI K+ Y
Sbjct: 186 NFAFSKEYIKD-KTQKVGVITNSFHMLRALILARQQDLQAVGIPAKSDLLTY 236
>gi|116512584|ref|YP_811491.1| hypothetical protein LACR_1892 [Lactococcus lactis subsp. cremoris
SK11]
gi|116108238|gb|ABJ73378.1| hypothetical protein LACR_1892 [Lactococcus lactis subsp. cremoris
SK11]
Length = 361
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 102 RLYKSCKQHSMHCTIII-SGGDPQKHGLAESIV---YNNKLLESGVERDDIKLETQSLDT 157
R+ + K + TI+ SGG L+E Y ++L +ER LE QS T
Sbjct: 207 RILAAVKAVRDNETILFFSGGQGPDEKLSEVRAMQKYAVEVLGFPIERT--MLEDQSRTT 264
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
++N FSS +IK + + +S YH+ R+ L+ I+ + YY +
Sbjct: 265 YENLVFSSRLIK----EKFMFFTSDYHVFRAALFAATLKIDAQGGKGGKTAMYYRVPAFI 320
Query: 218 ANFYLTELALK----EYIGILIAYY 238
F K +++GI++A++
Sbjct: 321 REFIAVMNYEKRKHIKWVGIIVAFF 345
>gi|228474759|ref|ZP_04059490.1| conserved hypothetical protein [Staphylococcus hominis SK119]
gi|228271422|gb|EEK12790.1| conserved hypothetical protein [Staphylococcus hominis SK119]
Length = 185
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 99 ETMRLYKSC---KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
ET++ +C K+ + II+SGG P +G ++ L++ V+ DI E S
Sbjct: 47 ETIKRLATCLKAKKQNEKAYIIVSGGRPV-NGNTQANEMKKWLIQHCVKEKDIITEQNSS 105
Query: 156 DTFQNAQFSSSMIKNMQGKN-IILVSSAYHLKRSQLYFQHFGINTKAS 202
DT +NA + I + +G N + L++S H++R+ L F+ N K +
Sbjct: 106 DTIENA-IETLKIADKRGFNSLSLITSGDHVRRATLIFEKLDKNIKVN 152
>gi|285017167|ref|YP_003374878.1| hypothetical protein XALc_0349 [Xanthomonas albilineans GPE PC73]
gi|283472385|emb|CBA14890.1| hypothetical protein XALc_0349 [Xanthomonas albilineans]
Length = 204
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 11/143 (7%)
Query: 69 IVLLGNGTTIIPT-------IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
IV +G+ P A +PS RI + LY+ T+I +GG
Sbjct: 35 IVWVGDRDQAAPADAIIVLGAAAYDAKPSPVFEERIRHALDLYR----RGYAPTLIFTGG 90
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
AE+ V L GV D + +ET S T QN + +++ + +I+VS
Sbjct: 91 FGNGARFAEAQVARRYALRQGVPADAVLIETISRTTRQNLIQARQIMRAHGLRRVIVVSD 150
Query: 182 AYHLKRSQLYFQHFGINTKASCS 204
H+ R+ + I+ AS +
Sbjct: 151 PLHMARALRLCRELQIDALASST 173
>gi|262370433|ref|ZP_06063759.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262314775|gb|EEY95816.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 370
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 20/136 (14%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK-QHSMHCTIIISGGDPQK 125
N IV+LG G T+ R + Y+R +RL + + + I++SG
Sbjct: 205 NAIVVLGGGLTLDKN----RKDIVVNEYTR----LRLETTLQVEQQFKLPIVLSG----- 251
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYH 184
E+ L GV D LE +S++T +N++FSS +++ G +IL++ YH
Sbjct: 252 ---VEAPYMQRWLKARGV--DAKLLEDRSMNTCENSRFSSLLLQKKGGAPRVILITDQYH 306
Query: 185 LKRSQLYFQHFGINTK 200
+ R++ F GI T+
Sbjct: 307 MPRTRRLFALNGIETQ 322
>gi|118443232|ref|YP_877657.1| hypothetical protein NT01CX_1576 [Clostridium novyi NT]
gi|118133688|gb|ABK60732.1| conserved protein [Clostridium novyi NT]
Length = 253
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+ II+SGG + E+ L+ +G+ + I E +S T +N ++SS +I++M+
Sbjct: 131 NTKIIVSGGKGPGESITEAEAMRRYLVSNGICDNQIIKEEKSRTTAENFKYSSKIIRSME 190
Query: 173 GK---NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ +V++ +H+ R+++ + G+ + S I + N+Y+ E
Sbjct: 191 NGRTPTVSVVTTNFHMLRAKMLAKRSGLVVQEVVSK------GHISSAPNYYVRE 239
>gi|312138245|ref|YP_004005581.1| integral membrane protein [Rhodococcus equi 103S]
gi|325674847|ref|ZP_08154534.1| hypothetical protein HMPREF0724_12316 [Rhodococcus equi ATCC 33707]
gi|311887584|emb|CBH46896.1| putative integral membrane protein [Rhodococcus equi 103S]
gi|325554433|gb|EGD24108.1| hypothetical protein HMPREF0724_12316 [Rhodococcus equi ATCC 33707]
Length = 220
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II++GG PQ G+ E+ L+ +G+ I E S T +NA ++ ++
Sbjct: 128 IIVTGGVPQS-GVTEAQAMRQWLVANGIPAFRITEENTSRSTVENAVNTNRILAGRAASG 186
Query: 176 IILVSSAYHLKRSQLYFQ 193
++V+S HL+R+ + F+
Sbjct: 187 AVVVTSPDHLQRAMVDFR 204
>gi|326940847|gb|AEA16743.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 210
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LY++ II +GG + L E+ ++ GV+ +D
Sbjct: 61 KPSPVFKERINHAISLYRNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKEED 116
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + + +VS H+KR+ +H IN +A S
Sbjct: 117 ILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 174
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 175 TSAYKTLDTEIPFFFKEL 192
>gi|161508196|ref|YP_001578167.1| hypothetical protein lhv_2072 [Lactobacillus helveticus DPC 4571]
gi|160349185|gb|ABX27859.1| hypothetical protein lhv_2072 [Lactobacillus helveticus DPC 4571]
Length = 367
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 60 PQWKKDGNIIVL---LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P+ K +IVL L NG + + A RI + Q YS R Y+ ++ + I
Sbjct: 173 PRRYKQDYLIVLGAGLINGDRVSKLLAA-RINRAIQ-YSN-----RQYQKGRKRPI---I 222
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKN 175
I+SGG + E++ + G++ + + +E +S +T+QN FS + K+ N
Sbjct: 223 IMSGGQGPDEKIPEAVAMAKFARKRGIKTNHLLIEDKSKNTYQNMLFSKRLATKDFGSSN 282
Query: 176 I--ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
S+ YH+ R+ L + G+ + + +YL ++E+ G+
Sbjct: 283 FRSTFFSNNYHIFRAALLAKEVGLKANGVGA-----------FTRLYYLPNAIIREFAGV 331
Query: 234 LI 235
+
Sbjct: 332 FV 333
>gi|229018413|ref|ZP_04175281.1| hypothetical protein bcere0030_29410 [Bacillus cereus AH1273]
gi|229024642|ref|ZP_04181087.1| hypothetical protein bcere0029_29550 [Bacillus cereus AH1272]
gi|228736707|gb|EEL87257.1| hypothetical protein bcere0029_29550 [Bacillus cereus AH1272]
gi|228742893|gb|EEL93025.1| hypothetical protein bcere0030_29410 [Bacillus cereus AH1273]
Length = 210
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 61 KPSPVFKERINHAISLYKNGNIKK----IIFTGGTKFEAELEEARTARVYAMKHGVKEED 116
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T N + + + + +VS H+KR+ +H I AS +
Sbjct: 117 ILIETKSLFTEDNLKNAKQVGIENGIRTYTIVSDPLHMKRAMRIAKHIKIEAYASPTP-- 174
Query: 208 NAYYSIIPLSANFYLTELALKEYIG 232
+ Y + F+ EL YIG
Sbjct: 175 TSAYKTLDTEIPFFFKELC--SYIG 197
>gi|260101969|ref|ZP_05752206.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|260084229|gb|EEW68349.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
Length = 309
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 25/150 (16%)
Query: 69 IVLLGNGT---TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+V+LG G T+ P + A RI + +Y Q + +I+SGG
Sbjct: 143 VVVLGAGIMGKTVTPLLAA-----------RITRGIEIY----QKNPGSKLIMSGGQGPG 187
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ E+ + G+ ++DI +E +S T +N +FS +++K +V+++YH+
Sbjct: 188 EDILEAEAMAEYAINLGIPKEDIIIENKSRTTNENLRFSYALMK--PNSKFCIVTNSYHV 245
Query: 186 KRSQLY-----FQHFGINTKASCSDYLNAY 210
R+ + Q G K LNA+
Sbjct: 246 YRALVLAKRQGLQCIGYGAKTKWYFTLNAF 275
>gi|228940198|ref|ZP_04102769.1| hypothetical protein bthur0008_28470 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228973089|ref|ZP_04133681.1| hypothetical protein bthur0003_28520 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228979696|ref|ZP_04140020.1| hypothetical protein bthur0002_28700 [Bacillus thuringiensis Bt407]
gi|228780009|gb|EEM28252.1| hypothetical protein bthur0002_28700 [Bacillus thuringiensis Bt407]
gi|228786648|gb|EEM34635.1| hypothetical protein bthur0003_28520 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228819324|gb|EEM65378.1| hypothetical protein bthur0008_28470 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 219
Score = 39.3 bits (90), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II +GG + L E+ ++ GV+ +DI +ET+SL T +N + + + +
Sbjct: 94 IIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIQT 153
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTEL 225
+VS H+KR+ +H IN +A S + Y + F+ EL
Sbjct: 154 YTIVSDPLHMKRAMRIAKH--INIEAYASPTPTSAYKTLDTEIPFFFKEL 201
>gi|160913536|ref|ZP_02076227.1| hypothetical protein EUBDOL_00012 [Eubacterium dolichum DSM 3991]
gi|158434088|gb|EDP12377.1| hypothetical protein EUBDOL_00012 [Eubacterium dolichum DSM 3991]
Length = 185
Score = 39.3 bits (90), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 51 FSYQR-PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ Y R PL Q + ++ ++LG+ + ++ I+ + R+ + LY Q
Sbjct: 16 YPYHRFPLYIQQTHQGYDVCIVLGSPSNTDGSLSRIQKQ-------RMDHAITLY----Q 64
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
I+ISG + E+ V + + V DI LE + +T++N ++++ +
Sbjct: 65 KGSIQKILISGA-AVANCFIEAEVMKDYAIAQNVPEKDILLEKYAKNTYENLKYAADLCN 123
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHF 195
I+V+S +H++R+ + Q F
Sbjct: 124 KHHFSKTIIVTSGFHIRRAGFFAQKF 149
>gi|319442395|ref|ZP_07991551.1| protein [Corynebacterium variabile DSM 44702]
Length = 196
Score = 39.3 bits (90), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG Q E+ + L E GV + + +E +S T N Q + SMI + G
Sbjct: 107 VIVSGGATQTDCPTEAAAMESGLHERGVT-NQVLIEDESDSTVANVQNTKSMISDRGGLA 165
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKA 201
+++ SS ++++ Q F+ GI A
Sbjct: 166 VVVTSSPHNVRALQ-NFRDAGIEAVA 190
>gi|331090798|ref|ZP_08339645.1| hypothetical protein HMPREF9477_00288 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330399906|gb|EGG79565.1| hypothetical protein HMPREF9477_00288 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 241
Score = 39.3 bits (90), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+ +I+SGG + + E+ N LL+ G++ I +E +S T +N ++S I + +
Sbjct: 124 NTKVIVSGGQGKGEDVTEAFAMKNYLLDKGIDGKRIIMEEKSHSTEENLKYSLQYITDTK 183
Query: 173 GKNIILVSSAYHLKRS 188
K + +V++ +H+ R
Sbjct: 184 EK-VGIVTNNFHVYRG 198
>gi|23100336|ref|NP_693803.1| hypothetical protein OB2881 [Oceanobacillus iheyensis HTE831]
gi|22778568|dbj|BAC14837.1| hypothetical protein [Oceanobacillus iheyensis HTE831]
Length = 436
Score = 39.3 bits (90), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
++++GG +K+G E ++ L++ G+ D I +E +S +T +NA S ++ N Q ++
Sbjct: 140 VLVTGG-VEKNGWTEGDRMHDWLVDHGLSEDRIIVENESSNTVENASNSFEILYN-QYED 197
Query: 176 II---LVSSAYHLKRSQLYF 192
I +++S YHLKRS +++
Sbjct: 198 IDSFSMITSQYHLKRSSIFY 217
>gi|170016501|ref|YP_001727420.1| hypothetical protein LCK_00143 [Leuconostoc citreum KM20]
gi|169803358|gb|ACA81976.1| Uncharacterized conserved protein [Leuconostoc citreum KM20]
Length = 188
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNN-KLLESGVERDDIKLETQSLDTFQNAQFS 164
K S++ II SGG + ++E+ + +L V +LE +S +T+QN ++S
Sbjct: 49 DAKLMSIYPIIIFSGGQGEDELVSEAKAMRDWAILTYQVPISKTRLEDKSRNTYQNIKYS 108
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
+ ++KN + +S YH+ R+ L Q + + D + Y
Sbjct: 109 NQLLKN---QAFTFYTSDYHVFRAVLLAQKQNVQAQGRGGDVVWRY 151
>gi|146279502|ref|YP_001169660.1| H+/gluconate symporter and related permease-like protein
[Rhodobacter sphaeroides ATCC 17025]
gi|145557743|gb|ABP72355.1| H+/gluconate symporter and related permease-like protein
[Rhodobacter sphaeroides ATCC 17025]
Length = 187
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
S + + LYKS + ++ISG G E Y + L++GV + LE +
Sbjct: 35 SSLHPAIALYKS----GLTPKLLISGAGVAVDGSTEWSFYRDHALDAGVAESALLLEKAA 90
Query: 155 LDTFQNAQFSSSMIKNMQG----KNIILVSSAYHLKRS 188
+T +NA F +++I+ G +++ + + +H++R+
Sbjct: 91 RNTAENAAFGAAVIEKELGWAKVRSLAVCAKPFHMRRA 128
>gi|229838045|ref|ZP_04458204.1| putative exported protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229694411|gb|EEO84458.1| putative exported protein [Yersinia pestis biovar Orientalis str.
PEXU2]
Length = 375
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 102 RLYKSCK--QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL K+ + Q II++GG PQ + E + + L++ G++ + I + + T +
Sbjct: 225 RLEKTLEIAQQLPDALIIVTGGVPQNNQ-TEGKLMADWLIKKGIKPERIYQDNYARSTVE 283
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
NA +S + + KN I++SS H++R+ F
Sbjct: 284 NALYSRYALAKHRIKNAIIISSGSHVRRADALF 316
>gi|331002899|ref|ZP_08326412.1| hypothetical protein HMPREF0491_01274 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413192|gb|EGG92566.1| hypothetical protein HMPREF0491_01274 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 268
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
TIIISGG +K + ES+ + L+E GV+ ++I +ET+S +T +N +S ++I
Sbjct: 126 DTTIIISGG-LRKEEIIESLEMADYLIERGVDANNILVETESHNTRENLIYSKALID 181
>gi|319776039|ref|YP_004138527.1| hypothetical protein HICON_13870 [Haemophilus influenzae F3047]
gi|319896847|ref|YP_004135042.1| hypothetical protein HIBPF05050 [Haemophilus influenzae F3031]
gi|329123197|ref|ZP_08251766.1| hypothetical protein HMPREF9095_0984 [Haemophilus aegyptius ATCC
11116]
gi|317432351|emb|CBY80706.1| conserved hypothetical protein [Haemophilus influenzae F3031]
gi|317450630|emb|CBY86850.1| conserved hypothetical protein [Haemophilus influenzae F3047]
gi|327471542|gb|EGF16986.1| hypothetical protein HMPREF9095_0984 [Haemophilus aegyptius ATCC
11116]
Length = 247
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT-KASCSDYLN 208
+E ++ +T +NA F+ +++ + IILV++ +H+KR++ F+ G + A+ ++Y +
Sbjct: 152 IENKARNTEENASFTKNILIKDHIQKIILVTNQWHMKRAKYLFEKQGFDVLPAAAANYGS 211
Query: 209 ----AYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ S IP + LKE+IG A+Y
Sbjct: 212 KGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAHY 245
>gi|42519856|ref|NP_965786.1| hypothetical protein LJ1807 [Lactobacillus johnsonii NCC 533]
gi|41584146|gb|AAS09752.1| hypothetical protein LJ_1807 [Lactobacillus johnsonii NCC 533]
Length = 373
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 18/127 (14%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK- 174
+I+SGG + L+E+ + ++ G + + I LE +S +T+QN +S + + G
Sbjct: 228 LIMSGGQGKDEDLSEAAAMKDYAVKHGYDPNLILLEDKSTNTYQNMLYSKKVATSDWGNP 287
Query: 175 --NIILVSSAYHLKRSQLY--FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
++ YHL R+ LY H N + + + ++L ++E+
Sbjct: 288 NFKAKFFTNNYHLFRAGLYAKMAHLKANGVGATTRF-------------YFLPNATIREF 334
Query: 231 IGILIAY 237
G+ I +
Sbjct: 335 AGVFIMH 341
>gi|22125571|ref|NP_668994.1| hypothetical protein y1676 [Yersinia pestis KIM 10]
gi|45442116|ref|NP_993655.1| hypothetical protein YP_2326 [Yersinia pestis biovar Microtus str.
91001]
gi|51596866|ref|YP_071057.1| hypothetical protein YPTB2547 [Yersinia pseudotuberculosis IP
32953]
gi|108807998|ref|YP_651914.1| hypothetical protein YPA_2003 [Yersinia pestis Antiqua]
gi|108812268|ref|YP_648035.1| hypothetical protein YPN_2106 [Yersinia pestis Nepal516]
gi|145599203|ref|YP_001163279.1| hypothetical protein YPDSF_1923 [Yersinia pestis Pestoides F]
gi|149365580|ref|ZP_01887615.1| putative exported protein [Yersinia pestis CA88-4125]
gi|153948076|ref|YP_001400474.1| hypothetical protein YpsIP31758_1496 [Yersinia pseudotuberculosis
IP 31758]
gi|162421029|ref|YP_001606261.1| hypothetical protein YpAngola_A1772 [Yersinia pestis Angola]
gi|165925576|ref|ZP_02221408.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165937616|ref|ZP_02226178.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166008093|ref|ZP_02228991.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213796|ref|ZP_02239831.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398638|ref|ZP_02304162.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422234|ref|ZP_02313987.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426954|ref|ZP_02318707.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167466398|ref|ZP_02331102.1| hypothetical protein YpesF_00560 [Yersinia pestis FV-1]
gi|170023842|ref|YP_001720347.1| hypothetical protein YPK_1601 [Yersinia pseudotuberculosis YPIII]
gi|186895947|ref|YP_001873059.1| hypothetical protein YPTS_2642 [Yersinia pseudotuberculosis PB1/+]
gi|218929600|ref|YP_002347475.1| hypothetical protein YPO2511 [Yersinia pestis CO92]
gi|229895244|ref|ZP_04510418.1| putative exported protein [Yersinia pestis Pestoides A]
gi|229898605|ref|ZP_04513750.1| putative exported protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229902604|ref|ZP_04517721.1| putative exported protein [Yersinia pestis Nepal516]
gi|270490215|ref|ZP_06207289.1| tetratricopeptide repeat protein [Yersinia pestis KIM D27]
gi|294504263|ref|YP_003568325.1| hypothetical protein YPZ3_2153 [Yersinia pestis Z176003]
gi|21958474|gb|AAM85245.1|AE013770_11 hypothetical [Yersinia pestis KIM 10]
gi|45436979|gb|AAS62532.1| putative exported protein [Yersinia pestis biovar Microtus str.
91001]
gi|51590148|emb|CAH21785.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
gi|108775916|gb|ABG18435.1| hypothetical protein YPN_2106 [Yersinia pestis Nepal516]
gi|108779911|gb|ABG13969.1| hypothetical protein YPA_2003 [Yersinia pestis Antiqua]
gi|115348211|emb|CAL21139.1| putative exported protein [Yersinia pestis CO92]
gi|145210899|gb|ABP40306.1| hypothetical protein YPDSF_1923 [Yersinia pestis Pestoides F]
gi|149291993|gb|EDM42067.1| putative exported protein [Yersinia pestis CA88-4125]
gi|152959571|gb|ABS47032.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
31758]
gi|162353844|gb|ABX87792.1| conserved hypothetical protein [Yersinia pestis Angola]
gi|165914366|gb|EDR32981.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165922685|gb|EDR39836.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165992475|gb|EDR44776.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204970|gb|EDR49450.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958740|gb|EDR55761.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167051142|gb|EDR62550.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054056|gb|EDR63884.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169750376|gb|ACA67894.1| protein of unknown function DUF218 [Yersinia pseudotuberculosis
YPIII]
gi|186698973|gb|ACC89602.1| protein of unknown function DUF218 [Yersinia pseudotuberculosis
PB1/+]
gi|229680051|gb|EEO76150.1| putative exported protein [Yersinia pestis Nepal516]
gi|229688153|gb|EEO80224.1| putative exported protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229701730|gb|EEO89755.1| putative exported protein [Yersinia pestis Pestoides A]
gi|262362382|gb|ACY59103.1| hypothetical protein YPD4_2196 [Yersinia pestis D106004]
gi|262366310|gb|ACY62867.1| hypothetical protein YPD8_2190 [Yersinia pestis D182038]
gi|270338719|gb|EFA49496.1| tetratricopeptide repeat protein [Yersinia pestis KIM D27]
gi|294354722|gb|ADE65063.1| hypothetical protein YPZ3_2153 [Yersinia pestis Z176003]
gi|320014659|gb|ADV98230.1| putative exported protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 375
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 102 RLYKSCK--QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL K+ + Q II++GG PQ + E + + L++ G++ + I + + T +
Sbjct: 225 RLEKTLEIAQQLPDALIIVTGGVPQNNQ-TEGKLMADWLIKKGIKPERIYQDNYARSTVE 283
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
NA +S + + KN I++SS H++R+ F
Sbjct: 284 NALYSRYALAKHRIKNAIIISSGSHVRRADALF 316
>gi|94264714|ref|ZP_01288494.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93454823|gb|EAT05073.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 78
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL-----SANFYLTELALK 228
+ ++LV+SA H+ RS F+ GIN + +D+ + PL + + + + ALK
Sbjct: 5 RPVLLVTSAQHMPRSLATFRAVGINAVPAPADFEVIPQPLHPLRLLPDAHSLHQSTSALK 64
Query: 229 EYIGILIAYYRG 240
EY+G+L+ RG
Sbjct: 65 EYLGLLVYRLRG 76
>gi|120599528|ref|YP_964102.1| hypothetical protein Sputw3181_2731 [Shewanella sp. W3-18-1]
gi|120559621|gb|ABM25548.1| protein of unknown function DUF218 [Shewanella sp. W3-18-1]
Length = 231
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSM--HCTIIISGGDPQKHGLAESIVYNNKLLESG 142
I+ + QS S + RL + +Q + C +I+SG + ++ + + +E G
Sbjct: 76 IQAATAVQSLSAV-ALARLSEGIRQLGLGQDCILIVSGWGGELTQISHAEMMAKAAVELG 134
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V++ I + DT + AQ+ + + + LV+SA H+ R+ F G+ A+
Sbjct: 135 VDKIKIIQFPLARDTLEEAQY---LKWELGDSSFRLVTSASHMPRAMAIFTGKGLLASAA 191
Query: 203 CSDYLNAYYSIIPLSA-NFYLTELALKEYIGIL 234
+D+ L+A N ++ A+ EYIG L
Sbjct: 192 PTDFRARDDFWWRLTADNLVSSQRAIHEYIGRL 224
>gi|256394876|ref|YP_003116440.1| hypothetical protein Caci_5741 [Catenulispora acidiphila DSM 44928]
gi|256361102|gb|ACU74599.1| protein of unknown function DUF88 [Catenulispora acidiphila DSM
44928]
Length = 435
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG--INTK 200
V RDD K E + +DTF +A + + + +++LVS L + Q +G I+
Sbjct: 88 VRRDDGKFEQKGVDTFLHADL-TGLARKRAVADVVLVSGDEDLLHAVEEAQEYGTRIHLW 146
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ SDY + I + + L+E LK Y+ + + G
Sbjct: 147 GAASDYNQSLELIAAVDKSMTLSEEWLKPYVWVKVPIGHGE 187
>gi|227889206|ref|ZP_04007011.1| integral membrane protein [Lactobacillus johnsonii ATCC 33200]
gi|227850435|gb|EEJ60521.1| integral membrane protein [Lactobacillus johnsonii ATCC 33200]
Length = 373
Score = 38.9 bits (89), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG + L+E+ + ++ G + + I LE +S +T+QN +S + + G +
Sbjct: 228 LIMSGGQGKDEDLSEAAAMKDYAVKHGYDSNLILLEDKSTNTYQNMLYSKKVAISDWGNS 287
Query: 176 II---LVSSAYHLKRSQLY--FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
++ YHL R+ LY H N + + + ++L ++E+
Sbjct: 288 KFKAKFFTNNYHLFRAGLYAKMAHLKANGVGATTRF-------------YFLPNATIREF 334
Query: 231 IGILIAY 237
G+ I +
Sbjct: 335 AGVFIMH 341
>gi|294789429|ref|ZP_06754666.1| putative periplasmic protein [Simonsiella muelleri ATCC 29453]
gi|294482642|gb|EFG30332.1| putative periplasmic protein [Simonsiella muelleri ATCC 29453]
Length = 224
Score = 38.9 bits (89), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 18/153 (11%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+++PL PQ + +V+LG P +R RI ++LY+ QH++
Sbjct: 36 HEKPL--PQ---KADAVVVLGAAAWGNNPSPVLR--------ERINYGIKLYQ---QHTV 79
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
+I +GG P+ E+ V ++ V + DI L+T+S T++N + +++ N
Sbjct: 80 Q-KMIFTGGTPKFGYPTEAEVAQRYAMQKFNVPQRDIILDTESSSTYENLTNTRTLMHNH 138
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
++I+VS HL R+ + GI S +
Sbjct: 139 HLDSVIIVSDPDHLARAAAMARALGITANVSAT 171
>gi|291522028|emb|CBK80321.1| Uncharacterized conserved protein [Coprococcus catus GD/7]
Length = 195
Score = 38.9 bits (89), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLK 186
AE+ + L+++GV + I E ++ T +NA++ M+ K++ K I+ A+H +
Sbjct: 78 AEADFLTDVLMQAGVPGEAILQEREATFTLENAEYIRKMLEEKHLPIKRAIICCQAFHAR 137
Query: 187 RSQLYFQH 194
R ++YF++
Sbjct: 138 RCRMYFEY 145
>gi|254360531|ref|ZP_04976680.1| hypothetical protein MHA_0080 [Mannheimia haemolytica PHL213]
gi|153091071|gb|EDN73076.1| hypothetical protein MHA_0080 [Mannheimia haemolytica PHL213]
Length = 715
Score = 38.9 bits (89), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 76 TTIIPTIPAI---RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
TT+IP A+ P + + + K + + II+SGG P ++ AE+
Sbjct: 200 TTMIPDTIAVFGQSPNPDGTPSKGLLQRLEKTKEMAEKFPNAKIILSGG-PVRYIYAEAD 258
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
V L+E+GV+ + L+ + DT NA +K G+ ++ + + HL R+
Sbjct: 259 VMKKWLIENGVDESRLLLDDVARDTPGNAVGIIDFMKEYGGRKVLGIGTILHLPRA 314
>gi|78045108|ref|YP_360909.1| hypothetical protein CHY_2090 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77997223|gb|ABB16122.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 203
Score = 38.9 bits (89), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+++SGG + S++ + L+ GV + LE+ S +T++N ++++ + K
Sbjct: 82 LLLSGGSFTREPKDASLM-AKEALKKGVPAPALLLESSSENTYENVLLTANIYYQNRWKR 140
Query: 176 IILVSSAYHLKRSQLYFQHFGINT 199
I++V+SAYH R + + G+N
Sbjct: 141 ILVVTSAYHTLRVKKMYNDRGVNA 164
>gi|229011030|ref|ZP_04168224.1| hypothetical protein bmyco0001_14820 [Bacillus mycoides DSM 2048]
gi|229166553|ref|ZP_04294306.1| hypothetical protein bcere0007_15250 [Bacillus cereus AH621]
gi|228616957|gb|EEK74029.1| hypothetical protein bcere0007_15250 [Bacillus cereus AH621]
gi|228750202|gb|EEM00034.1| hypothetical protein bmyco0001_14820 [Bacillus mycoides DSM 2048]
Length = 159
Score = 38.9 bits (89), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ ++ + SYS + + + K H I+SGG +
Sbjct: 6 DADYIIVLGS-----------KVNGTKPSYSLQYRIDKAAEYLKLHD-KTIAIVSGGQGK 53
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E++ L++ + D I +E +S T +N +FS +I K +I V++ +H
Sbjct: 54 GEDITEALAMKQGLMKQNIAEDRIIMEDKSTSTDENIKFSKPLIPANMKKGMI-VTNDFH 112
Query: 185 LKRSQ 189
+ R++
Sbjct: 113 MFRAK 117
>gi|313897329|ref|ZP_07830872.1| conserved hypothetical protein [Clostridium sp. HGF2]
gi|312957699|gb|EFR39324.1| conserved hypothetical protein [Clostridium sp. HGF2]
Length = 192
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/161 (19%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
PQ + ++ ++LG+ ++ ++ +R+ + LYK + + C I+IS
Sbjct: 28 PQSDRVYDVAIVLGSPAEEDGSLSRVQ-------KTRMDAAITLYK---EKRVRC-ILIS 76
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG ++ E+ + + + + LE Q+ +T++N ++ ++ K++I+V
Sbjct: 77 GGS-VRNTYTEADIMAAYAIRCSIPSTALLLERQAKNTYENLLYAKTLCDAHAWKHVIVV 135
Query: 180 SSAYHLKRSQLYFQHF-------GINTKASCSDYLNAYYSI 213
+S +H++R+ + F K C Y+ Y+ +
Sbjct: 136 TSCFHVRRASYMVRKFFDDYVMQKTAEKEKCRHYITEYFHM 176
>gi|260223391|emb|CBA33910.1| hypothetical protein Csp_B21400 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 256
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
++ E +S +T++NA ++ + +L++SA+H+ RS F+ G N A DY
Sbjct: 159 VRYEAESRNTYENAVLTAKLPGVNPQDRWLLMTSAWHMPRSMATFEKAGWNVTAYPVDY 217
>gi|210608912|ref|ZP_03288049.1| hypothetical protein CLONEX_00228 [Clostridium nexile DSM 1787]
gi|210152829|gb|EEA83835.1| hypothetical protein CLONEX_00228 [Clostridium nexile DSM 1787]
Length = 248
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 40/73 (54%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG + + E+ L G++ + I LE +S T++N + S + I + +
Sbjct: 127 VIVSGGRGKGEDITEAEAMAEYLENCGIDANRICLEEKSTSTYENLKKSLAFIDDERRDK 186
Query: 176 IILVSSAYHLKRS 188
I +V++ +H+ R+
Sbjct: 187 IGIVTNNFHIYRA 199
>gi|218898164|ref|YP_002446575.1| hypothetical protein BCG9842_B2141 [Bacillus cereus G9842]
gi|218541554|gb|ACK93948.1| conserved hypothetical protein [Bacillus cereus G9842]
Length = 210
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LY++ II +GG + L E+ ++ GV+ +D
Sbjct: 61 KPSPVFKERINHAISLYRNGNIKK----IIFTGGTKFEAELEEARTARVYAMKQGVKEED 116
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +ET+SL T +N + + + +VS H+KR+ +H IN +A S
Sbjct: 117 ILIETKSLFTEENLKNAKQVGIENGIHTYTIVSDPLHMKRAMRIAKH--INIEAYASPTP 174
Query: 208 NAYYSIIPLSANFYLTEL 225
+ Y + F+ EL
Sbjct: 175 TSAYKTLDTEIPFFFKEL 192
>gi|269964995|ref|ZP_06179160.1| hypothetical protein VMC_05900 [Vibrio alginolyticus 40B]
gi|269830298|gb|EEZ84523.1| hypothetical protein VMC_05900 [Vibrio alginolyticus 40B]
Length = 118
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+E G+ +D I E + T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 5 LIEKGISKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFE 60
>gi|229132528|ref|ZP_04261378.1| hypothetical protein bcere0014_14610 [Bacillus cereus BDRD-ST196]
gi|228650965|gb|EEL06950.1| hypothetical protein bcere0014_14610 [Bacillus cereus BDRD-ST196]
Length = 159
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ ++ + SYS + + + K H I+SGG +
Sbjct: 6 DADYIIVLGS-----------KVNGTQPSYSLQYRIDKAAEYLKLHD-KTIAIVSGGQGK 53
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E++ L++ + D I +E +S T +N +FS +I K +I V++ +H
Sbjct: 54 GEDITEALAMKQGLMKQNIAEDRIIMEDKSTSTDENIKFSKPLIPANMKKGMI-VTNDFH 112
Query: 185 LKRSQ 189
+ R++
Sbjct: 113 MFRAK 117
>gi|291166939|gb|EFE28985.1| membrane protein [Filifactor alocis ATCC 35896]
Length = 198
Score = 38.5 bits (88), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
++I++GG E+ + L+ G+ ++ I +ET S TF+N + ++ +I+
Sbjct: 77 SVIVTGGQGTDEDCTEAQASYDYLVAHGIAKNRILMETTSTTTFENIRNATDIIRKQTDN 136
Query: 175 ---NIILVSSAYHLKRSQLYFQHFGINTKASCSD---------YLNAYYSIIPLSANFYL 222
+++ ++ +H R++L + G+ + S YL Y++II +F+L
Sbjct: 137 PSVKVLISTNRFHCIRAELLAKRCGLTAYSLPSKTPPSITIPCYLREYFAII---KSFFL 193
Query: 223 TELA 226
L
Sbjct: 194 DTLT 197
>gi|307353054|ref|YP_003894105.1| hypothetical protein Mpet_0899 [Methanoplanus petrolearius DSM
11571]
gi|307156287|gb|ADN35667.1| protein of unknown function DUF218 [Methanoplanus petrolearius DSM
11571]
Length = 182
Score = 38.5 bits (88), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 116 IIISGGDPQKH-GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG- 173
+++SGG + E + + + GV+ +I E SLDT NA FS ++ +
Sbjct: 44 LLLSGGRSNPEIDVPECGIMKDYAVGRGVDPSNIITEDSSLDTIGNAVFSREIVDKLDAV 103
Query: 174 KNIILVSSAYHLKRSQLYFQ 193
I +++S YH++RS+ F
Sbjct: 104 SKIFVITSCYHVERSRYLFD 123
>gi|294650259|ref|ZP_06727628.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292823851|gb|EFF82685.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 373
Score = 38.5 bits (88), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 23/141 (16%)
Query: 64 KDGN---IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK-QHSMHCTIIIS 119
KD N IV+LG G T+ I + +Y+R +RL ++ + + + I++S
Sbjct: 202 KDTNQPYAIVVLGGGLTLGANGKDIVV----NNYTR----LRLERTLEVEKQYNLPIVLS 253
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIIL 178
G E+ L E G++ LE +S++T +N +FSS +++ G +IL
Sbjct: 254 G--------VEAPYMQAWLEERGIKAK--LLENRSMNTCENTRFSSLLLQKKGGAPKVIL 303
Query: 179 VSSAYHLKRSQLYFQHFGINT 199
++ YH+ R++ F GI T
Sbjct: 304 ITDEYHMPRTRRLFALNGIET 324
>gi|197286351|ref|YP_002152223.1| hypothetical protein PMI2504 [Proteus mirabilis HI4320]
gi|227357403|ref|ZP_03841758.1| transporter [Proteus mirabilis ATCC 29906]
gi|194683838|emb|CAR44949.1| putative exported protein [Proteus mirabilis HI4320]
gi|227162408|gb|EEI47405.1| transporter [Proteus mirabilis ATCC 29906]
Length = 379
Score = 38.5 bits (88), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K N IV LG T+ I I+ R+ +T+ + K I+++GG P
Sbjct: 204 KGNNAIVTLGYALNPDGTMNQILID-------RLNKTLEVAKQLP----DAMIVVTGGVP 252
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ H E + + L++ G+ + I + + T +NA FS + + K +++SS
Sbjct: 253 KAHQ-TEGKLMADWLVKKGIPAERIFQDNYARSTVENALFSRYALTKHRIKTAVIISSGS 311
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
H++R+ F + S YL PL+
Sbjct: 312 HVRRADAIFTVASWQSGPSDITYLTVVAPDKPLA 345
>gi|268320221|ref|YP_003293877.1| hypothetical protein FI9785_1759 [Lactobacillus johnsonii FI9785]
gi|262398596|emb|CAX67610.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus
johnsonii FI9785]
Length = 373
Score = 38.5 bits (88), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG + L+E+ + ++ G + + I LE +S +T+QN +S + + G +
Sbjct: 228 LIMSGGQGKDEDLSEAAAMKDYAVKHGYDPNLILLEDKSTNTYQNMLYSKKVAISDWGNS 287
Query: 176 II---LVSSAYHLKRSQLY--FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
++ YHL R+ LY H N + + + ++L ++E+
Sbjct: 288 KFKAKFFTNNYHLFRAGLYAKMAHLKANGVGATTRF-------------YFLPNATIREF 334
Query: 231 IGILIAY 237
G+ I +
Sbjct: 335 AGVFIMH 341
>gi|297538308|ref|YP_003674077.1| hypothetical protein M301_1116 [Methylotenera sp. 301]
gi|297257655|gb|ADI29500.1| protein of unknown function DUF218 [Methylotenera sp. 301]
Length = 227
Score = 38.5 bits (88), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
Q + T+++SGG + E++ G + +I LE++S T +N FS ++
Sbjct: 98 QQGLVSTLLMSGGLDYEDERIEAVTMEAHARSKGFQ-GEILLESRSSSTLENLTFSRPIL 156
Query: 169 KNMQGKNIILVSSAYHLKR 187
+ KNII+ S YH+ R
Sbjct: 157 EAADIKNIIITSEPYHMWR 175
>gi|217974034|ref|YP_002358785.1| hypothetical protein Sbal223_2876 [Shewanella baltica OS223]
gi|217499169|gb|ACK47362.1| protein of unknown function DUF218 [Shewanella baltica OS223]
Length = 233
Score = 38.5 bits (88), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 102 RLYKSCKQHSM--HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL + +Q ++ C +I+SG + ++ + + N +E GV++ I + DT +
Sbjct: 93 RLSEGVRQLNLGQECKLIVSGWGGELTQVSHAEMMVNAAVELGVDKRRIIQFPLARDTLE 152
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA- 218
AQ+ + + + LV+SA H+ R+ F ++ +A+ +D++ L+A
Sbjct: 153 EAQY---LQWELGEEPFRLVTSATHMPRAMAIFTAKDLHPEAAPTDFIGRDDFWWRLTAD 209
Query: 219 NFYLTELALKEYIGIL 234
N ++ A+ E IG L
Sbjct: 210 NLVASQRAIHECIGRL 225
>gi|257455873|ref|ZP_05621092.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
gi|257446721|gb|EEV21745.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
Length = 225
Score = 38.5 bits (88), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
E S +T QNA++++ M+ K +ILV+ AYH+ RS+ + F IN A+
Sbjct: 131 EKNSFNTCQNAKYTAEMVN---VKQVILVTDAYHMNRSR---RQFAINDVAT 176
>gi|312135433|ref|YP_004002771.1| hypothetical protein Calow_1424 [Caldicellulosiruptor owensensis
OL]
gi|311775484|gb|ADQ04971.1| protein of unknown function DUF218 [Caldicellulosiruptor owensensis
OL]
Length = 210
Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+S + KK IIVL G + P+ P F+ R+ + LYK K ++ + II
Sbjct: 46 ISAKPKKSDCIIVL---GCAVYGNFPS----PFFRE--RLNKAFELYK--KGYARY--II 92
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+ G + E+ L+ GV + + E +S T++N + ++ K+ I
Sbjct: 93 VCGAKGPGENIFEAEAGKRYLIGKGVLPEFVLKEDKSFSTYENLLHAKRIMNEKGFKSAI 152
Query: 178 LVSSAYHLKRSQLYFQHFGINTKAS 202
+VS+ +HL+R+ L + IN S
Sbjct: 153 IVSNIFHLERACLIARKLKINASFS 177
>gi|229827993|ref|ZP_04454062.1| hypothetical protein GCWU000342_00042 [Shuttleworthia satelles DSM
14600]
gi|229792587|gb|EEP28701.1| hypothetical protein GCWU000342_00042 [Shuttleworthia satelles DSM
14600]
Length = 203
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKN 175
I SGG + ++E+ L G++ + +E S +T +N S +I ++ +G +
Sbjct: 78 ICSGGQGKDEDISEAEYMKEGLTAQGIDWKRLPMERNSTNTRENLALSHRVIASLGRGDS 137
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKA 201
I+++SA+H R+ + G++ A
Sbjct: 138 AIIITSAFHCYRAVFLGRREGLHCLA 163
>gi|118580810|ref|YP_902060.1| hypothetical protein Ppro_2396 [Pelobacter propionicus DSM 2379]
gi|118503520|gb|ABL00003.1| protein of unknown function DUF218 [Pelobacter propionicus DSM
2379]
Length = 198
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ E +RL++ K H + G DP + S +Y + + + LE S
Sbjct: 50 GRVDEGVRLFRQGKGHWL----FFIGVDPT---VRRSDLYRPRPGDPPAS--GVILEKAS 100
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+T +NA + +I ++I+L++S YH+KR+ + ++
Sbjct: 101 RNTLENAVYGRDVIMERNVRSILLITSRYHMKRASILLRN 140
>gi|75764443|ref|ZP_00743940.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228901618|ref|ZP_04065796.1| hypothetical protein bthur0014_28070 [Bacillus thuringiensis IBL
4222]
gi|228908852|ref|ZP_04072684.1| hypothetical protein bthur0013_30090 [Bacillus thuringiensis IBL
200]
gi|74488069|gb|EAO51788.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228850862|gb|EEM95684.1| hypothetical protein bthur0013_30090 [Bacillus thuringiensis IBL
200]
gi|228858030|gb|EEN02512.1| hypothetical protein bthur0014_28070 [Bacillus thuringiensis IBL
4222]
Length = 219
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II +GG + L E+ ++ GV+ +DI +ET+SL T +N + + +
Sbjct: 94 IIFTGGTKFEAELEEARTARVYAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIHT 153
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTEL 225
+VS H+KR+ +H IN +A S + Y + F+ EL
Sbjct: 154 YTIVSDPLHMKRAMRIAKH--INIEAYASPTPTSAYKTLDTEIPFFFKEL 201
>gi|281490953|ref|YP_003352933.1| hypothetical protein LLKF_0463 [Lactococcus lactis subsp. lactis
KF147]
gi|281374711|gb|ADA64231.1| Hypothetical protein LLKF_0463 [Lactococcus lactis subsp. lactis
KF147]
Length = 194
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+P+ + R+ + L K+ Q II+SG ++E+ N L+ + D
Sbjct: 56 KPAKITQERLDAALLLAKNNPQ----AKIIVSGAKGADEPVSEAFSMKNYLISHHIRADR 111
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
I E ++ DT +N +S K GK +I V+S +HL R+ +H G+ +
Sbjct: 112 IISEDKAGDTAENIAYSK---KYFDGKTVI-VTSDFHLYRALYLAKHEGVKVEG 161
>gi|330829063|ref|YP_004392015.1| transporter [Aeromonas veronii B565]
gi|328804199|gb|AEB49398.1| Transporter [Aeromonas veronii B565]
Length = 367
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ T+ L K+ + II++GG PQ E + + L G++R + E +
Sbjct: 217 RLQTTLELAKADPE----ALIILTGGVPQNRK-TEGKLMADWLANHGIDRSRLIEENYAT 271
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
T NA +S+ + Q +LVSSA H++R Q +
Sbjct: 272 STVDNALYSAYALARHQIDYAVLVSSASHVRRGQTVLE 309
>gi|237733730|ref|ZP_04564211.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|229383068|gb|EEO33159.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 255
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II+SGG + E+ + L+ G++ I E +S +T +N +S +I+ ++
Sbjct: 140 IIVSGGQGHGENITEAKAMKDYLINKGIDESLIIEENKSTNTNENIIYSKKIIETSTTED 199
Query: 176 --IILVSSAYHLKRSQLYFQHFGI 197
++++++ +H RS+L G+
Sbjct: 200 YEVVIITNGFHCYRSKLLANKHGL 223
>gi|224542305|ref|ZP_03682844.1| hypothetical protein CATMIT_01484 [Catenibacterium mitsuokai DSM
15897]
gi|224524754|gb|EEF93859.1| hypothetical protein CATMIT_01484 [Catenibacterium mitsuokai DSM
15897]
Length = 210
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 116 IIISGGDPQKHGLAESIVYNNKL--LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
II++GG + + ++++ YN KL + GV DD+ E QS T +N + ++
Sbjct: 85 IIMTGGYGKGNPVSDA--YNAKLYAVSQGVPEDDVLTEDQSTVTLENLINAKKIMDVYNY 142
Query: 174 KNIILVSSAYHLKRSQLYFQHFGI 197
+ ++VS H+KR+ L + GI
Sbjct: 143 QTALIVSDPLHMKRAMLQAKDAGI 166
>gi|59713268|ref|YP_206043.1| transporter [Vibrio fischeri ES114]
gi|59481516|gb|AAW87155.1| transporter [Vibrio fischeri ES114]
Length = 364
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I+++GG P+ H E + + L+++G++ I + + T +NA +SS + +
Sbjct: 230 IVVTGGVPKNHK-TEGKLMTDWLVKNGIDASRIIEDNYARSTVENALYSSYALARHNIDH 288
Query: 176 IILVSSAYHLKRSQLYFQ 193
++SSA H++R Q F+
Sbjct: 289 ATIISSASHVRRGQALFE 306
>gi|294668207|ref|ZP_06733314.1| putative periplasmic protein [Neisseria elongata subsp. glycolytica
ATCC 29315]
gi|291309915|gb|EFE51158.1| putative periplasmic protein [Neisseria elongata subsp. glycolytica
ATCC 29315]
Length = 194
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R P F+ RI + LY+S K + T GG + ++E+ V + GV
Sbjct: 40 RPSPVFRE--RINHAIVLYQSGKVRKLAFT----GGAIKPGFMSEAEVGMRYAVRQGVPV 93
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
DI +E S T++N ++ + N QG +N ++VS HL R+ + + G+ + S +
Sbjct: 94 HDILIEKTSRTTYENL-YNIRPLLNEQGLQNNVIVSDPLHLARAGVMAEDLGMEAELSAT 152
>gi|294340205|emb|CAZ88577.1| conserved hypothetical protein; putative exported protein
[Thiomonas sp. 3As]
Length = 252
Score = 38.1 bits (87), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
S R+ ++L Q + T++ISGG + E+ + ++ G + L+T
Sbjct: 105 SLKRLLAAVQL----AQRTPDSTLLISGG--WGRTVREANLMGALAVQLGFPASRMILDT 158
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY----LN 208
S TFQ A + I LV+SA H+ R+ + F H ++ A DY +
Sbjct: 159 ASRTTFQTAVNTRERILQFPVGRRYLVTSADHMPRAMMAFAHEQVSICAWPVDYEAIPIQ 218
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A + P + T + E +G+L YYR
Sbjct: 219 ALDMLNPQISALDKTTRVVHELLGML--YYR 247
>gi|228997721|ref|ZP_04157328.1| hypothetical protein bmyco0003_22930 [Bacillus mycoides Rock3-17]
gi|229009077|ref|ZP_04166416.1| hypothetical protein bmyco0002_57970 [Bacillus mycoides Rock1-4]
gi|228752247|gb|EEM01936.1| hypothetical protein bmyco0002_57970 [Bacillus mycoides Rock1-4]
gi|228762065|gb|EEM11004.1| hypothetical protein bmyco0003_22930 [Bacillus mycoides Rock3-17]
Length = 184
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
M S + + I+ SGG + G E N + +GV + I E Q+ T +N
Sbjct: 35 MEKAASLYKQGLAPYILPSGGYKPQVGTTEWDFLRNIGIANGVPEEAILKEDQAQHTLEN 94
Query: 161 AQFSSSMIKN--MQGKNIILVSSAYHLKRSQLYFQ-HFGINTKASCSDYLNAYYSIIPLS 217
A+ S +++N + K I+V A H +R+ L +Q F T+ S ++ Y
Sbjct: 95 ARLSLEVLQNTGIDPKKAIIVCKAGHSRRALLCYQAEFPKETEFFVSSVIDRYGIT---K 151
Query: 218 ANFYLTELAL 227
N++ TE+ +
Sbjct: 152 ENWFTTEIGI 161
>gi|33152025|ref|NP_873378.1| hypothetical protein HD0881 [Haemophilus ducreyi 35000HP]
gi|33148247|gb|AAP95767.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 248
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY--- 206
LE + T +NAQFS ++ N IILV+ +H++R++ F+ G + Y
Sbjct: 153 LEENAKTTQENAQFSYEILANANINKIILVTHQWHMQRAKKLFEQQGFKVLPASVGYGVT 212
Query: 207 LNAYYS---IIPLSANFYLTELALKEYIGIL 234
N Y+ IP S + KE++G L
Sbjct: 213 PNVYFDFSYFIPQSGAMDSVMQSFKEWLGYL 243
>gi|315304604|ref|ZP_07874845.1| putative cytoplasmic protein [Listeria ivanovii FSL F6-596]
gi|313627033|gb|EFR95925.1| putative cytoplasmic protein [Listeria ivanovii FSL F6-596]
Length = 189
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG E+ V L+ G+ R I ET+S T +N S + Q +
Sbjct: 78 VIVSGGQGTDESETEASVMEEYLVNEGIRRARIDTETKSKRTEENISNSK---EKFQLEK 134
Query: 176 IILVSSAYHLKRSQLYFQHFGIN 198
++V+S YH+ R+ + + I+
Sbjct: 135 TVIVTSDYHMYRALMLAKRQNID 157
>gi|308069364|ref|YP_003870969.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
gi|305858643|gb|ADM70431.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
Length = 228
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG-DPQKHGLAESIVYNNKLLESGVERD 146
EPS R+ E +RLY++ + I+SGG D E+ L++ GV
Sbjct: 79 EPSPGLKERLEEALRLYRNGTVQRL----IVSGGLDKPDFPYTEAEGMQRYLVDRGVPVQ 134
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
I LE + T++N +S ++ + ++++ +YH R+
Sbjct: 135 HIVLENHATSTYENLLYSQRIMSEYGWISTVIITHSYHGPRA 176
>gi|257467698|ref|ZP_05631794.1| hypothetical protein FulcA4_00092 [Fusobacterium ulcerans ATCC
49185]
gi|317061992|ref|ZP_07926477.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
gi|313687668|gb|EFS24503.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
Length = 244
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 102 RLYKSCK--QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL K+ K + + I+SGG + ++E+ L E G+ +I E +S T++
Sbjct: 112 RLNKAVKYFKENPDTIFIVSGGQGKDELISEAEAMEIYLSERGIPIKNIIKEDKSTSTYE 171
Query: 160 NAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQL 190
N +FS +IK + +I ++ +++H+ R ++
Sbjct: 172 NLKFSDKIIKEKEITGDIAVMFNSFHMYRVKM 203
>gi|296133679|ref|YP_003640926.1| protein of unknown function DUF218 [Thermincola sp. JR]
gi|296032257|gb|ADG83025.1| protein of unknown function DUF218 [Thermincola potens JR]
Length = 202
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
L +G + + E S T++N F++ +++ + K+IILV+S YH R++ F+ +
Sbjct: 102 LSAGFPYEAVISENASASTYENVLFTTKILQEKRLKSIILVTSPYHTYRAKKMFEDKQVK 161
Query: 199 TKAS 202
A+
Sbjct: 162 VTAA 165
>gi|261492343|ref|ZP_05988905.1| hypothetical protein COK_0773 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496129|ref|ZP_05992537.1| hypothetical protein COI_1870 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308231|gb|EEY09526.1| hypothetical protein COI_1870 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261312026|gb|EEY13167.1| hypothetical protein COK_0773 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 715
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 76 TTIIPTIPAI---RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
TT+IP A+ P + + + K + II+SGG P ++ AE+
Sbjct: 200 TTMIPDTIAVFGQSPNPDGTPSKGLLQRLEKTKEMAAKFPNAKIILSGG-PVRYIYAEAD 258
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
V L+E+GV+ + L+ + DT NA +K G+ ++ + + HL R+
Sbjct: 259 VMKKWLIENGVDESRLLLDDVARDTPGNAVGIIDFMKEYGGRKVLGIGTILHLPRA 314
>gi|269120634|ref|YP_003308811.1| hypothetical protein Sterm_2025 [Sebaldella termitidis ATCC 33386]
gi|268614512|gb|ACZ08880.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 216
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS R+ +T LYK+ K I++SG QK+ E N LL+ G+ +DI
Sbjct: 59 PSGVVRQRLDKTAELYKAGKIKR----ILVSGDHGQKN-YDEVNSMKNYLLKKGIPIEDI 113
Query: 149 KLETQSLDTFQNAQFSSSMIKN---MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
L+ DT+ SSM++ + ++I+++ +HL RS + G+N S+
Sbjct: 114 FLDHAGFDTY------SSMVRAKEIFEIDDVIVITQKFHLPRSVYIARKKGMNAYGVVSN 167
>gi|197336672|ref|YP_002157666.1| transporter [Vibrio fischeri MJ11]
gi|197313924|gb|ACH63373.1| transporter [Vibrio fischeri MJ11]
Length = 364
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I+++GG P+ H E + + L+++G++ I + + T +NA +SS + +
Sbjct: 230 IVVTGGVPKNHK-TEGKLMADWLVKNGIDASRIIEDNYARSTVENALYSSYALARHNIDH 288
Query: 176 IILVSSAYHLKRSQLYFQ 193
++SSA H++R Q F+
Sbjct: 289 ATIISSASHVRRGQALFE 306
>gi|329944928|ref|ZP_08292955.1| hypothetical protein HMPREF9056_00838 [Actinomyces sp. oral taxon
170 str. F0386]
gi|328529739|gb|EGF56635.1| hypothetical protein HMPREF9056_00838 [Actinomyces sp. oral taxon
170 str. F0386]
Length = 355
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--NMQG 173
+++SGG ++E+ + + G+ I LE +S T N + ++ M
Sbjct: 212 LVMSGGQGPDEPVSEARAMADYAIARGIPSGQILLEDRSTTTRTNITCTRDLLAEHGMVD 271
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
++LV+S++H R+ + G+ + S +A FY+ L+EYI +
Sbjct: 272 PQVLLVTSSFHAVRTAILASDMGVPWAVAPSR-----------TAWFYIVNAWLREYIAV 320
Query: 234 L 234
L
Sbjct: 321 L 321
>gi|228991869|ref|ZP_04151805.1| hypothetical protein bpmyx0001_26140 [Bacillus pseudomycoides DSM
12442]
gi|228997985|ref|ZP_04157586.1| hypothetical protein bmyco0003_25540 [Bacillus mycoides Rock3-17]
gi|229005536|ref|ZP_04163248.1| hypothetical protein bmyco0002_24730 [Bacillus mycoides Rock1-4]
gi|228755723|gb|EEM05056.1| hypothetical protein bmyco0002_24730 [Bacillus mycoides Rock1-4]
gi|228761718|gb|EEM10663.1| hypothetical protein bmyco0003_25540 [Bacillus mycoides Rock3-17]
gi|228767598|gb|EEM16225.1| hypothetical protein bpmyx0001_26140 [Bacillus pseudomycoides DSM
12442]
Length = 218
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 88 EPSFQSYSRIFETMRLYK--SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
+PS RI + LYK S K+ II +GG + E+ L+ V+
Sbjct: 69 KPSPVFRERINHAISLYKNGSIKK------IIFTGGTKFEAEQEEARTAKAYALKHNVKD 122
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNI-------ILVSSAYHLKRSQLYFQHFGIN 198
+DI +ETQS +F+ +KN + I +VS H+KR+ +H GI+
Sbjct: 123 EDILIETQS-------RFTEDNLKNAKQVGIDNGLHTYTIVSDPLHMKRAMRIAKHIGID 175
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
AS + + Y + F+ EL YIG
Sbjct: 176 AYASPTP--TSAYKTLDTEIPFFFKELC--SYIG 205
>gi|224541249|ref|ZP_03681788.1| hypothetical protein CATMIT_00409 [Catenibacterium mitsuokai DSM
15897]
gi|224525894|gb|EEF94999.1| hypothetical protein CATMIT_00409 [Catenibacterium mitsuokai DSM
15897]
Length = 405
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 116 IIISGGDPQKHG--LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-- 171
++++GG K+ + E + LL+ G+E + +E ++ DT NA+ + ++K
Sbjct: 141 VVVTGGGTAKNNPNVTEGGLMGEWLLKQGLEPSRLIVENRAQDTVGNAKNTYEVLKTKYP 200
Query: 172 QGKNIILVSSAYHLKRS-QLYFQHF 195
KN++LV+S YH+ R LY+ F
Sbjct: 201 SVKNVVLVTSDYHVTRGCILYYTKF 225
>gi|261866989|ref|YP_003254911.1| transporter [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261412321|gb|ACX81692.1| transporter [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 363
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 102 RLYKSCK--QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL K+ + + + II++GG PQ + E + L+ G++ I + + T +
Sbjct: 214 RLEKTLEIAKQNPDALIIVTGGVPQ-NNRTEGALMKQWLINKGIDAKRIYADNYARSTVE 272
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
NA FS + K+ L+SS H++R Q F+
Sbjct: 273 NALFSRYALAKHHIKHASLISSGSHVRRGQALFE 306
>gi|167754637|ref|ZP_02426764.1| hypothetical protein CLORAM_00139 [Clostridium ramosum DSM 1402]
gi|167705469|gb|EDS20048.1| hypothetical protein CLORAM_00139 [Clostridium ramosum DSM 1402]
Length = 209
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
II+SGG + E+ + L+ G++ I E +S +T +N +S +I+ ++
Sbjct: 94 IIVSGGQGHGENITEAKAMKDYLINKGIDESLIIEENKSTNTNENIIYSKKIIETSPTED 153
Query: 176 --IILVSSAYHLKRSQLYFQHFGI 197
++++++ +H RS+L G+
Sbjct: 154 YEVVIITNGFHCYRSKLLANKHGL 177
>gi|326204163|ref|ZP_08194023.1| protein of unknown function DUF218 [Clostridium papyrosolvens DSM
2782]
gi|325985674|gb|EGD46510.1| protein of unknown function DUF218 [Clostridium papyrosolvens DSM
2782]
Length = 256
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P+ R+ T+ YKS + II+SGG + E+ L++ + + I
Sbjct: 116 PTLVLKKRLDYTLDYYKS----NPDVKIIVSGGQGIGETITEAEAMKRYLVKHDIPENII 171
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFGINT 199
E S T++N +S +N GK ++++++ +H+ R+++ + G+
Sbjct: 172 LKEESSTSTYENMLYSKKAYENTIGKPLDKVMIITNDFHMFRAKILAKRAGLKA 225
>gi|261364900|ref|ZP_05977783.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996]
gi|288566949|gb|EFC88509.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996]
Length = 115
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGG G E+ + +E GV + I+LE S T++N S +++ II
Sbjct: 1 MSGG-TDGDGSNEAQTMRDMAVEMGVPSEKIRLEEHSESTYENIVLSVPKLRD--ANEII 57
Query: 178 LVSSAYHLKR----SQLYFQHFGINTKAS--CSD 205
+VS A+HL R ++ Y+Q + AS C D
Sbjct: 58 IVSDAFHLARASWLAKRYWQGKTVELYASGACGD 91
>gi|31616142|gb|AAP55236.1| unknown [Staphylococcus aureus]
Length = 204
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 99 ETMRLYKSC---KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
ET++ +C K+ + II+SGG P +G ++ V L + V+ + I E +S
Sbjct: 62 ETVKRLNTCLKAKKKNEKSYIIVSGGRPV-NGKTQANVMKKWLKQHSVKEEFIITEQESE 120
Query: 156 DTFQNAQFSSSMIKNMQGKNII-LVSSAYHLKRSQLYFQHFGINTKAS 202
DT +NA + + + +G N + ++++ H +R+ L F+ N K +
Sbjct: 121 DTLENA-IETLKLADRRGINTLSIITNGSHARRATLIFKKLDKNNKVN 167
>gi|56750108|ref|YP_170809.1| hypothetical protein syc0099_d [Synechococcus elongatus PCC 6301]
gi|56685067|dbj|BAD78289.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 188
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 18/92 (19%)
Query: 115 TIIISGGDPQKHGLAESIVYNNKLL------------------ESGVERDDIKLETQSLD 156
I + GGDPQ+ A + + L ++GV R + L+ Q+ D
Sbjct: 31 AIFVLGGDPQREQFAAELAQTHPDLPIWVSSGSNPEYAEWVFGQAGVPRSRLHLDYQATD 90
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
T N + + +++ LV+S YH++R+
Sbjct: 91 TLSNFTSLADRFQQQGIQHVYLVTSDYHMRRA 122
>gi|260101912|ref|ZP_05752149.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|260084275|gb|EEW68395.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
Length = 367
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 27/182 (14%)
Query: 60 PQWKKDGNIIVL---LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P+ K +IVL L NG + + A RI + Q YS R Y+ ++ + I
Sbjct: 173 PRRYKQDYLIVLGAGLINGDRVSKLLAA-RINRAIQ-YSN-----RQYQKGRKRPI---I 222
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKN 175
I+SG + E++ + G++ + + +E +S +T+QN FS + K+ N
Sbjct: 223 IMSGSQGPDEKIPEAVAMAKFARKRGIKTNHLLIEDKSKNTYQNMLFSKRLATKDFGSSN 282
Query: 176 I--ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
S+ YH+ R+ L + G+ + + +YL ++E+ G+
Sbjct: 283 FRSTFFSNNYHIFRAALLAKEVGLKANGVGA-----------FTRLYYLPNAIIREFAGV 331
Query: 234 LI 235
I
Sbjct: 332 FI 333
>gi|152975811|ref|YP_001375328.1| hypothetical protein Bcer98_2067 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152024563|gb|ABS22333.1| protein of unknown function DUF218 [Bacillus cytotoxicus NVH
391-98]
Length = 209
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 22/177 (12%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K D + V+LG A +PS RI + LY Q+ II +GG
Sbjct: 43 KVDTDAAVVLGAA--------AWNGKPSPVFRERINHAISLY----QNGNIKKIIFTGGT 90
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ L E+ L+ V+ +DI +ET+S T N + + + + +VS
Sbjct: 91 KFEAELEEARTAKAYALKRNVKDEDILIETKSRFTEDNLKNAKQVGMEHGLQTYTIVSDP 150
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSI---IPLSANFYLTELALKEYIGILIA 236
H+KR+ +H G++ AS + +AY S+ IP F+ EL YIG + +
Sbjct: 151 LHMKRAMQIAKHIGMDAYASPTP-TSAYKSLDTEIP----FFFKELC--SYIGYMTS 200
>gi|326789428|ref|YP_004307249.1| hypothetical protein Clole_0304 [Clostridium lentocellum DSM 5427]
gi|326540192|gb|ADZ82051.1| protein of unknown function DUF218 [Clostridium lentocellum DSM
5427]
Length = 239
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-N 175
++SGG E+ L+E G+E + + LE QS T++N ++S ++I ++ N
Sbjct: 127 VLSGGQGPDEITTEAEAMRRYLVEKGIEEERLILEEQSTSTYENLKYSFAIIDEIKANSN 186
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTEL--ALKEYI 231
+ +V++ +H+ R+++ G + +Y+ +IP N+Y E +KE I
Sbjct: 187 VSIVTNRFHVLRARMIASDMGRKVDGIGA---KSYFYLIP---NYYFREFFAVMKEII 238
>gi|257064629|ref|YP_003144301.1| hypothetical protein Shel_19360 [Slackia heliotrinireducens DSM
20476]
gi|256792282|gb|ACV22952.1| uncharacterized conserved protein [Slackia heliotrinireducens DSM
20476]
Length = 246
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I+SGG + E+ + L+E G++ I E S +T +N + SS+ + + +
Sbjct: 131 IVSGGQGPNEPITEADGMADYLIERGIDESRIIRENTSTNTVENIRNSSAFF-DAEHDRV 189
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+V++ +H+ RS Q G+ S S +YL L+E +GI
Sbjct: 190 GIVTNNFHVFRSVRIAQAQGVQNVCGIS----------ADSVAWYLPNNILRESMGIAKD 239
Query: 237 YYRGN 241
+GN
Sbjct: 240 LLKGN 244
>gi|229145780|ref|ZP_04274161.1| hypothetical protein bcere0012_29310 [Bacillus cereus BDRD-ST24]
gi|228637761|gb|EEK94210.1| hypothetical protein bcere0012_29310 [Bacillus cereus BDRD-ST24]
Length = 125
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 20/104 (19%)
Query: 135 NNKL-LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLY 191
NN++ LE+ ++ D +S T+QN FS ++++++G N I ++ +H+ R+ LY
Sbjct: 7 NNRIPLENTIKED------RSTTTYQNMLFSKRIMESLKGTQYNCIFSTNNFHVFRAGLY 60
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ G+N++ S +A +Y ++EYI I +
Sbjct: 61 AKIVGLNSQGIGSK-----------TAFYYWPNAMIREYIAIFV 93
>gi|296139777|ref|YP_003647020.1| hypothetical protein Tpau_2069 [Tsukamurella paurometabola DSM
20162]
gi|296027911|gb|ADG78681.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 253
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NMQGK 174
+I++GG+P K G E+ L+ G+ + E + T NA ++++++ N G
Sbjct: 137 VIVTGGNP-KAGKTEAAAMKEWLIGQGISPTRVYTENGAGSTQGNAINTAALMRQNGFGN 195
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKA 201
+LV+SA H +RS F G+ +A
Sbjct: 196 GAVLVTSADHTRRSVADFLVAGVTLQA 222
>gi|229051580|ref|ZP_04195052.1| hypothetical protein bcere0027_54850 [Bacillus cereus AH676]
gi|296503712|ref|YP_003665412.1| hypothetical protein BMB171_C2882 [Bacillus thuringiensis BMB171]
gi|228721770|gb|EEL73242.1| hypothetical protein bcere0027_54850 [Bacillus cereus AH676]
gi|296324764|gb|ADH07692.1| hypothetical protein BMB171_C2882 [Bacillus thuringiensis BMB171]
Length = 121
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 20/104 (19%)
Query: 135 NNKL-LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLY 191
NN++ LE+ ++ D +S T+QN FS ++++++G N I ++ +H+ R+ LY
Sbjct: 7 NNRIPLENTIKED------RSTTTYQNMLFSKRIMESLKGTQYNCIFSTNNFHVFRAGLY 60
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ G+N++ S +A +Y ++EYI I +
Sbjct: 61 AKIVGLNSQGIGSK-----------TAFYYWPNAMIREYIAIFV 93
>gi|81300267|ref|YP_400475.1| hypothetical protein Synpcc7942_1458 [Synechococcus elongatus PCC
7942]
gi|81169148|gb|ABB57488.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 188
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 18/92 (19%)
Query: 115 TIIISGGDPQKHGLAESIVYNNKLL------------------ESGVERDDIKLETQSLD 156
I + GGDPQ+ A + + L ++GV R + L+ Q+ D
Sbjct: 31 AIFVLGGDPQREQFAAELAQTHPDLPIWVSSGSNPEYAEWVFSQAGVPRSRLHLDYQATD 90
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
T N + + +++ LV+S YH++R+
Sbjct: 91 TLSNFTSLADRFQQQGIQHVYLVTSDYHMRRA 122
>gi|163790688|ref|ZP_02185115.1| hypothetical protein CAT7_00865 [Carnobacterium sp. AT7]
gi|159873989|gb|EDP68066.1| hypothetical protein CAT7_00865 [Carnobacterium sp. AT7]
Length = 196
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P + I P Q Y R + L + S II+S D ++ V K
Sbjct: 38 PVQSDVIIVPEGQEYVRAYRAAELLH--EGFSTSGQIIVSPID-------KATVQGYK-- 86
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
E V ++ I ET++ T++NA + M++ + I+VSS YH++R++L ++
Sbjct: 87 EFWVSQEQIIPETKATSTYENAVITLRMMEEHGFDSAIIVSSDYHMRRTKLIYER 141
>gi|145220256|ref|YP_001130965.1| hypothetical protein Cvib_1452 [Prosthecochloris vibrioformis DSM
265]
gi|145206420|gb|ABP37463.1| protein of unknown function DUF218 [Chlorobium phaeovibrioides DSM
265]
Length = 246
Score = 37.0 bits (84), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD-PQKHG 127
IV+LG T IP P+ + R + L+++ + ++ +GG P +
Sbjct: 75 IVVLGGMTLQIPGAPSGEWG---DAADRFEAGVDLFRAGRA----PLLVFTGGRLPWREN 127
Query: 128 L-AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E + + + GV D +++ + +T + A+ ++ ++ K IILV+SA+H+
Sbjct: 128 FEPEGELLRRRAVLLGVPADGVRVTGIAGNTAEEARAAARLLG--PNKRIILVTSAFHMT 185
Query: 187 RSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
RS F+ G DY + S IP L+ AL+E +G IA+Y
Sbjct: 186 RSLRLFRSAGFTVVPFRVDYRVQPSTRTSILSFIPDPEALLLSFTALREMMG--IAWY 241
>gi|298244343|ref|ZP_06968149.1| protein of unknown function DUF218 [Ktedonobacter racemifer DSM
44963]
gi|297551824|gb|EFH85689.1| protein of unknown function DUF218 [Ktedonobacter racemifer DSM
44963]
Length = 239
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%)
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+K + GV D I LE +SL T + A++ +++ + IILV+S +H R+ L F
Sbjct: 129 RDKAMAYGVPDDAIVLEEESLHTRETAEYVLDIVQKHKWYKIILVTSPFHQLRTYLTFAK 188
Query: 195 FGINTKASCSDYLNAYYSIIPLS 217
+ S+Y S P++
Sbjct: 189 VFLPYDIQISNYYADSDSWHPMA 211
>gi|225027612|ref|ZP_03716804.1| hypothetical protein EUBHAL_01869 [Eubacterium hallii DSM 3353]
gi|224955068|gb|EEG36277.1| hypothetical protein EUBHAL_01869 [Eubacterium hallii DSM 3353]
Length = 250
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKN 175
I+SGG + ++E+ L + G+ I E +S T +N +FS +++ G N
Sbjct: 139 IVSGGMGEGEKISEAECMYRYLTKKGINSSRIIKEDKSTSTRENLRFSKKIMEEKGLGNN 198
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKA 201
I + +S YH R+ + G + A
Sbjct: 199 IAIATSEYHQYRASQIAKSLGFSVGA 224
>gi|308804261|ref|XP_003079443.1| unnamed protein product [Ostreococcus tauri]
gi|116057898|emb|CAL54101.1| unnamed protein product [Ostreococcus tauri]
Length = 417
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 23/145 (15%)
Query: 62 WKKDGNI---IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
W+ D I IV++ G T+P + P FE I++
Sbjct: 195 WENDSEIVDAIVVVAGGIEADGTLPPW-VTPRLDRARERFEAT---------GGRVKILV 244
Query: 119 SGG---------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
SG P + ES + L+E GV + +T S+DT NA +S +
Sbjct: 245 SGSMTPHKPPPMGPGGFNVHESTSMASYLMERGVPATAVLKDTASMDTIGNAYYSLCLHA 304
Query: 170 NMQG-KNIILVSSAYHLKRSQLYFQ 193
G K + +V+SA+H+ R++ F+
Sbjct: 305 IPLGWKRVEVVTSAFHMARTRAAFE 329
>gi|319652939|ref|ZP_08007044.1| hypothetical protein HMPREF1013_03659 [Bacillus sp. 2_A_57_CT2]
gi|317395288|gb|EFV76021.1| hypothetical protein HMPREF1013_03659 [Bacillus sp. 2_A_57_CT2]
Length = 199
Score = 36.6 bits (83), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ E +RLY+ + + + + SGG H L E+ + K + G+ D+ +E S
Sbjct: 46 RLPEAIRLYQKGRANKL----LFSGGVRWSGHELTEAEMLMKKAIGFGIPPKDLFIENIS 101
Query: 155 LDTFQNAQFSSSMIKNMQG----KNIILVSSAYHLKR 187
L T +N S ++ M G NII+V++ +H++R
Sbjct: 102 LHTKENVLASMLVMDRMCGLENISNIIIVTAPFHMRR 138
>gi|293391137|ref|ZP_06635471.1| transporter [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290951671|gb|EFE01790.1| transporter [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 363
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 102 RLYKSCK--QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RL K+ + + + II++GG PQ + E + L+ G++ I + + T +
Sbjct: 214 RLEKTLEIAKQNPDALIIVTGGVPQ-NNRTEGALMKQWLINKGIDAKRIYADNYARSTVE 272
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
NA FS + K+ L+SS H++R + F+
Sbjct: 273 NALFSRYALAKHHIKHAALISSGSHVRRGRALFE 306
>gi|328464062|gb|EGF35549.1| hypothetical protein AAULH_11576 [Lactobacillus helveticus MTCC
5463]
Length = 367
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 78/182 (42%), Gaps = 27/182 (14%)
Query: 60 PQWKKDGNIIVL---LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P+ K +IVL L NG + + A RI + Q YS R Y+ ++ + I
Sbjct: 173 PRRYKQDYLIVLGAGLINGDRVSKLLAA-RINRAIQ-YSN-----RQYQKGRKRPI---I 222
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKN 175
I+SG + E++ + G++ + + +E +S +T+QN FS + K+ N
Sbjct: 223 IMSGSQGPDEKIPEAVAMAKFARKRGIKTNHLLIEDKSKNTYQNMLFSKRLATKDFGSSN 282
Query: 176 I--ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
S+ YH+ R+ L + G+ + + +YL ++E+ G+
Sbjct: 283 FRSTFFSNNYHIFRAALLSKEVGLKANGVGA-----------FTRLYYLPNAIIREFAGV 331
Query: 234 LI 235
+
Sbjct: 332 FV 333
>gi|266623715|ref|ZP_06116650.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
gi|288864487|gb|EFC96785.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
Length = 688
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 194 HFGINTKA-SCSDYLNAYYSIIPLSANFYLTELALKE 229
HFG A SDYLNA+Y I + +FYL E A+KE
Sbjct: 563 HFGKGYSAYESSDYLNAFYEIGQAADHFYLAEEAMKE 599
>gi|153810184|ref|ZP_01962852.1| hypothetical protein RUMOBE_00565 [Ruminococcus obeum ATCC 29174]
gi|149833363|gb|EDM88444.1| hypothetical protein RUMOBE_00565 [Ruminococcus obeum ATCC 29174]
Length = 194
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI---ILVSSAYHLKRSQLYFQH 194
L+++GV D + E Q+ T++NA+FS + + G NI I+ YH +R+ +Y+Q
Sbjct: 89 LMKNGVPADAVLKEDQATFTWENAKFSRK-VTDQAGINIRKAIICCKNYHARRALMYYQR 147
>gi|262375317|ref|ZP_06068550.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262309571|gb|EEY90701.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 379
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINT 199
LE +S++T +N +FSS +++ G +IL++ YH+ R++ F GI T
Sbjct: 280 LEDRSMNTCENTRFSSLLLQKKGGAPTVILITDRYHMPRTRRLFALNGIQT 330
>gi|229058345|ref|ZP_04196730.1| hypothetical protein bcere0026_14580 [Bacillus cereus AH603]
gi|228720019|gb|EEL71608.1| hypothetical protein bcere0026_14580 [Bacillus cereus AH603]
Length = 159
Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 13/125 (10%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ ++ + SYS + + + K H I+SGG +
Sbjct: 6 DADYIIVLGS-----------KVNGTKPSYSLQYRIDKAAEYLKLHD-KTIAIVSGGQGK 53
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E++ L++ + D I +E +S T +N +F +I K +I V++ +H
Sbjct: 54 GEDITEALAMKQGLMKQNIAEDRIIMEDKSTSTDENIKFLKPLIPANMKKGMI-VTNDFH 112
Query: 185 LKRSQ 189
+ R++
Sbjct: 113 MFRAK 117
>gi|330793832|ref|XP_003284986.1| hypothetical protein DICPUDRAFT_148822 [Dictyostelium purpureum]
gi|325085107|gb|EGC38521.1| hypothetical protein DICPUDRAFT_148822 [Dictyostelium purpureum]
Length = 549
Score = 36.2 bits (82), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+E+ N L + V DI +E S +T +NA+++ +K + + +V+S +H+ RS
Sbjct: 191 SEAEAMNEIALHNDVPARDIMIENNSTNTAENAKYTLEFLKQHNIQRLFIVTSDFHVLRS 250
Query: 189 QLYFQ 193
Q FQ
Sbjct: 251 QYIFQ 255
>gi|295132769|ref|YP_003583445.1| two-component system sensor histidine kinase/response
regulator,hybrid ('one-component system') [Zunongwangia
profunda SM-A87]
gi|294980784|gb|ADF51249.1| two-component system sensor histidine kinase/response
regulator,hybrid ('one-component system') [Zunongwangia
profunda SM-A87]
Length = 1351
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
NK E+ E +K+E Q L F+N + + QGK + +++ + R+ LY +
Sbjct: 1228 NKSTETATESKQVKIEKQFLKKFENTVHKNIQV---QGKLVEIIAEEMGMSRASLYRK-- 1282
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
KA +N Y I L + YL E KE + I +A +
Sbjct: 1283 ---IKALTGSSINEYIRDIKLDKSLYLIE---KEGLNISMAAFE 1320
>gi|291286558|ref|YP_003503374.1| hypothetical protein Dacet_0629 [Denitrovibrio acetiphilus DSM
12809]
gi|290883718|gb|ADD67418.1| protein of unknown function DUF218 [Denitrovibrio acetiphilus DSM
12809]
Length = 190
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 140 ESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
E + D I +E S DT +A F+ ++++KN + K I++V+S YH+ R++ F+
Sbjct: 67 EKNIPVDRIIVELNSRDTVGDAIFTKNNIVKNKEWKKILVVTSDYHVDRTRKIFE 121
>gi|169349938|ref|ZP_02866876.1| hypothetical protein CLOSPI_00678 [Clostridium spiroforme DSM 1552]
gi|169293506|gb|EDS75639.1| hypothetical protein CLOSPI_00678 [Clostridium spiroforme DSM 1552]
Length = 261
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS R+ T+ Y Q TII+SGG ++E+ L++ G+ + I
Sbjct: 123 PSTSLKYRLDATLEYY----QQFPETTIIVSGGQGNGENISEAKAMKQYLIDKGINNNSI 178
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQL 190
E +S +N +S ++ +++ + + ++++ +H RS+L
Sbjct: 179 IEENKSTYAKENIIYSKKIMDSLKKEKYTVTIITNNFHCYRSKL 222
>gi|29830135|ref|NP_824769.1| integral membrane protein [Streptomyces avermitilis MA-4680]
gi|29607245|dbj|BAC71304.1| putative integral membrane protein [Streptomyces avermitilis
MA-4680]
Length = 579
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
W KD N ++L GNG IPT PA + P Y
Sbjct: 121 NWAKDANDLILQGNGHVAIPTDPAYVVHPPVGKY 154
>gi|218281320|ref|ZP_03487808.1| hypothetical protein EUBIFOR_00373 [Eubacterium biforme DSM 3989]
gi|218217505|gb|EEC91043.1| hypothetical protein EUBIFOR_00373 [Eubacterium biforme DSM 3989]
Length = 179
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 54/92 (58%), Gaps = 10/92 (10%)
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
Q +++ T+IISG + + + +++ +++ ++ I LET + +TF+N +FS +I
Sbjct: 60 QQNLYDTLIISGSNVKNEFIEAKVMH--AYIQNKMDIPTI-LETNARNTFENFKFSKDII 116
Query: 169 KNMQGKNIILVSSAYHLKR----SQLYFQHFG 196
Q +++++++S H KR ++ +F +G
Sbjct: 117 ---QKQDVLILTSQTHAKRACAIARQFFSDYG 145
>gi|167626293|ref|YP_001676793.1| hypothetical protein Fphi_0073 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167596294|gb|ABZ86292.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 357
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+ II+SGG + G+ ES L++ G+ I E QS +T NA + ++IK +
Sbjct: 223 NAIIIVSGGVAHE-GVTESYQMKQWLIKHGISAQSIIQEDQSTNTVTNAINTINIIKKIN 281
Query: 173 G--KNIILVSSAYHLKRSQLYFQHFGINTK 200
KNI+L+SS H++R+ F+ N K
Sbjct: 282 RPVKNILLISSDSHIRRANSIFEQEIYNAK 311
>gi|167465736|ref|ZP_02330825.1| hypothetical protein Plarl_24758 [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381937|ref|ZP_08055887.1| hypothetical protein PL1_0708 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321154077|gb|EFX46405.1| hypothetical protein PL1_0708 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 233
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 116 IIISGGDPQKHG---LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+I+SGG K G + E+ N L++ G+ I +E Q+ +T++N FS +++
Sbjct: 74 LIVSGG-LDKEGDSQITEAEGMRNYLVQKGIPEQAITMEKQAKNTYENLVFSKRIMEQKG 132
Query: 173 GKNIILVSSAYHLKRS 188
+ I+++ YH R+
Sbjct: 133 WTSCIIITHEYHGARA 148
>gi|269104576|ref|ZP_06157272.1| hypothetical protein VDA_000733 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161216|gb|EEZ39713.1| hypothetical protein VDA_000733 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 363
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ E + + + + II++GG PQ + E + + L++ G+ + + + +
Sbjct: 210 LIERLNMTLKIAKEQPNSLIILTGGVPQNNQ-TEGRLMADWLIKQGINPNRLIEDNYARS 268
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
T +NA +SS + + ++ ++SSA H++R Q F+
Sbjct: 269 TVENALYSSYALARHKIEHATIISSASHVRRGQTLFE 305
>gi|302847168|ref|XP_002955119.1| hypothetical protein VOLCADRAFT_106645 [Volvox carteri f.
nagariensis]
gi|300259647|gb|EFJ43873.1| hypothetical protein VOLCADRAFT_106645 [Volvox carteri f.
nagariensis]
Length = 251
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
E S T++NA FS ++ K K +++V+S +H RS+L F+
Sbjct: 129 EDASTSTYENALFSLAICKEKGWKTLLIVTSPFHQLRSELVFRRL 173
>gi|258514186|ref|YP_003190408.1| hypothetical protein Dtox_0889 [Desulfotomaculum acetoxidans DSM
771]
gi|257777891|gb|ACV61785.1| protein of unknown function DUF218 [Desulfotomaculum acetoxidans
DSM 771]
Length = 236
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
Q +I+SG D K E L++ G +D+ ++ T+++ + +
Sbjct: 89 QRGKAAKLIVSG-DHGKFSYDEVNAMKKFLIDKGARNEDVFMDHAGFSTYESLYRARDI- 146
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
Q KNII+V+ YHL R+ + G+ +D + Y I+ + L E+A +
Sbjct: 147 --FQAKNIIIVTQQYHLLRAVFIARELGLKAYGVAADRQD--YGIV--MEKYKLREIAAR 200
Query: 229 E 229
+
Sbjct: 201 D 201
>gi|160881431|ref|YP_001560399.1| hypothetical protein Cphy_3306 [Clostridium phytofermentans ISDg]
gi|160430097|gb|ABX43660.1| protein of unknown function DUF218 [Clostridium phytofermentans
ISDg]
Length = 189
Score = 35.4 bits (80), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQH-F 195
++ G+ D I E ++ +T++NA FS ++ K + +ILV AYH +R+ +Q F
Sbjct: 75 IKRGISSDIIICENKATNTYENALFSYELLMGKCIDITKVILVCKAYHSRRALFSYQKVF 134
Query: 196 GINT 199
NT
Sbjct: 135 PANT 138
>gi|290473867|ref|YP_003466741.1| hypothetical protein XBJ1_0806 [Xenorhabdus bovienii SS-2004]
gi|289173174|emb|CBJ79947.1| putative enzyme [Xenorhabdus bovienii SS-2004]
Length = 268
Score = 35.4 bits (80), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 23/174 (13%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQ----SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
IV+LG G T P + PS S R+ E +RLY H T +I G
Sbjct: 87 IVVLGGGFTYNP-----QWAPSANLISNSLPRVTEGIRLY-----HLNPGTKMIFTGGKG 136
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ ++ + + G+ +D + LDT + A ++ + ILV+SA H
Sbjct: 137 VNSISSAEIAAMVAQSLGIPVEDTIALREPLDTEEEAAEVEKVLGQ---QPFILVTSANH 193
Query: 185 LKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIG 232
++RS +F+ G++ A ++ L A+ IP + F TE A E +G
Sbjct: 194 MERSLKFFERRGMHPIAGPANQLAVTTPLYAWEKYIPSAYYFSHTERAWYETLG 247
>gi|229085827|ref|ZP_04218054.1| hypothetical protein bcere0022_24320 [Bacillus cereus Rock3-44]
gi|228697494|gb|EEL50252.1| hypothetical protein bcere0022_24320 [Bacillus cereus Rock3-44]
Length = 209
Score = 35.4 bits (80), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Query: 88 EPSFQSYSRIFETMRLYK--SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
+PS RI + LYK S K+ II +GG + E+ L+ V+
Sbjct: 60 KPSPVFRERINHAISLYKNGSIKK------IIFTGGTKFEAEQEEARTAKAYALKHDVKD 113
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+DI +ETQS T N + + + + + +VS H+KR+ +H G+ +A S
Sbjct: 114 EDILIETQSRFTEDNLKNAKQVGMDNGLQTYTIVSDPLHMKRAMKIAKHIGM--EAYSSP 171
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIG 232
+ Y + F+ EL YIG
Sbjct: 172 TPTSAYKTLDTEIPFFFKELC--SYIG 196
>gi|254472459|ref|ZP_05085859.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211958742|gb|EEA93942.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 239
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 31/46 (67%)
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ L+ ++L+T NA+ ++S ++ Q ++++V+SAYH+ R+ Q
Sbjct: 135 VDLDRKALNTIGNAEETASWVRKNQFNSLLVVTSAYHMPRALAELQ 180
>gi|209694358|ref|YP_002262286.1| hypothetical protein, putative phage gene [Aliivibrio salmonicida
LFI1238]
gi|208008309|emb|CAQ78460.1| putative exported protein, putative phage gene [Aliivibrio
salmonicida LFI1238]
Length = 337
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--- 173
II G +K+ + E+ + L + G+E + E++SLDT NA+FS I+
Sbjct: 150 IILSGKGRKNNVIEADYMYDYLKDKGIETKRMYKESESLDTVGNAEFSYFTIQENPSLNK 209
Query: 174 -KNIILVSSAYHLKRSQLYF 192
KN +++++ YH RS F
Sbjct: 210 IKNWLVITNNYHAMRSLFNF 229
>gi|159896636|ref|YP_001542883.1| WD-40 repeat-containing protein [Herpetosiphon aurantiacus ATCC
23779]
gi|159889675|gb|ABX02755.1| WD-40 repeat protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 1209
Score = 35.4 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
QF ++ +L + +++L + P PA R ++ Y+++F+ + S +
Sbjct: 233 QFEHRLSVLIDYLRTTRCLLILDNIEAILQPQYPAGRYREGYEQYAQLFQAI----SERS 288
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
H C I+ S P + E V+ ++ +G+ RDD ++ + + + Q +IK
Sbjct: 289 HE-SCLILTSREKPYEFNRLEG-VHTRSMVLTGLMRDDAQMLLDNQELYGTPQLWQELIK 346
Query: 170 NMQGKNIIL 178
+ G + L
Sbjct: 347 HYTGNPLAL 355
>gi|311032605|ref|ZP_07710695.1| hypothetical protein Bm3-1_19074 [Bacillus sp. m3-13]
Length = 207
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 36/164 (21%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
++G+ I + G+ + R+ P+ Q Y Q I+ SGG
Sbjct: 31 RNGDCIFVPGSSKAV-----QYRLPPAIQLY--------------QEGRAGKILFSGGVV 71
Query: 124 -QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM----QGKNIIL 178
+ L+E+ + K +E GV +DI +E QSL T +N S ++ + +I+
Sbjct: 72 WDGNQLSEAQLLAEKAMELGVPSEDILIENQSLHTKENVLASLLVLDRALHLHKISRLIV 131
Query: 179 VSSAYHLKRSQLYFQHF----------GINTKASCSD--YLNAY 210
V+S YH++R L + + +N + + D +LN Y
Sbjct: 132 VTSHYHMRRMNLKLRTYMPDWIDYSLCPVNDRTTREDNWFLNPY 175
>gi|227874501|ref|ZP_03992673.1| conserved hypothetical protein [Oribacterium sinus F0268]
gi|227839645|gb|EEJ50103.1| conserved hypothetical protein [Oribacterium sinus F0268]
Length = 329
Score = 35.0 bits (79), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 33/198 (16%)
Query: 5 WIFLIVSYWHLLC-------QSIRK--IFFMSCFMLLFSFIGWGIIPTILLKHL-QFSYQ 54
WI+L++ HLL + +RK +FF L S+ + ++ + L+ +L Q+ Y
Sbjct: 30 WIWLLLGAIHLLMAFVYKAPERLRKNPLFFRFRIFGLSSYCIFFLLFSYLIGYLSQYHY- 88
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKS--CKQHSM 112
QWK + I+++G+ + +I P Q+ RL ++ C Q +
Sbjct: 89 -----GQWKDPLSYILVVGS------ELENNKITPLLQN--------RLERADLCYQENP 129
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNM 171
TI++SGG + AE+ V +L+ G+ D + +E S T Q + S+ +
Sbjct: 130 SATIVLSGGKGRNSASAEASVMYQSMLKMGIPADAMLMEFYSKTTEQKLSYGIESIFQGE 189
Query: 172 QGKNIILVSSAYHLKRSQ 189
Q + V KR +
Sbjct: 190 QNQEGSEVEEDLRQKRRE 207
>gi|169349813|ref|ZP_02866751.1| hypothetical protein CLOSPI_00551 [Clostridium spiroforme DSM 1552]
gi|169293381|gb|EDS75514.1| hypothetical protein CLOSPI_00551 [Clostridium spiroforme DSM 1552]
Length = 196
Score = 35.0 bits (79), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS SR+ + + LY C H+ II SGG + E+ + + G+++ I
Sbjct: 55 PSLIMKSRVEKAIELY--C--HNKIDYIIFSGGKVH-NTYEEAAIMEKYAISLGLDKKII 109
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E +++ TF N + + ++ + ++V++ +HL+++ Y + +N +D
Sbjct: 110 IKENKAISTFHNLLYCTEIMNEHNFNSCLVVTNGWHLRKANHYARKNKLNYAMVVAD 166
>gi|228969746|ref|ZP_04130516.1| hypothetical protein bthur0004_64000 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228789968|gb|EEM37780.1| hypothetical protein bthur0004_64000 [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 103
Score = 35.0 bits (79), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H IN
Sbjct: 1 MKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKH--IN 58
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTEL 225
+A S + Y + F+ EL
Sbjct: 59 IEAYASPTPTSAYKTLDTEIPFFFKEL 85
Searching..................................................done
Results from round 2
>gi|255764508|ref|YP_003065363.2| hypothetical protein CLIBASIA_04245 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254547859|gb|ACT57423.2| hypothetical protein CLIBASIA_04245 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 242
Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats.
Identities = 242/242 (100%), Positives = 242/242 (100%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP
Sbjct: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG
Sbjct: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS
Sbjct: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG
Sbjct: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
Query: 241 NR 242
NR
Sbjct: 241 NR 242
>gi|325916062|ref|ZP_08178352.1| hypothetical protein XVE_2286 [Xanthomonas vesicatoria ATCC 35937]
gi|325537738|gb|EGD09444.1| hypothetical protein XVE_2286 [Xanthomonas vesicatoria ATCC 35937]
Length = 253
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 90/248 (36%), Positives = 143/248 (57%), Gaps = 11/248 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF---FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
M+L+ + ++ + LL + + F +LL IG G +P+ +L++LQ +
Sbjct: 1 MMLALVCVLFGFAWLLDRRGLRRFSRVLAGASLLLVLAIGCGPLPSWMLQNLQRTGVNDF 60
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
N+IVLLG GT A+ E + +Y RI E+ RLY+ C+ C I
Sbjct: 61 NG---WGARNVIVLLGAGTVRPEGRDAV-AEANMFAYGRIVESARLYRQCRHSGGDCKIE 116
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGGD + GL+E++VY L+ G++R D+ +E S++T+QNAQFS +++ + ++
Sbjct: 117 ISGGDARGLGLSEAVVYQRVLIGLGIDRADLIMEPSSMNTWQNAQFSQPLLRAHRPDRVV 176
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI---- 233
LVSSA HL+R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 177 LVSSATHLRRAELYFRHFGIDAIPVRADWLTASWSILPQSYNFTLADVALHEYLGIARYQ 236
Query: 234 LIAYYRGN 241
L + N
Sbjct: 237 LYQWLGWN 244
>gi|84387309|ref|ZP_00990329.1| hypothetical protein V12B01_04678 [Vibrio splendidus 12B01]
gi|84377758|gb|EAP94621.1| hypothetical protein V12B01_04678 [Vibrio splendidus 12B01]
Length = 253
Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats.
Identities = 93/228 (40%), Positives = 128/228 (56%), Gaps = 4/228 (1%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
V + LL +F + F IG G+IP LL LQ Y+ QW D N
Sbjct: 12 FVGFTRLLQWRKTSLFLSLVLISSFVLIGSGLIPRYLLNDLQADYES-KPDIQWS-DNNA 69
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IVLLG GT +I + EP+F S+ RI ET YK C + C +IISGGD Q +G+
Sbjct: 70 IVLLGAGTQLIKST--QEFEPAFFSFGRISETASQYKDCAKAQTTCKVIISGGDAQNNGV 127
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ +Y +LL V DDI E S++T++NAQ +S ++K+ + NI+LVSS H++RS
Sbjct: 128 TEAEIYQQQLLRLDVPMDDIIQEPNSVNTWKNAQLTSDLMKHHKFDNIVLVSSGLHIRRS 187
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+LYF HFG+N +DY+ A S +PL NF +T+ AL E IG
Sbjct: 188 ELYFNHFGLNVIPVRADYMAAQISWLPLWYNFAVTDFALHEQIGFARY 235
>gi|84624480|ref|YP_451852.1| hypothetical protein XOO_2823 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84368420|dbj|BAE69578.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 253
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 141/242 (58%), Gaps = 9/242 (3%)
Query: 1 MLLSWIFLIVSYWHLL----CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
M+L+ + ++ + L+ + ++ ++ +L+F+ +G G +P+ +L HLQ +
Sbjct: 1 MMLALVCVLFGFAWLIDRLGLRRFSRVLGLTSVLLVFA-VGCGPLPSWMLHHLQHTGVND 59
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ N+IVLLG GT A+ E + +Y RI E+ RLY+ C+ C I
Sbjct: 60 FNA---WGARNVIVLLGAGTVRPEGRDAV-AEANMFAYGRIVESARLYQQCRHSGGDCKI 115
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
ISGGDP+ GL+E++VY L++ + + D+ +E S++T QNAQFS +++ I
Sbjct: 116 EISGGDPRGLGLSEAVVYRRVLVDLAIPQADVIMEPSSMNTLQNAQFSQPLLRAYGPDRI 175
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+LVSSA HL R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+G+
Sbjct: 176 VLVSSATHLCRAELYFRHFGIDATPVRADWLTATWSILPQSYNFTLADVALHEYLGMARY 235
Query: 237 YY 238
Sbjct: 236 RL 237
>gi|166712483|ref|ZP_02243690.1| hypothetical protein Xoryp_13775 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 253
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 144/242 (59%), Gaps = 9/242 (3%)
Query: 1 MLLSWIFLIVSYWHLL----CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
M+++ + ++ + L+ + ++ ++ +L+F+ +G G +P+ +L HLQ +
Sbjct: 1 MMMALVCVLFGFAWLIHRLGLRRFSRVLGLTSVLLVFA-VGCGPLPSWMLHHLQHTGVSD 59
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ N+IVLLG GT + P + E + +Y RI E+ RLY+ C+ C I
Sbjct: 60 FNA---WGARNVIVLLGAGT-VRPEGRDVVAEANMFAYGRIVESARLYQQCRHSGGDCKI 115
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
ISGGDP+ GL+E++VY L+ + + D+ +E S++T+QNAQFS +++ + I
Sbjct: 116 EISGGDPRGLGLSEAVVYRRVLVGLAIPQADVIIEPSSMNTWQNAQFSQPLLRAYRPDRI 175
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+LVSSA HL R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+G+
Sbjct: 176 VLVSSATHLCRAELYFRHFGIDATPVRADWLTATWSILPQSYNFTLADVALHEYLGMARY 235
Query: 237 YY 238
+
Sbjct: 236 WL 237
>gi|188575890|ref|YP_001912819.1| transmembrane [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520342|gb|ACD58287.1| transmembrane [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 253
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 142/242 (58%), Gaps = 9/242 (3%)
Query: 1 MLLSWIFLIVSYWHLL----CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
M+L+ + ++ + L+ + ++ ++ +L+F+ +G G +P+ +L HLQ +
Sbjct: 1 MMLALVCVLFGFAWLIDRLGLRRFSRVLGLTSVLLVFA-VGCGPLPSWMLHHLQHTGVND 59
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ N+IVLLG GT A+ E + +Y RI E+ RLY+ C+ C I
Sbjct: 60 FNA---WGARNVIVLLGAGTVRPEGRDAV-AEANMFAYGRIVESARLYQQCRHSGGDCKI 115
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
ISGGDP+ GL+E++VY L++ + + D+ +E S++T QNAQFS +++ + I
Sbjct: 116 EISGGDPRGLGLSEAVVYRRVLVDLAIPQADVIMEPSSMNTLQNAQFSQPLLRAYRPDRI 175
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+LVSSA HL R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+G+
Sbjct: 176 VLVSSATHLCRAELYFRHFGIDATPVRADWLTATWSILPQSYNFTLADVALHEYLGMARY 235
Query: 237 YY 238
Sbjct: 236 RL 237
>gi|289661763|ref|ZP_06483344.1| hypothetical protein XcampvN_01352 [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 253
Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 143/242 (59%), Gaps = 9/242 (3%)
Query: 1 MLLSWIFLIVSYWHLL----CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
M+L+ + ++ + L+ + + ++ ++ +L+F+ +G G +P+ +L+ LQ +
Sbjct: 1 MMLALVCVLFGFAWLIDRRGLRRLSRVLGLTSLLLVFA-VGCGPLPSWMLQRLQHTGVND 59
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ N+IVLLG GT A+ E + +Y RI E+ RLY+ C+ C I
Sbjct: 60 FNA---WGGRNVIVLLGAGTVRPEGRDAV-AEANMFAYGRIVESARLYQQCRHSGGDCKI 115
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
ISGGD + GL+E++VY L+ + + D+ LE S++T+QNAQFS +++ + I
Sbjct: 116 EISGGDARGLGLSEAVVYQRVLVGLAIPQADLILEPSSMNTWQNAQFSQPLLRAYRPDRI 175
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+LVSSA HL+R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 176 VLVSSATHLRRAELYFRHFGIDATPVRADWLTASWSILPQSYNFTLADVALHEYLGIARY 235
Query: 237 YY 238
Sbjct: 236 QL 237
>gi|289668714|ref|ZP_06489789.1| hypothetical protein XcampmN_09524 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 253
Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 142/242 (58%), Gaps = 9/242 (3%)
Query: 1 MLLSWIFLIVSYWHLL----CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
M+L+ + ++ + L+ + ++ ++ +L+F+ +G G +P+ +L+ LQ +
Sbjct: 1 MMLALVCVLFGFAWLIDRRGLRRFSRVLGLTSLLLVFA-VGCGPLPSWMLQRLQHTGVND 59
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ N+IVLLG GT A+ E + +Y RI E+ RLY+ C+ C I
Sbjct: 60 FNA---WGGRNVIVLLGAGTVRPEGRDAV-AEANMFAYGRIVESARLYQQCRHSGGDCKI 115
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
ISGGD + GL+E++VY L+ + + D+ LE S++T+QNAQFS +++ + I
Sbjct: 116 EISGGDARGLGLSEAVVYQRVLVGLAIPQADLILEPSSMNTWQNAQFSQPLLRAYRPDRI 175
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+LVSSA HL+R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 176 VLVSSATHLRRAELYFRHFGIDATPVRADWLTASWSILPQSYNFTLADVALHEYLGIARY 235
Query: 237 YY 238
Sbjct: 236 QL 237
>gi|21242461|ref|NP_642043.1| hypothetical protein XAC1712 [Xanthomonas axonopodis pv. citri str.
306]
gi|21107907|gb|AAM36579.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 253
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 89/249 (35%), Positives = 146/249 (58%), Gaps = 13/249 (5%)
Query: 1 MLLSWIFLIVSYWHLL----CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
M+L+ + ++ + L+ + ++ ++ +L+F+ +G G +P+ +L+HLQ +
Sbjct: 1 MMLALVCVLFGFAWLIDRRGLRRFSRVLGLASLLLVFA-VGCGPLPSWMLQHLQRTGVND 59
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ N+IVLLG GT A+ E + +Y RI E+ RLY C+ C I
Sbjct: 60 FNA---WGARNVIVLLGAGTVRPEGRDAV-AEANLFAYGRIVESARLYWQCRHSGGDCKI 115
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
ISGGD + GL+E++VY LL G+ R D+ +E S++T+QNAQFS ++++ + I
Sbjct: 116 EISGGDARGLGLSEAVVYQRVLLGLGIPRADLIMEPSSMNTWQNAQFSQPLLRDYRPDRI 175
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI--- 233
LVSSA HL+R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 176 ALVSSATHLRRAELYFRHFGIDATPVRADWLTATWSILPQSYNFTLADVALHEYLGIARY 235
Query: 234 -LIAYYRGN 241
+ + N
Sbjct: 236 QVYQWLGWN 244
>gi|218709695|ref|YP_002417316.1| hypothetical protein VS_1706 [Vibrio splendidus LGP32]
gi|218322714|emb|CAV18890.1| conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 253
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 94/228 (41%), Positives = 129/228 (56%), Gaps = 4/228 (1%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
LL F + LF IG G+IP LL LQ +Y+R QW N IV
Sbjct: 14 GVTRLLQWRKTSSFIKLLLISLFVLIGSGLIPRYLLNDLQANYER-KPDIQWTSH-NAIV 71
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
LLG GT +I + EP+F S+ RI ET YK+C + C +I+SGGD Q +G+ E
Sbjct: 72 LLGAGTQLIAST--QEFEPTFFSFGRINETASQYKNCAKAQTICKVIVSGGDAQNNGVTE 129
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ VY +LL GV R DI E S++T++NAQ +S ++K+ Q NI+LVSS H++RS+L
Sbjct: 130 AEVYQQQLLRLGVPRADIIQEPNSVNTWKNAQLTSDLMKHHQFDNIVLVSSGLHIRRSEL 189
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
YF HFG+N +DY+ A S +PL NF +T+ AL E +G
Sbjct: 190 YFNHFGLNVIPLRADYMAAQISWLPLWYNFAVTDFALHEQLGFARYNL 237
>gi|148975915|ref|ZP_01812704.1| hypothetical protein VSWAT3_06376 [Vibrionales bacterium SWAT-3]
gi|145964660|gb|EDK29913.1| hypothetical protein VSWAT3_06376 [Vibrionales bacterium SWAT-3]
Length = 253
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 94/223 (42%), Positives = 124/223 (55%), Gaps = 4/223 (1%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
LL F + F IG G IP LL LQ +Y+ S D N IVLLG
Sbjct: 17 RLLQWRATSTFLSLVLISSFVLIGSGFIPRYLLDDLQANYES--KSENQWSDNNAIVLLG 74
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
GT +I + EP+F SY RI ET YK C + C +IISGGD Q +G+ E+ +
Sbjct: 75 AGTQLIKST--QEFEPAFFSYGRISETASQYKDCAKSDTKCKVIISGGDAQGNGVTEAEI 132
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y +LL GV + DI E S++T++NAQ +S ++K+ Q NIILVSS H++RS+LYF
Sbjct: 133 YEQQLLRLGVPKADIIQEPNSVNTWKNAQLTSDLMKHHQFDNIILVSSGLHIRRSELYFN 192
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
HFG+ SDY+ A S +PL NF +T+ AL E IG
Sbjct: 193 HFGLEVIPVRSDYMAAQISWLPLWYNFAVTDFALHEQIGFARY 235
>gi|325924933|ref|ZP_08186362.1| hypothetical protein XPE_0280 [Xanthomonas perforans 91-118]
gi|325544656|gb|EGD16010.1| hypothetical protein XPE_0280 [Xanthomonas perforans 91-118]
Length = 253
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 89/249 (35%), Positives = 145/249 (58%), Gaps = 13/249 (5%)
Query: 1 MLLSWIFLIVSYWHLL----CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
M+L+ + ++ + L+ + ++ ++ +L+F+ +G G +P+ +L+HLQ +
Sbjct: 1 MMLALVCVLFGFAWLIDRRGLRRFSRVLGLASLLLVFA-VGCGPLPSWMLQHLQRTGVND 59
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ N+IVLLG GT A+ E + +Y RI E+ RLY C+ C I
Sbjct: 60 FNA---WGARNVIVLLGAGTVRPEGRDAV-AEANLFAYGRIVESARLYWQCRHSGGDCKI 115
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
ISGGD + GL+E++VY LL G+ R D+ +E S++T+QNAQFS +++ + I
Sbjct: 116 EISGGDARGLGLSEAVVYQRVLLGLGIPRADLIMEPSSMNTWQNAQFSQPLLRAYRPDRI 175
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI--- 233
LVSSA HL+R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 176 ALVSSATHLRRAELYFRHFGIDATPVRADWLTATWSILPQSYNFTLADVALHEYLGIARY 235
Query: 234 -LIAYYRGN 241
+ + N
Sbjct: 236 QVYQWLGWN 244
>gi|83745961|ref|ZP_00943017.1| Integral membrane protein [Ralstonia solanacearum UW551]
gi|83727355|gb|EAP74477.1| Integral membrane protein [Ralstonia solanacearum UW551]
Length = 265
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 86/239 (35%), Positives = 132/239 (55%), Gaps = 9/239 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQ-RPLL 58
+ + ++ +IV+ L + R ++ L LF IG G +P LL L+ ++ RP +
Sbjct: 17 LPVLFLLVIVTAICALRRQRRTARGLAVVSLALFVAIGCGPVPAWLLDSLEGPFEARPAV 76
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ N IVLLG GT + +EP SY R+ E + Y++C++ C I++
Sbjct: 77 A---WGKRNAIVLLGAGTRRVDG----GVEPGVFSYPRLMEAAQQYQACRKTDADCKILV 129
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGGD + HG E+ VY L G++ D+ LE S++T+QNAQFS + + + +L
Sbjct: 130 SGGDARHHGDPEAAVYRRALQAIGIDAGDVLLEPNSMNTWQNAQFSRAALAAYAPERTVL 189
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
VSSA HL+RS LYF HFG+ +D L A S +PL+ NF +T+ AL E+IGI +
Sbjct: 190 VSSAIHLRRSLLYFTHFGMTPTPVRADDLQATPSPLPLAINFAMTDYALHEWIGIARYH 248
>gi|294626655|ref|ZP_06705252.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294665846|ref|ZP_06731114.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292599075|gb|EFF43215.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292604356|gb|EFF47739.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 252
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 88/248 (35%), Positives = 145/248 (58%), Gaps = 13/248 (5%)
Query: 2 LLSWIFLIVSYWHLL----CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
+L+ + ++ + L+ + ++ ++ +L+F+ +G G +P+ +L+HLQ +
Sbjct: 1 MLALVCVLFGFAWLIDRRGLRRFSRVLGLASLLLVFA-VGCGPLPSWMLQHLQRTGVNDF 59
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ N+IVLLG GT A+ E + +Y RI E+ RLY C+ C I
Sbjct: 60 NA---WGARNVIVLLGAGTVRPEGRDAV-AEANLFAYGRIVESARLYWQCRHSGGDCKIE 115
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGGD + GL+E++VY LL G+ R D+ +E S++T+QNAQFS ++++ + I
Sbjct: 116 ISGGDARGLGLSEAVVYQRVLLGLGIPRADLIMEPSSMNTWQNAQFSQPLLRDYRPDRIA 175
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI---- 233
LVSSA HL+R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 176 LVSSATHLRRAELYFRHFGIDATPVRADWLTATWSILPQSYNFTLADVALHEYLGIARYQ 235
Query: 234 LIAYYRGN 241
+ + N
Sbjct: 236 VYQWLGWN 243
>gi|207742020|ref|YP_002258412.1| lipoprotein [Ralstonia solanacearum IPO1609]
gi|206593406|emb|CAQ60333.1| lipoprotein [Ralstonia solanacearum IPO1609]
Length = 251
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 86/239 (35%), Positives = 132/239 (55%), Gaps = 9/239 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQ-RPLL 58
+ + ++ +IV+ L + R ++ L LF IG G +P LL L+ ++ RP +
Sbjct: 3 LPVLFLLVIVTAICALRRQRRTARGLAVVSLALFVAIGCGPVPAWLLDSLEGPFEARPAV 62
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ N IVLLG GT + +EP SY R+ E + Y++C++ C I++
Sbjct: 63 A---WGKRNAIVLLGAGTRRVDG----GVEPGVFSYPRLMEAAQQYQACRKTDADCKILV 115
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGGD + HG E+ VY L G++ D+ LE S++T+QNAQFS + + + +L
Sbjct: 116 SGGDARHHGDPEAAVYRRALQAIGIDAGDVLLEPNSMNTWQNAQFSRAALAAYAPERTVL 175
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
VSSA HL+RS LYF HFG+ +D L A S +PL+ NF +T+ AL E+IGI +
Sbjct: 176 VSSAIHLRRSLLYFTHFGMTPTPVRADDLQATPSPLPLAINFAMTDYALHEWIGIARYH 234
>gi|207727627|ref|YP_002256021.1| lipoprotein [Ralstonia solanacearum MolK2]
gi|206590866|emb|CAQ56478.1| lipoprotein [Ralstonia solanacearum MolK2]
Length = 251
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 86/239 (35%), Positives = 132/239 (55%), Gaps = 9/239 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQ-RPLL 58
+ + ++ +IV+ L + R ++ L LF IG G +P LL L+ ++ RP +
Sbjct: 3 LPVLFLLVIVTAICALRRQRRTARGLAVVSLALFVAIGCGPVPAWLLDSLEGPFEARPAV 62
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ N IVLLG GT + +EP SY R+ E + Y++C++ C I++
Sbjct: 63 A---WGKRNAIVLLGAGTRRVDG----GVEPGVFSYPRLMEAAQQYQACRKTDADCKILV 115
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGGD + HG E+ VY L G++ D+ LE S++T+QNAQFS + + + +L
Sbjct: 116 SGGDARHHGDPEAAVYRRALQAIGIDAGDVLLEPNSMNTWQNAQFSRAALAAYAPERTVL 175
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
VSSA HL+RS LYF HFG+ +D L A S +PL+ NF +T+ AL E+IGI +
Sbjct: 176 VSSAIHLRRSLLYFTHFGMTPTPVRADDLQATPSPLPLAINFAMTDYALHEWIGIARYH 234
>gi|78047302|ref|YP_363477.1| hypothetical protein XCV1746 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035732|emb|CAJ23423.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 252
Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats.
Identities = 88/248 (35%), Positives = 144/248 (58%), Gaps = 13/248 (5%)
Query: 2 LLSWIFLIVSYWHLL----CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
+L+ + ++ + L+ + ++ ++ +L+F+ +G G +P+ +L+HLQ +
Sbjct: 1 MLALVCVLFGFAWLIDRRGLRRFSRVLGLASLLLVFA-VGCGPLPSWMLQHLQRTGVNDF 59
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ N+IVLLG GT A+ E + +Y RI E+ RLY C+ C I
Sbjct: 60 NA---WGARNVIVLLGAGTVRPEGRDAV-AEANLFAYGRIVESARLYWQCRHSGGDCKIE 115
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGGD + GL+E++VY LL G+ R D+ +E S++T+QNAQFS +++ + I
Sbjct: 116 ISGGDARGLGLSEAVVYQRVLLGLGIPRADLIMEPSSMNTWQNAQFSQPLLRAYRPDRIA 175
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI---- 233
LVSSA HL+R++LYF+HFGI+ +D+L A +SI+P S NF L ++AL EY+GI
Sbjct: 176 LVSSATHLRRAELYFRHFGIDATPVRADWLTATWSILPQSYNFTLADVALHEYLGIARYQ 235
Query: 234 LIAYYRGN 241
+ + N
Sbjct: 236 VYQWLGWN 243
>gi|299068290|emb|CBJ39511.1| putative lipoprotein transmembrane [Ralstonia solanacearum CMR15]
Length = 251
Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats.
Identities = 87/239 (36%), Positives = 132/239 (55%), Gaps = 9/239 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQ-RPLL 58
+ + ++ +IV+ L Q R ++ L L IG G +P LL L+ ++ RP++
Sbjct: 3 LPVLFLLVIVTAICALRQRRRTARGLAAVSLALVIAIGCGPVPAWLLDSLEGPFEARPVV 62
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ N IVLLG GT + +EP SY R+ E + Y++C++ C I++
Sbjct: 63 T---WGKRNAIVLLGAGTRRVEG----GVEPGVFSYPRLMEAAQQYQACRKTGADCKILV 115
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGGD + HG E+ VY L G+ DD+ LE S++T+QNAQFS + + + +L
Sbjct: 116 SGGDARHHGDPEAAVYQRALQAIGIGADDVLLEPNSMNTWQNAQFSRTALAAYAPERTVL 175
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
VSSA HL+RS LYF HFG+ +D L A S +PL+ NF +T+ AL E+IGI +
Sbjct: 176 VSSAIHLRRSLLYFAHFGMTPTPVRADDLQATPSPLPLAFNFAMTDYALHEWIGIARYH 234
>gi|309780144|ref|ZP_07674895.1| membrane protein [Ralstonia sp. 5_7_47FAA]
gi|308920847|gb|EFP66493.1| membrane protein [Ralstonia sp. 5_7_47FAA]
Length = 262
Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats.
Identities = 84/208 (40%), Positives = 122/208 (58%), Gaps = 6/208 (2%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+L IG G +P LL L+ ++ QW N IVLLG GT + +EP
Sbjct: 45 VLVIAIGCGPVPAWLLDSLEKPFEN-EPHVQWGAR-NAIVLLGAGTFRV----GDSVEPG 98
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
SY R+ ET +LY++C++ C I++SGGD + HG E+ VY +L+ GV +DD+ +
Sbjct: 99 LFSYPRLVETTQLYQACRKSDGDCKILVSGGDARHHGSPEATVYQRELVRLGVAKDDVLI 158
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E QS++T+QNAQFS +++ +LVSSA HL+RS LYF HFG+ +D L A
Sbjct: 159 EPQSMNTWQNAQFSRTVLAQYGADRTVLVSSAIHLRRSLLYFTHFGMAPVPVRADDLQAA 218
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYY 238
S +P++ NF LT+ AL E+IGI +
Sbjct: 219 ASPLPMAYNFALTDFALHEWIGIARYHM 246
>gi|300705462|ref|YP_003747065.1| lipoprotein [Ralstonia solanacearum CFBP2957]
gi|299073126|emb|CBJ44484.1| putative lipoprotein transmembrane [Ralstonia solanacearum
CFBP2957]
Length = 251
Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats.
Identities = 86/239 (35%), Positives = 132/239 (55%), Gaps = 9/239 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQ-RPLL 58
+ + ++ +IV+ L + R ++ L LF IG G +P LL L+ ++ RP +
Sbjct: 3 LPVLFLLVIVTAICALRRQRRTARALAAVSLALFVAIGCGPVPAWLLDSLEGPFEARPAV 62
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ N IVLLG GT + +EP SY R+ E + Y++C++ C I++
Sbjct: 63 A---WGKRNAIVLLGAGTRRVDG----GVEPGVFSYPRLMEAAQQYQACRKTDADCKILV 115
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGGD + HG E+ VY L G++ D+ LE S++T+QNAQFS + + + +L
Sbjct: 116 SGGDARHHGDPEAAVYRRALQAIGIDAADVLLEPNSMNTWQNAQFSRTALAAYAPERTVL 175
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
VSSA HL+RS LYF HFG+ +D L A S +PL+ NF +T+ AL E+IGI +
Sbjct: 176 VSSAIHLRRSLLYFTHFGMTPTPVRADDLQATPSPLPLAINFAMTDYALHEWIGIARYH 234
>gi|187927155|ref|YP_001897642.1| hypothetical protein Rpic_0045 [Ralstonia pickettii 12J]
gi|187724045|gb|ACD25210.1| protein of unknown function DUF218 [Ralstonia pickettii 12J]
Length = 266
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 84/208 (40%), Positives = 122/208 (58%), Gaps = 6/208 (2%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+L IG G +P LL L+ ++ QW N IVLLG GT + +EP
Sbjct: 49 VLVIAIGCGPVPAWLLDSLEKPFEN-EPHVQWGAR-NAIVLLGAGTFRV----GDSVEPG 102
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
SY R+ ET +LY++C++ C I++SGGD + HG E+ VY +L+ GV +DD+ +
Sbjct: 103 LFSYPRLVETTQLYQACRKSDGDCKILVSGGDARHHGSPEATVYQRELVRLGVAKDDVLI 162
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E QS++T+QNAQFS +++ +LVSSA HL+RS LYF HFG+ +D L A
Sbjct: 163 EPQSMNTWQNAQFSRTVLAQYGADRTVLVSSAIHLRRSLLYFTHFGMAPVPVRADDLQAA 222
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYY 238
S +P++ NF LT+ AL E+IGI +
Sbjct: 223 ASPLPMAYNFALTDFALHEWIGIARYHM 250
>gi|149909508|ref|ZP_01898162.1| hypothetical protein PE36_16920 [Moritella sp. PE36]
gi|149807413|gb|EDM67364.1| hypothetical protein PE36_16920 [Moritella sp. PE36]
Length = 257
Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 93/233 (39%), Positives = 128/233 (54%), Gaps = 8/233 (3%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
FL++ +++ K + +LL I G+IP LL LQ Y +P +D
Sbjct: 13 FLVLRFFNF---HRAKSVLLCSTILLTVLISIGVIPKYLLDKLQQDYV--AQAPIHWQDN 67
Query: 67 NIIVLLGNGTTIIPTI--PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
N I+LLG G + IEP F ++SRI+ RLY C C II+SGGD Q
Sbjct: 68 NAIILLGAGLEKVGDTINNVDSIEPPFHAFSRIYAAARLYNECIGTEQQCKIIVSGGDTQ 127
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
K G E+ VY N+L+ G+ DI E SL+T+QNAQF+S ++ N +L+SS H
Sbjct: 128 KLGDTEAAVYKNRLVSIGINAADIITEPNSLNTWQNAQFTSDILSKGDFDNSVLISSGLH 187
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+KRSQLYF+HFG+ +DY++A S IPL NF LT+ AL E+IG Y
Sbjct: 188 IKRSQLYFEHFGVRATPIRADYMSATVSFIPLGYNFALTDFALHEWIG-FWRY 239
>gi|241661663|ref|YP_002980023.1| hypothetical protein Rpic12D_0039 [Ralstonia pickettii 12D]
gi|240863690|gb|ACS61351.1| protein of unknown function DUF218 [Ralstonia pickettii 12D]
Length = 251
Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 84/208 (40%), Positives = 122/208 (58%), Gaps = 6/208 (2%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+L IG G +P LL L+ ++ QW N IVLLG GT + +EP
Sbjct: 34 VLVIAIGCGPMPAWLLDSLEKPFEN-EPHIQWGTR-NAIVLLGAGTFRV----GDSVEPG 87
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
SY R+ ET +LY++C++ C I++SGGD + HG E+ VY +L+ GV +DD+ +
Sbjct: 88 LFSYPRLVETTQLYQACRKSDGDCKILVSGGDARHHGSPEATVYQRELVRLGVAKDDVLI 147
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E QS++T+QNAQFS +++ +LVSSA HL+RS LYF HFG+ +D L A
Sbjct: 148 EPQSMNTWQNAQFSRTVLAQYAPDRTVLVSSAIHLRRSLLYFTHFGMAPIPVRADDLQAA 207
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYY 238
S +P++ NF LT+ AL E+IGI +
Sbjct: 208 ASPLPMAYNFALTDFALHEWIGIARYHM 235
>gi|300692848|ref|YP_003753843.1| lipoprotein transmembrane [Ralstonia solanacearum PSI07]
gi|299079908|emb|CBM10289.1| putative lipoprotein transmembrane [Ralstonia solanacearum PSI07]
Length = 251
Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 87/239 (36%), Positives = 132/239 (55%), Gaps = 9/239 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQ-RPLL 58
+ + ++ +IV+ L + R ++ L LF IG G +P LL L+ ++ RP +
Sbjct: 3 LPVLFLLVIVTAICALRRQRRTARGLAVVSLALFIAIGCGPVPAWLLDSLEGPFEARPAV 62
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ N IVLLG GT + +EP SY R+ E + Y++C++ C I++
Sbjct: 63 A---WGKRNAIVLLGAGTRRVDG----GVEPGVFSYPRLMEAAQQYQACRKTGADCKILV 115
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGGD + HG E+ VY L G+ DD+ LE S++T+QNAQFS + + + +L
Sbjct: 116 SGGDARHHGDPEATVYQRALQAIGIGTDDVLLEPNSMNTWQNAQFSRAALAAYAPERTVL 175
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
VSSA HL+RS LYF HFG+ +D L A S +PL+ NF +T+ AL E+IGI +
Sbjct: 176 VSSAIHLRRSLLYFTHFGMMPTPMRADDLQATPSPLPLAINFAMTDYALHEWIGIARYH 234
>gi|33599364|ref|NP_886924.1| hypothetical protein BB0375 [Bordetella bronchiseptica RB50]
gi|33566960|emb|CAE30873.1| putative exported protein [Bordetella bronchiseptica RB50]
Length = 251
Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats.
Identities = 92/225 (40%), Positives = 132/225 (58%), Gaps = 8/225 (3%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W ++ R ++ +S ++LF +G G I LL LQ YQ P N IVLL
Sbjct: 18 WRQWRRASRMLYGLS--LVLFLALGCGPIAAWLLDGLQSDYQ--AKPPIAWGQRNAIVLL 73
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G GT A RIEP SY+RI E R Y C++ + C +I+SGGD HG AE+
Sbjct: 74 GAGTEQA----AGRIEPGIFSYARIVEAARRYHDCRKAAAQCKLIVSGGDAAYHGDAEAN 129
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
VY + L+ GV+ D+ E S++T+QNAQF+S++++ ++LVSS HLKRS LYF
Sbjct: 130 VYRDPLVALGVDAADVLPEPGSMNTWQNAQFTSAVLRRYDADRVVLVSSGIHLKRSALYF 189
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
HFG+ +DYL+A +S++PLS NF + + AL EY+GI+ +
Sbjct: 190 AHFGVAATPVRADYLHARWSVVPLSYNFAVADFALHEYLGIVRYH 234
>gi|254252544|ref|ZP_04945862.1| hypothetical protein BDAG_01779 [Burkholderia dolosa AUO158]
gi|124895153|gb|EAY69033.1| hypothetical protein BDAG_01779 [Burkholderia dolosa AUO158]
Length = 303
Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 69/241 (28%), Positives = 123/241 (51%), Gaps = 14/241 (5%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSF-IGWGIIPTILLKHLQFSYQRPLLSPQW 62
S++ L + + +LC+ R+ ++ L + GW P I + P+ P+
Sbjct: 71 SFVLLFICF--MLCRKQRRFIAIAAVALFWLLSAGWLAAPLIAWAEAGVT---PVERPEM 125
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ +I L+G GT ++P +RI + LY++C+Q + HCT+++SGGD
Sbjct: 126 RGQTTLI-LIGAGTHRT----GTGLQPPPDGNARIVKIAALYRACRQRAAHCTVVMSGGD 180
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
PQ HG E+ VY +L+ G+ D+ LE S T++NA+F++S++++ ILV+S+
Sbjct: 181 PQHHGETEAAVYGRQLVAEGIAPADLVLEPNSRTTYENAKFTASILRSRHDDARILVTSS 240
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYR 239
Y ++R+ L F+ FGI+ + ++ +P N + AL E IGI +
Sbjct: 241 YQMRRALLDFRRFGIDPQPVYANRRTPRTGWLPRWRNLVNADQALHELIGIAQFHVYRRL 300
Query: 240 G 240
G
Sbjct: 301 G 301
>gi|170696469|ref|ZP_02887595.1| protein of unknown function DUF218 [Burkholderia graminis C4D1M]
gi|170138622|gb|EDT06824.1| protein of unknown function DUF218 [Burkholderia graminis C4D1M]
Length = 239
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 72/237 (30%), Positives = 118/237 (49%), Gaps = 7/237 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + + L + + ++ R + F + + GW P + L Q +P
Sbjct: 2 ILFTLLALFFAAIAIWKRARRPLLFCTIAIFWLLSAGWLTAPLLSLAQPQAQ----TSTP 57
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
IVLLG GT + P + +RI + + Y +CK+ + C++I+SG
Sbjct: 58 ARFAPRTAIVLLGGGTVYNRD---KVLVPPREVLARIAVSAKNYAACKRSATVCSVIVSG 114
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G+PQ+H E+ Y LL V R DI LE QSL T++NA+ S+++ + ++ILV+
Sbjct: 115 GNPQRHAATEADTYLPYLLREQVPRSDIVLENQSLTTYENARNVSAIVGQSRYDSLILVT 174
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
SAYH+ R+ L F+HFG+ + S A ++P +N E+AL E IGI +
Sbjct: 175 SAYHMPRAMLDFRHFGLEPQPLISSARRARLGVLPRYSNLANAEIALHELIGIAQYH 231
>gi|86146806|ref|ZP_01065126.1| hypothetical protein MED222_15709 [Vibrio sp. MED222]
gi|85835456|gb|EAQ53594.1| hypothetical protein MED222_15709 [Vibrio sp. MED222]
Length = 253
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 94/238 (39%), Positives = 133/238 (55%), Gaps = 4/238 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L I + V L F + LF IG G+IP LL LQ +Y+R
Sbjct: 4 IILLLILVFVGVTRLFQWRKTSSFIKLLLISLFILIGSGLIPRYLLNDLQANYER-KPDI 62
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
QW N I LLG GT +I + EP+F S+ RI ET YK+C + C +I+SG
Sbjct: 63 QWTSH-NAIFLLGAGTQLIAST--QEFEPTFFSFGRINETASQYKNCAKAQTICKVIVSG 119
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GD Q +G+ E+ VY +LL GV DI E+ S++T++NAQ +S ++K+ Q NI+LVS
Sbjct: 120 GDAQNNGVTEAEVYQQQLLRLGVPLADIIQESNSVNTWKNAQLTSDLMKHHQFDNIVLVS 179
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S H++RS+LYF HFG+N +DY+ A S +PL NF +T+ AL E +G
Sbjct: 180 SGLHIRRSELYFNHFGLNVIPVRADYMAAQISWLPLWYNFAVTDFALHEQLGFARYNL 237
>gi|160872133|ref|ZP_02062265.1| transmembrane [Rickettsiella grylli]
gi|159120932|gb|EDP46270.1| transmembrane [Rickettsiella grylli]
Length = 282
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 90/224 (40%), Positives = 129/224 (57%), Gaps = 4/224 (1%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
L + S +L + FIG G+IP LL +LQ +Y L +P K N I+LLG
Sbjct: 49 LFNLKKTSLMIGSIVILSYFFIGNGVIPAYLLHNLQSAYN--LSTPIHWKQKNTIILLGA 106
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
GT+ P IR PS ++SRI +T+ LY CK+ + CTI+ISGGDP +G E+ +Y
Sbjct: 107 GTSKDPKSNKIR--PSLFAFSRIIQTVLLYHKCKKANTICTILISGGDPLNNGNTEATIY 164
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
LL G+ DI+LETQS +T+QNA+FSS ++K ++LV+SA+ LKRS LYF
Sbjct: 165 QEALLSLGINAKDIQLETQSNNTYQNAKFSSFLLKKQDSSQLLLVNSAFTLKRSLLYFSF 224
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
F I SD++ ++ P+ NF + + + EY+GI Y
Sbjct: 225 FNIYPTPIASDFITIPFTRYPIGYNFAMNDFVIHEYVGIFRFYL 268
>gi|325923915|ref|ZP_08185510.1| hypothetical protein XGA_4563 [Xanthomonas gardneri ATCC 19865]
gi|325545597|gb|EGD16856.1| hypothetical protein XGA_4563 [Xanthomonas gardneri ATCC 19865]
Length = 253
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 81/240 (33%), Positives = 135/240 (56%), Gaps = 7/240 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSF---IGWGIIPTILLKHLQFSYQRPL 57
M+L+ + ++ L+ + + + + +G G + + +L LQ +
Sbjct: 1 MMLALVCVLFLLSWLIGRRRWRRSARALAAATLALLLLVGCGPLSSWMLHGLQQTGVNDF 60
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ N+IVLLG GT + P P E + +Y RI E+ RLY+ C+ H C I
Sbjct: 61 ND---WRARNMIVLLGAGT-VRPDGPDATAEANMFAYGRIVESARLYRQCRAHGGDCKIE 116
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGGD + GL+E++VY L+ G+++ D+ +E S++T+QNAQFS +++ + ++
Sbjct: 117 ISGGDARGLGLSEAVVYRKVLIGIGIDQADLIMEPSSMNTWQNAQFSQPLLRKYRADRVV 176
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
LVSSA HL+R++LYF+HFGI SD+L A ++ +P S NF + ++AL EY+GI
Sbjct: 177 LVSSATHLRRAELYFRHFGIEATPVRSDWLTASWAWLPQSYNFTVADVALHEYLGIARYR 236
>gi|170732816|ref|YP_001764763.1| hypothetical protein Bcenmc03_1466 [Burkholderia cenocepacia MC0-3]
gi|169816058|gb|ACA90641.1| protein of unknown function DUF218 [Burkholderia cenocepacia MC0-3]
Length = 260
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 70/241 (29%), Positives = 122/241 (50%), Gaps = 14/241 (5%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSF-IGWGIIPTILLKHLQFSYQRPLLSPQW 62
S++ L + + +LC+ R+ + L + GW P I + P+ P
Sbjct: 28 SFVLLFIGF--MLCRKQRRTISIVAAALFWLLATGWLAAPLIAWTEAGVT---PVEHPDM 82
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+I L+G GT + ++P +RI + LY++C+Q + CT+++SGGD
Sbjct: 83 HGRTTLI-LIGAGTHRTDS----GLQPPPDGVARIHKVAALYRTCRQQAERCTVVMSGGD 137
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
PQ HG E+ VY +L+ GV D+ LE S T++NA+F++S++++ +LV+S+
Sbjct: 138 PQHHGDTEAAVYGRQLVAQGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTSS 197
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYR 239
Y ++R+ L F+ FGI+ + ++ A +P N E AL E IGI + +
Sbjct: 198 YQMRRALLDFRRFGIDPQPVYANLRRAQTGWLPRWRNVANAEQALHELIGIAQFHVYRWL 257
Query: 240 G 240
G
Sbjct: 258 G 258
>gi|323525715|ref|YP_004227868.1| hypothetical protein BC1001_1372 [Burkholderia sp. CCGE1001]
gi|323382717|gb|ADX54808.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1001]
Length = 239
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 70/237 (29%), Positives = 118/237 (49%), Gaps = 7/237 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + + L + + ++ R + F + + GW P + L Q +P
Sbjct: 2 ILFTLLALFFAAILIWKRARRPLVFCTVALFWLLSTGWLTAPLLSLAQPQAE----TSAP 57
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
I+LLG GT + P + +RI + Y +CK+ + C++I+SG
Sbjct: 58 TRFAPRTAIILLGGGTVYNRD---KVLVPPREVMARIAVSAENYAACKRSATVCSVIVSG 114
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G+PQ+H E+ Y LL V R DI LE +SL T++NA+ S+++ + ++ILV+
Sbjct: 115 GNPQRHPATEADTYLPYLLREQVPRSDIVLENRSLTTYENARNVSAIVGQSRYDSLILVT 174
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
SAYH+ R+ L F+HFG+ + S A+ ++P +N ELAL E +GI +
Sbjct: 175 SAYHMPRALLDFRHFGLEPQPLISGARRAHLGLLPRYSNLANAELALHELVGIAQYH 231
>gi|33595083|ref|NP_882726.1| hypothetical protein BPP0372 [Bordetella parapertussis 12822]
gi|33565160|emb|CAE35956.1| putative exported protein [Bordetella parapertussis]
Length = 251
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 91/225 (40%), Positives = 130/225 (57%), Gaps = 8/225 (3%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W ++ R ++ +S ++LF +G G I LL LQ YQ P N IVLL
Sbjct: 18 WRQWRRASRMLYGLS--LVLFLALGCGPIAAWLLDGLQSDYQ--AKPPIAWGQRNAIVLL 73
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G GT A RIEP SY+RI E R Y C++ + C +I SGGD HG AE+
Sbjct: 74 GAGTEQA----AGRIEPGIFSYARIVEAARRYHDCRKAAAQCKLIASGGDAAYHGDAEAN 129
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
VY + L+ GV+ D+ E S++T+QNAQF+S++++ ++LVSS HLKRS LYF
Sbjct: 130 VYRDPLVALGVDAADVLPEPGSMNTWQNAQFTSAVLRRYDADRVVLVSSGIHLKRSALYF 189
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+FG+ +DYL+A S++PLS NF + + AL EY+GI+ +
Sbjct: 190 AYFGVAATPVRADYLHARRSVVPLSYNFAVADFALHEYLGIVRYH 234
>gi|83720198|ref|YP_443090.1| hypothetical protein BTH_I2573 [Burkholderia thailandensis E264]
gi|83654023|gb|ABC38086.1| Uncharacterized ACR, COG1434 family [Burkholderia thailandensis
E264]
Length = 301
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 72/244 (29%), Positives = 125/244 (51%), Gaps = 10/244 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFF-MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
++L F ++ LLC+ R F ++ + L I G + L+ L + +P+
Sbjct: 62 LILFNSFGLLFVVFLLCRKRRGAFAILAAGIALLWLIASGWLAAPLVA-LAQAGVQPVTH 120
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P + IV+LG G + A P + +RI +T LY +C++ + CT+++S
Sbjct: 121 PMMTGN-TAIVMLGAGIKRRDGVAA----PPHDALARIDKTAELYSACQRTAKRCTVVVS 175
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGDPQ G+ E+ Y LL GV D+ E+ S T++NA+F++ +++ ++ILV
Sbjct: 176 GGDPQVRGITEADTYAPYLLARGVANADLIRESSSHTTYENARFTAPILRAQHYDDLILV 235
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IA 236
+S+Y +KR+ L F+ FGI + ++ +A +P + N ELAL E IG+ +
Sbjct: 236 TSSYQMKRALLDFRRFGIVPQPVYANRRDARLGWLPRAVNLVNAELALHEIIGVAQFHVY 295
Query: 237 YYRG 240
G
Sbjct: 296 RRLG 299
>gi|161524938|ref|YP_001579950.1| hypothetical protein Bmul_1765 [Burkholderia multivorans ATCC
17616]
gi|160342367|gb|ABX15453.1| protein of unknown function DUF218 [Burkholderia multivorans ATCC
17616]
Length = 281
Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats.
Identities = 72/242 (29%), Positives = 125/242 (51%), Gaps = 14/242 (5%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI-GWGIIPTILLKHLQFSYQRPLLSPQW 62
S++ L + + LLC+ R+ ++ L + GW P I P+ P
Sbjct: 49 SFVLLFIGF--LLCRKQRRRIALAAVALFWLIASGWLAAPFIAWAEAGVE---PVEHPDM 103
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++++LG GT + P +RI + LY+SC++ + CT+++SGGD
Sbjct: 104 HGQ-TVLIVLGAGTQRADD----GLRPPRDGAARIRKAAELYRSCRRQAERCTVVMSGGD 158
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
PQ HG E+ VY L+ +GV+ D+ LE +S T++NAQF++S++++ + IL++S+
Sbjct: 159 PQHHGDTEAAVYGRGLVAAGVDPGDLVLEPKSRTTYENAQFTTSILRSRRDDARILITSS 218
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYR 239
Y ++R+ L F+ FGI+ + ++ A +P +N TE AL E IGI +
Sbjct: 219 YQMRRALLDFRRFGIDPQPVFANRREAQTGWLPRWSNVVATEFALHELIGIAQFHVYRLI 278
Query: 240 GN 241
G
Sbjct: 279 GR 280
>gi|17544865|ref|NP_518267.1| lipoprotein transmembrane [Ralstonia solanacearum GMI1000]
gi|17427154|emb|CAD13674.1| probable lipoprotein transmembrane [Ralstonia solanacearum GMI1000]
Length = 251
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 128/241 (53%), Gaps = 11/241 (4%)
Query: 1 MLLSWIFLIVSYWHL---LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RP 56
M L +FL+V + + + + L IG G +P LL L+ ++ RP
Sbjct: 1 MSLPVLFLLVIVTAICALRRRRRTARGLAAVSLALVIAIGCGPVPAWLLDSLEGPFEARP 60
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
++ N IVLLG GT + +EP SY R+ E + Y++C++ C I
Sbjct: 61 AVT---WGKRNAIVLLGAGTRRVEG----GVEPGVFSYPRLMEAAQQYQACRKTGADCKI 113
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++SGGD + HG E+ VY LL G+ DD+ LE S++T+QNAQFS + + +
Sbjct: 114 LVSGGDARHHGDPEATVYQRALLAIGIGADDVLLEPNSMNTWQNAQFSRTALAAYAPERT 173
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+LVSSA HL+RS LYF HFG+ +D L A S +PL+ NF + + AL E+IGI
Sbjct: 174 VLVSSAIHLRRSLLYFAHFGMTPTPVRADDLQATPSPLPLAFNFAMADYALHEWIGIARY 233
Query: 237 Y 237
+
Sbjct: 234 H 234
>gi|307730038|ref|YP_003907262.1| hypothetical protein BC1003_2008 [Burkholderia sp. CCGE1003]
gi|307584573|gb|ADN57971.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1003]
Length = 225
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 7/221 (3%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
++ R + + + GW P + L P I+LLG GT
Sbjct: 4 KRARRPLLYCTIAFFWLLSAGWLTAPLLSLA----QPVAQTSPPASFAPRTAIILLGGGT 59
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ P + +RI + R Y +CK+ + CT+I+SGG+PQ+H +E+ Y
Sbjct: 60 VYNRD---KVLVPPREVLARIDVSARNYAACKRTATVCTVIVSGGNPQRHPASEADTYLP 116
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
LL V R DI LE QSL T++NA+ S+++ + ++ILV+SAYH+ R+ L F+HFG
Sbjct: 117 YLLREQVPRSDIVLENQSLTTYENARNVSAIVGQSRYDSLILVTSAYHMPRALLDFRHFG 176
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ + S A ++P +N E+AL E IGI +
Sbjct: 177 LDPQPLISSARRARLGVLPRYSNLANAEIALHELIGIAQYH 217
>gi|167587349|ref|ZP_02379737.1| hypothetical protein BuboB_18529 [Burkholderia ubonensis Bu]
Length = 224
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 72/220 (32%), Positives = 116/220 (52%), Gaps = 9/220 (4%)
Query: 15 LLCQSIRKIFFMSCFMLLFSF-IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+LC+ R+ F L + GW P I + P+ P +++LLG
Sbjct: 1 MLCRKWRRTIAAVAFALFWLLATGWLAAPLIAWSQAGVT---PVEHPDMHGQ-TVLILLG 56
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
GT I R+EP + RI +T LY+ C+Q + CT+I+SGGDP++HG E+
Sbjct: 57 TGTRRIDG----RLEPRTDGFPRIRKTAALYRDCRQRAERCTVIVSGGDPERHGATEAAT 112
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y L+ GV+ D+ LE S T++NA+F++ ++++ ILV+S+Y ++R+ L F+
Sbjct: 113 YAPYLVARGVDPRDLMLEANSRTTYENAKFTTPILRSRHVDATILVTSSYQMRRALLDFR 172
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
HFGI+ + ++ +A +P N E AL E IGI
Sbjct: 173 HFGIDAQPVYANRRDAQTGWLPRRQNLINAEHALHELIGI 212
>gi|189350313|ref|YP_001945941.1| hypothetical protein BMULJ_01475 [Burkholderia multivorans ATCC
17616]
gi|189334335|dbj|BAG43405.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
Length = 238
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 73/245 (29%), Positives = 126/245 (51%), Gaps = 12/245 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI-GWGIIPTILLKHLQFSYQRPLLS 59
M+L F+++ LLC+ R+ ++ L + GW P I P+
Sbjct: 1 MILFDSFVLLFIGFLLCRKQRRRIALAAVALFWLIASGWLAAPFIAWAEAGVE---PVEH 57
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P ++++LG GT + P +RI + LY+SC++ + CT+++S
Sbjct: 58 PDMHGQ-TVLIVLGAGTQRADD----GLRPPRDGAARIRKAAELYRSCRRQAERCTVVMS 112
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGDPQ HG E+ VY L+ +GV+ D+ LE +S T++NAQF++S++++ + IL+
Sbjct: 113 GGDPQHHGDTEAAVYGRGLVAAGVDPGDLVLEPKSRTTYENAQFTTSILRSRRDDARILI 172
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IA 236
+S+Y ++R+ L F+ FGI+ + ++ A +P +N TE AL E IGI +
Sbjct: 173 TSSYQMRRALLDFRRFGIDPQPVFANRREAQTGWLPRWSNVVATEFALHELIGIAQFHVY 232
Query: 237 YYRGN 241
G
Sbjct: 233 RLIGR 237
>gi|167562950|ref|ZP_02355866.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis EO147]
Length = 240
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 70/234 (29%), Positives = 121/234 (51%), Gaps = 7/234 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIR-KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
M+L F ++ LLC+ R I + + L I G + L+ + RP+
Sbjct: 1 MILFNTFGLLFVVFLLCRKRRGAIAILVAGVALLWLIASGWLAAPLVTLAESG-VRPVAR 59
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P + IV+LG G + A P+ + +RI +T LY +C++ + CT+++S
Sbjct: 60 PTMTGN-TAIVMLGAGIKRRDGVAA----PTHDALARIDKTAELYSACQRTAARCTVVVS 114
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGDPQ G+ E+ Y LL GV D+ E +S T++NA+F++++++ ++ILV
Sbjct: 115 GGDPQFRGITEADTYARYLLARGVANGDLIREQRSHTTYENARFTAAILRAQHYDDLILV 174
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+S+Y ++R+ L F FGI + ++ A + +P + N E AL E +GI
Sbjct: 175 TSSYQMRRALLDFARFGIAPQPVYANRRVAQFGWLPRTGNLVNAEQALHEILGI 228
>gi|167570139|ref|ZP_02363013.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis C6786]
Length = 240
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 70/234 (29%), Positives = 120/234 (51%), Gaps = 7/234 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIR-KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
M+L F ++ LLC+ R I + + L I G + L+ + RP+
Sbjct: 1 MILFNTFGLLFVVFLLCRKRRGAIAILVAGVALLWLIASGWLAAPLVALAESG-VRPVAR 59
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P + IV+LG G + A P+ + +RI +T LY +C++ + CT+++S
Sbjct: 60 PTMTGN-TAIVMLGAGIKRRDGVAA----PTHDALARIDKTAELYSACQRTAARCTVVVS 114
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGDPQ G+ E+ Y LL GV D+ E +S T++NA+F++++++ ++ILV
Sbjct: 115 GGDPQFRGITEADTYARYLLARGVANGDLIREQRSHTTYENARFTAAILRAQHYDDLILV 174
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+S+Y ++R+ L F FGI + ++ A +P + N E AL E +GI
Sbjct: 175 TSSYQMRRALLDFARFGIAPQPVYANRRVAQLGWLPRTGNLVNAEQALHEILGI 228
>gi|167620257|ref|ZP_02388888.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis Bt4]
Length = 240
Score = 191 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 73/244 (29%), Positives = 125/244 (51%), Gaps = 10/244 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFF-MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
M+L F ++ LLC+ R F ++ + L I G + L+ L + +P+
Sbjct: 1 MILFNSFGLLFVVFLLCRKRRGAFAILTAGIALLWLIASGWLAAPLVA-LAQAGVQPVTH 59
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P + IV+LG G + A P + +RI +T LY +C++ + CT+++S
Sbjct: 60 PMMTGN-TAIVMLGAGIKRRDGVAA----PPHDALARIDKTAELYSACQRTAKRCTVVVS 114
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGDPQ G+ E+ Y LL GV D+ E+ S T++NA+F++ +++ ++ILV
Sbjct: 115 GGDPQVRGITEADTYAPYLLARGVANADLIRESSSHTTYENARFTAPILRAQHYDDLILV 174
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IA 236
+S+Y +KR+ L F+ FGI + ++ +A +P + N ELAL E IG+ +
Sbjct: 175 TSSYQMKRALLDFRRFGIVPQPVYANRRDARLGWLPRAVNLVNAELALHEIIGVAQFHVY 234
Query: 237 YYRG 240
G
Sbjct: 235 RRLG 238
>gi|167582098|ref|ZP_02374972.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis TXDOH]
gi|257139318|ref|ZP_05587580.1| hypothetical protein BthaA_08969 [Burkholderia thailandensis E264]
Length = 240
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 72/234 (30%), Positives = 123/234 (52%), Gaps = 7/234 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFF-MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
M+L F ++ LLC+ R F ++ + L I G + L+ L + +P+
Sbjct: 1 MILFNSFGLLFVVFLLCRKRRGAFAILAAGIALLWLIASGWLAAPLVA-LAQAGVQPVTH 59
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P + IV+LG G + A P + +RI +T LY +C++ + CT+++S
Sbjct: 60 PMMTGN-TAIVMLGAGIKRRDGVAA----PPHDALARIDKTAELYSACQRTAKRCTVVVS 114
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGDPQ G+ E+ Y LL GV D+ E+ S T++NA+F++ +++ ++ILV
Sbjct: 115 GGDPQVRGITEADTYAPYLLARGVANADLIRESSSHTTYENARFTAPILRAQHYDDLILV 174
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+S+Y +KR+ L F+ FGI + ++ +A +P + N ELAL E IG+
Sbjct: 175 TSSYQMKRALLDFRRFGIVPQPVYANRRDARLGWLPRAVNLVNAELALHEIIGV 228
>gi|167566356|ref|ZP_02359272.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis EO147]
Length = 255
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 81/225 (36%), Positives = 127/225 (56%), Gaps = 9/225 (4%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNG 75
+ + F + +L F+ IG G +P LL+HLQ Y RP + + N IV+LG G
Sbjct: 21 RRRTSRASFAASAVLFFA-IGCGPVPAWLLRHLQAPYAARPAIE---WGERNAIVMLGLG 76
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK--QHSMHCTIIISGGDPQKHGLAESIV 133
T I A+ P SYSR+ E LY C+ + + C I++SGGD +++G+ E+ V
Sbjct: 77 TEKIAATGAVE--PGTFSYSRVVEAASLYHGCRKARANAGCKIVVSGGDARRNGVPEATV 134
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y + L+ G++ D+ E +S++T+QNAQF+ ++ + ++LV+S HL+RS LYF
Sbjct: 135 YRDALIGLGIDAADVLSEPRSMNTWQNAQFTRVVLAGYRADRVLLVTSGVHLRRSMLYFA 194
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
HFG+ ++YL A +PL+ NF +LAL EY+GI
Sbjct: 195 HFGVAAIPVRAEYLQAMLFPLPLAYNFSAADLALHEYLGIARYRL 239
>gi|221197747|ref|ZP_03570793.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221204695|ref|ZP_03577712.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221214890|ref|ZP_03587858.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221165117|gb|EED97595.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221175552|gb|EEE07982.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221181679|gb|EEE14080.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
Length = 238
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 70/245 (28%), Positives = 127/245 (51%), Gaps = 12/245 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI-GWGIIPTILLKHLQFSYQRPLLS 59
M+L F+++ LLC+ R+ ++ L + GW P + P+
Sbjct: 1 MILFDSFVLLFIGFLLCRKQRRRIALAAVALFWLIASGWLAAPFVAWAEAGVE---PVEH 57
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P ++++LG GT + P +RI + LY++C++ + CT+++S
Sbjct: 58 PDMHGQ-TVLIVLGAGTQRADD----GLRPPRDGAARIRKAAELYRTCRRQAERCTVVMS 112
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGDPQ HG E+ VY L+ +G++ D+ LE +S T++NAQF++S++++ + IL+
Sbjct: 113 GGDPQHHGDTEAAVYGRGLVAAGIDPGDLVLEPKSRTTYENAQFTTSILRSRRDDARILI 172
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IA 236
+S+Y ++R+ L F+ FGI+ + ++ A+ +P +N ELAL E IGI +
Sbjct: 173 TSSYQMRRALLDFRRFGIDPQPVFANRREAHTGWLPRWSNVVAAELALHELIGIAQFHVY 232
Query: 237 YYRGN 241
G
Sbjct: 233 RLIGR 237
>gi|107022563|ref|YP_620890.1| hypothetical protein Bcen_1009 [Burkholderia cenocepacia AU 1054]
gi|116689512|ref|YP_835135.1| hypothetical protein Bcen2424_1490 [Burkholderia cenocepacia
HI2424]
gi|105892752|gb|ABF75917.1| protein of unknown function DUF218 [Burkholderia cenocepacia AU
1054]
gi|116647601|gb|ABK08242.1| protein of unknown function DUF218 [Burkholderia cenocepacia
HI2424]
Length = 224
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 12/230 (5%)
Query: 15 LLCQSIRKIFFMSCFMLLFSF-IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+LC+ R+ + L + GW P I + P+ P +I L+G
Sbjct: 1 MLCRKQRRTISIVAAALFWLLATGWLAAPLIAWSEAGVT---PVEHPDMHGRTTLI-LIG 56
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
GT T ++P +RI + LY++C+Q + CT+++SGGDPQ HG E+ V
Sbjct: 57 AGTHRTDT----GVQPPPDGVARIHKVAALYRTCRQQAERCTVVMSGGDPQHHGDTEAAV 112
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y +L+ GV D+ LE S T++NA+F++S++++ +LV+S+Y ++R+ L F+
Sbjct: 113 YGRQLVAEGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTSSYQMRRALLDFR 172
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYRG 240
FGI+ + ++ A +P N E AL E +GI + + G
Sbjct: 173 RFGIDPQPVYANLRRAQTGWLPRWRNVANAEQALHELVGIAQFHVYRWLG 222
>gi|206559863|ref|YP_002230627.1| hypothetical protein BCAL1497 [Burkholderia cenocepacia J2315]
gi|198035904|emb|CAR51796.1| putative exported protein [Burkholderia cenocepacia J2315]
Length = 238
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 71/244 (29%), Positives = 122/244 (50%), Gaps = 12/244 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSF-IGWGIIPTILLKHLQFSYQRPLLS 59
M+L F+++ +LC+ R+ + L + GW P I + P+
Sbjct: 1 MILFDSFVLLFIGFMLCRKRRRTISIVAAALFWLLATGWLAAPLIAWSEAGVT---PVEH 57
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P +I L+G GT ++P +RI + LY++C+Q + CT+++S
Sbjct: 58 PDMHGRTTLI-LIGAGTLRTD----AGLQPPPDGAARIRKIAALYRTCRQQAERCTVVMS 112
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GGDPQ HG E+ VY +L+ GV D+ LE S T++NA+F++S++++ ILV
Sbjct: 113 GGDPQHHGDTEAAVYGRQLVAQGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARILV 172
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IA 236
+S+Y ++R+ L F+ FGI+ + ++ A +P N E AL E +GI +
Sbjct: 173 TSSYQMRRALLDFRRFGIDPQPVYANLRRAQTGWLPRWRNVANAEHALHELVGIAQFHVY 232
Query: 237 YYRG 240
+ G
Sbjct: 233 RWLG 236
>gi|134295565|ref|YP_001119300.1| hypothetical protein Bcep1808_1457 [Burkholderia vietnamiensis G4]
gi|134138722|gb|ABO54465.1| protein of unknown function DUF218 [Burkholderia vietnamiensis G4]
Length = 224
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 69/224 (30%), Positives = 116/224 (51%), Gaps = 9/224 (4%)
Query: 15 LLCQSIRKIFFMSCFMLLFSF-IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+LC+ R+ ++ + + GW P I + P+ P +IV LG
Sbjct: 1 MLCRKQRRHIAIAGAAVFWLLATGWLAAPLIAWSEAGVA---PVEHPDMHGRTTLIV-LG 56
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
GT + P +RI +T LY+ C++ ++ CT+++SGGDPQ+HG E+ V
Sbjct: 57 TGTRRSDN----GLRPPPDGEARIRKTAALYRVCREQTIRCTVVMSGGDPQRHGDTEAAV 112
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y LL GV D+ LE S T++NA+F++S++++ + ILV+S+Y ++R+ L F+
Sbjct: 113 YGRLLLAQGVAPADLILEPDSRTTYENAKFTASILRSQHDDSRILVTSSYQMRRALLDFR 172
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
HFGI+ + ++ A ++P N A+ E IGI Y
Sbjct: 173 HFGIDPQPVYANRRLAQCGLLPRWRNLAAANQAVHELIGIAQFY 216
>gi|217422760|ref|ZP_03454263.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|226200064|ref|ZP_03795613.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242312781|ref|ZP_04811798.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|254186269|ref|ZP_04892787.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|254194017|ref|ZP_04900449.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|254201133|ref|ZP_04907498.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|254262741|ref|ZP_04953606.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
gi|254301320|ref|ZP_04968764.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|254359227|ref|ZP_04975499.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|147748745|gb|EDK55820.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|148028414|gb|EDK86374.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|157811319|gb|EDO88489.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|157933955|gb|EDO89625.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|169650768|gb|EDS83461.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|217394991|gb|EEC35010.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|225927916|gb|EEH23954.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242136020|gb|EES22423.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|254213743|gb|EET03128.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
Length = 298
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 82/240 (34%), Positives = 130/240 (54%), Gaps = 8/240 (3%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSP 60
LL+ + L+ + + + F IG G++P LL+ LQ Y RP +
Sbjct: 48 LLTVVALVAALLRFTKRRRASRALFVATVAAFFAIGCGLVPAWLLRALQAPYAARPAIE- 106
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS--MHCTIII 118
+ N IV+LG GT I A+ P SYSR+ E LY+ C++ C I++
Sbjct: 107 --WGERNAIVMLGLGTEKIAATGAVE--PGTFSYSRVVEAASLYRDCRRARADADCKILV 162
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGGD +++G+ E+ VY + L+ G++ D+ E +S++T+QNAQF+ + + ++L
Sbjct: 163 SGGDARRNGVPEASVYRDALVGVGIDAADVLSEPRSMNTWQNAQFTRVALDGYRADRVLL 222
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+S HL+RS LYF HFG+ A ++YL A +PL+ NF + +LAL EY+GI
Sbjct: 223 VTSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYRL 282
>gi|254185037|ref|ZP_04891626.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|184215629|gb|EDU12610.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
Length = 298
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 82/240 (34%), Positives = 130/240 (54%), Gaps = 8/240 (3%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSP 60
LL+ + L+ + + + F IG G++P LL+ LQ Y RP +
Sbjct: 48 LLTVVALVAALLRFTKRRRASRALFVATVAAFFAIGCGLVPAWLLRALQAPYAARPAIE- 106
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS--MHCTIII 118
+ N IV+LG GT I A+ P SYSR+ E LY+ C++ C I++
Sbjct: 107 --WGERNAIVMLGLGTEKIAATGAVE--PGTFSYSRVVEAASLYRDCRRARADADCKILV 162
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGGD +++G+ E+ VY + L+ G++ D+ E +S++T+QNAQF+ + + ++L
Sbjct: 163 SGGDARRNGVPEASVYRDALVGVGIDSADVLSEPRSMNTWQNAQFTRVALDGYRADRVLL 222
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+S HL+RS LYF HFG+ A ++YL A +PL+ NF + +LAL EY+GI
Sbjct: 223 VTSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYRL 282
>gi|167573468|ref|ZP_02366342.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
oklahomensis C6786]
Length = 255
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 81/225 (36%), Positives = 127/225 (56%), Gaps = 9/225 (4%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNG 75
+ + F + +L F+ IG G +P LL+HLQ Y RP + + N IV+LG G
Sbjct: 21 RRRTSRASFAASAVLFFA-IGCGPVPAWLLRHLQAPYAARPAIE---WGERNAIVMLGLG 76
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK--QHSMHCTIIISGGDPQKHGLAESIV 133
T I A+ P SYSR+ E LY C+ + + C I++SGGD +++G+ E+ V
Sbjct: 77 TEKIAATGAVE--PGTFSYSRVVEAASLYHGCRKARANAGCKIVVSGGDARRNGVPEATV 134
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y + L+ G++ D+ E +S++T+QNAQF+ ++ + ++LV+S HL+RS LYF
Sbjct: 135 YRDALIGLGIDAADVLSEPRSMNTWQNAQFTRVVLAGYRADRVLLVTSGVHLRRSVLYFA 194
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
HFG+ ++YL A +PL+ NF +LAL EY+GI
Sbjct: 195 HFGVAAIPVRAEYLQAMLFPLPLAYNFSAADLALHEYLGIARYRL 239
>gi|58582596|ref|YP_201612.1| hypothetical protein XOO2973 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58427190|gb|AAW76227.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 210
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 119/198 (60%), Gaps = 4/198 (2%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P+ +L HLQ + + N+IVLLG GT A+ E + +Y RI E+
Sbjct: 1 MPSWMLHHLQHTGVNDFNA---WGARNVIVLLGAGTVRPEGRDAV-AEANMFAYGRIVES 56
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
RLY+ C+ C I ISGGDP+ GL+E++VY L++ + + D+ +E S++T QN
Sbjct: 57 ARLYQQCRHSGGDCKIEISGGDPRGLGLSEAVVYRRVLVDLAIPQADVIMEPSSMNTLQN 116
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF 220
AQFS +++ + I+LVSSA HL R++LYF+HFGI+ +D+L A +SI+P S NF
Sbjct: 117 AQFSQPLLRAYRPDRIVLVSSATHLCRAELYFRHFGIDATPVRADWLTATWSILPQSYNF 176
Query: 221 YLTELALKEYIGILIAYY 238
L ++AL EY+G+
Sbjct: 177 TLADVALHEYLGMARYRL 194
>gi|188996942|ref|YP_001931193.1| protein of unknown function DUF218 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932009|gb|ACD66639.1| protein of unknown function DUF218 [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 242
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 69/242 (28%), Positives = 110/242 (45%), Gaps = 24/242 (9%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L IFLI++Y+ + + I S + I + LLK L+ +Q+P
Sbjct: 17 LFVLIFLIIAYFSRNNKRVLTISLASAISI--YLISIEPVKDFLLKPLEAKFQQPK---- 70
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
G++IV+LG G+ + S R+ L+K ++ II+SGG
Sbjct: 71 -NISGDVIVVLGGGSYNT-------GILTEDSLKRVLTGFVLHKR-----LNVPIILSGG 117
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ L ES + L E G+++ I + QS DT +NA F+ + K K +ILV+S
Sbjct: 118 SAITN-LPESEAMKSLLAELGIDKKMIFTDVQSRDTLENAFFTKKICKKYGYKTVILVTS 176
Query: 182 AYHLKRSQLYFQHFGINTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGILIAY 237
AYH+ RS + F+ G+N +D+ YS P + A++EYIG+ Y
Sbjct: 177 AYHMPRSYMTFKQAGLNVIPYPTDFKMDKKYTVYSYFPKMNVLQDSTKAIREYIGLFAYY 236
Query: 238 YR 239
R
Sbjct: 237 LR 238
>gi|53716341|ref|YP_106250.1| hypothetical protein BMAA1685 [Burkholderia mallei ATCC 23344]
gi|53722689|ref|YP_111674.1| hypothetical protein BPSS1669 [Burkholderia pseudomallei K96243]
gi|67640781|ref|ZP_00439576.1| putative membrane protein [Burkholderia mallei GB8 horse 4]
gi|76818145|ref|YP_335892.1| hypothetical protein BURPS1710b_A0733 [Burkholderia pseudomallei
1710b]
gi|121597067|ref|YP_991282.1| hypothetical protein BMASAVP1_1688 [Burkholderia mallei SAVP1]
gi|124381902|ref|YP_001025692.1| hypothetical protein BMA10229_1895 [Burkholderia mallei NCTC 10229]
gi|126442720|ref|YP_001063394.1| hypothetical protein BURPS668_A2400 [Burkholderia pseudomallei 668]
gi|126446879|ref|YP_001077768.1| hypothetical protein BMA10247_A0567 [Burkholderia mallei NCTC
10247]
gi|126458095|ref|YP_001076296.1| hypothetical protein BURPS1106A_A2263 [Burkholderia pseudomallei
1106a]
gi|166999439|ref|ZP_02265278.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
gi|167743403|ref|ZP_02416177.1| hypothetical protein Bpse14_35344 [Burkholderia pseudomallei 14]
gi|167820589|ref|ZP_02452269.1| hypothetical protein Bpse9_36024 [Burkholderia pseudomallei 91]
gi|167828952|ref|ZP_02460423.1| hypothetical protein Bpseu9_35016 [Burkholderia pseudomallei 9]
gi|167850424|ref|ZP_02475932.1| hypothetical protein BpseB_34607 [Burkholderia pseudomallei B7210]
gi|167908429|ref|ZP_02495634.1| hypothetical protein BpseN_39774 [Burkholderia pseudomallei NCTC
13177]
gi|167915704|ref|ZP_02502795.1| hypothetical protein Bpse112_34808 [Burkholderia pseudomallei 112]
gi|167923545|ref|ZP_02510636.1| hypothetical protein BpseBC_33634 [Burkholderia pseudomallei
BCC215]
gi|237508202|ref|ZP_04520917.1| putative membrane protein [Burkholderia pseudomallei MSHR346]
gi|254175884|ref|ZP_04882542.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|254205102|ref|ZP_04911455.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|52213103|emb|CAH39142.1| putative membrane protein [Burkholderia pseudomallei K96243]
gi|52422311|gb|AAU45881.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|76582618|gb|ABA52092.1| Uncharacterized ACR, COG1434 family [Burkholderia pseudomallei
1710b]
gi|121224865|gb|ABM48396.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|126222211|gb|ABN85716.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
gi|126231863|gb|ABN95276.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
gi|126239733|gb|ABO02845.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247]
gi|147754688|gb|EDK61752.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|160696926|gb|EDP86896.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|235000407|gb|EEP49831.1| putative membrane protein [Burkholderia pseudomallei MSHR346]
gi|238521564|gb|EEP85015.1| putative membrane protein [Burkholderia mallei GB8 horse 4]
gi|243064501|gb|EES46687.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
gi|261826553|gb|ABM99690.2| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
Length = 255
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 82/240 (34%), Positives = 130/240 (54%), Gaps = 8/240 (3%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSP 60
LL+ + L+ + + + F IG G++P LL+ LQ Y RP +
Sbjct: 5 LLTVVALVAALLRFTKRRRASRALFVATVAAFFAIGCGLVPAWLLRALQAPYAARPAIE- 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS--MHCTIII 118
+ N IV+LG GT I A+ P SYSR+ E LY+ C++ C I++
Sbjct: 64 --WGERNAIVMLGLGTEKIAATGAVE--PGTFSYSRVVEAASLYRDCRRARADADCKILV 119
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGGD +++G+ E+ VY + L+ G++ D+ E +S++T+QNAQF+ + + ++L
Sbjct: 120 SGGDARRNGVPEASVYRDALVGVGIDAADVLSEPRSMNTWQNAQFTRVALDGYRADRVLL 179
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+S HL+RS LYF HFG+ A ++YL A +PL+ NF + +LAL EY+GI
Sbjct: 180 VTSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYRL 239
>gi|134278721|ref|ZP_01765435.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|134250505|gb|EBA50585.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
Length = 255
Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 82/240 (34%), Positives = 129/240 (53%), Gaps = 8/240 (3%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSP 60
LL+ + L+ + + F IG G++P LL+ LQ Y RP +
Sbjct: 5 LLTVVALVAVLLRFTKRRRASRALFVATVAAFFAIGCGLVPAWLLRALQAPYAARPAIE- 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS--MHCTIII 118
+ N IV+LG GT I A+ P SYSR+ E LY+ C++ C I++
Sbjct: 64 --WGERNAIVMLGLGTEKIAATGAVE--PGTFSYSRVVEAASLYRDCRRARADADCKILV 119
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGGD +++G+ E+ VY + L+ G++ D+ E +S++T+QNAQF+ + + ++L
Sbjct: 120 SGGDARRNGVPEASVYRDALVGVGIDAADVLSEPRSMNTWQNAQFTRVALDGYRADRVLL 179
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+S HL+RS LYF HFG+ A ++YL A +PL+ NF + +LAL EY+GI
Sbjct: 180 VTSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYRL 239
>gi|78066102|ref|YP_368871.1| hypothetical protein Bcep18194_A4631 [Burkholderia sp. 383]
gi|77966847|gb|ABB08227.1| protein of unknown function DUF218 [Burkholderia sp. 383]
Length = 224
Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 67/229 (29%), Positives = 120/229 (52%), Gaps = 10/229 (4%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+LC+ R+I ++ + LF + G + L+ + P+ P+ +I L+G
Sbjct: 1 MLCRKRRRIISIAA-IALFWLLATGWLAAPLIAWTESG-VAPVEHPEMHGRTTLI-LIGA 57
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
GT ++P +RI + LY++C+Q + CT+++SGGDPQ HG E+ VY
Sbjct: 58 GTKRTD----FGLQPPPDGTARIHKVAALYRTCRQLAERCTVVMSGGDPQHHGETEAAVY 113
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+L+ G+ D+ LE S T++NA+F++S++++ ILV+S+Y ++R+ L F+
Sbjct: 114 GRQLVAEGIAPTDLVLEPDSRTTYENAKFTASILRSQYDDARILVTSSYQMRRALLDFRR 173
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYRG 240
FGI+ + ++ A +P N E AL E +GI + + G
Sbjct: 174 FGIDPQPVYANRRRAQTGWLPRWRNLTNAEQALHELVGIAQFHVYRWLG 222
>gi|167899018|ref|ZP_02486419.1| hypothetical protein Bpse7_35118 [Burkholderia pseudomallei 7894]
Length = 255
Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats.
Identities = 82/240 (34%), Positives = 130/240 (54%), Gaps = 8/240 (3%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSP 60
LL+ + L+ + + + F IG G++P LL+ LQ Y RP +
Sbjct: 5 LLTVVALVAALLRFTKRRRASRALFVATVAAFFAIGCGLVPAWLLRALQAPYAARPAIE- 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS--MHCTIII 118
+ N IV+LG GT I A+ P SYSR+ E LY+ C++ C I++
Sbjct: 64 --WGERNAIVMLGLGTEKIAATGAVE--PGTFSYSRVVEAASLYRDCRRARADADCKILV 119
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGGD +++G+ E+ VY + L+ G++ D+ E +S++T+QNAQF+ + + ++L
Sbjct: 120 SGGDARRNGVPEASVYRDALVGVGIDSADVLSEPRSMNTWQNAQFTRVALDGYRADRVLL 179
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+S HL+RS LYF HFG+ A ++YL A +PL+ NF + +LAL EY+GI
Sbjct: 180 VTSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYLGIARYQL 239
>gi|171318455|ref|ZP_02907610.1| protein of unknown function DUF218 [Burkholderia ambifaria MEX-5]
gi|171096369|gb|EDT41271.1| protein of unknown function DUF218 [Burkholderia ambifaria MEX-5]
Length = 224
Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats.
Identities = 73/230 (31%), Positives = 120/230 (52%), Gaps = 12/230 (5%)
Query: 15 LLCQSIRKIFFMSCFMLLFSF-IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+LC+ R+ ++ +L + GW P I + P+ P +I+ LG
Sbjct: 1 MLCRKRRRQIAIAGVVLFWLLATGWLAAPLIAWTEAGVT---PVERPDMHGRTTLII-LG 56
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
GT T +R P ++ RI +T LY++C Q + CT+++SGGDPQ HG E+ V
Sbjct: 57 IGTRRGDT--GLRAPPDGEA--RIRKTAALYRTCLQQATRCTVVMSGGDPQHHGETEAAV 112
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y +L+E GV D+ LE S T++NA+F++S++++ ILV+S+Y ++R+ L F+
Sbjct: 113 YGRRLVEEGVAPGDLVLEPNSRTTYENAKFTASILRSQHDDTRILVASSYQMRRALLDFR 172
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYRG 240
HFGI+ + S+ A +P N AL E +GI + + G
Sbjct: 173 HFGIDPQPVYSNRRRARMGWLPRRDNLENANRALHELVGIAQFHVYRWLG 222
>gi|296158762|ref|ZP_06841591.1| protein of unknown function DUF218 [Burkholderia sp. Ch1-1]
gi|295890967|gb|EFG70756.1| protein of unknown function DUF218 [Burkholderia sp. Ch1-1]
Length = 262
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 7/233 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + + L + L ++ R + + + GW +P LL Q +Q +P
Sbjct: 25 ILFTLLALFFAAIVLWKRARRPLAVCTAALFWLLAAGWLTVP--LLHLAQPRWQTD--TP 80
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
I++LG GT + P +RI + + Y +CK+ + C +I+SG
Sbjct: 81 ARFAPRTAIIMLGGGTVYDDD---HVLVPPRDVLARIMASAQNYAACKRAAAICHVIVSG 137
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G+PQ+H E+ Y LL V R DI LE S T++NA+ S++++ + ++IL++
Sbjct: 138 GNPQRHRATEADTYLPYLLRQQVPRADIVLENSSRTTYENARNVSAVLEGSRYDSLILIT 197
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
SAY + R+ L F FG+ + S+ A+ ++P N E+AL E IGI
Sbjct: 198 SAYQMPRAMLDFHRFGLAPQPMISNARRAHLGVLPRYDNLVSAEIALHELIGI 250
>gi|225849301|ref|YP_002729465.1| hypothetical protein SULAZ_1499 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644421|gb|ACN99471.1| conserved hypothetical protein [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 242
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 23/245 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLF-SFIGWGIIPTILLKHLQFSYQRPLLS 59
+ +I S + RKIF +S F + + LL+ L+ Y P
Sbjct: 13 LPPGLFIVIFSVIAYFGRKDRKIFIVSFLSAFFIYLLSIEPVKDSLLRPLETKYPIP--- 69
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K +G++IV+LG G+ + S R+ L+K ++ II+S
Sbjct: 70 --NKLNGDVIVVLGGGSYNT-------GILTEDSLKRVLTGFVLHK-----KLNLPIILS 115
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG + L E+ V N L E GV++ I + S DT NA F + + K IILV
Sbjct: 116 GGSAITN-LPEAEVMKNILNELGVDKSMIYTDVNSRDTLGNAFFVKKICEKNGFKRIILV 174
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGILI 235
+SAYH+ RS + FQ G++ +D+ YS P + A++EY+G++
Sbjct: 175 TSAYHMPRSVIVFQKAGLDVIPYPTDFKMDKRYTVYSYFPKMNVLQDSTKAIREYVGLIA 234
Query: 236 AYYRG 240
Sbjct: 235 YQLNW 239
>gi|281418736|ref|ZP_06249755.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
gi|281407820|gb|EFB38079.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
Length = 251
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 16/240 (6%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+ S+W + + + I ++ L+ L+ YQ P
Sbjct: 21 LLLAAASFWQYKKKDPKCTKLFVIITAILYLISTPMVCDSLIWSLEKKYQPPSEL----- 75
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+G++I++LG G + S + +R+ ++LY + + IIISGG
Sbjct: 76 NGDVIIMLGGGAFADTPNVNGKGHLSSIAANRLLTCVQLY-----YKLDVPIIISGGQIP 130
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
H +E + N LL GV + I +E +SL+T QNA ++ ++ ILV+SA+H
Sbjct: 131 GHTTSEGEIARNILLSLGVPEEKIIVENRSLNTTQNAFYTKELLDKHGFNKPILVTSAFH 190
Query: 185 LKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYIGILIAYY 238
+KR+ F+ +N +DY + +P + ++KEY+GI+ + +
Sbjct: 191 MKRAVKQFEKNEVNVIPYPTDYQTNSIRKITFMDFVPSAEALQKFYFSVKEYVGIVASRW 250
>gi|295676250|ref|YP_003604774.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1002]
gi|295436093|gb|ADG15263.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1002]
Length = 262
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 7/238 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + + L + L ++ R + + GW P + L QR
Sbjct: 25 ILFTLLALFFAAIVLWKRARRPLVICMIALFWLLAAGWLTAPLLDLA----QPQRQSAEA 80
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
I+LLG GT + P SRI + + Y +CK+ ++ C +I+SG
Sbjct: 81 ATFAPRTAIILLGGGTIYDHD---HVLVPPRDVLSRIEVSAQNYAACKRTAIVCQVIVSG 137
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G+PQ+H E+ Y LL V R DI LE S T++NA+ S ++ +ILV+
Sbjct: 138 GNPQRHSATEADTYLPYLLRQQVPRSDIVLEKSSRTTYENARNVSVIVGQSHYDKLILVT 197
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
SAYH+ R+ L FQ FG+ + S ++P N E+AL E IG+ +
Sbjct: 198 SAYHMPRALLDFQRFGVEPQPQISSARRVRLGVLPRFGNLVAAEIALHELIGLAQFHL 255
>gi|21231145|ref|NP_637062.1| hypothetical protein XCC1692 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768847|ref|YP_243609.1| hypothetical protein XC_2539 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188991962|ref|YP_001903972.1| hypothetical protein xccb100_2567 [Xanthomonas campestris pv.
campestris str. B100]
gi|21112782|gb|AAM40986.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66574179|gb|AAY49589.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167733722|emb|CAP51927.1| Putative membrane protein [Xanthomonas campestris pv. campestris]
Length = 253
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 91/240 (37%), Positives = 134/240 (55%), Gaps = 7/240 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF---FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
M+LS + ++ + L+ + + F + +LL +G G +P+ +L+ LQ +
Sbjct: 1 MMLSLVCVLFGFAWLIDRLGMRRFSRLLGALSLLLVLAVGCGPLPSWMLRDLQRTGANDF 60
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
N IVLLG GT A E + +Y RI E RLY++C C I
Sbjct: 61 TD---WGARNAIVLLGAGTVRSDRAGAP-AEANVFAYGRIVEAARLYRACAATGNDCKIE 116
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
ISGGD + GL+E++VY LL GVE D+ LE S+ T+QNAQFS +++ + + I+
Sbjct: 117 ISGGDARGLGLSEAVVYRRVLLGLGVEAGDLILEPASMTTWQNAQFSQPLLRAYRPQRIV 176
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
LVSSA HL R++LYF HFG+ T SD+L A +S++P S NF L ++AL EY+GI
Sbjct: 177 LVSSATHLHRAELYFLHFGMRTTPVRSDWLRASWSLLPQSYNFTLADVALHEYLGIARYR 236
>gi|312796171|ref|YP_004029093.1| integral membrane protein [Burkholderia rhizoxinica HKI 454]
gi|312167946|emb|CBW74949.1| Integral membrane protein [Burkholderia rhizoxinica HKI 454]
Length = 239
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 71/237 (29%), Positives = 116/237 (48%), Gaps = 6/237 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML++++ L+ + + R++ + G + L L+ P SP
Sbjct: 1 MLVAFVALLWLVAIAVSRRHRRM-TCVAAAFFAYLLCAGWLGEPALHALET--CVPAASP 57
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
IVLLG+GT A R+ P F ++ RI + C+ CT+++SG
Sbjct: 58 PRYGGNVAIVLLGSGTEYDD---AHRLVPKFDAWRRIDAAAAQFILCRAQRAQCTLVVSG 114
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G+PQKH +E+ Y L+ GV +I LE SL+T++NA+ + ++++ I+L++
Sbjct: 115 GNPQKHEHSEAANYQPHLVSHGVPAANIVLEPDSLNTYENARNTGAILRRHHYDQIVLIT 174
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
SAYHL R+ L F HFGI+ S+Y S P A+ T +A E+IG+ Y
Sbjct: 175 SAYHLPRALLDFHHFGIDVVPLASNYRWRRPSWRPHPAHVINTSIAWHEWIGLAQFY 231
>gi|125974798|ref|YP_001038708.1| hypothetical protein Cthe_2313 [Clostridium thermocellum ATCC
27405]
gi|256004933|ref|ZP_05429906.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|125715023|gb|ABN53515.1| protein of unknown function DUF218 [Clostridium thermocellum ATCC
27405]
gi|255991113|gb|EEU01222.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|316941930|gb|ADU75964.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
1313]
Length = 251
Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 16/240 (6%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+ S+W + + + I ++ L+ L+ YQ P
Sbjct: 21 LLLAAASFWQYKKKDPKCTKLFVIITAILYLISTPMVCDSLIWSLEKKYQPPSEL----- 75
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+G++I++LG G + S + +R+ ++LY + + IIISGG
Sbjct: 76 NGDVIIMLGGGAFADTPNVNGKGHLSSIAANRLLTCVQLY-----YKLDVPIIISGGQIP 130
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
H +E + N LL GV + I +E +SL+T QNA ++ ++ ILV+SA+H
Sbjct: 131 GHTTSEGEIAMNILLSLGVPEEKIIVENRSLNTTQNAFYTKELLDKHGFNKPILVTSAFH 190
Query: 185 LKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYIGILIAYY 238
+KR+ F+ +N +DY + +P + ++KEY+GI+ + +
Sbjct: 191 MKRAVKQFEKNEVNVIPYPTDYQTNSIRKITFMDFVPSAEALQKFYFSVKEYVGIVASRW 250
>gi|91782979|ref|YP_558185.1| putative lipoprotein transmembrane [Burkholderia xenovorans LB400]
gi|91686933|gb|ABE30133.1| Putative lipoprotein transmembrane [Burkholderia xenovorans LB400]
Length = 225
Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 6/219 (2%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+L + +R+ + C LF + G + LL Q Q P I++LG
Sbjct: 1 MLWKRVRRPLAV-CTAALFWLLAAGWLTAPLLHLAQPRSQTDA--PARFAPRTAIIMLGG 57
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
GT + P +RI + + Y +CK+ C +I+SGG+PQ+H E+ Y
Sbjct: 58 GTVYDDN---HVLVPPRDVLARITASAQNYAACKRAEATCHVIVSGGNPQRHSATEADTY 114
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
LL V R DI LE S T++NA+ S++++ + ++ILV+SAY + R+ L F
Sbjct: 115 LPYLLRQQVPRADIVLENSSRTTYENARNVSAILEGSRYDSLILVTSAYQMPRAMLDFHR 174
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
FG + S+ A ++P N E+AL E IGI
Sbjct: 175 FGFAPQPMISNARRARLGVLPRYDNLVSAEIALHELIGI 213
>gi|170702081|ref|ZP_02892995.1| protein of unknown function DUF218 [Burkholderia ambifaria
IOP40-10]
gi|170133010|gb|EDT01424.1| protein of unknown function DUF218 [Burkholderia ambifaria
IOP40-10]
Length = 224
Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 71/230 (30%), Positives = 117/230 (50%), Gaps = 12/230 (5%)
Query: 15 LLCQSIRKIFFMSCFMLLFSF-IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+LC+ R+ ++ + + GW P I + P+ P +I LG
Sbjct: 1 MLCRKRRRQIAIAGVAVFWLLATGWLAAPLIAWTEAGVT---PVEHPDMHGRTTLI-TLG 56
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
GT T +R P ++ RI +T LY++C Q + CT+++SGGDPQ HG E+ V
Sbjct: 57 IGTRRGET--GLRAPPDGEA--RIRKTAALYRTCLQQATRCTVVMSGGDPQHHGETEAAV 112
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y +L+ GV D+ LE S T++NA+F++S++++ ILV+S+Y ++R+ L F+
Sbjct: 113 YGRRLVAEGVAPGDLVLEPNSRTTYENAKFTASILRSQHDDTRILVASSYQMRRALLDFR 172
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYRG 240
HFGI+ + S+ A +P N AL E +GI + + G
Sbjct: 173 HFGIDPQPVYSNRRRAQLGWLPRWRNLEDANQALHELVGIAQFHVYRWLG 222
>gi|172060464|ref|YP_001808116.1| hypothetical protein BamMC406_1412 [Burkholderia ambifaria MC40-6]
gi|171992981|gb|ACB63900.1| protein of unknown function DUF218 [Burkholderia ambifaria MC40-6]
Length = 224
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 68/230 (29%), Positives = 113/230 (49%), Gaps = 12/230 (5%)
Query: 15 LLCQSIRKIFFMSCFMLLFSF-IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+LC+ R+ ++ + + GW P I + P+ P +I LG
Sbjct: 1 MLCRKRRRQIAIAGAAVFWLLATGWLAAPLIAWTEAGVT---PVEHPDMHGRTTLI-TLG 56
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
GT ++ +RI T LY++C Q + CT+++SGGDPQ HG E+ V
Sbjct: 57 IGTR----RGETGLQAPPDGEARIRTTAALYRTCVQQATRCTVVMSGGDPQHHGETEAAV 112
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y +L+ GV D+ LE S T++NA+F++S++++ ILV+S+Y ++R+ L F+
Sbjct: 113 YGRRLVAEGVAPGDLVLEPNSRTTYENAKFTASILRSQHDDTRILVASSYQMRRALLDFR 172
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYRG 240
HFGI+ + S+ A +P N AL E +GI + + G
Sbjct: 173 HFGIDPQPVYSNRRRAQLGWLPRRDNLENANRALHELVGIAQFHVYRWLG 222
>gi|15606980|ref|NP_214362.1| hypothetical protein aq_1986 [Aquifex aeolicus VF5]
gi|2984233|gb|AAC07762.1| hypothetical protein aq_1986 [Aquifex aeolicus VF5]
Length = 241
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 68/247 (27%), Positives = 116/247 (46%), Gaps = 26/247 (10%)
Query: 1 MLLSWIFLIVSYW--HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+L I++I + L + F + C + L+ I I +L+ L+ Y++P +
Sbjct: 12 ILPPGIYVIAFLFISFLSKGKFLRRFALLCALSLY-LISVEPIKDLLIYPLENYYKKPEV 70
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
G+ IV+LG G + A S+ R+ LYK K+ II+
Sbjct: 71 L-----KGDAIVVLGGGVYNNGRLKA-------SSFKRLITGFLLYKELKK-----PIIL 113
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNII 177
SGG + + E+ V L GV +DI + +S DTF+NA+F M + ++ K +I
Sbjct: 114 SGG-ASINVIPEAKVMKELLRSFGVPEEDIYTDVRSRDTFENAKFVKEMCEKLLKCKEVI 172
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGI 233
LV+S +H+ R+ F+ G+ +D YS+ P + FY + +A++EYIG+
Sbjct: 173 LVTSGFHMPRAVGVFKKAGLEVIPYPTDLKFEGKYNVYSLFPKYSVFYDSSIAIREYIGL 232
Query: 234 LIAYYRG 240
L +G
Sbjct: 233 LFYKLKG 239
>gi|119512087|ref|ZP_01631180.1| hypothetical protein N9414_07364 [Nodularia spumigena CCY9414]
gi|119463245|gb|EAW44189.1| hypothetical protein N9414_07364 [Nodularia spumigena CCY9414]
Length = 263
Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats.
Identities = 70/251 (27%), Positives = 109/251 (43%), Gaps = 26/251 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
I LIV+ L + +S + L + L++ L++ Y P P +
Sbjct: 21 ISLIVALVTLWKRPRIAAIAISLALTLLLVCSNAWVAKSLVRSLEWQYLPPNPVP----N 76
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG--DP 123
IV+LG T P ++ R+ +LY+ K II+SGG D
Sbjct: 77 AEAIVVLGGATKSA--YPPRPTVDLSETGDRVIYAAQLYRQNK----APIIILSGGRIDW 130
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ G +ES N L G+ + I E SL+T+QNA ++++ ++LV+SA
Sbjct: 131 RGGGESESADMANVLTSIGIPSEVIVQEPDSLNTYQNAVNVKKILESRGIGKVLLVTSAM 190
Query: 184 HLKRSQLYFQHFGINTKASCSDYL--------------NAYYSIIPLSANFYLTELALKE 229
H+ RS FQ GIN A+ +D+L A +++P S N ALKE
Sbjct: 191 HMPRSIQIFQRQGINAIAAPTDFLVSQGELQELSSTPKAAILNLLPDSNNLQQFTSALKE 250
Query: 230 YIGILIAYYRG 240
YIG + +RG
Sbjct: 251 YIGSFVYSWRG 261
>gi|320161712|ref|YP_004174937.1| hypothetical protein ANT_23110 [Anaerolinea thermophila UNI-1]
gi|319995566|dbj|BAJ64337.1| hypothetical protein ANT_23110 [Anaerolinea thermophila UNI-1]
Length = 264
Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 31/257 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIF-FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ + L +S + R +F ++ F+LL S W + T L + L++ Y L +
Sbjct: 18 MALVLLALSLFKWKNIRWRNLFTGLALFILLVSSNRW--VATTLARSLEWQY----LPNE 71
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+V+LG GT P P + R+ LY+ K +I+SGG
Sbjct: 72 PISSAPAMVVLGGGTE--PAFPPRSQPEVNSAGDRVLYAAALYQQGK----APLVIVSGG 125
Query: 122 DPQKHGL---AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+ G + + L GV + I E QS +T++NA + + ++K + +IL
Sbjct: 126 NVAFRGEQSSTPASDMRHLLKMLGVPPEAILEEDQSQNTYENALYCAKLLKERHIQRVIL 185
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI---------------IPLSANFYLT 223
V+SA H+ RS F+ GI + +D+ + +P S+N LT
Sbjct: 186 VTSALHMPRSVKLFEKQGIEVIPAPADFAVPFQEWEDLLHAPIPAQLVALLPSSSNLQLT 245
Query: 224 ELALKEYIGILIAYYRG 240
L EYIGIL+ + RG
Sbjct: 246 TNVLHEYIGILVYWMRG 262
>gi|115351425|ref|YP_773264.1| hypothetical protein Bamb_1372 [Burkholderia ambifaria AMMD]
gi|115281413|gb|ABI86930.1| protein of unknown function DUF218 [Burkholderia ambifaria AMMD]
Length = 224
Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats.
Identities = 68/230 (29%), Positives = 113/230 (49%), Gaps = 12/230 (5%)
Query: 15 LLCQSIRKIFFMSCFMLLFSF-IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+LC+ R+ ++ + + GW P I + P+ P +I LG
Sbjct: 1 MLCRKRRRQIAIAGAAVFWLLATGWLAAPLIAWTEAGVT---PVEHPAMHGRTTLI-TLG 56
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
GT ++ +RI T LY++C Q + CT+++SGGDPQ HG E+ V
Sbjct: 57 IGTR----RGETGLQAPPDGEARIRTTAALYRTCVQQATRCTVVMSGGDPQHHGETEAAV 112
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y +L+ GV D+ LE S T++NA+F++S++++ ILV+S+Y ++R+ L F+
Sbjct: 113 YGRRLVAEGVAPGDLVLEPNSRTTYENAKFTASILRSQHDDTRILVASSYQMRRALLDFR 172
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYRG 240
HFGI+ + S+ A +P N AL E +GI + + G
Sbjct: 173 HFGIDPQPVYSNRRRAQLGWLPRRDNLENANRALHELVGIAQFHVYRWLG 222
>gi|206889829|ref|YP_002248307.1| hypothetical protein THEYE_A0462 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741767|gb|ACI20824.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 235
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 22/224 (9%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + LL I + +LL L+ SY S K D + IV+LG G
Sbjct: 30 KRRNFIRYLAFFSALLVYLISIEPVKDLLLYPLEKSY-----SVSEKLDADAIVILGGGV 84
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ P S +R+F +Y+ K II+SGG + +++S
Sbjct: 85 YSWASFPE-------DSSNRLFTGYLVYRKTK-----LPIIVSGGAVEG-KISDSAAMAA 131
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L E GVE I E +S DT QNA + + + K K +ILV+SAYH+KR+ +F+ G
Sbjct: 132 MLKEFGVEDSKIIEENKSRDTAQNALYVAKICKEKSFKKVILVTSAYHMKRAVKFFKQAG 191
Query: 197 INTKASCSDYLNAY----YSIIPLSANFYLTELALKEYIGILIA 236
+ +D+ + YS +P NF L+ A++E+I +++
Sbjct: 192 LEVLPYPADFKQSNHYNIYSFLPKFGNFALSSKAIREHIALIVY 235
>gi|83717478|ref|YP_438905.1| hypothetical protein BTH_II0706 [Burkholderia thailandensis E264]
gi|167577281|ref|ZP_02370155.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis TXDOH]
gi|167615420|ref|ZP_02384055.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis Bt4]
gi|257141992|ref|ZP_05590254.1| hypothetical protein BthaA_22676 [Burkholderia thailandensis E264]
gi|83651303|gb|ABC35367.1| Uncharacterized ACR, COG1434 family [Burkholderia thailandensis
E264]
Length = 255
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 80/240 (33%), Positives = 129/240 (53%), Gaps = 8/240 (3%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSP 60
LL+ I + + L + + F IG G +P LL+ LQ Y RP ++
Sbjct: 5 LLTAIVFVAALLRLAKRRRASLALFVASAAAFFAIGCGPVPAWLLRELQAPYAARPAIA- 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH--SMHCTIII 118
+ N IV+LG T I A+ P SYSR+ E LY+ C++ + C I++
Sbjct: 64 --WGERNAIVMLGLATEKIAATGAVE--PGTFSYSRVVEAASLYRDCRRARANAGCKILV 119
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGGD +++G E+ +Y + L+ GV+ D+ E +S++T+QNAQF+ +++ + ++L
Sbjct: 120 SGGDARRNGAPEASIYRDALIGLGVDAADVLSEPRSMNTWQNAQFTRAVLDGYRADRVLL 179
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+S HL+RS LYF HFG+ ++YL A +PL+ NF + +LAL E +GI
Sbjct: 180 VTSGVHLRRSALYFAHFGVAAIPVRAEYLQAVTFPLPLAYNFSVADLALHECLGIARYRL 239
>gi|269963112|ref|ZP_06177447.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832076|gb|EEZ86200.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 268
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
CF++LFSF+G + + T LL L+ Y+ L + +++LG G +
Sbjct: 38 GCFVVLFSFVGIFLVAFQPVSTKLLMPLEREYKAFLPVS---GTVDYVMVLGAGHVVDDE 94
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
IP + S + R+ E +R+ + +I+SG ++ + + N L
Sbjct: 95 IPPTS-QLSRTALMRLTEGIRILRMY----PGAKLILSGYAGGSE-ISHARMMANVALSL 148
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + DI L + DT++ A+ +++ +K K+I+LV+SA H+KR+ F GI
Sbjct: 149 GVAKSDIILLEDAKDTWEEARQAAAFVKQ---KDIVLVTSASHMKRALYEFNAAGIKPIP 205
Query: 202 SCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ ++++ + P + TEL EY+G L R N
Sbjct: 206 APTNFMAIDDIEQPWQKYAPKARYLEQTELYWHEYLGGLWQKLRDN 251
>gi|167836831|ref|ZP_02463714.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis MSMB43]
Length = 240
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 73/246 (29%), Positives = 119/246 (48%), Gaps = 14/246 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI---GWGIIPTILLKHLQFSYQRPL 57
M+L F ++ LLC+ R F + ++ GW P + L RP+
Sbjct: 1 MILFNSFGLLFVVFLLCRKRRAAFAILAAGAALLWLIASGWLAAPLVALAEAGV---RPV 57
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P D IV+LG G P + +RI +T LY +C++ + CT++
Sbjct: 58 AHPAMTGDTT-IVMLGAGIRRRDGA----AVPPRDALARIDKTAELYSACQRTAKRCTVV 112
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGGDPQ G+ E+ Y LL GV D+ E S T++NA+F+ +++ ++I
Sbjct: 113 VSGGDPQMRGITEADTYAPYLLARGVAHADLIRERSSHTTYENARFTVPILRAQHYDDLI 172
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL--- 234
LV+S+Y +KR+ L F+ FGI + ++ +A +P +AN ELAL E +G+
Sbjct: 173 LVTSSYQMKRALLDFERFGIVPQPVYANRRDAQLGWLPRAANLVNAELALHEIVGVAQFH 232
Query: 235 IAYYRG 240
+ G
Sbjct: 233 VYRRLG 238
>gi|186476497|ref|YP_001857967.1| hypothetical protein Bphy_1739 [Burkholderia phymatum STM815]
gi|184192956|gb|ACC70921.1| protein of unknown function DUF218 [Burkholderia phymatum STM815]
Length = 228
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 113/220 (51%), Gaps = 5/220 (2%)
Query: 15 LLCQSIRKIFFMSCFMLLFS-FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+L ++ R + + +L ++ GW P + L ++P IVLLG
Sbjct: 1 MLLRNARTLIGTTTIVLFWAVGAGWLAQPLLDLAQRGAPPGGQTVAPATYAAHTAIVLLG 60
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
GT ++ P + +RI + LY CKQ S C +I+SGG+PQ+H E+
Sbjct: 61 TGTVHRDG----KLVPPRDAIARIAMSADLYARCKQVSSVCHVIVSGGNPQEHEATEADT 116
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
Y LL V R DI LE +S+ T++NA+ ++++ + +++LV+SAY + R+ L F
Sbjct: 117 YLPYLLREEVPRGDIILENRSMTTYENARNVAAILPDGYYGSLMLVTSAYQMPRALLNFH 176
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
FG+N S+ +A ++P NF+ E+AL E +GI
Sbjct: 177 RFGMNPLPVVSNTRHAKRGVLPRRENFFDAEIALHELVGI 216
>gi|254423832|ref|ZP_05037550.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196191321|gb|EDX86285.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 263
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 63/244 (25%), Positives = 98/244 (40%), Gaps = 27/244 (11%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L R ++ + + F I+ LL L++ Y P P + IV+LG
Sbjct: 28 WLWRHPRRASGAIALALFILFFSSNPIVSNKLLSSLEWRYFPPDPVPT----ADAIVVLG 83
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG---LAE 130
T +P I ++ RI RLY + +I+SGG Q G +E
Sbjct: 84 GAT--VPAIAPRPWVEVSEAGDRILYAARLYNQGR----APKLILSGGRVQWRGGSDESE 137
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ + V DI LE SL+T QNA ++ +++LV+SA H+ RS
Sbjct: 138 ADDMKAFAMAMNVPEADIILEETSLNTRQNAVNVKKILAAQSIDSVLLVTSAVHMPRSVA 197
Query: 191 YFQHFGINTKASCSDYL--------------NAYYSIIPLSANFYLTELALKEYIGILIA 236
FQ I+ + +DYL S++P + A+KEY+G +I
Sbjct: 198 IFQKLDIDVIPAPTDYLVTTPSDESGEITIEGRILSLLPRAEATGRFTRAMKEYVGFVIY 257
Query: 237 YYRG 240
RG
Sbjct: 258 RLRG 261
>gi|153832463|ref|ZP_01985130.1| integral membrane protein [Vibrio harveyi HY01]
gi|148871258|gb|EDL70130.1| integral membrane protein [Vibrio harveyi HY01]
Length = 268
Score = 178 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 23/226 (10%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
CF++LFSF+G + + T LL L+ Y+ L + +++LGNG +
Sbjct: 38 GCFVVLFSFVGIFLVAFQPVSTKLLMPLEREYKAFLPVS---GTVDYVMVLGNGHVVDNE 94
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
IP + S + R+ E +R+ + +I+SG ++ + + N L
Sbjct: 95 IPPTS-QLSRTALMRLTEGIRILRMY----PGAKLILSGYAGGSE-ISHARMMANVALSL 148
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + DI L + DT++ A+ +++ +K K+I+LV+SA H+KR+ F GI
Sbjct: 149 GVAKSDIILLEDAKDTWEEARQAAAFVKQ---KDIVLVTSASHMKRALYEFNAAGIKPIP 205
Query: 202 SCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ ++++ + P + TEL EY+G L R N
Sbjct: 206 APTNFMAIDDIEQPWQKYAPKARYLEQTELYWHEYLGGLWQKLRDN 251
>gi|257058358|ref|YP_003136246.1| hypothetical protein Cyan8802_0454 [Cyanothece sp. PCC 8802]
gi|256588524|gb|ACU99410.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8802]
Length = 265
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 26/242 (10%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ F ++ +++ + + L++ L+ P++ PQ +IV+LG
Sbjct: 32 FWKRPNWTPFPVAFALVILLISSNAWVSSALIQSLEQQISPPVIIPQ----AEVIVVLG- 86
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG--DPQKHGLAESI 132
G T P P ++ + + R+F +LY K II SGG + ES
Sbjct: 87 GATKSPVKPRPMVDVN-EHGDRLFYAAKLYLDQK----APLIIASGGRISWSGNSRPESE 141
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
L GV I E SL+T++NA ++ N+ K ++LV+SA+HL R++L F
Sbjct: 142 DMAQLLQMLGVPSQAIIQEPNSLNTYENAINVKQILDNLGIKKVLLVTSAFHLPRARLIF 201
Query: 193 QHFGINTKASCSDYLNA--------------YYSIIPLSANFYLTELALKEYIGILIAYY 238
+ GIN + +DY ++P + LT LALKEYIG I
Sbjct: 202 EKLGINVIGAPTDYFVTEIDETNNQTSIEGFILGLLPDAHRLSLTTLALKEYIGTFIYRL 261
Query: 239 RG 240
+G
Sbjct: 262 KG 263
>gi|50121475|ref|YP_050642.1| hypothetical protein ECA2551 [Pectobacterium atrosepticum SCRI1043]
gi|49612001|emb|CAG75450.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
Length = 282
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 16/234 (6%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K + +++L + + LL L+ Y + Q K + IV+L
Sbjct: 31 WFTRRQRTGKTMVLGSWLML-ILLSLQPVADRLLLPLESQYPTWQQTSQASK-ADYIVVL 88
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T S S R+ E +RLY + + +I +GG Q + ++ +
Sbjct: 89 GGGYTYNAEWAPSSNLIS-NSLPRVTEGIRLYHA----NPGAKLIFTGGAAQGNPVSSAK 143
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
G+ R DI + DT + A ++ ++ + +LV+SA HL R+ +F
Sbjct: 144 TAALVAESLGIPRQDIVILDTPRDTEEEAAATAKIV---GDRPFLLVTSANHLPRAIRFF 200
Query: 193 QHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
Q G+ + ++ LN + + P + +E A E +G L +G
Sbjct: 201 QAQGLAPIPAPANQMAITSALNPWEKVFPSAYYLSHSERAWYETLGRLWQLLKG 254
>gi|227329837|ref|ZP_03833861.1| hypothetical protein PcarcW_21865 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 282
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 96/234 (41%), Gaps = 16/234 (6%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K ++ +++L + + LL L+ Y +PQ K IV+L
Sbjct: 31 WFTQRQRTGKTIMLASWLML-ILLSLQPVADRLLLPLESHYPTWRQTPQASK-AEYIVVL 88
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T S S R+ E +RLY + + +I +GG Q + ++ +
Sbjct: 89 GGGYTYNAEWAPSSNLIS-NSLPRVTEGVRLYHA----NPGAKLIFTGGAAQGNPVSSAK 143
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
G+ + DI + DT + A ++ ++ + +LV+SA HL R+ +F
Sbjct: 144 TAALVAESLGIPQQDIVILDTPRDTEEEAAATAKIVGE---RPFLLVTSANHLPRAMRFF 200
Query: 193 QHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
Q G+ + ++ LN + + P + +E A E +G L +G
Sbjct: 201 QAQGLAPIPAPANQMAITSALNPWEKVFPSAYYLSHSERAWYETLGRLWQALKG 254
>gi|229141535|ref|ZP_04270069.1| hypothetical protein bcere0013_46290 [Bacillus cereus BDRD-ST26]
gi|228641935|gb|EEK98232.1| hypothetical protein bcere0013_46290 [Bacillus cereus BDRD-ST26]
Length = 277
Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 103/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L +FL +S + IF + ++ FI + L + + + RP
Sbjct: 40 ILFCILFLFISPASFFSSHFQPIFAGISLITVYFFIH---LSNFLSAYFLYQFNRP---- 92
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 93 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQATVNTPPTIIFSG 142
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 143 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPDGKYKSI 202
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 203 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIIVMG 251
Query: 238 YR 239
+
Sbjct: 252 RK 253
>gi|186681117|ref|YP_001864313.1| hypothetical protein Npun_F0616 [Nostoc punctiforme PCC 73102]
gi|186463569|gb|ACC79370.1| protein of unknown function DUF218 [Nostoc punctiforme PCC 73102]
Length = 263
Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats.
Identities = 67/254 (26%), Positives = 108/254 (42%), Gaps = 26/254 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + L+V+ L + ++ + L F I L++ L++ P
Sbjct: 18 LACVSLVVALVTLWKRPRTAAIAIAFALTLLLFCSNAWIAKSLVRSLEWQNLPLAQIPV- 76
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
IV+LG T P +S R+ +LY+ + II+SGG
Sbjct: 77 ---AEAIVVLGGATKSA--FPPRPTVDLSESGDRVIYAAQLYRQKR----APIIILSGGR 127
Query: 122 -DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D + G ES L G+ + I E +SL+T+QNA ++++ ++LV+
Sbjct: 128 IDWRGGGSPESADMATILTSIGIPSEAIVQEPESLNTYQNAVNVRKILESRGINQVLLVT 187
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL--------------NAYYSIIPLSANFYLTELA 226
SA H+ RS FQ GIN + +D+L A +++P + N + A
Sbjct: 188 SAMHMPRSLNIFQRQGINVIPAPTDFLVSQGELQELGGTPKAAILNLLPDTDNLHQFTSA 247
Query: 227 LKEYIGILIAYYRG 240
LKEYIG LI RG
Sbjct: 248 LKEYIGSLIYRLRG 261
>gi|261821327|ref|YP_003259433.1| hypothetical protein Pecwa_2047 [Pectobacterium wasabiae WPP163]
gi|261605340|gb|ACX87826.1| protein of unknown function DUF218 [Pectobacterium wasabiae WPP163]
Length = 282
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 96/234 (41%), Gaps = 16/234 (6%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K ++ +++L + + LL L+ Y +PQ + IV+L
Sbjct: 31 WFTQRQRTGKTMILASWLML-ILLSLQPVADRLLLPLESQYPTWRQTPQ-ADNAEYIVVL 88
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T S S R+ E +RLY + + +I +GG Q + ++ +
Sbjct: 89 GGGYTYNAEWAPSSNLIS-NSLPRVTEGVRLYHA----NPGAKLIFTGGAAQGNPVSSAK 143
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
G+ + DI + DT + A ++ ++ + +LV+SA HL R+ +F
Sbjct: 144 TAALVAESLGIPQQDIVILDTPRDTEEEAAATAKIV---GARPFLLVTSANHLPRAIRFF 200
Query: 193 QHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
Q G+ + ++ LN + + P + +E A E +G L +G
Sbjct: 201 QAQGLAPIPAPANQMAITSALNPWEKVFPSAYYLSHSERAWYETLGRLWQSLKG 254
>gi|227111948|ref|ZP_03825604.1| hypothetical protein PcarbP_03233 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 282
Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 96/234 (41%), Gaps = 16/234 (6%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K ++ +++L + + LL L+ Y +PQ K IV+L
Sbjct: 31 WFTQRQRTGKAIILASWLML-ILLSLQPVADRLLLPLESHYPTWRQTPQASK-AEYIVVL 88
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T S S R+ E +RLY + + +I +GG Q + ++ +
Sbjct: 89 GGGYTYNAEWAPSSNLIS-NSLPRVTEGVRLYHA----NPGAKLIFTGGAAQGNPVSSAK 143
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
G+ + DI + DT + A ++ ++ + +LV+SA HL R+ +F
Sbjct: 144 TAALVAESLGIPQQDIIILDTPRDTEEEAAATAKIVGE---RPFLLVTSANHLPRAMRFF 200
Query: 193 QHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
Q G+ + ++ LN + + P + +E A E +G L +G
Sbjct: 201 QAQGLAPIPAPANQMAITSALNPWEKVFPSAYYLSHSERAWYETLGRLWQALKG 254
>gi|310643123|ref|YP_003947881.1| protein of hypothetical function duf218 [Paenibacillus polymyxa
SC2]
gi|309248073|gb|ADO57640.1| Protein of hypothetical function DUF218 [Paenibacillus polymyxa
SC2]
Length = 249
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 1 MLLSWIFLIV---SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
+L +F++V L ++ + + LL + +L++ L+ Y +PL
Sbjct: 12 VLPPGLFILVMAGLVIWLWKRARKPAIVLLLVTLLLYISSTNLAGDVLIRSLEKQYPQPL 71
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
GN+IV+LG G T + + +R+ RL+++ I+
Sbjct: 72 -----TVQGNVIVVLGGGATEGTPDINGQGNLLGSAANRLLTAARLHEA-----TGLPIL 121
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
SGG E+ + +LL G+ DI +E +SL+T QNA ++S ++K Q I
Sbjct: 122 FSGGQVFGDSGNEANIAQRQLLGLGIPAKDIFIENRSLNTQQNAVYTSKILKQHQLTKPI 181
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYI 231
LV+SA+H+ R+ L FQ G+ T A +DYL + + P + T ALKEY+
Sbjct: 182 LVTSAFHMPRAALEFQRAGMQTTAYPTDYLASEKLSLYAAKLSPSAGAISTTGTALKEYL 241
Query: 232 GILIAYYR 239
GIL +
Sbjct: 242 GILALKLK 249
>gi|325295248|ref|YP_004281762.1| hypothetical protein Dester_1066 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065696|gb|ADY73703.1| protein of unknown function DUF218 [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 272
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 15/240 (6%)
Query: 3 LSWIFLIVSYWHLL-CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ +F+++ LL + I +S +L + + +L L+ ++ P +
Sbjct: 17 VFVVFILIGIVFLLINKRKIGIAILSLTAVLIYLLSIEPVKNRILLPLENAFPYP---SE 73
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ D IV+LG G ++ Q R++ +++K K+ I++SGG
Sbjct: 74 AELDCKAIVVLGGGEIFHSPAEGMKAAVKPQVAKRLYTAFKIWKKVKK-----PIVVSGG 128
Query: 122 DPQKHGL-AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ AES L+ G+ +I E++S +TFQN F+ ++ K I LV+
Sbjct: 129 KVFNENVEAESSAMKRFLISLGIPNKEIIEESKSKNTFQNGIFTYKILNKKGIKKICLVT 188
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILI 235
SAYH+ RS F+ G + +DY ++ S P + Y + L + EY+GI
Sbjct: 189 SAYHMPRSYRIFKSIGFSVIPVPADYRVNRGSYSWSSYFPRMEDLYDSFLGIHEYVGIAY 248
>gi|218245322|ref|YP_002370693.1| hypothetical protein PCC8801_0441 [Cyanothece sp. PCC 8801]
gi|218165800|gb|ACK64537.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8801]
Length = 265
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 26/242 (10%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ F ++ +++ + + L++ L+ P++ PQ +IV+LG
Sbjct: 32 FWKRPNWTPFPVAFALVILLISSNAWVSSALIQSLEQQISPPVIIPQ----AEVIVVLG- 86
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG--DPQKHGLAESI 132
G T P P ++ + + R+F +LY K II SGG + ES
Sbjct: 87 GATKSPVKPRPMVDVN-EHGDRLFYAAKLYLDQK----APLIIASGGRISWSGNSRPESE 141
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
L GV I E SL+T++NA ++ N+ K ++LV+SA+HL R++L F
Sbjct: 142 DMAQLLQMLGVPSQAIIQEPNSLNTYENAINVKQILDNLGIKKVLLVTSAFHLPRARLIF 201
Query: 193 QHFGINTKASCSDYLNA--------------YYSIIPLSANFYLTELALKEYIGILIAYY 238
+ GIN + +DY ++P + LT LALKEYIG I
Sbjct: 202 EKLGINVIGTPTDYFVTEIDETNNQTSIEGFILGLLPDAHRLSLTTLALKEYIGTFIYRL 261
Query: 239 RG 240
+G
Sbjct: 262 KG 263
>gi|187923614|ref|YP_001895256.1| hypothetical protein Bphyt_1622 [Burkholderia phytofirmans PsJN]
gi|187714808|gb|ACD16032.1| protein of unknown function DUF218 [Burkholderia phytofirmans PsJN]
Length = 262
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 70/232 (30%), Positives = 113/232 (48%), Gaps = 10/232 (4%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL+ F + W + + IF ++ F LL + GW P + L + +P
Sbjct: 29 LLALFFAAIVLWKGARRPLA-IFTVAFFWLLAA--GWLTAPLLRLAQPHWR----TEAPA 81
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
I++LG GT + P +RI + Y +CK+ + C +I+SGG
Sbjct: 82 TFAPRTAIIMLGGGTIYGA---GQVLMPPRDVLARIAASAEYYAACKRAADICHVIVSGG 138
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+PQ+H E+ Y LL V R DI LE +SL T++NA+ S ++ + ++IL++S
Sbjct: 139 NPQRHRATEADTYLPYLLRRQVPRADIVLENRSLTTYENARNVSGIVHGSRYDSLILITS 198
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
AY + R+ L F FG+ + S+ + A ++P N E+AL E IGI
Sbjct: 199 AYQMPRALLDFHRFGLTPQPMISNAIGARLGVLPRYDNLASAEIALHELIGI 250
>gi|206969698|ref|ZP_03230652.1| conserved domain protein [Bacillus cereus AH1134]
gi|206735386|gb|EDZ52554.1| conserved domain protein [Bacillus cereus AH1134]
Length = 277
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 53/242 (21%), Positives = 107/242 (44%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L S +FL +S ++ IF + ++ FI + L + + + RP
Sbjct: 40 ILFSILFLFISPASFFSSHLQPIFGGISLITIYFFIH---LSNFLSAYFLYQFNRP---- 92
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 93 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 142
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 143 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 202
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 203 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 251
Query: 238 YR 239
+
Sbjct: 252 RK 253
>gi|229181123|ref|ZP_04308455.1| hypothetical protein bcere0005_44660 [Bacillus cereus 172560W]
gi|228602314|gb|EEK59803.1| hypothetical protein bcere0005_44660 [Bacillus cereus 172560W]
Length = 280
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 53/242 (21%), Positives = 107/242 (44%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L S +FL +S ++ IF + ++ FI + L + + + RP
Sbjct: 43 ILFSILFLFISPASFFSSHLQPIFGGISLITIYFFIH---LSNFLSAYFLYQFNRP---- 95
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 96 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 145
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 146 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 205
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 206 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 254
Query: 238 YR 239
+
Sbjct: 255 RK 256
>gi|253688162|ref|YP_003017352.1| hypothetical protein PC1_1775 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754740|gb|ACT12816.1| protein of unknown function DUF218 [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 282
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 96/234 (41%), Gaps = 16/234 (6%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q + ++ ++ L + + LL L+ Y +PQ K + IV+L
Sbjct: 31 WFTQRQRTGRTIILASWLAL-ILLSLQPVADRLLLPLESHYPTWRQAPQANK-VDYIVVL 88
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T S S R+ E +RLY + + +I +GG Q + ++ +
Sbjct: 89 GGGYTYNAEWAPSSNLIS-NSLPRVTEGIRLYHA----NPGAKLIFTGGAAQGNPVSSAK 143
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
G+ + DI + DT + A ++ ++ + +LV+SA HL R+ +F
Sbjct: 144 TAALVAESLGIPQQDIVILDTPRDTEEEAAATAKIV---GDRPFLLVTSANHLPRAIRFF 200
Query: 193 QHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
Q G+ + ++ LN + + P + +E A E +G L +G
Sbjct: 201 QAQGLAPIPAPANQMAITSALNPWEKVFPSAYYLSHSERAWYETLGRLWQALKG 254
>gi|308070011|ref|YP_003871616.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
gi|305859290|gb|ADM71078.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
Length = 249
Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 19/248 (7%)
Query: 1 MLLSWIFLIV---SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
+L +F++V L ++ + LL + +L+ L+ Y +P
Sbjct: 12 VLPPGLFILVMTGLVIWLWKRARIPAVVLLLVTLLLYVSSTNLAGDLLISSLEKQYPQP- 70
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
G++IV+LG G T + + +R+ RL+++ I+
Sbjct: 71 ----RTVQGDVIVVLGGGATQGTPDINGQGNLLGSAANRLLTAARLHEA-----TGLPIL 121
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
SGG E+ + +LL G+ DI +E +SL+T QNA ++S +++ Q +
Sbjct: 122 FSGGQVFGDSGNEANIAQRQLLGLGIPAKDILIENRSLNTQQNAVYTSQILEKHQLTRPV 181
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYI 231
LV+SA+H+ R+ L FQ G+ A +DYL + + P + T ALKEY+
Sbjct: 182 LVTSAFHMPRAALEFQRAGVQAIAYPTDYLASEKLSLYAGKLSPSAGAMSTTGTALKEYL 241
Query: 232 GILIAYYR 239
GIL +
Sbjct: 242 GILALKLK 249
>gi|206978334|ref|ZP_03239209.1| conserved domain protein [Bacillus cereus H3081.97]
gi|217962290|ref|YP_002340860.1| hypothetical protein BCAH187_A4938 [Bacillus cereus AH187]
gi|222098272|ref|YP_002532329.1| hypothetical protein BCQ_4614 [Bacillus cereus Q1]
gi|206743465|gb|EDZ54897.1| conserved domain protein [Bacillus cereus H3081.97]
gi|217064139|gb|ACJ78389.1| conserved domain protein [Bacillus cereus AH187]
gi|221242330|gb|ACM15040.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 344
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 103/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L +FL +S + IF + ++ FI + L + + + RP
Sbjct: 107 ILFCILFLFISPASFFSSHFQPIFAGISLITVYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQATVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 210 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPDGKYKSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIIVMG 318
Query: 238 YR 239
+
Sbjct: 319 RK 320
>gi|156973875|ref|YP_001444782.1| hypothetical protein VIBHAR_01585 [Vibrio harveyi ATCC BAA-1116]
gi|156525469|gb|ABU70555.1| hypothetical protein VIBHAR_01585 [Vibrio harveyi ATCC BAA-1116]
Length = 268
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 23/226 (10%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
CF++LFSF+G + + T LL L+ Y+ L + +++LGNG +
Sbjct: 38 GCFVVLFSFVGIFLVAFQPVSTKLLMPLEREYKAFLPVS---GTVDYVMVLGNGHVVDNE 94
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
IP + S + R+ E +R+ + +I+SG ++ + + N L
Sbjct: 95 IPPTS-QLSRTALMRLTEGIRILRMY----PGAKLILSGYAGGSE-ISHARMMANVALSL 148
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + DI L + DT++ A+ +++ +K K+I+LV+SA H+KR+ F GI
Sbjct: 149 GVAKSDIILLEDAKDTWEEARQAAAFVKQ---KDIVLVTSASHMKRALYEFNAAGIKPIP 205
Query: 202 SCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ ++++ + P + TEL EY+G L R N
Sbjct: 206 APTNFMAIDDIEQPWQKYAPKARYLEQTELYWYEYLGGLWQKLRDN 251
>gi|149191740|ref|ZP_01869980.1| hypothetical protein VSAK1_04082 [Vibrio shilonii AK1]
gi|148834429|gb|EDL51426.1| hypothetical protein VSAK1_04082 [Vibrio shilonii AK1]
Length = 297
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 55/245 (22%), Positives = 105/245 (42%), Gaps = 19/245 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML+ +V + + + + F I + + + LL L+ Y L
Sbjct: 18 MLILGFLGLVLIMFTARRKLGSLIILVSLCGTF-LISFQPLSSRLLMPLERQYSAFL--- 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +++LG G + IP E S S R+ E +R+ + +I+SG
Sbjct: 74 PINETIDYVMVLGGGHVVDDQIPPTS-ELSRASLMRLSEGIRILRMY----PGAKLILSG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++ + L G+ + DI L + DT++ A+ ++ ++N K ++LV+
Sbjct: 129 YDG-GTGVSHARTMAKVALALGIAKPDIILLETAKDTWEEARQAAGFVQN---KKLVLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGIL 234
SA H+KR+ F+ G+N + +++L A+ P S TE E +G++
Sbjct: 185 SASHMKRAMHEFEAAGLNPLPAPTNFLAQKDIEQAWQKYTPSSRYLEQTERYWHETMGLI 244
Query: 235 IAYYR 239
R
Sbjct: 245 WQNLR 249
>gi|262404134|ref|ZP_06080689.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC586]
gi|262349166|gb|EEY98304.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC586]
Length = 283
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 60/244 (24%), Positives = 109/244 (44%), Gaps = 23/244 (9%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFS-----FIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LI+ + L+ C ++LFS FI + I T LL L+ +Y L
Sbjct: 18 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGIFFISFQPIATRLLMPLERTYTAFL---P 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +++LGNG + IP E S + R+ E +R+ + M I+SG
Sbjct: 75 VEGTVDYVMVLGNGHVVDDDIPPTS-ELSRAALMRLAEGIRINRMYPGSKM----ILSGY 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ + + L GV + DI L + DT++ A+ +++ ++ K ++LV+S
Sbjct: 130 AGGSE-VSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQ---KRMVLVTS 185
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+N + +++L + IP + TE E +G+L
Sbjct: 186 ASHMKRAMREFEAAGLNPIPAPTNFLGHLNIAQPWDKYIPKARYLEQTEQYWYETLGLLW 245
Query: 236 AYYR 239
R
Sbjct: 246 QKLR 249
>gi|229087343|ref|ZP_04219484.1| hypothetical protein bcere0022_39130 [Bacillus cereus Rock3-44]
gi|228695980|gb|EEL48824.1| hypothetical protein bcere0022_39130 [Bacillus cereus Rock3-44]
Length = 347
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 29/237 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLL+ I L+V + IF ++++ F I T L + + + RP
Sbjct: 112 MLLAMISLVVDPTRFFSPHFQPIFAGVSLIMIYFFFH---ISTFLTAYFLYQFNRP---- 164
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 165 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVTTPPTIIFSG 214
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILV 179
G L E+ +E G+ + E +S++T+QN FS ++ +++ K I
Sbjct: 215 GQGPDEKLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMLFSKKIMDSLKDKYRSIFT 274
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++ +HL R+ LY + G+N++ S +A +Y ++EYI I++
Sbjct: 275 TNNFHLFRAGLYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYIAIVVM 320
>gi|22299705|ref|NP_682952.1| hypothetical protein tlr2162 [Thermosynechococcus elongatus BP-1]
gi|22295889|dbj|BAC09714.1| tlr2162 [Thermosynechococcus elongatus BP-1]
Length = 263
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 67/253 (26%), Positives = 109/253 (43%), Gaps = 29/253 (11%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+ +F IV +W Q + + + G + L+ L+ Y P P+
Sbjct: 22 ALVFAIVRFWRAPKQ---AAIALVIALTILLLSGNDYVAATLIASLERQYLPPHPMPK-- 76
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
IV+LG ++P + RI L++ +I+SGG
Sbjct: 77 --AAAIVVLGG--AVVPQTAPRPWVEVTEGGDRILYGAHLFRQ----GSDPYLILSGGRI 128
Query: 124 QKHGL----AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIIL 178
G AE++ GV RD I LET SL+T+QNA ++++ Q + ++L
Sbjct: 129 NWLGETFQQAEAVDMAEIATTCGVPRDKILLETSSLNTYQNAVNVKALLEKHQMQGKLLL 188
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYL-----------NAYYSIIPLSANFYLTELAL 227
V+SAYH+ R+ F+ G++ + +DY N S+IP N +T +AL
Sbjct: 189 VTSAYHMPRAVAIFRRLGMDVIPAPTDYRYPTIARSPTWQNLLLSLIPNPYNVDITTIAL 248
Query: 228 KEYIGILIAYYRG 240
+EY G+LI RG
Sbjct: 249 REYQGLLIYRLRG 261
>gi|229032461|ref|ZP_04188429.1| hypothetical protein bcere0028_45010 [Bacillus cereus AH1271]
gi|228728830|gb|EEL79838.1| hypothetical protein bcere0028_45010 [Bacillus cereus AH1271]
Length = 344
Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + IF + ++ FI + L + + + RP
Sbjct: 107 ILFFMLLPIINPASLFSPHFQPIFAGISLITVYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTAPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ K I
Sbjct: 210 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKHRSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 318
Query: 238 YR 239
+
Sbjct: 319 RK 320
>gi|197265841|ref|ZP_03165915.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197244096|gb|EDY26716.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
Length = 258
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F C++ L + + LL+ ++ Y + Q +
Sbjct: 27 LALLWFSRFQKTGKVFISVCWLAL-LLLSLQPVSDHLLRPIENRYP----TWQGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRA----NPGARLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|65322167|ref|ZP_00395126.1| COG1434: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
Length = 257
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I+S L + IF + ++ FI + L + + + RP
Sbjct: 20 ILFFMLLPIISPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP---- 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 73 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 122
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 123 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSI 182
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 183 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 231
Query: 238 YR 239
+
Sbjct: 232 RK 233
>gi|282896704|ref|ZP_06304712.1| hypothetical protein CRD_01413 [Raphidiopsis brookii D9]
gi|281198422|gb|EFA73310.1| hypothetical protein CRD_01413 [Raphidiopsis brookii D9]
Length = 263
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 26/254 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + L+++ L + + + + G G + L+ L++ P P+
Sbjct: 18 LASVSLVIALVSLWKRPKIAAVCIGTSLAILMIAGNGWVSKALVGSLEWQNIPPGKIPE- 76
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
IV+LG T P +S R+ +LY K II+SGG
Sbjct: 77 ---AEAIVVLGGATK--PAAWPRSTVDLNESGDRVIYAAQLYGQKK----APLIILSGGR 127
Query: 122 -DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D + G ES L+ G+ + I E SL+T++NA ++++ K ++LV+
Sbjct: 128 IDWRGSGPPESADMAAILISLGIPPEVIIEEPNSLNTYENAVNVRKILESRGIKKVLLVT 187
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAY--------------YSIIPLSANFYLTELA 226
SA H RS FQ G+ + +D++ + ++ P + N A
Sbjct: 188 SAMHTPRSLKIFQRQGVEVIPAPTDFIVSRSDLEELIATPKSTILNLFPSADNLNDFTNA 247
Query: 227 LKEYIGILIAYYRG 240
LKEYIG L+ RG
Sbjct: 248 LKEYIGYLVYALRG 261
>gi|229198964|ref|ZP_04325651.1| hypothetical protein bcere0001_44800 [Bacillus cereus m1293]
gi|228584510|gb|EEK42641.1| hypothetical protein bcere0001_44800 [Bacillus cereus m1293]
Length = 277
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 103/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L +FL +S + IF + ++ FI + L + + + RP
Sbjct: 40 ILFCILFLFISPASFFSSHFQPIFAGISLITVYFFIH---LSNFLSAYFLYQFNRP---- 92
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 93 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 142
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 143 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPDGKYKSI 202
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 203 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 251
Query: 238 YR 239
+
Sbjct: 252 RK 253
>gi|194443111|ref|YP_002040188.1| hypothetical protein SNSL254_A1023 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194401774|gb|ACF61996.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 258
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q I K+F +S L + + LL+ ++ Y + Q +
Sbjct: 27 LALLWFSRFQKIGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYP----TWQGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRA----NPGAKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEAGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|220933067|ref|YP_002509975.1| hypothetical protein Hore_22350 [Halothermothrix orenii H 168]
gi|219994377|gb|ACL70980.1| uncharacterized conserved protein [Halothermothrix orenii H 168]
Length = 256
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 17/248 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSP 60
L I+++++ + + +S R I ++C L+ +I + +L L L+ + +S
Sbjct: 17 LFLVIWVVITVYLIKKRSNRLIVGLACISLVLMYILSSAVGVMLFLIPLETKFPYYNISR 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K+ IV+LG G ++ P + R+ RLYK + T+I +G
Sbjct: 77 YDKELP--IVVLGGGINYFGEKGEGKLNP--ITLQRLVTGYRLYKEVET-----TLIFTG 127
Query: 121 GDPQKH-GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNII 177
G H G +E+ V L E G+ ++ + LE ++ +T++N + ++ G + +
Sbjct: 128 GQGIGHSGPSEADVAGEFLRELGINQEALVLENRARNTYENGLYVRDYLEQRNGLDRGVY 187
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASC----SDYLNAYYSIIPLSANFYLTELALKEYIGI 233
LV+SA HL R+ F+ + +D+ + P +N T A+ E+IG+
Sbjct: 188 LVTSAVHLPRAVGVFRRLNLKVVPVPAGYFADHTQGWLDFFPARSNLNATLAAIHEWIGL 247
Query: 234 LIAYYRGN 241
L RG
Sbjct: 248 LWYKVRGR 255
>gi|196041486|ref|ZP_03108779.1| conserved domain protein [Bacillus cereus NVH0597-99]
gi|196027734|gb|EDX66348.1| conserved domain protein [Bacillus cereus NVH0597-99]
Length = 345
Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L +F I+S L + IF ++++ FI + L + + + RP
Sbjct: 108 ILFFILFAILSPASLFSSHLEPIFAGISLIIVYFFIH---LSNFLTAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 211 GQGPDEGLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 319
Query: 238 YR 239
+
Sbjct: 320 RK 321
>gi|332184005|gb|AEE26259.1| putative exported protein [Francisella cf. novicida 3523]
Length = 228
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 67/233 (28%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+FLI + +F+ +++ IG GI+ +IL L+ + +
Sbjct: 10 LFLIALVIACILSKGYLRYFIVAITIIYYLIGNGILGSILAIPLKSE----STDIKACAN 65
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
I+LLG G +++P+ +Y RI +T +Y Q IIISGG P
Sbjct: 66 TKGIILLGAGINQA----FGKLQPALSAYDRILKTAEVYHQYPQQ-----IIISGGAPFG 116
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+E+ +Y + L + G+ + I LE S +T+QNA+F M+ + + LV+S H
Sbjct: 117 EKSSEAEIYADVLYKLGIPKSKIILEKNSKNTYQNAEFIKKMLVDDKI-TYCLVTSGIHY 175
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
KR+++ F F INT + S I+P + NFY+T+ + EY+GI+ Y
Sbjct: 176 KRAKIIFDKFAINTISIASSKFVPNIKILPNAYNFYITQNIIHEYLGIVKIYL 228
>gi|56413961|ref|YP_151036.1| hypothetical protein SPA1808 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362884|ref|YP_002142521.1| hypothetical protein SSPA1681 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56128218|gb|AAV77724.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094361|emb|CAR59873.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 258
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y + Q +
Sbjct: 27 LALVWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYP----TWQGPQQVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRA----NPGAKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVSARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|228936112|ref|ZP_04098918.1| hypothetical protein bthur0009_45540 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228823567|gb|EEM69393.1| hypothetical protein bthur0009_45540 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 302
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 53/242 (21%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L S +FL +S ++ IF + L+ FI + L + + + RP
Sbjct: 65 ILFSILFLFISPASFFSPHLQPIFGGISLITLYFFIH---LSNFLSAYFLYQFNRP---- 117
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 118 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 167
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 168 GQGPDEGLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 227
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 228 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 276
Query: 238 YR 239
+
Sbjct: 277 RK 278
>gi|168822078|ref|ZP_02834078.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|197247984|ref|YP_002145908.1| hypothetical protein SeAg_B0996 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197211687|gb|ACH49084.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205341539|gb|EDZ28303.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320085232|emb|CBY95017.1| Uncharacterized protein ycbC [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 258
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y + Q +
Sbjct: 27 LALLWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYP----TWQGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRA----NPGAKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRSDIITLDKPKDTEEEAVAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|118479923|ref|YP_897074.1| hypothetical protein BALH_4367 [Bacillus thuringiensis str. Al
Hakam]
gi|118419148|gb|ABK87567.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 350
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 103/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + IF + L+ FI + L + + + RP
Sbjct: 113 ILFFMLLPIINPASLFSPHFQPIFAGISLITLYFFIH---LSNFLSAYFLYQFNRP---- 165
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + + I++LG+G P + SRI + + Y + TII SG
Sbjct: 166 --RCNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 215
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 216 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSI 275
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 276 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 324
Query: 238 YR 239
+
Sbjct: 325 RK 326
>gi|238913237|ref|ZP_04657074.1| hypothetical protein SentesTe_19229 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 258
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y + Q +
Sbjct: 27 LALVWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYP----TWQGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRA----NPGAKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|229163803|ref|ZP_04291746.1| hypothetical protein bcere0009_45690 [Bacillus cereus R309803]
gi|228619623|gb|EEK76506.1| hypothetical protein bcere0009_45690 [Bacillus cereus R309803]
Length = 344
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + IF + ++ FI + L + + + RP
Sbjct: 107 ILFFMLLPIINPASLFSPHFQPIFAGISLITVYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ K I
Sbjct: 210 GQGPDEGLPEAEAMQKYAIEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPKGKYRSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIIVMG 318
Query: 238 YR 239
+
Sbjct: 319 RK 320
>gi|322616420|gb|EFY13329.1| hypothetical protein SEEM315_12463 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322619670|gb|EFY16545.1| hypothetical protein SEEM971_17457 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622634|gb|EFY19479.1| hypothetical protein SEEM973_13500 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629783|gb|EFY26558.1| hypothetical protein SEEM974_05201 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632495|gb|EFY29241.1| hypothetical protein SEEM201_14830 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637010|gb|EFY33713.1| hypothetical protein SEEM202_02105 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641450|gb|EFY38088.1| hypothetical protein SEEM954_01478 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646084|gb|EFY42600.1| hypothetical protein SEEM054_01055 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649614|gb|EFY46045.1| hypothetical protein SEEM675_15999 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322654084|gb|EFY50407.1| hypothetical protein SEEM965_12752 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322658616|gb|EFY54878.1| hypothetical protein SEEM19N_16617 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663473|gb|EFY59675.1| hypothetical protein SEEM801_11907 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670209|gb|EFY66349.1| hypothetical protein SEEM507_18684 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671445|gb|EFY67567.1| hypothetical protein SEEM877_09693 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676801|gb|EFY72868.1| hypothetical protein SEEM867_07841 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682726|gb|EFY78745.1| hypothetical protein SEEM180_06892 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686405|gb|EFY82387.1| hypothetical protein SEEM600_05870 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195928|gb|EFZ81095.1| hypothetical protein SEEM581_13156 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199784|gb|EFZ84873.1| hypothetical protein SEEM501_09338 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202777|gb|EFZ87813.1| hypothetical protein SEEM460_08274 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323209048|gb|EFZ93985.1| hypothetical protein SEEM020_20040 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323211524|gb|EFZ96363.1| hypothetical protein SEEM6152_19328 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217991|gb|EGA02706.1| hypothetical protein SEEM0077_06149 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222903|gb|EGA07253.1| hypothetical protein SEEM0047_13265 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323226597|gb|EGA10802.1| hypothetical protein SEEM0055_10125 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229793|gb|EGA13916.1| hypothetical protein SEEM0052_13182 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233018|gb|EGA17114.1| hypothetical protein SEEM3312_03134 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240753|gb|EGA24795.1| hypothetical protein SEEM5258_12744 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323243069|gb|EGA27090.1| hypothetical protein SEEM1156_20594 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249768|gb|EGA33670.1| hypothetical protein SEEM9199_12237 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252759|gb|EGA36597.1| hypothetical protein SEEM8282_16778 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257198|gb|EGA40899.1| hypothetical protein SEEM8283_02209 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323259996|gb|EGA43624.1| hypothetical protein SEEM8284_18093 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323268003|gb|EGA51482.1| hypothetical protein SEEM8285_13226 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269851|gb|EGA53300.1| hypothetical protein SEEM8287_20649 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 258
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y + Q +
Sbjct: 27 LALLWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYP----TWQGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRA----NPGAKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRNDIITLDKPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|190576332|ref|YP_001974177.1| putative exported lipoprotein [Stenotrophomonas maltophilia K279a]
gi|190014254|emb|CAQ47898.1| putative exported lipoprotein [Stenotrophomonas maltophilia K279a]
Length = 258
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 8/227 (3%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
+ + +R ++ L I +LL Q + P + IV
Sbjct: 12 CAVLVRKRHVRSGALLAVAPLAILASASAPITQLLLDLAQDA---PPSTATAHHPRTAIV 68
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G A P YSR+ + Y +C++ C +++SGG AE
Sbjct: 69 VLGAGIDQD----AHGSRPGLAGYSRLMAATQRYLACERTGESCVVLVSGGATAPDNAAE 124
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ VY +L+ GV + I E S++T+QNA SS MI+ ++LV+S HL+RS +
Sbjct: 125 ANVYARELIALGVPAEHIIREHASVNTWQNASNSSRMIQRDSV-RVVLVTSGLHLRRSLI 183
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
YF+HFG+ + SD L A +P + N L E+ L EYIG+L +
Sbjct: 184 YFRHFGVVAEGLPSDRLRASPGWLPSAYNLLLIEVMLHEYIGVLRYH 230
>gi|204929871|ref|ZP_03220892.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204320865|gb|EDZ06066.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 258
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y + Q +
Sbjct: 27 LALLWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYP----TWQGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRA----NPGAKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRNDIITLDKPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|209521954|ref|ZP_03270620.1| protein of unknown function DUF218 [Burkholderia sp. H160]
gi|209497609|gb|EDZ97798.1| protein of unknown function DUF218 [Burkholderia sp. H160]
Length = 212
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 68/214 (31%), Positives = 101/214 (47%), Gaps = 9/214 (4%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
++ F LL + GW P + L QR + I+LLG GT
Sbjct: 1 MIALFWLLAA--GWLTAPLLDLA----QPQRQSAAAATFAPRTAIILLGGGTIYDDD--- 51
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ P SRI + R Y +CK+ + C +I+SGG+PQ+H E+ Y LL V
Sbjct: 52 NVLVPPHDVLSRIEVSARNYAACKRTANICQVIVSGGNPQRHSATEADTYLPYLLRQQVA 111
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
R DI LE S T++NA+ S+++ +ILV+SAYH+ R+ L FQ FG+ + S
Sbjct: 112 RSDIVLEKTSRTTYENARNVSAIVGQSHYDTLILVTSAYHMPRALLDFQCFGVEPQPQIS 171
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
A ++P N E+AL E G+ +
Sbjct: 172 SARRARLGVLPRFENLLAAEIALHELAGLAQFHL 205
>gi|258627463|ref|ZP_05722244.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258580269|gb|EEW05237.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 287
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 23/244 (9%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQ 61
LI+ + L+ C ++LFSF G + + T LL L+ +Y L
Sbjct: 27 LLIIGFVGLMLIMFTAKRKTGCLVVLFSFTGLFLVSFQPVATRLLMPLERTYTAFL---P 83
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LGNG + IP E S + R+ E +R+ + M I+SG
Sbjct: 84 VEGTVDYIMVLGNGHVVDDDIPPTS-ELSRAALMRLTEGIRISRMYPGSKM----ILSGY 138
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ + + L GV + DI L + DT++ A+ +++ ++ K ++LV+S
Sbjct: 139 AGGSE-FSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQ---KRMVLVTS 194
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP + TE E +G+L
Sbjct: 195 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIAQPWDKYIPKARYLEQTEQYWYETLGLLW 254
Query: 236 AYYR 239
R
Sbjct: 255 QKLR 258
>gi|37523632|ref|NP_927009.1| hypothetical protein gll4063 [Gloeobacter violaceus PCC 7421]
gi|35214637|dbj|BAC92004.1| gll4063 [Gloeobacter violaceus PCC 7421]
Length = 260
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 63/249 (25%), Positives = 106/249 (42%), Gaps = 19/249 (7%)
Query: 3 LSWIFLIVSYWHL-LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LS + I + + ++ + +L + LL L+ Y P + +
Sbjct: 18 LSLVLTIAAATAIRFGRTKLATWLCGAIVLWLGSFSAPAVADALLWSLESQY--PEVPVE 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
IV+LG + R +S R+ RL+K+ K +++SGG
Sbjct: 76 NNPSAQAIVVLGGALHL--PNARHRTYELAESSDRVLHAARLFKAGK----APVVLMSGG 129
Query: 122 DPQKHG----LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+P H E+ E GV I E +S +TFQNA FS+ ++K + I+
Sbjct: 130 NPPFHTRPDQPPEATQMAAFARELGVPAGAILTEERSWNTFQNAAFSAEVLKARRMTRIL 189
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYI 231
LV+SA H+ RS F+ G A+ +D + + +P +A + LALKE++
Sbjct: 190 LVTSASHMPRSVAIFERAGFAVIAASTDVRSGTDLDDWLLAWLPSAAALESSTLALKEWV 249
Query: 232 GILIAYYRG 240
G+L+ RG
Sbjct: 250 GLLVYRLRG 258
>gi|218437457|ref|YP_002375786.1| hypothetical protein PCC7424_0452 [Cyanothece sp. PCC 7424]
gi|218170185|gb|ACK68918.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7424]
Length = 260
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 109/250 (43%), Gaps = 27/250 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
LS + L+ + + F ++ +++ G I L++ L++ P
Sbjct: 18 LSCVLLVTTLILWWKRPAWIPFPVTLALIILLVASNGWISNQLVQSLEWQ-----NIPSE 72
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
IVLLG G T P P ++ S Q R+ +LY K II SGG
Sbjct: 73 IPQAEAIVLLG-GATKPPAYPRPMVDMSEQG-DRVLYAAKLYLDQK----APLIIASGGR 126
Query: 122 -DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D + +ES N L GV I E SL+T++NA +++ K ++LV+
Sbjct: 127 IDWLSNEQSESADMANLLQLMGVPPQVIIQEPDSLNTYENATNVKKILQEKGIKQVLLVT 186
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAY--------------YSIIPLSANFYLTELA 226
SA H+ RS F+ GI+ A+ +D+L + +I+P S N T A
Sbjct: 187 SALHMPRSLFIFKKLGIDVIAAPTDFLVSRTELEPNNLTLEGIILNILPSSENLDRTTKA 246
Query: 227 LKEYIGILIA 236
LKEYIG+L+
Sbjct: 247 LKEYIGLLVY 256
>gi|196043859|ref|ZP_03111096.1| conserved domain protein [Bacillus cereus 03BB108]
gi|225866795|ref|YP_002752173.1| hypothetical protein BCA_4930 [Bacillus cereus 03BB102]
gi|229187061|ref|ZP_04314210.1| hypothetical protein bcere0004_46000 [Bacillus cereus BGSC 6E1]
gi|196025195|gb|EDX63865.1| conserved domain protein [Bacillus cereus 03BB108]
gi|225789384|gb|ACO29601.1| conserved domain protein [Bacillus cereus 03BB102]
gi|228596370|gb|EEK54041.1| hypothetical protein bcere0004_46000 [Bacillus cereus BGSC 6E1]
Length = 344
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 103/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + IF + L+ FI + L + + + RP
Sbjct: 107 ILFFMLLPIINPASLFSPHFQPIFAGISLITLYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RCNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 210 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 318
Query: 238 YR 239
+
Sbjct: 319 RK 320
>gi|157146390|ref|YP_001453709.1| hypothetical protein CKO_02149 [Citrobacter koseri ATCC BAA-895]
gi|157083595|gb|ABV13273.1| hypothetical protein CKO_02149 [Citrobacter koseri ATCC BAA-895]
Length = 259
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K F ++ +F + + LLK ++ SY + Q + +
Sbjct: 27 LALVWFSRFQKTGKAFISLGWLAIF-LLSLQPVADRLLKPIEDSYP----TWQGTQKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+ + + +I +G + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGVRLWLA----NPGSKLIFTGAAAKTNRV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + GV R DI Q DT + A+ I +LV+SA HL R+
Sbjct: 137 STAEAGARVAQSLGVPRSDIITLDQPKDTEEEAEAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G++ + ++ LN + IP ++ A E +G + + +G
Sbjct: 194 MIFFQHVGLHPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRIWQWLKG 251
>gi|260881233|ref|ZP_05403953.2| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
gi|260849348|gb|EEX69355.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
Length = 266
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 66/249 (26%), Positives = 111/249 (44%), Gaps = 21/249 (8%)
Query: 1 MLLSWIF---LIVSYWHLLCQSIRKIFFMSCFMLLFSF--IGWGIIPTILLKHLQFSYQR 55
+L IF L V W L + K F L F+F + G++ + L+ +YQ
Sbjct: 26 VLPPGIFILALFVLAWWLWKKRGEKRAAAVLFALTFAFYLLCTGLVAEKTMGWLESAYQ- 84
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
P + G++I++LG G SR+ +RL + +
Sbjct: 85 ----PPERPAGDVIIMLGGGAYSDTPDVDGTGTLCASPASRLLTAVRLQRQ-----LDVP 135
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I++SGG + AE+ + L+ GV D I ET+S++T QNA+FS+ +++ +
Sbjct: 136 ILLSGGQVYEDTGAEAKIAKRVLMSLGVPEDKILTETRSINTSQNARFSAEILRENGLSH 195
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKE 229
ILV+SA+H+KRS L F G+ + +DY+ A Y + P + L+E
Sbjct: 196 PILVTSAFHMKRSVLNFAKQGVAVEPFPTDYMVAHHPVFHYTKLRPQTEALLDNVTVLQE 255
Query: 230 YIGILIAYY 238
+ + Y
Sbjct: 256 TLRTFVTRY 264
>gi|183220138|ref|YP_001838134.1| hypothetical protein LEPBI_I0726 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910258|ref|YP_001961813.1| hypothetical protein LBF_0703 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774934|gb|ABZ93235.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778560|gb|ABZ96858.1| Conserved hypothetical protein; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 258
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 18/234 (7%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + +FF+ C L I L+ L+ Y P +S Q ++ ++LG
Sbjct: 32 RIKSGKTKFLFFIIC--LFLYLASSSFIANRLVTELEKEY--PPVSLQDAPKVDVAIVLG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA--ES 131
I ++ A S RI + +RLYK+ K I+ +GG E+
Sbjct: 88 GMIQTISSVKA--RPELTDSADRITDAIRLYKAGKVK----KILFTGGSGLLLSDTYREA 141
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ + ++ GV+ +DI LE S +T +NA + ++ ++ +L++SA+H+KRS
Sbjct: 142 DLAKSLFIDLGVKEEDIILENNSRNTHENAVETKKILMEKNFQSFLLITSAFHMKRSLGC 201
Query: 192 FQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
FQ +N +DY A+ +P + LT L++KE++G + +
Sbjct: 202 FQKQNLNVFPFPTDYRSFNTDSGAFELYLPSAGYLDLTTLSIKEWVGYFVYRTK 255
>gi|75906624|ref|YP_320920.1| hypothetical protein Ava_0399 [Anabaena variabilis ATCC 29413]
gi|75700349|gb|ABA20025.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 263
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 26/254 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + L+V+ L + ++ + L + L++ L++ P P
Sbjct: 18 LASVSLVVALVTLRKRPRIATTAIALSLTLLLLCSNAWVAKYLVRSLEWQNLPPAQLP-- 75
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ I++LG T + P + R+ +LY+ K II+SGG
Sbjct: 76 --NAEAIIVLGGATKSV--FPPRITPDLSEQGDRVIYAAQLYRQNK----APLIILSGGR 127
Query: 122 -DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D + G +ES N L G+ + E SL+T+QNA ++ + ++LV+
Sbjct: 128 IDWRGSGSSESTDMANILTSLGIPASVLIEEPDSLNTYQNAVNVKKILASRGIDKVLLVT 187
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL--------------NAYYSIIPLSANFYLTELA 226
SA H+ RS FQ G+N + +D+L A +++P + N +L A
Sbjct: 188 SALHMPRSLKIFQRQGMNVIPAPTDFLVSAGELQELGNTPKAAILNLLPDTYNLHLFTNA 247
Query: 227 LKEYIGILIAYYRG 240
LKEY+G I + RG
Sbjct: 248 LKEYVGSFIYWLRG 261
>gi|260459193|ref|ZP_05807448.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
gi|259034747|gb|EEW36003.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
Length = 265
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 16/247 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L ++ L ++ + + L+ + W + ++L L+ + RP L
Sbjct: 18 LTIFLLLAGLIAGMVGRRRLAVTGSVLAFLILALSAWTSLGAMMLNPLEERFARPPLP-- 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LG G + E S S R+ ET L + +++SGG
Sbjct: 76 --QKVDGIVVLGGGFEGAINLTRGGYELS-SSGDRMVETAILARRF----PQAKVVVSGG 128
Query: 122 DPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
+ G ++ L GV D + LE +S +T++NA FS +++ G+ +LV
Sbjct: 129 NGSLFLDGEGDADTAPRLLGPLGVSADRLVLEDKSRNTYENAVFSRKLVEPKPGETWLLV 188
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL-----SANFYLTELALKEYIGIL 234
+SA+H+ R++ F G T DY + + L + + T +A++E+IG+
Sbjct: 189 TSAFHMPRAKALFDKAGFPTVPWPVDYRTSGKEGVGLFRDNAADSLENTTMAIREWIGLF 248
Query: 235 IAYYRGN 241
+ G
Sbjct: 249 AYWLSGR 255
>gi|261211840|ref|ZP_05926127.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC341]
gi|260839190|gb|EEX65822.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. RC341]
Length = 273
Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 23/244 (9%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQ 61
LI+ + L+ C ++LFS G + + T LL L+ +Y L
Sbjct: 18 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL---P 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +++LGNG + IP E + + R+ E +R+ + +I+SG
Sbjct: 75 VEGTLDYVMVLGNGHVVDDDIPPTS-ELTRAALMRLTEGIRISRMY----PGSKLILSGY 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ + + L GV + DI L + DT++ A+ +++ ++ K ++LV+S
Sbjct: 130 AGGSE-VSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQ---KRMVLVTS 185
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP S TE E +G+L
Sbjct: 186 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIVQPWDKYIPKSRYLEQTEQYWYETLGLLW 245
Query: 236 AYYR 239
R
Sbjct: 246 QKLR 249
>gi|28897807|ref|NP_797412.1| hypothetical protein VP1033 [Vibrio parahaemolyticus RIMD 2210633]
gi|153838515|ref|ZP_01991182.1| integral membrane protein [Vibrio parahaemolyticus AQ3810]
gi|260876969|ref|ZP_05889324.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|260898706|ref|ZP_05907202.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466]
gi|260900663|ref|ZP_05909058.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037]
gi|28806020|dbj|BAC59296.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149748082|gb|EDM58941.1| integral membrane protein [Vibrio parahaemolyticus AQ3810]
gi|308089504|gb|EFO39199.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308093685|gb|EFO43380.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|308106719|gb|EFO44259.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037]
gi|328473218|gb|EGF44066.1| hypothetical protein VP10329_21110 [Vibrio parahaemolyticus 10329]
Length = 261
Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 23/224 (10%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
CF++LFSF+G + + T LL L+ ++ L + +++LGNG +
Sbjct: 38 GCFVVLFSFVGLFLVAFQPVSTKLLMPLEREHKAFLPVS---GTIDYVMVLGNGHVVDDE 94
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
IP + S + R+ E +R+ + +I+SG D ++ + + N L
Sbjct: 95 IPPTS-QLSRAALMRLTEGIRILRMY----PGAKLILSGYDGGSE-ISHARMMANVALAL 148
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + DI L + DT++ A+ +++ ++ K I+LV+SA H+ R+ F GI
Sbjct: 149 GVAKSDIILLEDAKDTWEEARQAAAFVQQ---KEIVLVTSASHMSRALYEFNAAGIKPIP 205
Query: 202 SCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +++L + P + TEL EY+G + R
Sbjct: 206 APTNFLAIDEVSQPWDKYSPKARYLEQTELFWHEYLGSVWQRLR 249
>gi|258621490|ref|ZP_05716524.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258586878|gb|EEW11593.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 287
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 23/244 (9%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQ 61
LI+ + L+ C ++LFS G + + T LL L+ +Y L
Sbjct: 27 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL---P 83
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +++LGNG + IP E S + R+ E +R+ + M I+SG
Sbjct: 84 VEGTIDYVMVLGNGHVVDDDIPPTS-ELSRAALMRLTEGIRISRMYPGSKM----ILSGY 138
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ + + L GV + DI L + DT++ A+ +++ ++ K ++LV+S
Sbjct: 139 AGGSE-FSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQ---KRMVLVTS 194
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP + TE E +G+L
Sbjct: 195 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIAQPWDKYIPKARYLEQTEQYWHETLGLLW 254
Query: 236 AYYR 239
R
Sbjct: 255 QKLR 258
>gi|30264869|ref|NP_847246.1| hypothetical protein BA_5055 [Bacillus anthracis str. Ames]
gi|47530355|ref|YP_021704.1| hypothetical protein GBAA_5055 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187685|ref|YP_030938.1| hypothetical protein BAS4694 [Bacillus anthracis str. Sterne]
gi|165869591|ref|ZP_02214249.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167633993|ref|ZP_02392316.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|167638097|ref|ZP_02396375.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|170685702|ref|ZP_02876925.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|170705528|ref|ZP_02895992.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|177651307|ref|ZP_02934138.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190567172|ref|ZP_03020087.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|227817596|ref|YP_002817605.1| hypothetical protein BAMEG_5089 [Bacillus anthracis str. CDC 684]
gi|229602236|ref|YP_002869074.1| hypothetical protein BAA_5066 [Bacillus anthracis str. A0248]
gi|254687608|ref|ZP_05151464.1| hypothetical protein BantC_27690 [Bacillus anthracis str.
CNEVA-9066]
gi|254725174|ref|ZP_05186957.1| hypothetical protein BantA1_22344 [Bacillus anthracis str. A1055]
gi|254736912|ref|ZP_05194618.1| hypothetical protein BantWNA_17226 [Bacillus anthracis str. Western
North America USA6153]
gi|254741947|ref|ZP_05199634.1| hypothetical protein BantKB_13153 [Bacillus anthracis str. Kruger
B]
gi|254754455|ref|ZP_05206490.1| hypothetical protein BantV_18392 [Bacillus anthracis str. Vollum]
gi|254757288|ref|ZP_05209315.1| hypothetical protein BantA9_03186 [Bacillus anthracis str.
Australia 94]
gi|30259544|gb|AAP28732.1| conserved domain protein [Bacillus anthracis str. Ames]
gi|47505503|gb|AAT34179.1| conserved domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49181612|gb|AAT56988.1| conserved domain protein [Bacillus anthracis str. Sterne]
gi|164714420|gb|EDR19939.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167513914|gb|EDR89282.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|167530794|gb|EDR93496.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|170129653|gb|EDS98516.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|170670166|gb|EDT20906.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|172083133|gb|EDT68195.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190561676|gb|EDV15646.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|227003708|gb|ACP13451.1| conserved domain protein [Bacillus anthracis str. CDC 684]
gi|229266644|gb|ACQ48281.1| conserved domain protein [Bacillus anthracis str. A0248]
Length = 345
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I+S L + IF + ++ FI + L + + + RP
Sbjct: 108 ILFFMLLPIISPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 211 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 319
Query: 238 YR 239
+
Sbjct: 320 RK 321
>gi|238027594|ref|YP_002911825.1| hypothetical protein bglu_1g20120 [Burkholderia glumae BGR1]
gi|237876788|gb|ACR29121.1| Hypothetical protein bglu_1g20120 [Burkholderia glumae BGR1]
Length = 238
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 10/241 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + L+ + + + +L GW P + L + P
Sbjct: 2 ILFNSFVLLFAAAAFWRTRRATLITLGLALLAGIATGWLTAPLVALAESGVA----PAEP 57
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
I++LG G + + P +RI L+ +C++ CT+I++G
Sbjct: 58 PVFAGRTAIIVLGAGIKRHDGL----LVPPENGLARIARAAELHSACQRSGARCTVIVTG 113
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDP +HG E+ +Y LLE GV D+ LE +S T++NAQ+++ ++ ILV+
Sbjct: 114 GDPHRHGTTEADLYAPLLLERGVPPRDLTLERRSRTTYENAQYTAPILLAKHYDETILVT 173
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL--IAYY 238
S+Y ++R+ L F FG+ + ++ A P NF AL E GI+ AY
Sbjct: 174 SSYQMRRALLDFARFGVTPQPVFANRDRAICGWRPRWTNFVTASRALHEIAGIIQFYAYR 233
Query: 239 R 239
R
Sbjct: 234 R 234
>gi|241668569|ref|ZP_04756147.1| hypothetical protein FphipA2_07371 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 239
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 68/238 (28%), Positives = 119/238 (50%), Gaps = 18/238 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKH--LQFSYQRPLLSP 60
+ ++F I+ + + +F+ +++ +G G+I IL K L+ +
Sbjct: 15 IGFLFFIILIIVCIFATGYLRYFVIIVTIIYYLVGNGLIANILAKPIRLEST------DI 68
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I+LLG G ++EPS +Y RI +T +Y Q IIISG
Sbjct: 69 KQCANTKAIILLGAGINQA----FDKLEPSLSAYDRILKTAEVYNQYPQD-----IIISG 119
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P + L+E+ VY + L + G+ + I+LE QS +T++NAQF+ ++ + L++
Sbjct: 120 GSPSGYKLSEAEVYADILYKLGIPKSKIRLEKQSKNTYENAQFTKKILSDHN-NTYCLIT 178
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H +R++L F F INT S L S +P + +FY+T+ + EY+GI+ Y
Sbjct: 179 GGIHYQRAKLIFDSFNINTINIASSKLAPEISFLPSAYSFYITQAIIHEYLGIIKFYL 236
>gi|52140703|ref|YP_086126.1| membrane spanning protein [Bacillus cereus E33L]
gi|51974172|gb|AAU15722.1| conserved hypothetical protein; possible membrane spanning protein
[Bacillus cereus E33L]
Length = 345
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I+S L + IF + ++ FI + L + + + RP
Sbjct: 108 ILFFMLLPIISPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 211 GQGPDEGLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 319
Query: 238 YR 239
+
Sbjct: 320 RK 321
>gi|254506071|ref|ZP_05118215.1| integral membrane protein [Vibrio parahaemolyticus 16]
gi|219550889|gb|EED27870.1| integral membrane protein [Vibrio parahaemolyticus 16]
Length = 268
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
CF++LFSFIG + + + LL L+ Y + + +++LG+G +
Sbjct: 38 GCFIVLFSFIGMFLIAFQPVSSRLLMPLERQYSAFF---PVDESIDYVMVLGSGHVVDDK 94
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
IP E S R+ E +R+ + +I+SG ++ + + L
Sbjct: 95 IPPTS-ELSRTGLMRLAEGIRVMRIY----PGSKLILSGYSG-GSDISNARMMAKVALAL 148
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + DI L + DT++ A+ +++ +K+ K +++V+SA H+KR+ F G+
Sbjct: 149 GVSKSDIILLETAKDTWEEARQAAAFVKH---KKMVVVTSASHMKRALNEFHSAGLKPYP 205
Query: 202 SCSDYLN------AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ ++YL + P + TE E +GIL R
Sbjct: 206 APTNYLAHDNVTEPWSKYTPKAVYLEQTERYWHETLGILWQKLR 249
>gi|228955081|ref|ZP_04117096.1| hypothetical protein bthur0006_44460 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228804591|gb|EEM51195.1| hypothetical protein bthur0006_44460 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 345
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 319
Query: 238 YR 239
+
Sbjct: 320 RK 321
>gi|228929853|ref|ZP_04092868.1| hypothetical protein bthur0010_45360 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228948549|ref|ZP_04110829.1| hypothetical protein bthur0007_46750 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229124367|ref|ZP_04253555.1| hypothetical protein bcere0016_46510 [Bacillus cereus 95/8201]
gi|228659019|gb|EEL14671.1| hypothetical protein bcere0016_46510 [Bacillus cereus 95/8201]
gi|228811148|gb|EEM57489.1| hypothetical protein bthur0007_46750 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228829769|gb|EEM75391.1| hypothetical protein bthur0010_45360 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 298
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I+S L + IF + ++ FI + L + + + RP
Sbjct: 61 ILFFMLLPIISPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP---- 113
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 114 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 163
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 164 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSI 223
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 224 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 272
Query: 238 YR 239
+
Sbjct: 273 RK 274
>gi|168233410|ref|ZP_02658468.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168237094|ref|ZP_02662152.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168243758|ref|ZP_02668690.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194447573|ref|YP_002044982.1| hypothetical protein SeHA_C1088 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194472169|ref|ZP_03078153.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194737227|ref|YP_002114042.1| hypothetical protein SeSA_A1104 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194405877|gb|ACF66096.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194458533|gb|EDX47372.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194712729|gb|ACF91950.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197289831|gb|EDY29192.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|205332431|gb|EDZ19195.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205337158|gb|EDZ23922.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 258
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y + Q +
Sbjct: 27 LALLWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYP----TWQGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRA----NPGARLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|16764350|ref|NP_459965.1| hypothetical protein STM0990 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161614771|ref|YP_001588736.1| hypothetical protein SPAB_02523 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167994940|ref|ZP_02576030.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168263514|ref|ZP_02685487.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168466584|ref|ZP_02700446.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|16419502|gb|AAL19924.1| putative KicA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|161364135|gb|ABX67903.1| hypothetical protein SPAB_02523 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|195630934|gb|EDX49520.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|205327272|gb|EDZ14036.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205347829|gb|EDZ34460.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|261246206|emb|CBG24010.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992729|gb|ACY87614.1| hypothetical protein STM14_1120 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157533|emb|CBW17023.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911976|dbj|BAJ35950.1| hypothetical protein STMDT12_C10070 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321223313|gb|EFX48382.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323129255|gb|ADX16685.1| hypothetical protein STM474_0976 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|332987881|gb|AEF06864.1| hypothetical protein STMUK_0956 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 258
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y + Q +
Sbjct: 27 LALLWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYP----TWQGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRA----NPGARLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|16759859|ref|NP_455476.1| hypothetical protein STY0992 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142368|ref|NP_805710.1| hypothetical protein t1944 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213052381|ref|ZP_03345259.1| hypothetical protein Salmoneentericaenterica_05289 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213424605|ref|ZP_03357388.1| hypothetical protein SentesTyphi_02341 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213581562|ref|ZP_03363388.1| hypothetical protein SentesTyph_10282 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213613211|ref|ZP_03371037.1| hypothetical protein SentesTyp_12289 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213650532|ref|ZP_03380585.1| hypothetical protein SentesTy_26823 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213857895|ref|ZP_03384866.1| hypothetical protein SentesT_22570 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|25347649|pir||AD0615 probable membrane protein STY0992 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16502152|emb|CAD05390.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137998|gb|AAO69559.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 258
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 20/239 (8%)
Query: 10 VSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ L +K F+S L + + LL+ ++ Y + Q +
Sbjct: 25 IGLALLWFSRFQKTGKVFISVGWLALLLLSLQPVSDHLLRPIENRYP----TWQGPQKVE 80
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T P A S R+ E +RL+++ + +I +GG + +
Sbjct: 81 YIVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRA----NPGARLIFTGGVAKTNT 135
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++ + V GV R DI + DT + A I +LV+SA HL R
Sbjct: 136 VSTAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPR 192
Query: 188 SQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ ++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 193 AMIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|229072307|ref|ZP_04205512.1| hypothetical protein bcere0025_44700 [Bacillus cereus F65185]
gi|229082056|ref|ZP_04214544.1| hypothetical protein bcere0023_46830 [Bacillus cereus Rock4-2]
gi|228701281|gb|EEL53779.1| hypothetical protein bcere0023_46830 [Bacillus cereus Rock4-2]
gi|228710844|gb|EEL62814.1| hypothetical protein bcere0025_44700 [Bacillus cereus F65185]
Length = 345
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 319
Query: 238 YR 239
+
Sbjct: 320 RK 321
>gi|228917456|ref|ZP_04081005.1| hypothetical protein bthur0012_46660 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228842128|gb|EEM87227.1| hypothetical protein bthur0012_46660 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 298
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 101/242 (41%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I+S L + IF + ++ FI + L + + + RP
Sbjct: 61 ILFFMLLPIISPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP---- 113
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 114 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 163
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ K I
Sbjct: 164 GQGPDEGLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMLFSKEIMDSLKPNGKYKSI 223
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 224 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 272
Query: 238 YR 239
+
Sbjct: 273 RK 274
>gi|254412764|ref|ZP_05026537.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196180499|gb|EDX75490.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 263
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 28/255 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + ++V+ + ++ +++ G + +++ L++ + P PQ
Sbjct: 18 LACVLMVVALVLSWKRPRLVPIPIALGLIILLVASNGWVANSMVQSLEWQHIPPTELPQ- 76
Query: 63 KKDGNIIVLLGNGTT-IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
IV+LG T IP PA + ++ R+F +LY+ K II SGG
Sbjct: 77 ---AEAIVILGGATRSAIPPRPAPDLN---EAGDRVFYGAQLYQQGK----APVIIASGG 126
Query: 122 D--PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
+ G ES L GV I + SL+T QNA +++ K ++LV
Sbjct: 127 RIEWRGGGSPESADMAQILEMIGVPPSAILQDPASLNTHQNAVNVRRILQQEGIKKVLLV 186
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAY--------------YSIIPLSANFYLTEL 225
+SA H R+ FQ GI + +D+L + +P + N +T
Sbjct: 187 TSAMHTPRALRVFQRQGIEAIPAPTDFLVTQQELNEPNSSLAAILLNGLPDAQNLDMTTR 246
Query: 226 ALKEYIGILIAYYRG 240
A+KEYIG + + RG
Sbjct: 247 AIKEYIGTAVYWLRG 261
>gi|298492074|ref|YP_003722251.1| hypothetical protein Aazo_3520 ['Nostoc azollae' 0708]
gi|298233992|gb|ADI65128.1| protein of unknown function DUF218 ['Nostoc azollae' 0708]
Length = 263
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 71/254 (27%), Positives = 110/254 (43%), Gaps = 26/254 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + LIV+ L + +S + L G + L++ L++ PQ
Sbjct: 18 LACVSLIVALVSLWKRPKIAAMAISLSLTLLLVCGNAWVAKNLVRSLEWQNIPLAEIPQ- 76
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
IV+LG G T P ++ S +S R+ +LY+ K I++SGG
Sbjct: 77 ---AEAIVVLG-GATKSGVWPRPTVDLS-ESGDRVIYAAQLYRQKK----APIIVLSGGR 127
Query: 123 PQKHGLA--ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G A ES L G+ + I E SL+T+QNA ++N K ++LV+
Sbjct: 128 IDWRGSASQESTDMAAILTSIGIPSEAIIQEPDSLNTYQNAVNVKETLENRGIKKVLLVT 187
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL--------------NAYYSIIPLSANFYLTELA 226
SA H R+ FQ GI+ + +D+L A +++P + N Y A
Sbjct: 188 SAMHTPRALKIFQRQGIDVIPAPTDFLVSQGELQELTSSPKGAILNLLPDTTNLYQFTNA 247
Query: 227 LKEYIGILIAYYRG 240
LKEYIG +I RG
Sbjct: 248 LKEYIGSVIYSLRG 261
>gi|229020045|ref|ZP_04176829.1| hypothetical protein bcere0030_45390 [Bacillus cereus AH1273]
gi|229026276|ref|ZP_04182635.1| hypothetical protein bcere0029_45540 [Bacillus cereus AH1272]
gi|228734992|gb|EEL85628.1| hypothetical protein bcere0029_45540 [Bacillus cereus AH1272]
gi|228741267|gb|EEL91481.1| hypothetical protein bcere0030_45390 [Bacillus cereus AH1273]
Length = 344
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 104/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + IF + ++ FI + L + + + RP
Sbjct: 107 ILFLMLLPIINPASLFSSHFQPIFAGIFLISVYFFIH---LSNFLTAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 210 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMSFSKKIMDSLKPEGKYRSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 318
Query: 238 YR 239
+
Sbjct: 319 RK 320
>gi|229158416|ref|ZP_04286478.1| hypothetical protein bcere0010_45910 [Bacillus cereus ATCC 4342]
gi|228625023|gb|EEK81788.1| hypothetical protein bcere0010_45910 [Bacillus cereus ATCC 4342]
Length = 298
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 103/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + IF + ++ FI + L + + + RP
Sbjct: 61 ILFFMLLPIINPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP---- 113
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 114 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 163
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 164 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMSFSKDIMDSLKPDGKYRSI 223
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 224 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 272
Query: 238 YR 239
+
Sbjct: 273 RK 274
>gi|229153006|ref|ZP_04281187.1| hypothetical protein bcere0011_45370 [Bacillus cereus m1550]
gi|228630426|gb|EEK87074.1| hypothetical protein bcere0011_45370 [Bacillus cereus m1550]
Length = 345
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 319
Query: 238 YR 239
+
Sbjct: 320 RK 321
>gi|167553009|ref|ZP_02346759.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205322470|gb|EDZ10309.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 258
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y + Q +
Sbjct: 27 LALLWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYP----TWQGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRA----NPGARLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|118497421|ref|YP_898471.1| hypothetical protein FTN_0829 [Francisella tularensis subsp.
novicida U112]
gi|118423327|gb|ABK89717.1| conserved hypothetical membrane protein [Francisella novicida U112]
Length = 239
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+FLI + +F+ +++ IG G++ TIL L+ + +
Sbjct: 18 LFLIALIITCIFSKGYLRYFIVALTIVYYLIGNGVLGTILALPLKSE----STDIKACAN 73
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
I+LLG G ++EP+ +Y RI +T +Y Q IIISGG P
Sbjct: 74 TKGIILLGAGINDA----FGKLEPALSAYDRILKTAEVYHQYPQQ-----IIISGGAPFG 124
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
L+E+ +Y + L + G+ + I LE S +T+QNA+F ++ N + LV+ H
Sbjct: 125 EKLSEAEIYADVLDKLGIPKSKIILEKNSKNTYQNAEFIKKILINDK-NTYCLVTGGIHY 183
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
KR+++ F F INT + S I+P + NFY+T+ + EY+GI+ Y
Sbjct: 184 KRAKIIFDKFAINTISIASSKFVPNIKILPNAYNFYITQNIVHEYLGIIRIYL 236
>gi|196032709|ref|ZP_03100122.1| conserved domain protein [Bacillus cereus W]
gi|195994138|gb|EDX58093.1| conserved domain protein [Bacillus cereus W]
Length = 291
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I+S L + IF + ++ FI + L + + + RP
Sbjct: 54 ILFFMLLPIISPASLFSSHLEPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP---- 106
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 107 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 156
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 157 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSI 216
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 217 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 265
Query: 238 YR 239
+
Sbjct: 266 RK 267
>gi|54309547|ref|YP_130567.1| hypothetical protein PBPRA2380 [Photobacterium profundum SS9]
gi|46913983|emb|CAG20765.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 284
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 58/245 (23%), Positives = 110/245 (44%), Gaps = 20/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L +I L++ W + + F F+ +F + + I T LL+ L+ Q + S
Sbjct: 19 LILGFIGLLI-LWFTRRKGLASGFIAFAFLGIFM-VSFQPIATSLLRPLETENQPFVPSS 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG+G I +P I E S + R+ E MR+Y+ +I+SG
Sbjct: 77 T---PVDYIMVLGSGHVIDKAMP-ITSELSRAALMRLSEGMRIYRLF----PGSKLILSG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++++ + L GV + DI L + DT++ A ++S++ KN++LV+
Sbjct: 129 Y-GGGSDISQARMMAKVALALGVNKSDILLLETARDTWEEAFQAASVV---GDKNMVLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ F G+ + +++L + P + TE E +G +
Sbjct: 185 SASHMTRALYEFNQAGLTPTPAPTNFLASNKIKQPWDRYAPKAKYLEQTERYWHETMGQI 244
Query: 235 IAYYR 239
R
Sbjct: 245 WQRIR 249
>gi|229093911|ref|ZP_04225003.1| hypothetical protein bcere0021_46320 [Bacillus cereus Rock3-42]
gi|228689472|gb|EEL43285.1| hypothetical protein bcere0021_46320 [Bacillus cereus Rock3-42]
Length = 298
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I+S L + IF + ++ FI + L + + + RP
Sbjct: 61 ILFFMLLPIISPASLFSSHLAPIFAGISLITVYFFIH---LSNFLTAYFLYQFNRP---- 113
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 114 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 163
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 164 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 223
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 224 FTTNNFHLFRAGIYAKQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 272
Query: 238 YR 239
+
Sbjct: 273 RK 274
>gi|62179518|ref|YP_215935.1| hypothetical protein SC0948 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|198245262|ref|YP_002214914.1| hypothetical protein SeD_A1055 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389922|ref|ZP_03216533.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205352197|ref|YP_002225998.1| hypothetical protein SG0932 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856381|ref|YP_002243032.1| hypothetical protein SEN0894 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224582800|ref|YP_002636598.1| hypothetical protein SPC_0991 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|62127151|gb|AAX64854.1| putative KicA protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|197939778|gb|ACH77111.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199602367|gb|EDZ00913.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205271978|emb|CAR36822.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708184|emb|CAR32477.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224467327|gb|ACN45157.1| hypothetical protein SPC_0991 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322713985|gb|EFZ05556.1| Uncharacterized protein ycbC [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|326622667|gb|EGE29012.1| hypothetical protein SD3246_1028 [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326627241|gb|EGE33584.1| hypothetical protein SG9_0953 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 258
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q K+F +S L + + LL+ ++ Y + Q +
Sbjct: 27 LALLWFSRFQKTGKVF-ISVGWLALLLLSLQPVSDHLLRPIENRYP----TWQGPQKVEY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL+++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRA----NPGARLIFTGGIAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R DI + DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQH G+N + ++ LN + IP ++ A E +G L + +G
Sbjct: 194 MIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWLKG 251
>gi|42784000|ref|NP_981247.1| hypothetical protein BCE_4954 [Bacillus cereus ATCC 10987]
gi|42739930|gb|AAS43855.1| conserved domain protein [Bacillus cereus ATCC 10987]
Length = 345
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I+S L + IF + ++ FI + L + + + RP
Sbjct: 108 ILFFMLLPIISPASLFSSHFQPIFAGISLITVYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ + N I
Sbjct: 211 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYNSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 319
Query: 238 YR 239
+
Sbjct: 320 RK 321
>gi|195536112|ref|ZP_03079119.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
gi|194372589|gb|EDX27300.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
Length = 241
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+FLI + +F+ +++ IG G++ TIL L+ + +
Sbjct: 20 LFLIALIITCIFSKGYLRYFIVALTIVYYLIGNGVLGTILALPLKSE----STDIKACAN 75
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
I+LLG G ++EP+ +Y RI +T +Y Q IIISGG P
Sbjct: 76 TKGIILLGAGINDA----FGKLEPALSAYDRILKTAEVYHQYPQQ-----IIISGGAPFG 126
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
L+E+ +Y + L + G+ + I LE S +T+QNA+F ++ N + LV+ H
Sbjct: 127 EKLSEAEIYADVLDKLGIPKSKIILEKNSKNTYQNAEFIKKILINDK-NTYCLVTGGIHY 185
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
KR+++ F F INT + S I+P + NFY+T+ + EY+GI+ Y
Sbjct: 186 KRAKIIFDKFAINTISIASSKFVPNIKILPNAYNFYITQNIVHEYLGIIRIYL 238
>gi|194431483|ref|ZP_03063775.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|194420308|gb|EDX36385.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|320182013|gb|EFW56918.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Shigella boydii ATCC 9905]
gi|332091384|gb|EGI96471.1| hypothetical protein SD15574_2367 [Shigella dysenteriae 155-74]
gi|332092552|gb|EGI97625.1| hypothetical protein SB521682_1309 [Shigella boydii 5216-82]
Length = 259
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF + L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIFISIGWPALL-LLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV + I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPHEQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|90413116|ref|ZP_01221113.1| hypothetical protein P3TCK_00775 [Photobacterium profundum 3TCK]
gi|90325959|gb|EAS42405.1| hypothetical protein P3TCK_00775 [Photobacterium profundum 3TCK]
Length = 284
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 59/245 (24%), Positives = 111/245 (45%), Gaps = 20/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L +I L++ W + + F F+ +F + + I T LL+ L+ Q + S
Sbjct: 19 LILGFIGLLI-LWFTRRKGLASCFIAFAFLGIFM-VAFQPIATSLLRPLETENQPFVPSS 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG+G I +P I E S + R+ E MR+Y+ +I+SG
Sbjct: 77 T---PVDYIMVLGSGHVIDKAMP-ITSELSRTALMRLSEGMRIYRLF----PGAKLILSG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++++ + L GV + DI L + DT++ A ++S++ N KN++LV+
Sbjct: 129 Y-GGGSDISQARMMAKVALALGVNKSDILLLETARDTWEEAFQAASVVGN---KNLVLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ F G+ + +++L + P + TE E +G +
Sbjct: 185 SASHMTRALYEFNQAGLTPTPAPTNFLASNKIKQPWDRYAPKAKYLEQTERYWHETMGQI 244
Query: 235 IAYYR 239
R
Sbjct: 245 WQRIR 249
>gi|188534261|ref|YP_001908058.1| hypothetical protein ETA_21340 [Erwinia tasmaniensis Et1/99]
gi|188029303|emb|CAO97180.1| Conserved hypothetical protein YcbC [Erwinia tasmaniensis Et1/99]
Length = 262
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 19/233 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q + +S L+ I + LL L+ Y S ++ + IV+L
Sbjct: 31 WFSRWQKSARTL-ISVAWLVLLLISLQPVADRLLAPLENRYP----SWHNQQPLDYIVVL 85
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T P + S R+ E +R++ + +I +GG Q + L+ +
Sbjct: 86 GGGYTWNPQWAPSSNMLN-NSLPRLAEGIRIWHE----NPRAKLIFTGGKAQGNPLSSAA 140
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V N G+ + + + DT Q A + ++ N + LV+SA HL R+ LYF
Sbjct: 141 VTANTARSLGIPDGAMIILDRPRDTEQEAHEVAKIVTN---RPFALVTSANHLPRAMLYF 197
Query: 193 QHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
Q G+ + ++ LN + ++P S +E AL E IG + + +
Sbjct: 198 QQEGLQPWPAPANQLAIASPLNLWERVLPSSFWLGHSERALYESIGRMWQWLK 250
>gi|282900121|ref|ZP_06308078.1| protein of unknown function DUF218 [Cylindrospermopsis raciborskii
CS-505]
gi|281195003|gb|EFA69943.1| protein of unknown function DUF218 [Cylindrospermopsis raciborskii
CS-505]
Length = 263
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 26/254 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ I L+++ L + ++ + + G G + L+ L++ PQ
Sbjct: 18 LASISLVIALIILWKRPKIAAGWIGISLAILIISGNGWVSKSLVASLEWQNIPLEKIPQ- 76
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
IV+LG T P +S R+ +LY K II+SGG
Sbjct: 77 ---AEAIVVLGGATK--PAAWPRSTVDLNESGDRVIYAAQLYGQKK----APLIILSGGR 127
Query: 122 -DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D + G ES L+ G+ + I E SL+T++NA ++++ K ++LV+
Sbjct: 128 IDWRGGGTPESADMATILISLGIPPEVIIEEPNSLNTYENAVNVKKILESRGIKKVLLVT 187
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAY--------------YSIIPLSANFYLTELA 226
SA H RS FQ G+ + +D++ + ++ P + N A
Sbjct: 188 SAMHTPRSLKIFQRQGVEVIPAPTDFIVSRSDLEELIATPKSTILNLFPSADNLNDFTNA 247
Query: 227 LKEYIGILIAYYRG 240
LKEYIG L+ RG
Sbjct: 248 LKEYIGYLVYALRG 261
>gi|45656706|ref|YP_000792.1| hypothetical protein LIC10815 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|294828296|ref|NP_713526.2| hypothetical protein LA_3345 [Leptospira interrogans serovar Lai
str. 56601]
gi|45599942|gb|AAS69429.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|293386147|gb|AAN50544.2| conserved hypothetical protein [Leptospira interrogans serovar Lai
str. 56601]
Length = 258
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 106/229 (46%), Gaps = 15/229 (6%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++ F + +L + + L++ L+ Y P +S + ++I++LG +
Sbjct: 36 KKWKEKFSVWLPVLFLWILSTSTVSQKLIQSLEMYY--PPVSLEQLPKADVILVLGGMVS 93
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK--HGLAESIVYN 135
+ F S R+ ET+RLY++ K I+ SGG + ES
Sbjct: 94 TLS--IHDEPVDLFNSAERLTETVRLYRAKK----APKILFSGGSGNLFYQTVPESEPAG 147
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L + G+ + LE++S +T +N F+ ++K ++ILV+S++H+KRS FQ
Sbjct: 148 RFLKQMGIPDSSLILESKSRNTAENKSFAVGLLKEHGWNSVILVTSSFHMKRSVEIFQEN 207
Query: 196 GINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
GI +D+ + + P + + +++KE+IGIL+ R
Sbjct: 208 GITIIPFPTDFRSQKSVLTLDNFFPSTGCLENSTISIKEWIGILVHKIR 256
>gi|167628013|ref|YP_001678513.1| hypothetical protein Fphi_1785 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167598014|gb|ABZ88012.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 231
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 69/238 (28%), Positives = 120/238 (50%), Gaps = 18/238 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKH--LQFSYQRPLLSP 60
+ ++F I+ + + +F+ +++ +G G+I IL K L+ +
Sbjct: 7 IGFLFFIILIIVCIFATGYLRYFVIIVTIIYYLVGNGVIGNILAKPIRLEST------DI 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I+LLG G ++EPS +Y RI +T +Y Q IIISG
Sbjct: 61 KQCANTKAIILLGAGINQA----FDKLEPSLSAYDRILKTAEVYNQYPQD-----IIISG 111
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P + L+E+ VY + L + G+ + I+LE QS +T++NAQF+ +++ + L++
Sbjct: 112 GSPSGYKLSEAEVYADILYKLGIPKSKIRLEKQSKNTYENAQFTKNILSDHN-NTYCLIT 170
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H +R++L F F INT S L S +P + NFY+T+ + EY+GI+ Y
Sbjct: 171 GGIHYQRAKLIFDSFNINTINIASSKLAPEISFLPSAYNFYITQAIIHEYLGIVKFYL 228
>gi|301056307|ref|YP_003794518.1| hypothetical protein BACI_c47980 [Bacillus anthracis CI]
gi|300378476|gb|ADK07380.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
Length = 345
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LL + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 108 ILLFMLLPIINPASLVSSHFQPIFAGISLISVYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 211 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 319
Query: 238 YR 239
+
Sbjct: 320 RK 321
>gi|228941987|ref|ZP_04104530.1| hypothetical protein bthur0008_46210 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228974918|ref|ZP_04135479.1| hypothetical protein bthur0003_46680 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981511|ref|ZP_04141808.1| hypothetical protein bthur0002_46720 [Bacillus thuringiensis Bt407]
gi|228778190|gb|EEM26460.1| hypothetical protein bthur0002_46720 [Bacillus thuringiensis Bt407]
gi|228784771|gb|EEM32789.1| hypothetical protein bthur0003_46680 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228817656|gb|EEM63738.1| hypothetical protein bthur0008_46210 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 345
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ + +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 211 GQGPDEGLPEAEAMQSYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 319
Query: 238 YR 239
+
Sbjct: 320 RK 321
>gi|254372782|ref|ZP_04988271.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570509|gb|EDN36163.1| conserved hypothetical protein [Francisella novicida GA99-3549]
Length = 231
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+FLI + +F+ +++ IG G++ TIL L+ + +
Sbjct: 10 LFLIALIIACIFSKGYLRYFIVALTIVYYLIGNGVLGTILALPLKSE----STDIKACAN 65
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
I+LLG G ++EP+ +Y RI +T +Y Q IIISGG P
Sbjct: 66 TKGIILLGAGINDA----FGKLEPALSAYDRILKTAEVYHQHPQQ-----IIISGGAPFG 116
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
L+E+ +Y + L + G+ + I LE S +T+QNA+F ++ N + LV+ H
Sbjct: 117 EKLSEAEIYADLLDKLGIPKSKIILEKNSKNTYQNAEFIKKILMNDK-NTYCLVTGGIHY 175
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
KR+++ F F INT + S I+P + NFY+T+ + EY+GI+ Y
Sbjct: 176 KRAKIIFDKFAINTISIASSKFVPNIKILPNAYNFYITQNIVHEYLGIIRIYL 228
>gi|208779215|ref|ZP_03246561.1| conserved hypothetical protein [Francisella novicida FTG]
gi|208745015|gb|EDZ91313.1| conserved hypothetical protein [Francisella novicida FTG]
Length = 231
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 69/233 (29%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+FLI + +F+ +++ IG G++ TIL L+ + +
Sbjct: 10 LFLIALIIAYIFSKGYLRYFIVALTIVYYLIGNGVLGTILALPLKSE----STDIKACAN 65
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
I+LLG G ++EP+ +Y RI +T +Y Q IIISGG P
Sbjct: 66 TKGIILLGAGINDA----FGKLEPALSAYDRILKTAEVYHQYPQQ-----IIISGGAPFG 116
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
L+E+ +Y + L + G+ + I LE S +T+QNA+F ++ N + LV+ H
Sbjct: 117 EKLSEAEIYADVLDKLGIPKSKIILEKNSKNTYQNAEFIKKILMNDK-NTYCLVTGGIHY 175
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
KR+++ F F INT + S I+P S NFY+T+ + EY+GI+ Y
Sbjct: 176 KRAKIIFDKFAINTISIASSKFVPNIKILPNSYNFYITQNIVHEYLGIIRIYL 228
>gi|262171274|ref|ZP_06038952.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio mimicus MB-451]
gi|261892350|gb|EEY38336.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio mimicus MB-451]
Length = 277
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 23/244 (9%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQ 61
LI+ + L+ C ++LFS G + + T LL L+ +Y L
Sbjct: 18 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL---P 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +++LGNG + IP E S + R+ E +R+ + M I+SG
Sbjct: 75 VEGTIDYVMVLGNGHVVDDDIPPTS-ELSRAALMRLTEGIRISRMYPGSKM----ILSGY 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ + + L GV + DI L + DT++ A+ +++ ++ K ++LV+S
Sbjct: 130 AGGSE-FSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQ---KRMVLVTS 185
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP + TE E +G+L
Sbjct: 186 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIAQPWDKYIPKARYLEQTEQYWYETLGLLW 245
Query: 236 AYYR 239
R
Sbjct: 246 QKLR 249
>gi|254877103|ref|ZP_05249813.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843124|gb|EET21538.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 231
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 68/238 (28%), Positives = 119/238 (50%), Gaps = 18/238 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKH--LQFSYQRPLLSP 60
+ ++F I+ + + +F+ +++ +G G+I IL K L+ +
Sbjct: 7 IGFLFFIILIIVCIFATGYLRYFVIIVTIIYYLVGNGLIANILAKPIRLEST------DI 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I+LLG G ++EPS +Y RI +T +Y Q IIISG
Sbjct: 61 KQCANTKAIILLGAGINQA----FDKLEPSLSAYDRILKTAEVYNQYPQD-----IIISG 111
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P + L+E+ VY + L + G+ + I+LE QS +T++NAQF+ ++ + L++
Sbjct: 112 GSPSGYKLSEAEVYADILYKLGIPKSKIRLEKQSKNTYENAQFTKKILSDHN-NTYCLIT 170
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H +R++L F F INT S L S +P + +FY+T+ + EY+GI+ Y
Sbjct: 171 GGIHYQRAKLIFDSFNINTINIASSKLAPEISFLPSAYSFYITQAIIHEYLGIIKFYL 228
>gi|313672214|ref|YP_004050325.1| hypothetical protein Calni_0249 [Calditerrivibrio nitroreducens DSM
19672]
gi|312938970|gb|ADR18162.1| protein of unknown function DUF218 [Calditerrivibrio nitroreducens
DSM 19672]
Length = 238
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 66/248 (26%), Positives = 118/248 (47%), Gaps = 30/248 (12%)
Query: 1 MLLSWIFL---IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
++ WIF+ I+ + L +FF + + LFS + IL+ ++ Y
Sbjct: 12 LIPPWIFIVGFILGGYFLKGFKRYLLFFFAVMLYLFS---ISPVKDILIYPIEKDYIN-- 66
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
K DG+IIV+LG G + S ++ R+ + K II
Sbjct: 67 ----LKCDGDIIVVLGGGVYGNGEL-------SEDAFKRVVKGFE-----KGRGGDKIII 110
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NI 176
+SGG + E+ V + L+ G+ +I ++ S DT +NA+F+ +++ K ++
Sbjct: 111 VSGGRVSESYPYEAEVMKDLLVTLGIREGNIIMDKDSKDTVENAKFTKKIVEEKGIKGDV 170
Query: 177 ILVSSAYHLKRSQLYFQHFGINTK-ASCSDY----LNAYYSIIPLSANFYLTELALKEYI 231
IL++SAYH+KR L F+ +G + A+ +D+ + + Y +P ++N ALKEY+
Sbjct: 171 ILITSAYHMKRGILIFKKYGFDNICAAATDFKFDGVYSIYDFLPSASNLNTVSKALKEYL 230
Query: 232 GILIAYYR 239
GIL +
Sbjct: 231 GILFYRIK 238
>gi|163802067|ref|ZP_02195963.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Vibrio sp. AND4]
gi|159174208|gb|EDP59016.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Vibrio sp. AND4]
Length = 268
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 23/226 (10%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
CF++LFSF+G + + T LL L+ Y+ L + +++LGNG +
Sbjct: 38 GCFVVLFSFVGIFLVAFQPVSTKLLMPLEREYKAFLPVS---GSIDYVMVLGNGHVVDNE 94
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
IP + S + R+ E +R+ + +I+SG ++ + + N L
Sbjct: 95 IPPTS-QLSRTALMRLTEGIRILRMY----PGAKLILSGYAGGSE-ISHARMMANVALSL 148
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + DI L + DT++ A+ +++ +K K+I+LV+SA H+KR+ F GI
Sbjct: 149 GVAKSDIILLEDAEDTWEEARQAAAFVKQ---KDIVLVTSASHMKRALYEFHAAGIKPIP 205
Query: 202 SCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ ++++ ++ P + TEL E++G L R N
Sbjct: 206 APTNFMAIDEIEQSWQKYAPKARYLEQTELYWYEFLGGLWQKLRDN 251
>gi|167894539|ref|ZP_02481941.1| hypothetical protein Bpse7_12379 [Burkholderia pseudomallei 7894]
Length = 240
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 14/247 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI---GWGIIPTILLKHLQFSYQRPL 57
M+L F ++ LLC+ R F + ++ GW P + L P+
Sbjct: 1 MILFNSFGLLFVVFLLCRKRRGAFAILAAGAALLWLIASGWLAAPLVALAQAGMQ---PV 57
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P D +IV+LG G + P + +RI +T LY +C++ ++ CT++
Sbjct: 58 AHPTMTGD-TVIVMLGAGIERRDGV----AIPPRDALARIDKTAELYSACRRTALRCTVV 112
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGGDPQ G+AE+ Y LL GV D+ E +S T++NA+F++ +++ ++I
Sbjct: 113 VSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLI 172
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL--- 234
LV+S+Y +KR+ L F+ FG + ++ +A +P +AN ELAL E +G+
Sbjct: 173 LVTSSYQMKRALLDFERFGFAPQPVYANRRDARLGWLPRAANLANAELALHEIVGVAQFH 232
Query: 235 IAYYRGN 241
+ G
Sbjct: 233 VYRRLGR 239
>gi|229193086|ref|ZP_04320041.1| hypothetical protein bcere0002_47360 [Bacillus cereus ATCC 10876]
gi|228590350|gb|EEK48214.1| hypothetical protein bcere0002_47360 [Bacillus cereus ATCC 10876]
Length = 345
Score = 171 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + II SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPIIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 319
Query: 238 YR 239
+
Sbjct: 320 RK 321
>gi|30022866|ref|NP_834497.1| hypothetical protein BC4795 [Bacillus cereus ATCC 14579]
gi|229130080|ref|ZP_04259042.1| hypothetical protein bcere0015_45180 [Bacillus cereus BDRD-Cer4]
gi|29898425|gb|AAP11698.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579]
gi|228653397|gb|EEL09273.1| hypothetical protein bcere0015_45180 [Bacillus cereus BDRD-Cer4]
Length = 345
Score = 171 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISIYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPIEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 319
Query: 238 YR 239
+
Sbjct: 320 RK 321
>gi|229062493|ref|ZP_04199806.1| hypothetical protein bcere0026_45600 [Bacillus cereus AH603]
gi|228716776|gb|EEL68467.1| hypothetical protein bcere0026_45600 [Bacillus cereus AH603]
Length = 344
Score = 171 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 104/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + IF + ++ FI + L + + + RP
Sbjct: 107 ILFFIMLSIINPASLFSAHFQFIFAAISLITMYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 210 GQGPDEGLPEAEAMQKYAVEKGIPPEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 318
Query: 238 YR 239
+
Sbjct: 319 RK 320
>gi|116329099|ref|YP_798819.1| hypothetical protein LBL_2520 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330291|ref|YP_800009.1| hypothetical protein LBJ_0560 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116121843|gb|ABJ79886.1| conserved hypothetical protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116123980|gb|ABJ75251.1| conserved hypothetical protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 273
Score = 171 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 105/229 (45%), Gaps = 15/229 (6%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++ F + +L+ + I L++ L+ Y P L + ++I++LG +
Sbjct: 34 KKWKEKFSVWAPVLILWLLSTSNISQKLIQSLEIYY--PPLPLEQVPRADVILVLGGMVS 91
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK--HGLAESIVYN 135
+ + S R+ ET+RLY++ K I+ SGG + ES
Sbjct: 92 TLSIHN--KPVDLSNSAERLTETVRLYRAKK----APKILFSGGSGNLLYQTVPESEPAG 145
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L + G+ + LE++S +T +N F+ ++K ++ILV+S++H+KRS FQ
Sbjct: 146 RFLKQMGIPDSSLILESKSRNTVENKNFAVELLKKHGWSSVILVTSSFHMKRSVEIFQEK 205
Query: 196 GINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
GI +D+ + P + + +++KE+IGIL+ R
Sbjct: 206 GITIIPFPTDFRTQKSVLTLDNFFPSTGCLENSTISIKEWIGILVHKIR 254
>gi|328676916|gb|AEB27786.1| putative exported protein [Francisella cf. novicida Fx1]
Length = 231
Score = 171 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 14/233 (6%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+FLI + +F+ +++ I G++ TIL L+ + + ++
Sbjct: 10 LFLIALIIACIFSKGYLRYFIVALTIVYYLIANGVLGTILALPLKSE----STNIKACEN 65
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
I+LLG G ++EP+ +Y RI +T +Y Q IIISGG P
Sbjct: 66 TKGIILLGAGINDA----FGKLEPALSAYDRILKTAEVYHQYPQQ-----IIISGGAPFG 116
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
L+E+ +Y + L + G+ + I LE S +T+QNA+F ++ N + LV+ H
Sbjct: 117 EKLSEAEIYADVLDKLGIPKSKIILEKNSKNTYQNAEFIKKILMNDK-NTYCLVTGGIHY 175
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
KR+++ F F INT + S I+P S NFY+T+ + EY+GI+ Y
Sbjct: 176 KRAKIIFDKFAINTISIASSKFVPNIKILPNSYNFYITQNIVHEYLGIIRIYL 228
>gi|255744859|ref|ZP_05418809.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholera CIRS 101]
gi|262161858|ref|ZP_06030876.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae INDRE 91/1]
gi|262189661|ref|ZP_06048039.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae CT 5369-93]
gi|255737330|gb|EET92725.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholera CIRS 101]
gi|262028590|gb|EEY47245.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae INDRE 91/1]
gi|262034459|gb|EEY52821.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae CT 5369-93]
gi|327484319|gb|AEA78726.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio cholerae LMA3894-4]
Length = 273
Score = 171 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 23/244 (9%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQ 61
LI+ + L+ C ++LFS G + + T LL L+ +Y L
Sbjct: 18 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL---P 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +++LGNG I IP E + + R+ E +R+ + +I+SG
Sbjct: 75 VEGTLDYVMVLGNGHVIDDDIPPTS-ELTRAALMRLTEGIRISRMY----PGSKLILSGY 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ + + L GV + DI L + DT++ A+ +++ ++ K ++LV+S
Sbjct: 130 AGGSE-VSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQ---KRMVLVTS 185
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP S TE E +G++
Sbjct: 186 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLEQTEQYWHETLGLMW 245
Query: 236 AYYR 239
R
Sbjct: 246 QTLR 249
>gi|17229959|ref|NP_486507.1| hypothetical protein alr2467 [Nostoc sp. PCC 7120]
gi|17131559|dbj|BAB74166.1| alr2467 [Nostoc sp. PCC 7120]
Length = 263
Score = 171 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 26/254 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + L+V+ L + ++ + L + L++ L++ P
Sbjct: 18 LASVGLVVALVTLRKRPRIATTAIALSLTLLLLCSNAWVAKYLVRSLEWQNLPMAQLP-- 75
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ I++LG T + P + R+ +LY+ K II+SGG
Sbjct: 76 --NAEAIIVLGGATKSV--FPPRITPDLSEQGDRVIYAAQLYRQNK----APLIILSGGR 127
Query: 122 -DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D + G +ES N L G+ + E SL+T+QNA ++ + ++LV+
Sbjct: 128 IDWRGSGSSESTDMANILTSLGIPASVLIEEPDSLNTYQNAVNVKKILVSRGIDQVLLVT 187
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL--------------NAYYSIIPLSANFYLTELA 226
SA H+ RS FQ G+N + +D+L A +++P + N +L A
Sbjct: 188 SALHMPRSLKIFQRQGMNVIPAPTDFLVSEGELQELGNTPKAAILNLLPDTYNLHLFTNA 247
Query: 227 LKEYIGILIAYYRG 240
LKEY+G + + RG
Sbjct: 248 LKEYVGSFVYWLRG 261
>gi|229014000|ref|ZP_04171124.1| hypothetical protein bmyco0001_44080 [Bacillus mycoides DSM 2048]
gi|229135650|ref|ZP_04264428.1| hypothetical protein bcere0014_45390 [Bacillus cereus BDRD-ST196]
gi|228647830|gb|EEL03887.1| hypothetical protein bcere0014_45390 [Bacillus cereus BDRD-ST196]
gi|228747256|gb|EEL97135.1| hypothetical protein bmyco0001_44080 [Bacillus mycoides DSM 2048]
Length = 257
Score = 171 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + + IF + ++ FI + L + + + RP
Sbjct: 20 ILFCILIPIINPASLFSEHFQFIFAAISLVTMYFFIH---LSNFLSAYFLYQFNRP---- 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 73 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 122
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 123 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYKSI 182
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 183 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 231
Query: 238 YR 239
+
Sbjct: 232 RK 233
>gi|161503883|ref|YP_001570995.1| hypothetical protein SARI_01972 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865230|gb|ABX21853.1| hypothetical protein SARI_01972 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 258
Score = 171 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 19/235 (8%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
W Q K+F +S L + + LL+ ++ SY + Q + IV+
Sbjct: 30 IWFSRFQKTGKVF-ISVGWLALLLLSLQPVADRLLRPIENSYP----TWQGPQKVEYIVV 84
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG G T P A S R+ E +RL+++ + +I +GG + + ++ +
Sbjct: 85 LGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRA----NPGAKLIFTGGVAKTNTVSTA 139
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
V GV R DI + DT + A I +LV+SA HL R+ ++
Sbjct: 140 EVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAI---GDTPFLLVTSASHLPRAMIF 196
Query: 192 FQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
FQH G+N + ++ LN + IP ++ A E +G + + +G
Sbjct: 197 FQHAGLNPLPAPANQLAIDSPLNPWEQAIPSPVWLMHSDRASYEALGRIWQWLKG 251
>gi|167840324|ref|ZP_02467008.1| Uncharacterized ACR, COG1434 family protein [Burkholderia
thailandensis MSMB43]
Length = 204
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 66/174 (37%), Positives = 106/174 (60%), Gaps = 4/174 (2%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH--SMHCTIIISGGDPQ 124
N IV+LG GT I A+ P SYSR+ E LY+ C++ + C +I+SGGD +
Sbjct: 17 NAIVMLGLGTEKIAATGAVE--PGTFSYSRVVEAASLYRDCRRARANADCKLIVSGGDAR 74
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++G+ E+ VY + L+ G++ D+ E +S++T+QNAQF+ +++ + ++LV+S H
Sbjct: 75 RNGVPEAAVYRDALIGLGIDAADVLSEPRSMNTWQNAQFTRAVLDGYRADRVLLVTSGIH 134
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
L+RS LYF HFG+ ++YL A +PL+ NF + +LAL EY+GI
Sbjct: 135 LRRSVLYFSHFGVAATPVRAEYLQAVTFPLPLAHNFSVADLALHEYLGIARYRL 188
>gi|253584074|ref|ZP_04861272.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251834646|gb|EES63209.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 252
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 17/246 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ IFL + ++L + I+ + + L L+ Y PL+S
Sbjct: 16 LPFILIFLYIGLKNILNRKIKFGIILILIGIGTYLGTSDFFIDRFLFKLESEY--PLIST 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D ++ +LLG G A P+ + +RI +T + Y + I +SG
Sbjct: 74 VKLRDADVYILLGGGII---PNSAGGNVPAEGANTRIMKTAQFYNKYPK-----KIYVSG 125
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P ++ +ES VY +L+ GV +DI +E +S +T +NA + M++ + K +L++
Sbjct: 126 GTPLQNKESESSVYKRELIGLGVPAEDIVIEEKSRNTKENAVYIKKMMEEAKEKKAVLIT 185
Query: 181 SAYHLKRSQLYFQH--FGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGI 233
SA+H+ RS F G+ + D++ ++ IP NF L LKEYIG+
Sbjct: 186 SAFHMPRSVKTFDKGEEGLIFYPAPCDFMAKSETENFFDYIPKYVNFKKLGLLLKEYIGM 245
Query: 234 LIAYYR 239
+ R
Sbjct: 246 VYYKIR 251
>gi|326942590|gb|AEA18486.1| hypothetical protein CT43_CH4827 [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 234
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 103/238 (43%), Gaps = 31/238 (13%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+ I++ L+ + IF + + FI + L + + + RP ++
Sbjct: 1 MLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP------RR 51
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+G P + SRI + + Y + TII SGG
Sbjct: 52 NQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSGGQGP 103
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVSS 181
GL E+ + +E G+ + E +S++T+QN FS ++ +++ + I ++
Sbjct: 104 DEGLPEAEAMQSYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSIFTTN 163
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+HL R+ +Y + G+N++ S +A +Y ++EY+ I++ +
Sbjct: 164 NFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMGRK 210
>gi|119485358|ref|ZP_01619686.1| hypothetical protein L8106_09461 [Lyngbya sp. PCC 8106]
gi|119457114|gb|EAW38240.1| hypothetical protein L8106_09461 [Lyngbya sp. PCC 8106]
Length = 263
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 61/241 (25%), Positives = 97/241 (40%), Gaps = 26/241 (10%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
Q ++ +L+ + L++ L++ P+ IV+LG G
Sbjct: 31 WKQPRWAAGAIALGLLVLLTSSNSGVSQSLVRSLEWQNIPNGELPK----ATAIVVLGGG 86
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG--LAESIV 133
T P ++ RI LYK K +I+SGG Q G ES
Sbjct: 87 TK--APTPPRPWVDVGEAGDRILYGALLYKQDK----APWLILSGGRIQWDGKEPPESAD 140
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYF 192
+E GV I + SL+T+QNA ++ ++LV+SA H+ RS L F
Sbjct: 141 MKEIAVEMGVRESAILQDPDSLNTYQNAVNVRQILAENNLTGKVLLVTSALHMPRSLLVF 200
Query: 193 QHFGINTKASCSDYLNAY-------------YSIIPLSANFYLTELALKEYIGILIAYYR 239
Q GI + +D+L + ++IP + + ALKEYIG+++ R
Sbjct: 201 QRQGIEVIPAPTDFLVSQQDLQPSTTIQGRILNLIPDTQSLQQFTQALKEYIGMIVYRLR 260
Query: 240 G 240
G
Sbjct: 261 G 261
>gi|308274760|emb|CBX31359.1| hypothetical protein N47_E48710 [uncultured Desulfobacterium sp.]
Length = 254
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 18/249 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF--FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+ + +FL+ + LL + K+ + ++ FI + I P +L +L+ YQ PL+
Sbjct: 15 LTVCILFLVCGVFFLLLKKKEKMSKSIIVFGVISLVFISFNIFPDKILGYLEHKYQ-PLI 73
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ D IV+LG G + I + S R+ E + ++ + II
Sbjct: 74 HIKLISDARWIVVLGGGCKGDLMLDPIS-RLTSDSLFRVVEGISIHNKIPES----KIIF 128
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG ++ES + L GV +D I E++ DT A ++ IL
Sbjct: 129 SGGSVFST-ISESEAMADVALALGVNKDKIVEESEGPDTEAQALLIKKIV---GNDKFIL 184
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIG 232
V+SA+H+ RS F G++ A+ + YL P SA ELA+ EY+G
Sbjct: 185 VTSAFHMPRSMAVFNKAGMHPIAAPAGYLVKKRKNINLLLFFPKSAEIKKMELAVHEYLG 244
Query: 233 ILIAYYRGN 241
+ A RG
Sbjct: 245 LFWAKIRGR 253
>gi|304309671|ref|YP_003809269.1| hypothetical protein HDN1F_00190 [gamma proteobacterium HdN1]
gi|301795404|emb|CBL43602.1| conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 256
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 55/248 (22%), Positives = 114/248 (45%), Gaps = 18/248 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++++ + +V + + F+ +L+F+ ++ L K L+ Y P+L P
Sbjct: 17 VIVALVLALVLFCWGRVRGAALSVFLGLVVLVFA--SMPLVAVGLWKSLEGRY--PILVP 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++IV+LG G + P + + R++ LY + K +++SG
Sbjct: 73 SEQPKADVIVVLGGGIAL--PEPPQVVPDLNDAADRVWYAAELYHAGK----APWVVVSG 126
Query: 121 GD--PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G P+ +E+ + L GV + I +E+ S DT NA ++++++ + + +L
Sbjct: 127 GQVFPRSGLESEAEYHRKLLERMGVPAEAILVESASRDTAGNAMLTAALMRERKFQKALL 186
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYIG 232
V+SA H+ R+ L F+H G++ + D ++P++ F TE AL E++
Sbjct: 187 VTSAAHMPRAVLLFEHAGVDVVPASCDVHGVDMDVPLILKLLPVAWAFQDTERALHEWLA 246
Query: 233 ILIAYYRG 240
+ Y
Sbjct: 247 FVYYRYFA 254
>gi|76811194|ref|YP_333307.1| hypothetical protein BURPS1710b_1908 [Burkholderia pseudomallei
1710b]
gi|126441655|ref|YP_001058770.1| hypothetical protein BURPS668_1731 [Burkholderia pseudomallei 668]
gi|167738833|ref|ZP_02411607.1| hypothetical protein Bpse14_12248 [Burkholderia pseudomallei 14]
gi|167911178|ref|ZP_02498269.1| hypothetical protein Bpse112_11843 [Burkholderia pseudomallei 112]
gi|167919203|ref|ZP_02506294.1| hypothetical protein BpseBC_11665 [Burkholderia pseudomallei
BCC215]
gi|217423472|ref|ZP_03454973.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|254259791|ref|ZP_04950845.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
gi|76580647|gb|ABA50122.1| conserved hypothetical protein [Burkholderia pseudomallei 1710b]
gi|126221148|gb|ABN84654.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
gi|217393330|gb|EEC33351.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|254218480|gb|EET07864.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
Length = 240
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 72/246 (29%), Positives = 123/246 (50%), Gaps = 14/246 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI---GWGIIPTILLKHLQFSYQRPL 57
M+L F ++ LLC+ R F + ++ GW P + L P+
Sbjct: 1 MILFNSFGLLFVVFLLCRKRRGAFAILAAGAALLWLIASGWLAAPLVALAQAGMQ---PV 57
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P D +IV+LG G + P + +RI +T LY +C++ ++ CT++
Sbjct: 58 AHPTMTGD-TVIVMLGAGIERRDGV----AIPPRDALARIDKTAELYSACRRTALRCTVV 112
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGGDPQ G+AE+ Y LL GV D+ E +S T++NA+F++ +++ ++I
Sbjct: 113 VSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLI 172
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL--- 234
LV+S+Y +KR+ L F+ FG + ++ +A +P +AN ELAL E +G+
Sbjct: 173 LVTSSYQMKRALLDFERFGFAPQPVYANRRDARLGWLPRAANLANAELALHEIVGVAQFH 232
Query: 235 IAYYRG 240
+ G
Sbjct: 233 VYRRLG 238
>gi|228961075|ref|ZP_04122702.1| hypothetical protein bthur0005_45260 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228798620|gb|EEM45606.1| hypothetical protein bthur0005_45260 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 345
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 319
Query: 238 YR 239
+
Sbjct: 320 RK 321
>gi|53724817|ref|YP_102769.1| hypothetical protein BMA1073 [Burkholderia mallei ATCC 23344]
gi|67641348|ref|ZP_00440128.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
gi|121599410|ref|YP_992846.1| hypothetical protein BMASAVP1_A1516 [Burkholderia mallei SAVP1]
gi|124385403|ref|YP_001026188.1| hypothetical protein BMA10229_A0183 [Burkholderia mallei NCTC
10229]
gi|134282282|ref|ZP_01768987.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|167003067|ref|ZP_02268857.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
gi|167719831|ref|ZP_02403067.1| hypothetical protein BpseD_12495 [Burkholderia pseudomallei DM98]
gi|254178040|ref|ZP_04884695.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|254188599|ref|ZP_04895110.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|254199716|ref|ZP_04906082.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|254206038|ref|ZP_04912390.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|254358413|ref|ZP_04974686.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|52428240|gb|AAU48833.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|121228220|gb|ABM50738.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|124293423|gb|ABN02692.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
gi|134246320|gb|EBA46409.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|147749312|gb|EDK56386.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|147753481|gb|EDK60546.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|148027540|gb|EDK85561.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|157936278|gb|EDO91948.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|160699079|gb|EDP89049.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|238522267|gb|EEP85712.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
gi|243061318|gb|EES43504.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
Length = 240
Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats.
Identities = 72/246 (29%), Positives = 122/246 (49%), Gaps = 14/246 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI---GWGIIPTILLKHLQFSYQRPL 57
M+L F ++ LLC+ R F + ++ GW P + L P+
Sbjct: 1 MILFNSFGLLFVVFLLCRKRRGAFAILAAGAALLWLIASGWLAAPLVALAQAGMQ---PV 57
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P D +IV+LG G + P + +RI +T LY +C++ + CT++
Sbjct: 58 AHPTMTGD-TVIVMLGAGIERRDGV----AIPPRDALARIDKTAELYSACRRTAQRCTVV 112
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGGDPQ G+AE+ Y LL GV D+ E +S T++NA+F++ +++ ++I
Sbjct: 113 VSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLI 172
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL--- 234
LV+S+Y +KR+ L F+ FG + ++ +A +P +AN ELAL E +G+
Sbjct: 173 LVTSSYQMKRALLDFERFGFAPQPVYANRRDARLGWLPRAANLANAELALHEIVGVAQFH 232
Query: 235 IAYYRG 240
+ G
Sbjct: 233 VYRRLG 238
>gi|330816685|ref|YP_004360390.1| hypothetical protein bgla_1g17890 [Burkholderia gladioli BSR3]
gi|327369078|gb|AEA60434.1| hypothetical protein bgla_1g17890 [Burkholderia gladioli BSR3]
Length = 238
Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats.
Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 10/241 (4%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L L+ L + I +LL GW P + L P+ +P
Sbjct: 2 ILFDSFVLLFVAAALWRKRRFAIAATGLALLLAIGTGWLAAPLVALAEAGVE---PVEAP 58
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IVLLG G + P + SRI L+ C+ + C I+++G
Sbjct: 59 TMRGH-TAIVLLGGGI----ERRRGELVPPHDALSRIVRAAELHSVCQAIASQCDIVVTG 113
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GDP HG++E+ +Y L E GV D+ LET+S T++NA++++ ++ ILV+
Sbjct: 114 GDPHHHGISEAQLYAPLLREHGVAERDLILETRSRTTYENAKYTAPILLAQHYDATILVT 173
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL--IAYY 238
S+Y ++R+ L F F I + ++ L P+ NF AL E GI+ AY
Sbjct: 174 SSYQMRRALLDFARFDIEPQPVYANQLRPILGWRPVWHNFVAASRALHEIAGIMQFYAYR 233
Query: 239 R 239
R
Sbjct: 234 R 234
>gi|121727926|ref|ZP_01680974.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147675084|ref|YP_001217265.1| hypothetical protein VC0395_A1321 [Vibrio cholerae O395]
gi|121629776|gb|EAX62192.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|146316967|gb|ABQ21506.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227013622|gb|ACP09832.1| conserved hypothetical protein [Vibrio cholerae O395]
Length = 282
Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats.
Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 23/244 (9%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQ 61
LI+ + L+ C ++LFS G + + T LL L+ +Y L
Sbjct: 27 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL---P 83
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +++LGNG I IP E + + R+ E +R+ + +I+SG
Sbjct: 84 VEGTLDYVMVLGNGHVIDDDIPPTS-ELTRAALMRLTEGIRISRMY----PGSKLILSGY 138
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ + + L GV + DI L + DT++ A+ +++ ++ K ++LV+S
Sbjct: 139 AGGSE-VSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQ---KRMVLVTS 194
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP S TE E +G++
Sbjct: 195 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLEQTEQYWHETLGLMW 254
Query: 236 AYYR 239
R
Sbjct: 255 QTLR 258
>gi|15641722|ref|NP_231354.1| hypothetical protein VC1718 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121585785|ref|ZP_01675579.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|153212106|ref|ZP_01947923.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|153817128|ref|ZP_01969795.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153823662|ref|ZP_01976329.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|153825454|ref|ZP_01978121.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|153827934|ref|ZP_01980601.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|227081867|ref|YP_002810418.1| hypothetical protein VCM66_1658 [Vibrio cholerae M66-2]
gi|229508174|ref|ZP_04397679.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae BX 330286]
gi|229511588|ref|ZP_04401067.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae B33]
gi|229515111|ref|ZP_04404571.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae TMA 21]
gi|229518727|ref|ZP_04408170.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae RC9]
gi|229520681|ref|ZP_04410104.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae TM 11079-80]
gi|229607747|ref|YP_002878395.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae MJ-1236]
gi|254224867|ref|ZP_04918482.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|254285337|ref|ZP_04960302.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|254848836|ref|ZP_05238186.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297579300|ref|ZP_06941228.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|298498204|ref|ZP_07008011.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9656238|gb|AAF94868.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549923|gb|EAX59941.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|124116902|gb|EAY35722.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|125622555|gb|EAZ50874.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|126512277|gb|EAZ74871.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126518811|gb|EAZ76034.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|148876515|gb|EDL74650.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|149740866|gb|EDM54951.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|150424609|gb|EDN16545.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|227009755|gb|ACP05967.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|229342236|gb|EEO07231.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae TM 11079-80]
gi|229343416|gb|EEO08391.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae RC9]
gi|229347816|gb|EEO12775.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae TMA 21]
gi|229351553|gb|EEO16494.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae B33]
gi|229355679|gb|EEO20600.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae BX 330286]
gi|229370402|gb|ACQ60825.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae MJ-1236]
gi|254844541|gb|EET22955.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297536894|gb|EFH75727.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297542537|gb|EFH78587.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 282
Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats.
Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 23/244 (9%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQ 61
LI+ + L+ C ++LFS G + + T LL L+ +Y L
Sbjct: 27 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL---P 83
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +++LGNG I IP E + + R+ E +R+ + +I+SG
Sbjct: 84 VEGTLDYVMVLGNGHVIDDDIPPTS-ELTRAALMRLTEGIRISRMY----PGSKLILSGY 138
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ + + L GV + DI L + DT++ A+ +++ ++ K ++LV+S
Sbjct: 139 AGGSE-VSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQ---KRMVLVTS 194
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP S TE E +G++
Sbjct: 195 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLEQTEQYWHETLGLMW 254
Query: 236 AYYR 239
R
Sbjct: 255 QTLR 258
>gi|229529254|ref|ZP_04418644.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio cholerae 12129(1)]
gi|229333028|gb|EEN98514.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio cholerae 12129(1)]
Length = 282
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 23/244 (9%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQ 61
LI+ + L+ C ++LFS G + + T LL L+ +Y L
Sbjct: 27 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL---P 83
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +++LGNG I IP E + + R+ E +R+ + +I+SG
Sbjct: 84 VEGTLDYVMVLGNGHVIDDDIPPTS-ELTRAALMRLTEGIRISRMY----PGSKLILSGY 138
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ + + L GV + DI L + DT++ A+ +++ ++ K ++LV+S
Sbjct: 139 AGGSE-VSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQ---KRMVLVTS 194
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP S TE E +G++
Sbjct: 195 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLEQTEQYWHETLGLMW 254
Query: 236 AYYR 239
R
Sbjct: 255 QTLR 258
>gi|229099276|ref|ZP_04230207.1| hypothetical protein bcere0020_44960 [Bacillus cereus Rock3-29]
gi|228684094|gb|EEL38041.1| hypothetical protein bcere0020_44960 [Bacillus cereus Rock3-29]
Length = 277
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 53/242 (21%), Positives = 103/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 40 MLFFMLLPIINPASLVSSHLEPIFAGISLISVYFFIH---LSNFLSAYFLYQFNRP---- 92
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 93 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 142
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ K I
Sbjct: 143 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMASLKPEGKYRSI 202
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 203 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 251
Query: 238 YR 239
+
Sbjct: 252 RK 253
>gi|229169539|ref|ZP_04297243.1| hypothetical protein bcere0007_44860 [Bacillus cereus AH621]
gi|228613929|gb|EEK71050.1| hypothetical protein bcere0007_44860 [Bacillus cereus AH621]
Length = 277
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + IF + ++ FI + L + + + RP
Sbjct: 40 ILFLIMLSIINPASLFSAHFQFIFAAISLITMYFFIH---LSNFLSAYFLYQFNRP---- 92
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 93 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQSAVNTPPTIIFSG 142
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 143 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYKSI 202
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 203 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 251
Query: 238 YR 239
+
Sbjct: 252 RK 253
>gi|158335605|ref|YP_001516777.1| hypothetical protein AM1_2455 [Acaryochloris marina MBIC11017]
gi|158305846|gb|ABW27463.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 261
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 63/252 (25%), Positives = 108/252 (42%), Gaps = 24/252 (9%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
LS + L+V+ + + + + F G + LL L+ Y +
Sbjct: 18 LSTVLLLVAIATFWKRPKVAAISVGLALGILFFSANGWVGDGLLYSLEHQYP----PLKQ 73
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG G T P +E S ++ R+ +LY+ K ++++GG
Sbjct: 74 DATADAIVVLG-GCTRSAHPPRPWVEVS-EAGDRVLYAAKLYREGK----APKVVLAGGR 127
Query: 123 --PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILV 179
+ G AE++ L GV + LE SL+TF+NA ++K ++LV
Sbjct: 128 IYWKGGGQAEALDMAELLKIMGVPESALLLEPDSLNTFENATNVKRVLKQNNIDGPLLLV 187
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDY-----------LNAYYSIIPLSANFYLTELALK 228
+SA+H+ RS F+ G++ A+ +DY L ++P T +A K
Sbjct: 188 TSAFHMPRSMAIFETQGLSVIAAPTDYQVTEVNENAGFLGFVLRLLPDIEALVNTTIAFK 247
Query: 229 EYIGILIAYYRG 240
E+IG L+ RG
Sbjct: 248 EWIGFLMYRLRG 259
>gi|254228980|ref|ZP_04922401.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262394709|ref|YP_003286563.1| membrane protein [Vibrio sp. Ex25]
gi|151938448|gb|EDN57285.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262338303|gb|ACY52098.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio sp. Ex25]
Length = 261
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 23/224 (10%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
CF++LFSF+G + + T LL L+ ++ L + +++LGNG I
Sbjct: 38 GCFVVLFSFVGIFLVAFQPVSTKLLMPLEREHKAFLPVS---GTIDYVMVLGNGHVIDDE 94
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
IP + S + R+ E +R+ + +I+SG ++ + + N L
Sbjct: 95 IPPTS-QLSRAALMRLTEGIRILRMY----PGAKLILSGYAGGSE-ISHARMMANVALAL 148
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + DI L + DT++ A+ +++ ++ K I+LV+SA H+ R+ F GI
Sbjct: 149 GVAKSDIILLEDAKDTWEEARQAAAFVQQ---KEIVLVTSASHMSRALYEFNAAGIKPIP 205
Query: 202 SCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +++L + P + TEL EY+G + R
Sbjct: 206 APTNFLAISEISQPWDKYSPKARYLEQTELYWHEYLGSIWQRLR 249
>gi|237812033|ref|YP_002896484.1| hypothetical protein GBP346_A1775 [Burkholderia pseudomallei
MSHR346]
gi|237506357|gb|ACQ98675.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
Length = 240
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 72/246 (29%), Positives = 122/246 (49%), Gaps = 14/246 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI---GWGIIPTILLKHLQFSYQRPL 57
M+L F ++ LLC+ R F + ++ GW P + L P+
Sbjct: 1 MILFNSFGLLFVVFLLCRKRRGAFAILAAGAALLWLIASGWLAAPLVALAQAGMQ---PV 57
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P D +IV+LG G + P + +RI +T LY +C++ + CT++
Sbjct: 58 AHPTMTGD-TVIVMLGAGIERRDGV----AIPPRDALARIDKTAELYSACRRTAQRCTVV 112
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGGDPQ G+AE+ Y LL GV D+ E +S T++NA+F++ +++ ++I
Sbjct: 113 VSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLI 172
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL--- 234
LV+S+Y +KR+ L F+ FG + ++ +A +P +AN ELAL E +G+
Sbjct: 173 LVTSSYQMKRALLDFERFGFAPQPVYANRRDARPGWLPRAANLANAELALHEIVGVAQFH 232
Query: 235 IAYYRG 240
+ G
Sbjct: 233 VYRRLG 238
>gi|269967671|ref|ZP_06181721.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269827758|gb|EEZ82042.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 261
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 23/224 (10%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
CF++LFSF+G + + T LL L+ ++ L + +++LGNG I
Sbjct: 38 GCFVVLFSFVGIFLVAFQPVSTKLLMPLEREHKAFLPVS---GTIDYVMVLGNGHVIDDE 94
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
IP + S + R+ E +R+ + +I+SG ++ + + N L
Sbjct: 95 IPPTS-QLSRAALMRLTEGIRILRMY----PGAKLILSGYAGGSE-ISHARMMANVALAL 148
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + DI L + DT++ A+ +++ ++ K I+LV+SA H+ R+ F GI
Sbjct: 149 GVAKSDIILLEDAKDTWEEARQAAAFVQQ---KEIVLVTSASHMSRALYEFNAAGIKPIP 205
Query: 202 SCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +++L + P + TEL EY+G + R
Sbjct: 206 APTNFLAISEISQPWDKYSPKARYLEQTELYWHEYLGSIWQRLR 249
>gi|53719541|ref|YP_108527.1| hypothetical protein BPSL1927 [Burkholderia pseudomallei K96243]
gi|126452373|ref|YP_001066022.1| hypothetical protein BURPS1106A_1753 [Burkholderia pseudomallei
1106a]
gi|167816053|ref|ZP_02447733.1| hypothetical protein Bpse9_12987 [Burkholderia pseudomallei 91]
gi|167824429|ref|ZP_02455900.1| hypothetical protein Bpseu9_12213 [Burkholderia pseudomallei 9]
gi|167845961|ref|ZP_02471469.1| hypothetical protein BpseB_11780 [Burkholderia pseudomallei B7210]
gi|226199704|ref|ZP_03795257.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242315371|ref|ZP_04814387.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|254179990|ref|ZP_04886589.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|254297823|ref|ZP_04965276.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|52209955|emb|CAH35927.1| putative exported protein [Burkholderia pseudomallei K96243]
gi|126226015|gb|ABN89555.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
gi|157807296|gb|EDO84466.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|184210530|gb|EDU07573.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|225928290|gb|EEH24324.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|242138610|gb|EES25012.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
Length = 240
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 72/246 (29%), Positives = 122/246 (49%), Gaps = 14/246 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI---GWGIIPTILLKHLQFSYQRPL 57
M+L F ++ LLC+ R F + ++ GW P + L P+
Sbjct: 1 MILFNSFGLLFVVFLLCRKPRGAFAILAAGAALLWLIASGWLAAPLVALAQAGMQ---PV 57
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P D +IV+LG G + P + +RI +T LY +C++ + CT++
Sbjct: 58 AHPTMTGD-TVIVMLGAGIERRDGV----AIPPRDALARIDKTAELYSACRRTAQRCTVV 112
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGGDPQ G+AE+ Y LL GV D+ E +S T++NA+F++ +++ ++I
Sbjct: 113 VSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLI 172
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL--- 234
LV+S+Y +KR+ L F+ FG + ++ +A +P +AN ELAL E +G+
Sbjct: 173 LVTSSYQMKRALLDFERFGFAPQPVYANRRDARLGWLPRAANLANAELALHEIVGVAQFH 232
Query: 235 IAYYRG 240
+ G
Sbjct: 233 VYRRLG 238
>gi|254245595|ref|ZP_04938916.1| hypothetical protein BCPG_00305 [Burkholderia cenocepacia PC184]
gi|124870371|gb|EAY62087.1| hypothetical protein BCPG_00305 [Burkholderia cenocepacia PC184]
Length = 179
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 57/174 (32%), Positives = 97/174 (55%), Gaps = 7/174 (4%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
+L+G GT T +P +RI + LY++C+Q + CT+++SGGDPQ HG
Sbjct: 8 ILIGAGTHRTDT----GAQPPPDGVARIHKVAALYRTCRQQAERCTVVMSGGDPQHHGDT 63
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E+ VY +L+ GV D+ LE S T++NA+F++S++++ +LV+S+Y ++R+
Sbjct: 64 EAAVYGRQLVAQGVAPADLVLEPNSRTTYENAKFTASILRSQYDDARVLVTSSYQMRRAL 123
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL---IAYYRG 240
L F+ FGI+ + ++ A +P N E AL E +GI + + G
Sbjct: 124 LDFRRFGIDPQPVYANLRRAQTGWLPRWRNVANAEQALHELVGIAQFHVYRWLG 177
>gi|229048503|ref|ZP_04194066.1| hypothetical protein bcere0027_44660 [Bacillus cereus AH676]
gi|229112264|ref|ZP_04241804.1| hypothetical protein bcere0018_45060 [Bacillus cereus Rock1-15]
gi|229147372|ref|ZP_04275721.1| hypothetical protein bcere0012_45020 [Bacillus cereus BDRD-ST24]
gi|296505264|ref|YP_003666964.1| hypothetical protein BMB171_C4436 [Bacillus thuringiensis BMB171]
gi|228636054|gb|EEK92535.1| hypothetical protein bcere0012_45020 [Bacillus cereus BDRD-ST24]
gi|228671248|gb|EEL26552.1| hypothetical protein bcere0018_45060 [Bacillus cereus Rock1-15]
gi|228722868|gb|EEL74250.1| hypothetical protein bcere0027_44660 [Bacillus cereus AH676]
gi|296326316|gb|ADH09244.1| hypothetical protein BMB171_C4436 [Bacillus thuringiensis BMB171]
Length = 345
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAAISLISIYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ + +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 211 GQGPDEGLPEAEAMQSYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 319
Query: 238 YR 239
+
Sbjct: 320 RK 321
>gi|288817420|ref|YP_003431767.1| hypothetical protein HTH_0099 [Hydrogenobacter thermophilus TK-6]
gi|288786819|dbj|BAI68566.1| conserved hypothetical protein [Hydrogenobacter thermophilus TK-6]
gi|308751027|gb|ADO44510.1| protein of unknown function DUF218 [Hydrogenobacter thermophilus
TK-6]
Length = 240
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 25/243 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSC-FMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ L + + R ++ S LL + + LL L+ Y P
Sbjct: 13 LPPGLFVLALLLISFFERKKRLTYYTSVSLALLIYMLSIEPVKDTLLTPLESKYSVPE-- 70
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K + IV+LG G+ S R+ + L+K I++S
Sbjct: 71 ---KFQADAIVVLGGGSYST-------GILKEDSMKRLLTALILHKR-----TGLPIVLS 115
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG L ++ + + L+E GV++ DI E +S DT +NA + + + K+++LV
Sbjct: 116 GGA---ENLPDAEIMKSLLVELGVDKRDIITEVRSRDTEENASYVREICQQRNYKSVVLV 172
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILI 235
+SAYHL R+ F+ G++ +D+ YS++P + + AL+EY+ +L
Sbjct: 173 TSAYHLPRAVFLFKKEGLSVIPYPTDFKRDLRYNLYSLLPKMSVLNDSVKALREYVALLS 232
Query: 236 AYY 238
Sbjct: 233 LRL 235
>gi|91228201|ref|ZP_01262183.1| hypothetical protein V12G01_20638 [Vibrio alginolyticus 12G01]
gi|91188190|gb|EAS74491.1| hypothetical protein V12G01_20638 [Vibrio alginolyticus 12G01]
Length = 261
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 23/224 (10%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
CF++LFSF+G + + T LL L+ ++ L + +++LGNG I
Sbjct: 38 GCFVVLFSFVGIFLVAFQPVSTKLLMPLEREHKAFLPVS---GTIDYVMVLGNGHVIDDE 94
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
IP + S + R+ E +R+ + +I+SG ++ + + N L
Sbjct: 95 IPPTS-QLSRAALMRLTEGIRILRMY----PGAKLILSGYAGGSE-ISHARMMANVALAL 148
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + DI L + DT++ A+ +++ ++ K I+LV+SA H+ R+ F GI
Sbjct: 149 GVAKSDIILLEDAKDTWEEARQAAAFVQQ---KEIVLVTSASHMSRALYEFNAAGIKPIP 205
Query: 202 SCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +++L + P + TEL EY+G + R
Sbjct: 206 APTNFLAIREISQPWDKYSPKARYLEQTELYWHEYLGSIWQRLR 249
>gi|167629577|ref|YP_001680076.1| hypothetical protein HM1_1492 [Heliobacterium modesticaldum Ice1]
gi|167592317|gb|ABZ84065.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
Length = 252
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 52/226 (23%), Positives = 98/226 (43%), Gaps = 16/226 (7%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ F + LL + +++ L+ Y P K G++I++LG G T+
Sbjct: 37 LGPARFSTAMALLLYLFSISAVGETMIRSLENRYL-----PPDKPSGDVIIMLGGGATMD 91
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ + S +R+ RL++ II+S G ++ ES + +L
Sbjct: 92 TPDIDGLGQMTGGSANRLLTAARLHQ-----LTGAPIIVSAGQVFENSGNESRIAFRQLT 146
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I +E S +T +NA+++ ++ ILV+SA+H++RS +F G++T
Sbjct: 147 GLGVPESMIIVEEMSRNTEENARYTKEILDARGFHKPILVTSAFHMERSVGHFSKLGVST 206
Query: 200 KASCSDYLNAYY------SIIPLSANFYLTELALKEYIGILIAYYR 239
+DY P + LA+KEY+G++ + +
Sbjct: 207 LPFPTDYRVNRQARYSLNDWAPSAVAMSNASLAMKEYLGLIPLWLK 252
>gi|218906031|ref|YP_002453865.1| hypothetical protein BCAH820_4919 [Bacillus cereus AH820]
gi|218540175|gb|ACK92573.1| conserved domain protein [Bacillus cereus AH820]
Length = 344
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 107 MLFCMLLPIINPASLVSSHFQPIFAGISLISVYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 210 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPDGKYKSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 318
Query: 238 YR 239
+
Sbjct: 319 RK 320
>gi|331656991|ref|ZP_08357953.1| putative KicA protein [Escherichia coli TA206]
gi|331055239|gb|EGI27248.1| putative KicA protein [Escherichia coli TA206]
Length = 270
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 54/241 (22%), Positives = 96/241 (39%), Gaps = 23/241 (9%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK--KDG 66
+ W Q KIF +S L + + LL+ ++ +Y P W +
Sbjct: 38 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTY------PTWNNSQKV 90
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G T P A S R+ E +RL++ + +I +GG + +
Sbjct: 91 DYIVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTN 145
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
++ + V GV + I DT + A I +LV+SA HL
Sbjct: 146 TVSTAEVGARVAQSLGVPCEQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLP 202
Query: 187 RSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ ++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 203 RAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 262
Query: 241 N 241
+
Sbjct: 263 S 263
>gi|300865598|ref|ZP_07110374.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300336399|emb|CBN55524.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 236
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 63/243 (25%), Positives = 100/243 (41%), Gaps = 27/243 (11%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ M+ + + + G I L++ L+ P PQ + IV+LG
Sbjct: 2 FWKRPRWAAGAMALALTILLTLSNGWIAQNLVRSLETQNLPPTPIPQTR----AIVVLGG 57
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESI 132
G P +P ++ RI +LY+ K +I+SGG + G ES
Sbjct: 58 GIK--PALPPRPWVEVGEAGDRILYGSQLYRQGK----APWLILSGGRVEWKGGGPPESA 111
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHLKRSQLY 191
GV I + SL+T+QNA ++K+ I+LV+SA H+ RS L
Sbjct: 112 DMAEIAQAMGVPTSAILQDPTSLNTYQNAVNVRKILKDNNILGPILLVTSALHMPRSLLI 171
Query: 192 FQHFGINTKASCSD--------------YLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
FQ GI T + +D + +++P + N + ALKEYIG+ +
Sbjct: 172 FQRQGIETIPAPTDFSITQQDMEASQSSFQAVLLNLLPDAYNLQQSTKALKEYIGLAVYR 231
Query: 238 YRG 240
RG
Sbjct: 232 LRG 234
>gi|110633611|ref|YP_673819.1| hypothetical protein Meso_1258 [Mesorhizobium sp. BNC1]
gi|110284595|gb|ABG62654.1| protein of unknown function DUF218 [Chelativorans sp. BNC1]
Length = 268
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 61/244 (25%), Positives = 110/244 (45%), Gaps = 16/244 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ ++ L+ L + + F+ +L + IGW + + L L+ + RP +S
Sbjct: 21 LVGFVALLGLVLLLFRRKVAGTLFVGTAAILLAVIGWSPLGSAALLALENRFPRPAISGP 80
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
IV+LG G + + R+ +T + + I++SGG
Sbjct: 81 IAG----IVVLG-GEIDTDVSAERKTIALTDAAERLTKTAEFNRLY----PNARILLSGG 131
Query: 122 DPQ---KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
H E+ + L++ GV D I+LE +S +T +NA S ++ G+ +L
Sbjct: 132 INDLLITHDRTEAALARELLVKIGVPADRIELEERSRNTCENAIESKAVAAPKPGETWLL 191
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYL---NAYYSIIPL-SANFYLTELALKEYIGIL 234
V+SA+H+ R+ F+ G DYL +A S+ P +A YLT++A E++G+
Sbjct: 192 VTSAFHMPRAVGCFRAAGFPVLPYPVDYLARRSALSSLAPSVAAGLYLTDIAAHEWLGLA 251
Query: 235 IAYY 238
Y+
Sbjct: 252 AYYF 255
>gi|260779195|ref|ZP_05888087.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605359|gb|EEX31654.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio coralliilyticus ATCC
BAA-450]
Length = 267
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 58/250 (23%), Positives = 109/250 (43%), Gaps = 24/250 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQR 55
M L + LI+ + L+ + CF++LFSFIG + + + LL L+ Y
Sbjct: 13 MPLPAM-LIIGFLGLMLIMFTRKQKTGCFVVLFSFIGIFLIAFQPVSSRLLMPLERQYSA 71
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
+ + +++LG+G + IP E S R+ E +R+ +
Sbjct: 72 FF---PVDETIDYVMVLGSGHVVDDKIPPTS-ELSRTGLMRLAEGIRIMRIY----PGSK 123
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SG ++ + + L GV + DI L + DT++ A+ +++ +K K
Sbjct: 124 LILSGYAGGSE-VSNARMMAKVALALGVSKSDIILLETAKDTWEEARQAAAFVKR---KK 179
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKE 229
+++V+SA H+KR+ F G+ + ++YL A+ P + TE E
Sbjct: 180 LVVVTSASHMKRALNEFHSAGLKPYPAPTNYLAHDKVTQAWAKYAPKAVYLEQTERYWHE 239
Query: 230 YIGILIAYYR 239
+G + R
Sbjct: 240 TLGRIWQSLR 249
>gi|323142298|ref|ZP_08077130.1| hypothetical protein HMPREF9443_01929 [Phascolarctobacterium sp.
YIT 12067]
gi|322413182|gb|EFY04069.1| hypothetical protein HMPREF9443_01929 [Phascolarctobacterium sp.
YIT 12067]
Length = 258
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 21/248 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSP 60
+L I L V W R F +S F+ L + ++ LL + L+ Y +
Sbjct: 19 VLLGIILSVYLWRRRQNIGRFAFSLSAFLTLLLYFSSTLLGAKLLGQPLENRYIQ----- 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q +IV+LG G+ R +R+ RL K ++ISG
Sbjct: 74 QQPDAAQVIVVLGGGSVGSAPDGTERGGLMSAGAARLLTAARLAKQH-----SLPVLISG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + G++E++V LL+ G+ ++ I +ETQ+ T +NA +++ + ++++L++
Sbjct: 129 GQVFRDGVSEALVAERILLQLGLPQEQIIVETQARTTKENAAYTAMHCRERGYQSVLLLT 188
Query: 181 SAYHLKRSQLYFQH----FGINTKASCSDY-LNAYYSIIPLS-----ANFYLTELALKEY 230
SA H+ RS +F+ G+ A DY LN P F +T +AL EY
Sbjct: 189 SALHMPRSMQFFERYLGEQGVKVAAYPCDYTLNPQGKFNPRWLVPQLQAFDVTCMALHEY 248
Query: 231 IGILIAYY 238
+G+ A+
Sbjct: 249 VGMAGAFL 256
>gi|229118290|ref|ZP_04247646.1| hypothetical protein bcere0017_45590 [Bacillus cereus Rock1-3]
gi|228665120|gb|EEL20606.1| hypothetical protein bcere0017_45590 [Bacillus cereus Rock1-3]
Length = 345
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAGISLISVYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 319
Query: 238 YR 239
+
Sbjct: 320 RK 321
>gi|152977155|ref|YP_001376672.1| hypothetical protein Bcer98_3467 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152025907|gb|ABS23677.1| protein of unknown function DUF218 [Bacillus cytotoxicus NVH
391-98]
Length = 345
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 31/239 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LL + I L + IF ++L+ FI + +L + + RP
Sbjct: 108 ILLWILLAIFDPASLFSSHFQPIFGAISLIILYFFIH---VLNFFTAYLLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K + + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --KYNQDFIIVLGSGLIRDKVPPLL--------ASRIHKAIDFYHKQAAVASPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G L E+ +E G+ + E +S++T+QN FS ++ +++ N I
Sbjct: 211 GQGPDENLPEAEAMQKYAVEQGIPIEHTVQENRSVNTYQNMLFSKQIMDSLKPDGNYNSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++ +HL R+ LY + G+N++ S +A +Y ++EYI I++
Sbjct: 271 FATNNFHLFRAGLYAKQAGLNSQGIGS-----------KTAFYYWPNALIREYIAIVVM 318
>gi|218557825|ref|YP_002390738.1| hypothetical protein ECS88_0948 [Escherichia coli S88]
gi|218364594|emb|CAR02280.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli S88]
Length = 259
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 19/239 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V V R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLDVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++FQ G+N + ++ LN + IP ++ E +G + + +G+
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|262165878|ref|ZP_06033615.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio mimicus VM223]
gi|262025594|gb|EEY44262.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio mimicus VM223]
Length = 278
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 23/244 (9%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQ 61
LI+ + L+ C ++LFS G + + T LL L+ +Y L
Sbjct: 18 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL---P 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +++LG+G + IP E S + R+ E +R+ + M I+SG
Sbjct: 75 VEGSIDYVMILGSGHVVDDDIPPTS-ELSRAALMRLTEGIRISRMYPGSKM----ILSGY 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ + + L GV + DI L + DT++ A+ +++ ++ K ++LV+S
Sbjct: 130 AGGSE-FSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQQ---KRMVLVTS 185
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP + TE E +G+L
Sbjct: 186 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIAQPWDKYIPKARYLEQTEQYWYETLGLLW 245
Query: 236 AYYR 239
R
Sbjct: 246 QKLR 249
>gi|49481369|ref|YP_038846.1| hypothetical protein BT9727_4534 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49332925|gb|AAT63571.1| conserved hypothetical protein, possible membrane spanning protein
[Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 344
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 107 MLFCMLLPIINPASLVSSHFQPIFAGISLISVYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 210 GQGPDEGLPEAEAMQKYAVEKGIPIEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 318
Query: 238 YR 239
+
Sbjct: 319 RK 320
>gi|218231692|ref|YP_002369609.1| hypothetical protein BCB4264_A4924 [Bacillus cereus B4264]
gi|218159649|gb|ACK59641.1| conserved domain protein [Bacillus cereus B4264]
Length = 345
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L+ + IF + + FI + L + + + RP
Sbjct: 108 ILFFIMLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 319
Query: 238 YR 239
+
Sbjct: 320 RK 321
>gi|239617397|ref|YP_002940719.1| protein of unknown function DUF218 [Kosmotoga olearia TBF 19.5.1]
gi|239506228|gb|ACR79715.1| protein of unknown function DUF218 [Kosmotoga olearia TBF 19.5.1]
Length = 254
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ F + LFS++ I T L +K L+ Y P S IV+LG G I P
Sbjct: 41 LSFSILIIGLFSYLLMSGIGTYLYVKPLETEYSVPNAS--LLDTAEAIVVLGGGMIIAP- 97
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG-LAESIVYNNKLLE 140
+EP + R+++ +++++ II++GG P L+ES V N LL
Sbjct: 98 ---YELEPGDHTLKRLYKAFQIHRA-----TGKPIIVTGGTPMGRDSLSESEVMLNTLLN 149
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G++ +D+ +E + +T +NA + + K + K I+LV+SA H+KRS F+ G+N
Sbjct: 150 WGIDENDVIVENSARNTNENAVRVAEICKEKKWKKIVLVTSAVHMKRSVESFEEQGLNVI 209
Query: 201 ASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIA 236
+DYL ++ +P + E+IGI+
Sbjct: 210 PYPTDYLYDYTDLSWVDFLPGRDALTANLSGIHEFIGIIWY 250
>gi|90579519|ref|ZP_01235328.1| hypothetical protein VAS14_01116 [Vibrio angustum S14]
gi|90439093|gb|EAS64275.1| hypothetical protein VAS14_01116 [Vibrio angustum S14]
Length = 275
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 20/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+++ +I L+V W + + F+ +F+ + + + T LL+ L+ Y + S
Sbjct: 19 LIIGFIGLLV-LWFTRNKKLASGIIAFSFLGIFA-VSFQPVSTSLLRPLEQQYPAFVGSS 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K N +++LGN I T P I E S + R+ E +R+ + M I+SG
Sbjct: 77 ---KPINFVMVLGNSHVIDKTFP-ITSELSRTALMRLVEGIRIARMYPGSKM----ILSG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++ + + L GV + DI L + DT++ A ++S++ KN++LV+
Sbjct: 129 Y-GGGTDISHARMMAKVALALGVSKSDILLLETAKDTWEEAHQAASVV---GDKNLVLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ F G+N + +++L + P S Y TE E +G L
Sbjct: 185 SASHMSRALYEFHQAGLNPIPAPTNFLASNKIKQPWIRYAPSSQFLYQTERYWHEKLGSL 244
Query: 235 IAYYR 239
R
Sbjct: 245 WQQLR 249
>gi|228993553|ref|ZP_04153461.1| hypothetical protein bpmyx0001_42800 [Bacillus pseudomycoides DSM
12442]
gi|228766144|gb|EEM14790.1| hypothetical protein bpmyx0001_42800 [Bacillus pseudomycoides DSM
12442]
Length = 342
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 29/237 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLL + LIV + IF F++++ F I T L + + + RP
Sbjct: 107 MLLIMLSLIVDPTRFFSPHFQPIFTGIFFIMVYFFFH---ISTFLTAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYHKQAAVASPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILV 179
G L E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 210 GQGPDENLPEAEAMQKYAIEKGIPIEHTVQENRSVNTYQNMLFSKQIMDSLKDRYKSIFT 269
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++ +HL R+ LY + G+N++ S +A +Y ++EYI I++
Sbjct: 270 TNNFHLFRAGLYAKQAGLNSQGIGS-----------KTAFYYWPNAMIREYIAIVVM 315
>gi|167902941|ref|ZP_02490146.1| hypothetical protein BpseN_11835 [Burkholderia pseudomallei NCTC
13177]
Length = 240
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 71/246 (28%), Positives = 121/246 (49%), Gaps = 14/246 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI---GWGIIPTILLKHLQFSYQRPL 57
M+L F ++ LLC+ R F + ++ GW P + L P+
Sbjct: 1 MILFNSFGLLFVVFLLCRKRRGAFAILAAGAALLWLIASGWLAAPLVALAQAGMQ---PV 57
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P D +IV+LG G + P + +RI +T LY +C++ + CT++
Sbjct: 58 AHPTMTGD-TVIVMLGAGIERRDGV----AIPPRDALARIDKTAELYSACRRTAQRCTVV 112
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGGDPQ +AE+ Y LL GV D+ E +S T++NA+F++ +++ ++I
Sbjct: 113 VSGGDPQVRSIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLI 172
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL--- 234
LV+S+Y +KR+ L F+ FG + ++ +A +P +AN ELAL E +G+
Sbjct: 173 LVTSSYQMKRALLDFERFGFAPQPVYANRRDARPGWLPRAANLANAELALHEIVGVAQFH 232
Query: 235 IAYYRG 240
+ G
Sbjct: 233 VYRRLG 238
>gi|13470862|ref|NP_102431.1| hypothetical protein mll0674 [Mesorhizobium loti MAFF303099]
gi|14021605|dbj|BAB48217.1| mll0674 [Mesorhizobium loti MAFF303099]
Length = 265
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 58/247 (23%), Positives = 106/247 (42%), Gaps = 16/247 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L ++ L ++ + + L+ + W + ++L L+ + RP L
Sbjct: 18 LTIFLLLAGLIAGMIGRRRLAVTGSVLAFLILALSTWTSLGAMMLNPLEERFPRPPLP-- 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LG G + E S S R+ ET L + +++SGG
Sbjct: 76 --QKVDGIVVLGGGFEGAINLARGGYELS-SSGDRMVETAILARRFPL----AKVVVSGG 128
Query: 122 DPQKHGLAE--SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
AE + + L+ GV D + LE +S +T++NA FS +++ G+ +LV
Sbjct: 129 HGAFFIDAEGDADSASRMLVPLGVSADRLVLEDKSRNTYENAIFSRKLVEPKPGETWLLV 188
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA-----NFYLTELALKEYIGIL 234
+SA+H+ R++ F G T DY + + L + T +AL+E+IG+
Sbjct: 189 TSAFHMPRAKALFDKAGFPTVPWPVDYHTSGKEGVGLFRDNAIDSVQNTTIALREWIGLF 248
Query: 235 IAYYRGN 241
+ G
Sbjct: 249 AYWLSGR 255
>gi|331646185|ref|ZP_08347288.1| putative KicA protein [Escherichia coli M605]
gi|330910700|gb|EGH39210.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli AA86]
gi|331044937|gb|EGI17064.1| putative KicA protein [Escherichia coli M605]
Length = 259
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 96/239 (40%), Gaps = 19/239 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++FQ G+N + ++ LN + IP ++ E +G + + +G+
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|15800781|ref|NP_286795.1| hypothetical protein Z1267 [Escherichia coli O157:H7 EDL933]
gi|15830257|ref|NP_309030.1| hypothetical protein ECs1003 [Escherichia coli O157:H7 str. Sakai]
gi|16128887|ref|NP_415440.1| conserved protein, DUF218 superfamily [Escherichia coli str. K-12
substr. MG1655]
gi|89107770|ref|AP_001550.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. W3110]
gi|91210021|ref|YP_540007.1| hypothetical protein UTI89_C0991 [Escherichia coli UTI89]
gi|117623138|ref|YP_852051.1| hypothetical protein APECO1_32 [Escherichia coli APEC O1]
gi|157155611|ref|YP_001462138.1| hypothetical protein EcE24377A_1017 [Escherichia coli E24377A]
gi|157160441|ref|YP_001457759.1| hypothetical protein EcHS_A1027 [Escherichia coli HS]
gi|168751183|ref|ZP_02776205.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|168757012|ref|ZP_02782019.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|168762943|ref|ZP_02787950.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|168769915|ref|ZP_02794922.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|168776227|ref|ZP_02801234.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|168784117|ref|ZP_02809124.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|168787349|ref|ZP_02812356.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|168801395|ref|ZP_02826402.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|170020678|ref|YP_001725632.1| hypothetical protein EcolC_2676 [Escherichia coli ATCC 8739]
gi|170080578|ref|YP_001729898.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
gi|170681104|ref|YP_001744250.1| hypothetical protein EcSMS35_2201 [Escherichia coli SMS-3-5]
gi|188494945|ref|ZP_03002215.1| conserved hypothetical protein [Escherichia coli 53638]
gi|194438715|ref|ZP_03070802.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|208808261|ref|ZP_03250598.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208816346|ref|ZP_03257525.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208822106|ref|ZP_03262425.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209397397|ref|YP_002269592.1| hypothetical protein ECH74115_1080 [Escherichia coli O157:H7 str.
EC4115]
gi|217325067|ref|ZP_03441151.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|218704347|ref|YP_002411866.1| hypothetical protein ECUMN_1113 [Escherichia coli UMN026]
gi|237707092|ref|ZP_04537573.1| YcbC [Escherichia sp. 3_2_53FAA]
gi|238900178|ref|YP_002925974.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|253774051|ref|YP_003036882.1| hypothetical protein ECBD_2675 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161034|ref|YP_003044142.1| hypothetical protein ECB_00924 [Escherichia coli B str. REL606]
gi|254792119|ref|YP_003076956.1| hypothetical protein ECSP_1024 [Escherichia coli O157:H7 str.
TW14359]
gi|256023379|ref|ZP_05437244.1| hypothetical protein E4_08394 [Escherichia sp. 4_1_40B]
gi|261227423|ref|ZP_05941704.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|291281921|ref|YP_003498739.1| hypothetical protein G2583_1155 [Escherichia coli O55:H7 str.
CB9615]
gi|293404225|ref|ZP_06648219.1| hypothetical protein ECGG_02613 [Escherichia coli FVEC1412]
gi|297516352|ref|ZP_06934738.1| hypothetical protein EcolOP_01862 [Escherichia coli OP50]
gi|298380005|ref|ZP_06989610.1| hypothetical protein ECFG_02808 [Escherichia coli FVEC1302]
gi|300901650|ref|ZP_07119710.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300929615|ref|ZP_07145077.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300937735|ref|ZP_07152536.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300949717|ref|ZP_07163696.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300955432|ref|ZP_07167806.1| hypothetical protein HMPREF9547_01317 [Escherichia coli MS 175-1]
gi|301022414|ref|ZP_07186297.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|301643440|ref|ZP_07243488.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|306812627|ref|ZP_07446820.1| hypothetical protein ECNC101_11962 [Escherichia coli NC101]
gi|307137549|ref|ZP_07496905.1| hypothetical protein EcolH7_05381 [Escherichia coli H736]
gi|312971048|ref|ZP_07785227.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|331641446|ref|ZP_08342581.1| putative KicA protein [Escherichia coli H736]
gi|331662333|ref|ZP_08363256.1| putative KicA protein [Escherichia coli TA143]
gi|77416806|sp|P0AB02|YCBC_ECO57 RecName: Full=Uncharacterized protein ycbC
gi|77416807|sp|P0AB01|YCBC_ECOLI RecName: Full=Uncharacterized protein ycbC
gi|12514089|gb|AAG55405.1|AE005281_8 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|1787150|gb|AAC74006.1| conserved protein, DUF218 superfamily [Escherichia coli str. K-12
substr. MG1655]
gi|4062491|dbj|BAA35666.1| conserved inner membrane protein [Escherichia coli str. K12 substr.
W3110]
gi|13360462|dbj|BAB34426.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|91071595|gb|ABE06476.1| probable membrane protein [Escherichia coli UTI89]
gi|115512262|gb|ABJ00337.1| YcbC [Escherichia coli APEC O1]
gi|157066121|gb|ABV05376.1| conserved hypothetical protein [Escherichia coli HS]
gi|157077641|gb|ABV17349.1| conserved hypothetical protein [Escherichia coli E24377A]
gi|169755606|gb|ACA78305.1| protein of unknown function DUF218 [Escherichia coli ATCC 8739]
gi|169888413|gb|ACB02120.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. DH10B]
gi|170518822|gb|ACB17000.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
gi|187768343|gb|EDU32187.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|188014720|gb|EDU52842.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|188490144|gb|EDU65247.1| conserved hypothetical protein [Escherichia coli 53638]
gi|188998655|gb|EDU67641.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|189355905|gb|EDU74324.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|189361104|gb|EDU79523.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|189366790|gb|EDU85206.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|189372700|gb|EDU91116.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|189376425|gb|EDU94841.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|194422347|gb|EDX38347.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|208728062|gb|EDZ77663.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208732994|gb|EDZ81682.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208737591|gb|EDZ85274.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209158797|gb|ACI36230.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4115]
gi|209774788|gb|ACI85706.1| hypothetical protein ECs1003 [Escherichia coli]
gi|209774790|gb|ACI85707.1| hypothetical protein ECs1003 [Escherichia coli]
gi|209774792|gb|ACI85708.1| hypothetical protein ECs1003 [Escherichia coli]
gi|209774794|gb|ACI85709.1| hypothetical protein ECs1003 [Escherichia coli]
gi|209774796|gb|ACI85710.1| hypothetical protein ECs1003 [Escherichia coli]
gi|217321288|gb|EEC29712.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|218431444|emb|CAR12322.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli UMN026]
gi|222032651|emb|CAP75390.1| Uncharacterized protein ycbC [Escherichia coli LF82]
gi|226898302|gb|EEH84561.1| YcbC [Escherichia sp. 3_2_53FAA]
gi|238860178|gb|ACR62176.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|242376735|emb|CAQ31448.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|253325095|gb|ACT29697.1| protein of unknown function DUF218 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972935|gb|ACT38606.1| conserved inner membrane protein [Escherichia coli B str. REL606]
gi|253977149|gb|ACT42819.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|254591519|gb|ACT70880.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
TW14359]
gi|260449934|gb|ACX40356.1| protein of unknown function DUF218 [Escherichia coli DH1]
gi|281178051|dbj|BAI54381.1| conserved hypothetical protein [Escherichia coli SE15]
gi|284920771|emb|CBG33834.1| putative membrane protein [Escherichia coli 042]
gi|290761794|gb|ADD55755.1| hypothetical protein G2583_1155 [Escherichia coli O55:H7 str.
CB9615]
gi|291428811|gb|EFF01836.1| hypothetical protein ECGG_02613 [Escherichia coli FVEC1412]
gi|298279703|gb|EFI21211.1| hypothetical protein ECFG_02808 [Escherichia coli FVEC1302]
gi|299881255|gb|EFI89466.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|300317655|gb|EFJ67439.1| hypothetical protein HMPREF9547_01317 [Escherichia coli MS 175-1]
gi|300354943|gb|EFJ70813.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300450898|gb|EFK14518.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300457242|gb|EFK20735.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300462452|gb|EFK25945.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|301078154|gb|EFK92960.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|305853390|gb|EFM53829.1| hypothetical protein ECNC101_11962 [Escherichia coli NC101]
gi|307627653|gb|ADN71957.1| hypothetical protein UM146_12950 [Escherichia coli UM146]
gi|309701196|emb|CBJ00496.1| putative membrane protein [Escherichia coli ETEC H10407]
gi|310336809|gb|EFQ01976.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|312945440|gb|ADR26267.1| hypothetical protein NRG857_04195 [Escherichia coli O83:H1 str. NRG
857C]
gi|315135568|dbj|BAJ42727.1| hypothetical protein ECDH1ME8569_0871 [Escherichia coli DH1]
gi|315287553|gb|EFU46959.1| conserved hypothetical protein [Escherichia coli MS 110-3]
gi|315619114|gb|EFU99694.1| conserved hypothetical protein [Escherichia coli 3431]
gi|320192594|gb|EFW67235.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli O157:H7 str.
EC1212]
gi|320637788|gb|EFX07580.1| hypothetical protein ECO5101_23325 [Escherichia coli O157:H7 str.
G5101]
gi|320642913|gb|EFX12114.1| hypothetical protein ECO9389_03076 [Escherichia coli O157:H- str.
493-89]
gi|320648370|gb|EFX17025.1| hypothetical protein ECO2687_19186 [Escherichia coli O157:H- str. H
2687]
gi|320653686|gb|EFX21760.1| hypothetical protein ECO7815_15513 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659831|gb|EFX27387.1| hypothetical protein ECO5905_25023 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320664300|gb|EFX31451.1| hypothetical protein ECOSU61_01678 [Escherichia coli O157:H7 str.
LSU-61]
gi|323190740|gb|EFZ76009.1| hypothetical protein ECRN5871_0979 [Escherichia coli RN587/1]
gi|323938026|gb|EGB34288.1| hypothetical protein ERCG_00752 [Escherichia coli E1520]
gi|323942836|gb|EGB39001.1| hypothetical protein ERDG_00704 [Escherichia coli E482]
gi|323953372|gb|EGB49238.1| hypothetical protein ERKG_00257 [Escherichia coli H252]
gi|323958225|gb|EGB53934.1| hypothetical protein ERLG_00664 [Escherichia coli H263]
gi|323962912|gb|EGB58486.1| hypothetical protein ERGG_00660 [Escherichia coli H489]
gi|323973205|gb|EGB68397.1| hypothetical protein ERHG_00864 [Escherichia coli TA007]
gi|326338185|gb|EGD62014.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli O157:H7 str.
1125]
gi|326346162|gb|EGD69900.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli O157:H7 str.
1044]
gi|331038244|gb|EGI10464.1| putative KicA protein [Escherichia coli H736]
gi|331060755|gb|EGI32719.1| putative KicA protein [Escherichia coli TA143]
Length = 259
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 96/239 (40%), Gaps = 19/239 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++FQ G+N + ++ LN + IP ++ E +G + + +G+
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|294491966|gb|ADE90722.1| conserved hypothetical protein [Escherichia coli IHE3034]
Length = 259
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 96/239 (40%), Gaps = 19/239 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVSARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++FQ G+N + ++ LN + IP ++ E +G + + +G+
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|193070748|ref|ZP_03051683.1| conserved hypothetical protein [Escherichia coli E110019]
gi|192955941|gb|EDV86409.1| conserved hypothetical protein [Escherichia coli E110019]
Length = 259
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 96/239 (40%), Gaps = 19/239 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV + I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPHEQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++FQ G+N + ++ LN + IP A ++ E +G + + +G+
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPAWLMHSDRVGYETLGRIWQWLKGS 252
>gi|82544659|ref|YP_408606.1| hypothetical protein SBO_2208 [Shigella boydii Sb227]
gi|187732229|ref|YP_001880883.1| hypothetical protein SbBS512_E2405 [Shigella boydii CDC 3083-94]
gi|81246070|gb|ABB66778.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|187429221|gb|ACD08495.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
gi|320173261|gb|EFW48470.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Shigella dysenteriae CDC
74-1112]
gi|320187456|gb|EFW62146.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Shigella flexneri CDC 796-83]
gi|332093351|gb|EGI98409.1| hypothetical protein SB359474_2557 [Shigella boydii 3594-74]
Length = 259
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTAKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|324113749|gb|EGC07724.1| hypothetical protein ERIG_02167 [Escherichia fergusonii B253]
Length = 259
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 19/239 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + I LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPIADHLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++FQ G+N + ++ LN + IP ++ E +G + + +G+
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|319783692|ref|YP_004143168.1| hypothetical protein Mesci_4004 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169580|gb|ADV13118.1| protein of unknown function DUF218 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 263
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 57/245 (23%), Positives = 108/245 (44%), Gaps = 18/245 (7%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFM--LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
IFL+++ + R++ + L+ + W + ++L L+ +QRP L
Sbjct: 20 IFLLLAGLLAVTIGRRRLAGAGSVLAFLILALSAWTSLGAMMLNPLEERFQRPPL----P 75
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ + IV+LG G + E + S R+ ET L + +++SGG
Sbjct: 76 EKVDGIVVLGGGFEGAINLARGGYELN-SSGDRMVETAILARRFPT----AKVVVSGGTG 130
Query: 124 Q--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
G ++ L GV D + LE +S +T++NA F+ ++ G+ +LV+S
Sbjct: 131 ALFLDGEGDAATAPRLLTALGVAADRMILENKSRNTYENAVFTKELVTPKPGETWLLVTS 190
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL-----SANFYLTELALKEYIGILIA 236
A+H+ R++ F G T DY + + L + + T +A++E+IG+
Sbjct: 191 AFHMPRAKALFDKAGFATVPWPVDYRTSGREGVGLFRDNPADSLQATTMAIREWIGLFAY 250
Query: 237 YYRGN 241
+ G
Sbjct: 251 WLSGR 255
>gi|47565235|ref|ZP_00236278.1| hypothetical protein membrane Spanning protein [Bacillus cereus
G9241]
gi|47558021|gb|EAL16346.1| hypothetical protein membrane Spanning protein [Bacillus cereus
G9241]
Length = 333
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 103/242 (42%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L+ + + IF + ++ F+ + L + + + RP
Sbjct: 96 ILFFIMLPIINPASLVSEHFQFIFAAISLITIYFFVH---LSNFLSAYFLYQFNRP---- 148
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 149 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 198
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNII 177
G GL E+ +E G+ + E +S++T+QN FS ++ K I
Sbjct: 199 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPNGKYRSI 258
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 259 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 307
Query: 238 YR 239
+
Sbjct: 308 RK 309
>gi|331682427|ref|ZP_08383046.1| putative KicA protein [Escherichia coli H299]
gi|331080058|gb|EGI51237.1| putative KicA protein [Escherichia coli H299]
Length = 259
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 19/239 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + I LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPIADRLLRPIENTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++FQ G+N + ++ LN + IP ++ E +G + + +G+
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|75758871|ref|ZP_00738983.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74493637|gb|EAO56741.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 351
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 107/242 (44%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ +L + + IF + ++ F+ + L + + + RP
Sbjct: 114 ILFFIMLPIINPANLFSEHFQFIFAAISLITMYFFVH---LSNFLSAYFLYQFNRP---- 166
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 167 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 216
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 217 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKTEGKYRSI 276
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 277 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 325
Query: 238 YR 239
+
Sbjct: 326 RK 327
>gi|26246946|ref|NP_752986.1| hypothetical protein c1061 [Escherichia coli CFT073]
gi|110641117|ref|YP_668847.1| hypothetical protein ECP_0931 [Escherichia coli 536]
gi|191172139|ref|ZP_03033683.1| conserved hypothetical protein [Escherichia coli F11]
gi|215486045|ref|YP_002328476.1| hypothetical protein E2348C_0913 [Escherichia coli O127:H6 str.
E2348/69]
gi|218688763|ref|YP_002396975.1| hypothetical protein ECED1_0950 [Escherichia coli ED1a]
gi|227884115|ref|ZP_04001920.1| inner membrane protein [Escherichia coli 83972]
gi|300978421|ref|ZP_07174269.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|301047819|ref|ZP_07194871.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|312969014|ref|ZP_07783221.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|26107346|gb|AAN79529.1|AE016758_133 Hypothetical protein ycbC [Escherichia coli CFT073]
gi|110342709|gb|ABG68946.1| putative membrane protein [Escherichia coli 536]
gi|190907666|gb|EDV67261.1| conserved hypothetical protein [Escherichia coli F11]
gi|215264117|emb|CAS08461.1| conserved predicted inner membrane protein [Escherichia coli
O127:H6 str. E2348/69]
gi|218426327|emb|CAR07152.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli ED1a]
gi|227838867|gb|EEJ49333.1| inner membrane protein [Escherichia coli 83972]
gi|300300311|gb|EFJ56696.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300409663|gb|EFJ93201.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|307552759|gb|ADN45534.1| conserved inner membrane protein [Escherichia coli ABU 83972]
gi|312286416|gb|EFR14329.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|315291218|gb|EFU50578.1| conserved hypothetical protein [Escherichia coli MS 153-1]
gi|320196586|gb|EFW71209.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli WV_060327]
gi|323967167|gb|EGB62591.1| hypothetical protein ERJG_01450 [Escherichia coli M863]
gi|323976693|gb|EGB71781.1| hypothetical protein ERFG_02482 [Escherichia coli TW10509]
gi|324009859|gb|EGB79078.1| hypothetical protein HMPREF9532_00410 [Escherichia coli MS 57-2]
gi|324012947|gb|EGB82166.1| hypothetical protein HMPREF9533_03015 [Escherichia coli MS 60-1]
gi|327253710|gb|EGE65339.1| hypothetical protein ECSTEC7V_1135 [Escherichia coli STEC_7v]
Length = 259
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 19/239 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + I LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPIADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++FQ G+N + ++ LN + IP ++ E +G + + +G+
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|229105438|ref|ZP_04236081.1| hypothetical protein bcere0019_45700 [Bacillus cereus Rock3-28]
gi|228677994|gb|EEL32228.1| hypothetical protein bcere0019_45700 [Bacillus cereus Rock3-28]
Length = 345
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + I++ L+ + IF + ++ FI + L + + + RP
Sbjct: 108 MLFFMLLPIINPASLVSSHLEPIFAGISLISVYFFIH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ E +S++T+QN FS ++ +++ + I
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLKHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 319
Query: 238 YR 239
+
Sbjct: 320 RK 321
>gi|218548436|ref|YP_002382227.1| hypothetical protein EFER_1064 [Escherichia fergusonii ATCC 35469]
gi|218355977|emb|CAQ88593.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia fergusonii ATCC 35469]
gi|325496858|gb|EGC94717.1| hypothetical protein ECD227_0955 [Escherichia fergusonii ECD227]
Length = 259
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 96/239 (40%), Gaps = 19/239 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++FQ G+N + ++ LN + IP ++ E +G + + +G+
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|228923560|ref|ZP_04086840.1| hypothetical protein bthur0011_45360 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228836029|gb|EEM81390.1| hypothetical protein bthur0011_45360 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 283
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L+ + IF + + FI + L + + + RP
Sbjct: 46 ILFFIMLPIINPASLVSSHLEPIFAAISLISFYFFIH---LSNFLSAYFLYQFNRP---- 98
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 99 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 148
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 149 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYKSI 208
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 209 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 257
Query: 238 YR 239
+
Sbjct: 258 RK 259
>gi|228999589|ref|ZP_04159166.1| hypothetical protein bmyco0003_41440 [Bacillus mycoides Rock3-17]
gi|229007135|ref|ZP_04164760.1| hypothetical protein bmyco0002_40340 [Bacillus mycoides Rock1-4]
gi|228754114|gb|EEM03534.1| hypothetical protein bmyco0002_40340 [Bacillus mycoides Rock1-4]
gi|228760115|gb|EEM09084.1| hypothetical protein bmyco0003_41440 [Bacillus mycoides Rock3-17]
Length = 342
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 103/237 (43%), Gaps = 29/237 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLL + LIV + IF F++++ F I T L + + + RP
Sbjct: 107 MLLIMLSLIVDPTRFFSPHFQPIFTGIFFIMVYFFFH---ISTFLTAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RCNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYHKQAAVASPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILV 179
G L E+ +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 210 GQGPDENLPEAEAMQKYAIEKGIPIEHTVQENRSVNTYQNMLFSKQIMDSLKDRYKSIFT 269
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++ +HL R+ LY + G+N++ S +A +Y ++EYI I++
Sbjct: 270 TNNFHLFRAGLYAKQAGLNSQGIGS-----------KTAFYYWPNAMIREYIAIVVM 315
>gi|293414200|ref|ZP_06656849.1| hypothetical protein ECDG_00753 [Escherichia coli B185]
gi|291434258|gb|EFF07231.1| hypothetical protein ECDG_00753 [Escherichia coli B185]
Length = 259
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLSLLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRD----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|261256154|ref|ZP_05948687.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
FRIK966]
Length = 259
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 96/239 (40%), Gaps = 19/239 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++FQ G+N + ++ LN + IP ++ E +G + + +G+
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGCIWQWLKGS 252
>gi|324328702|gb|ADY23962.1| hypothetical protein YBT020_23670 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 344
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + + IF + ++ FI + L + + + RP
Sbjct: 107 ILFFIMLPIINPASLFSEHFQFIFAAISLITMYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ + N I
Sbjct: 210 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYNSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 318
Query: 238 YR 239
+
Sbjct: 319 RK 320
>gi|82777557|ref|YP_403906.1| hypothetical protein SDY_2338 [Shigella dysenteriae Sd197]
gi|309787791|ref|ZP_07682401.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|331651940|ref|ZP_08352959.1| putative KicA protein [Escherichia coli M718]
gi|81241705|gb|ABB62415.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308924190|gb|EFP69687.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|331050218|gb|EGI22276.1| putative KicA protein [Escherichia coli M718]
Length = 259
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLSLLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|30062454|ref|NP_836625.1| hypothetical protein S0980 [Shigella flexneri 2a str. 2457T]
gi|56479770|ref|NP_706838.2| hypothetical protein SF0916 [Shigella flexneri 2a str. 301]
gi|110804928|ref|YP_688448.1| hypothetical protein SFV_0921 [Shigella flexneri 5 str. 8401]
gi|191166971|ref|ZP_03028794.1| conserved hypothetical protein [Escherichia coli B7A]
gi|193064658|ref|ZP_03045737.1| conserved hypothetical protein [Escherichia coli E22]
gi|194428374|ref|ZP_03060915.1| conserved hypothetical protein [Escherichia coli B171]
gi|209918170|ref|YP_002292254.1| hypothetical protein ECSE_0979 [Escherichia coli SE11]
gi|218694393|ref|YP_002402060.1| hypothetical protein EC55989_0965 [Escherichia coli 55989]
gi|256020952|ref|ZP_05434817.1| hypothetical protein ShiD9_18687 [Shigella sp. D9]
gi|260843169|ref|YP_003220947.1| hypothetical protein ECO103_0964 [Escherichia coli O103:H2 str.
12009]
gi|260867092|ref|YP_003233494.1| hypothetical protein ECO111_0988 [Escherichia coli O111:H- str.
11128]
gi|300816976|ref|ZP_07097195.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300902921|ref|ZP_07120866.1| hypothetical protein HMPREF9536_01066 [Escherichia coli MS 84-1]
gi|301302471|ref|ZP_07208602.1| hypothetical protein HMPREF9347_01048 [Escherichia coli MS 124-1]
gi|307311693|ref|ZP_07591333.1| protein of unknown function DUF218 [Escherichia coli W]
gi|309795095|ref|ZP_07689515.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|332282175|ref|ZP_08394588.1| conserved hypothetical protein [Shigella sp. D9]
gi|30040700|gb|AAP16431.1| hypothetical protein S0980 [Shigella flexneri 2a str. 2457T]
gi|56383321|gb|AAN42545.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|110614476|gb|ABF03143.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|190902965|gb|EDV62691.1| conserved hypothetical protein [Escherichia coli B7A]
gi|192927715|gb|EDV82330.1| conserved hypothetical protein [Escherichia coli E22]
gi|194413589|gb|EDX29870.1| conserved hypothetical protein [Escherichia coli B171]
gi|209911429|dbj|BAG76503.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218351125|emb|CAU96829.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli 55989]
gi|257758316|dbj|BAI29813.1| conserved predicted inner membrane protein [Escherichia coli
O103:H2 str. 12009]
gi|257763448|dbj|BAI34943.1| conserved predicted inner membrane protein [Escherichia coli
O111:H- str. 11128]
gi|281600279|gb|ADA73263.1| hypothetical protein SFxv_0991 [Shigella flexneri 2002017]
gi|300405063|gb|EFJ88601.1| hypothetical protein HMPREF9536_01066 [Escherichia coli MS 84-1]
gi|300530328|gb|EFK51390.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300842310|gb|EFK70070.1| hypothetical protein HMPREF9347_01048 [Escherichia coli MS 124-1]
gi|306908248|gb|EFN38747.1| protein of unknown function DUF218 [Escherichia coli W]
gi|308121399|gb|EFO58661.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|313650839|gb|EFS15240.1| hypothetical protein SF2457T_0842 [Shigella flexneri 2a str. 2457T]
gi|315060205|gb|ADT74532.1| conserved inner membrane protein [Escherichia coli W]
gi|315257961|gb|EFU37929.1| probable membrane protein [Escherichia coli MS 85-1]
gi|315296223|gb|EFU55530.1| conserved hypothetical protein [Escherichia coli MS 16-3]
gi|320202316|gb|EFW76887.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Escherichia coli EC4100B]
gi|323174979|gb|EFZ60594.1| hypothetical protein ECLT68_0536 [Escherichia coli LT-68]
gi|323175457|gb|EFZ61052.1| hypothetical protein ECOK1180_5741 [Escherichia coli 1180]
gi|323379235|gb|ADX51503.1| protein of unknown function DUF218 [Escherichia coli KO11]
gi|324019071|gb|EGB88290.1| hypothetical protein HMPREF9542_02266 [Escherichia coli MS 117-3]
gi|324117215|gb|EGC11123.1| hypothetical protein ERBG_02930 [Escherichia coli E1167]
gi|332104527|gb|EGJ07873.1| conserved hypothetical protein [Shigella sp. D9]
gi|332759007|gb|EGJ89317.1| hypothetical protein SF434370_1174 [Shigella flexneri 4343-70]
gi|332760112|gb|EGJ90410.1| hypothetical protein SF274771_1134 [Shigella flexneri 2747-71]
gi|332762691|gb|EGJ92954.1| hypothetical protein SFK671_1086 [Shigella flexneri K-671]
gi|332767869|gb|EGJ98059.1| hypothetical protein SF293071_1100 [Shigella flexneri 2930-71]
gi|333007013|gb|EGK26508.1| hypothetical protein SFK218_1285 [Shigella flexneri K-218]
gi|333008904|gb|EGK28364.1| hypothetical protein SFK272_1422 [Shigella flexneri K-272]
gi|333020002|gb|EGK39273.1| hypothetical protein SFK304_1250 [Shigella flexneri K-304]
gi|333020214|gb|EGK39484.1| hypothetical protein SFK227_1149 [Shigella flexneri K-227]
Length = 259
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|228910647|ref|ZP_04074458.1| hypothetical protein bthur0013_47910 [Bacillus thuringiensis IBL
200]
gi|228848915|gb|EEM93758.1| hypothetical protein bthur0013_47910 [Bacillus thuringiensis IBL
200]
Length = 283
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 107/242 (44%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ +L + + IF + ++ F+ + L + + + RP
Sbjct: 46 ILFFIMLPIINPANLFSEHFQFIFAAISLITMYFFVH---LSNFLSAYFLYQFNRP---- 98
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 99 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 148
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 149 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKPEGKYRSI 208
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 209 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 257
Query: 238 YR 239
+
Sbjct: 258 RK 259
>gi|218899964|ref|YP_002448375.1| hypothetical protein BCG9842_B0316 [Bacillus cereus G9842]
gi|218541300|gb|ACK93694.1| conserved domain protein [Bacillus cereus G9842]
Length = 345
Score = 168 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 107/242 (44%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ +L + + IF + ++ F+ + L + + + RP
Sbjct: 108 ILFFIMLPIINPANLFSEHFQFIFAAISLITMYFFVH---LSNFLSAYFLYQFNRP---- 160
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 161 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 211 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKTEGKYRSI 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 271 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 319
Query: 238 YR 239
+
Sbjct: 320 RK 321
>gi|319790359|ref|YP_004151992.1| protein of unknown function DUF218 [Thermovibrio ammonificans HB-1]
gi|317114861|gb|ADU97351.1| protein of unknown function DUF218 [Thermovibrio ammonificans HB-1]
Length = 261
Score = 168 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 18/242 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
LS F +++ + FF + + F + LK L+ +Y P LS
Sbjct: 18 LSVTFGVLALLLWFKRRKLAFFFAALSVAFLYFFSTEFGKDLTLKPLEDAYPYPKLSSL- 76
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG G R Q R+ E +L++ K+ I+ +GG
Sbjct: 77 --NCTYIVVLGGGIVPHSPAAGGRATVRPQVAKRLLEAWKLWRVLKK-----PIVATGGV 129
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ +E+ V L GV IK+E +S TF+NA+F+ +I ++I LV+SA
Sbjct: 130 LYPNVESEAAVMARFLEGLGVPASQIKVEGKSRTTFENAEFTYRLI---GPQSICLVTSA 186
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIAY 237
YH+ RS F+ FG +DY + S +P+ T +E++GI
Sbjct: 187 YHMPRSVRIFKSFGFKVTPVPTDYRVNRAGYNWLSFMPIYG--VDTYFGFREWVGIAFFE 244
Query: 238 YR 239
R
Sbjct: 245 LR 246
>gi|218553507|ref|YP_002386420.1| hypothetical protein ECIAI1_0961 [Escherichia coli IAI1]
gi|293433217|ref|ZP_06661645.1| hypothetical protein ECCG_01342 [Escherichia coli B088]
gi|300823660|ref|ZP_07103787.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|331667297|ref|ZP_08368162.1| putative KicA protein [Escherichia coli TA271]
gi|331676708|ref|ZP_08377404.1| putative KicA protein [Escherichia coli H591]
gi|218360275|emb|CAQ97825.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI1]
gi|291324036|gb|EFE63458.1| hypothetical protein ECCG_01342 [Escherichia coli B088]
gi|300523860|gb|EFK44929.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|331065653|gb|EGI37546.1| putative KicA protein [Escherichia coli TA271]
gi|331075397|gb|EGI46695.1| putative KicA protein [Escherichia coli H591]
Length = 259
Score = 168 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 19/239 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV + I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPHEQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++FQ G+N + ++ LN + IP ++ E +G + + +G+
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGS 252
>gi|238795861|ref|ZP_04639374.1| hypothetical protein ymoll0001_25330 [Yersinia mollaretii ATCC
43969]
gi|238720324|gb|EEQ12127.1| hypothetical protein ymoll0001_25330 [Yersinia mollaretii ATCC
43969]
Length = 263
Score = 168 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 53/241 (21%), Positives = 94/241 (39%), Gaps = 20/241 (8%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
++ W Q K F +++L I + LL L+ Y Q
Sbjct: 25 LALILLWFTRWQKSGKTLFTLSWLVLL-LISLQPVADRLLLPLEKQYATY----QGNDPV 79
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G T P A S R+ E +RLY++ ++ +GG +
Sbjct: 80 DYIVVLGGGYTFNPN-WAPSANLFANSLPRVTEGVRLYRAH----PDAKMVFTGGS-TAN 133
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ + GV DI + Q DT + A ++++ K +LV+SA HL
Sbjct: 134 NQSSAKTAAQVAESLGVPAADIVVLEQPKDTHEEAAAVATLV---GDKPFLLVTSASHLP 190
Query: 187 RSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ +F G++ + ++ L ++ IP + +E A E +G++ G
Sbjct: 191 RAIKFFTAIGLHPIPAPANQLAITTPLHSWERTIPAAVYLGHSERAWYETLGLMWQKLNG 250
Query: 241 N 241
Sbjct: 251 G 251
>gi|323947291|gb|EGB43299.1| hypothetical protein EREG_01236 [Escherichia coli H120]
Length = 259
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 19/239 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV + I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPHEQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++FQ G+N + ++ LN + IP ++ E +G + + +G+
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDCVGYETLGRIWQWLKGS 252
>gi|300921042|ref|ZP_07137429.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300412033|gb|EFJ95343.1| conserved hypothetical protein [Escherichia coli MS 115-1]
Length = 259
Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGLAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|291614927|ref|YP_003525084.1| hypothetical protein Slit_2472 [Sideroxydans lithotrophicus ES-1]
gi|291585039|gb|ADE12697.1| protein of unknown function DUF218 [Sideroxydans lithotrophicus
ES-1]
Length = 251
Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 48/227 (21%), Positives = 89/227 (39%), Gaps = 14/227 (6%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + ++ + L + +L+ L+ P ++ K + IV+LG GT
Sbjct: 34 KRPVIARTLLTVSVALLWLLSTPFFAEAMLQGLEGQ---PFVNDTSKPQADAIVVLGGGT 90
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
S ++ R+ RLY+ I+++GG P + L+E+
Sbjct: 91 NFRAPEYGG-DTVSKETLERLRYAARLYRQ-----TGKPILVTGGTPLGNDLSEAAQMKK 144
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L E E S +T +NA+ S ++K I LV+ A+H+ R+ FQ G
Sbjct: 145 TL-EQEFNVPVRWAEGASNNTLENARLSREVLKKEGISRIYLVTHAWHMPRAVQVFQAAG 203
Query: 197 INTKASCSDYLNAY----YSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + Y Y IP ++ + + + E IG+L +
Sbjct: 204 FQVYPAPTAYTTRYQLDLLVFIPSASALRDSRIFMHEMIGLLWYRLK 250
>gi|228903313|ref|ZP_04067444.1| hypothetical protein bthur0014_44780 [Bacillus thuringiensis IBL
4222]
gi|228967916|ref|ZP_04128927.1| hypothetical protein bthur0004_47040 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228791783|gb|EEM39374.1| hypothetical protein bthur0004_47040 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228856274|gb|EEN00803.1| hypothetical protein bthur0014_44780 [Bacillus thuringiensis IBL
4222]
Length = 283
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 107/242 (44%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ +L + + IF + ++ F+ + L + + + RP
Sbjct: 46 ILFFIMLPIINPANLFSEHFQFIFAAISLITMYFFVH---LSNFLSAYFLYQFNRP---- 98
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 99 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 148
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 149 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMLFSKEIMDSLKTEGKYRSI 208
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 209 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 257
Query: 238 YR 239
+
Sbjct: 258 RK 259
>gi|152981868|ref|YP_001355267.1| hypothetical protein mma_3577 [Janthinobacterium sp. Marseille]
gi|151281945|gb|ABR90355.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 258
Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats.
Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ R +S L+ + L + PL IV+LG G
Sbjct: 34 RWPRLGLGLSVLALVVLALCSTRFGATLFISPLEKFNPPLQLGDASG-AQAIVVLGGGRI 92
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
A + PS + R+ LY+ + H +++SGG P ++E+ V
Sbjct: 93 SNALEYAGQDIPSSPTLHRLRYAATLYR-----TTHLPVLVSGGQPDGAAVSEAAVMARV 147
Query: 138 LLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L E V LE S +T +NAQ S+ M++ K+I+LV+ A H++R++ F G
Sbjct: 148 LREDFSVPVR--WLEQASNNTAENAQLSARMLREAGVKHILLVTDAMHMQRAKQVFTQAG 205
Query: 197 INTKASCS----DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ A+ + + + +P S T AL E++G+ +R
Sbjct: 206 LKVVAAPTIFISNARHTPADFLPSSQWLQQTSYALHEWLGLAWYRWR 252
>gi|163942531|ref|YP_001647415.1| hypothetical protein BcerKBAB4_4633 [Bacillus weihenstephanensis
KBAB4]
gi|163864728|gb|ABY45787.1| protein of unknown function DUF218 [Bacillus weihenstephanensis
KBAB4]
Length = 344
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L + + IF + ++ FI + L + + + RP
Sbjct: 107 ILFCVLIPIINPASLFSEHFQFIFAAISLVTMYFFIH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ N +E G+ + E +S++T+QN FS ++ +++ + I
Sbjct: 210 GQGPDEGLPEAEAMQNYAVEKGIPLEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 318
Query: 238 YR 239
+
Sbjct: 319 RK 320
>gi|148255961|ref|YP_001240546.1| hypothetical protein BBta_4612 [Bradyrhizobium sp. BTAi1]
gi|146408134|gb|ABQ36640.1| hypothetical protein BBta_4612 [Bradyrhizobium sp. BTAi1]
Length = 262
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 98/222 (44%), Gaps = 14/222 (6%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ MLL + +G + +++L L+ + P P IIVL G + P +
Sbjct: 41 LVVAAMLLLAVLGLTPLGSLMLSPLESRF--PKWDPAKGAPDGIIVLGG---PVDPDLSI 95
Query: 85 IRIEP-SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLES 141
+ P + R+ + L + + I+ +GG E+ V + LL
Sbjct: 96 MYGMPVTVAGADRLIQAAALARRY----PNARIVFTGGSANLISTDAREADVAADILLSL 151
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV ++ + LE +S +T++NA FS +M+ G+ +LV+SA+H+ RS F+ G +
Sbjct: 152 GVAKERLTLERESRNTYENAVFSKAMVAPKPGERWLLVTSAFHMPRSVGLFRKAGFPVEP 211
Query: 202 SCSDYLNAYYSIIP--LSANFYLTELALKEYIGILIAYYRGN 241
D+ + ++A++E++G++ RG
Sbjct: 212 YPVDWRVGRVLDVDGVSLLGLRRADIAVREWVGLVAYRLRGR 253
>gi|254457969|ref|ZP_05071396.1| integral membrane protein [Campylobacterales bacterium GD 1]
gi|207085362|gb|EDZ62647.1| integral membrane protein [Campylobacterales bacterium GD 1]
Length = 243
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 21/243 (8%)
Query: 4 SWIFLIVSYWHLLCQ----SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+F + W +L + + K+ F LLF F + L+ L+ Y +
Sbjct: 14 GMVFSLFVIWFILSKLKKYKLAKVSLSLAFGLLFMF-SYPPFSNYLISDLENQYPKY--- 69
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+K + I +LGNG T P I S R E + +Y + +I +
Sbjct: 70 -DYKHNIKYIHVLGNGHNGDETQPISSII-SEAGTRRALEGIIIYNQTE----GSKLIFT 123
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G ++ + + L GV+ +DI L ++ DT + A F+ ++ + +LV
Sbjct: 124 G-FGGDEKISVAKMNKRLALALGVKEEDIILGEKAKDTQEEAYFTKELV---GDEPFVLV 179
Query: 180 SSAYHLKRSQLYFQHFGINTKASCS-DYLNAYYSI--IPLSANFYLTELALKEYIGILIA 236
+SA H+ RS + F+ G+ A+ + Y + + S +P +FYL+++A+ EY+GIL +
Sbjct: 180 TSASHIPRSMMLFESIGLKPIAAPTAFYKDKFRSFLKLPTMGSFYLSQIAMHEYLGILWS 239
Query: 237 YYR 239
R
Sbjct: 240 KLR 242
>gi|301023042|ref|ZP_07186851.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|300397248|gb|EFJ80786.1| conserved hypothetical protein [Escherichia coli MS 69-1]
Length = 259
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 19/239 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++FQ G+N + ++ LN + IP ++ E +G + + + +
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKSS 252
>gi|240139755|ref|YP_002964232.1| hypothetical protein MexAM1_META1p3209 [Methylobacterium extorquens
AM1]
gi|240009729|gb|ACS40955.1| conserved hypothetical protein, DUF218; putative membrane protein
precursor [Methylobacterium extorquens AM1]
Length = 265
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 16/231 (6%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ I ++ ++ F+ L F G + L L+ + + IV+LG
Sbjct: 35 GRGIGRVLTVASFVGLL-FGGLSPLSAWTLAPLENRFPNFI---DDGTPVTGIVVLGGTV 90
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVY 134
+I +I + ++ R L + ++ SGG + ++E+ +
Sbjct: 91 EADTSIGRDQITVN-EAGERAIALADLARRY----PQARLVFSGGAGSTREDAVSEAEIV 145
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ GV R+ + LE QS +T +NA FS+ M++ G+ +LV+SA+H+ RS F+
Sbjct: 146 SRYADTLGVPRNRLILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWHMPRSMGCFRK 205
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLT-----ELALKEYIGILIAYYRG 240
G + A DY + A+F T ++ +KE+IG++ G
Sbjct: 206 AGFDVTAYPVDYRTNWPRDAYRLASFASTGLGELDIGVKEWIGMIAYRLTG 256
>gi|323185374|gb|EFZ70738.1| hypothetical protein ECOK1357_1327 [Escherichia coli 1357]
Length = 248
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 16 LALLWFSRFQKTGKIF-ISIGWLSLLLLSLQPVADRLLRPIESTYSTWNNS----QKVDY 70
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 71 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGIAKTNTV 125
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 126 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 182
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 183 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 240
>gi|254197234|ref|ZP_04903656.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|169653975|gb|EDS86668.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
Length = 240
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 72/246 (29%), Positives = 122/246 (49%), Gaps = 14/246 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI---GWGIIPTILLKHLQFSYQRPL 57
M+L F ++ LLC+ R F + ++ GW P + L P+
Sbjct: 1 MILFNSFGLLFVVFLLCRKPRGAFAILAAGAALLWLIASGWLAAPLVALAQAGMQ---PV 57
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
P D +IV+LG G + P + +RI +T LY +C++ + CT++
Sbjct: 58 AHPTMTGD-TVIVMLGAGIERRDGV----AIPPRDALARIDKTAELYSACRRTAQRCTVV 112
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGGDPQ G+AE+ Y LL GV D+ E +S T++NA+F++ +++ ++I
Sbjct: 113 VSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLI 172
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL--- 234
LV+S+Y +KR+ L F+ FG + ++ +A +P +AN ELAL E +G+
Sbjct: 173 LVTSSYQMKRALLDFEWFGFAPQPVYANRRDARLGWLPRAANLANAELALHEIVGVAQFH 232
Query: 235 IAYYRG 240
+ G
Sbjct: 233 VYRRLG 238
>gi|153009344|ref|YP_001370559.1| hypothetical protein Oant_2014 [Ochrobactrum anthropi ATCC 49188]
gi|151561232|gb|ABS14730.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 235
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 17/237 (7%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
W + + +S +L F+ + + ++LL L+ + +P PQ + IV+
Sbjct: 1 MWRGSRRLSMSVLGLSIAILFFA--AFTTLGSVLLAPLEDRFAKPDAMPQ---HVDGIVV 55
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLA 129
LG G + + RIFE MRL + +I+SGGD +
Sbjct: 56 LG-GYMNGDINAGRKGFELNSAADRIFEAMRLARLY----PDARVIVSGGDGAFFEEAAK 110
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E+ L++ G + E +S +T +NA FS + + G+ +LV+SAYH+ RS
Sbjct: 111 EADSTRQMLIDLGFSGERYIYENKSRNTVENAIFSKELAQPKPGETWLLVTSAYHMPRSV 170
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLS-----ANFYLTELALKEYIGILIAYYRGN 241
F+ + A DY L +A++E++G+ + G
Sbjct: 171 GCFRKADFDVVAWPVDYKTRARERFALYLESPNEALSRFSVAMREWVGLAAYWLAGK 227
>gi|228988059|ref|ZP_04148160.1| hypothetical protein bthur0001_47210 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228771693|gb|EEM20158.1| hypothetical protein bthur0001_47210 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 344
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 49/242 (20%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + I++ L+ + + IF + ++ F+ + L + + + RP
Sbjct: 107 ILFFIMLPIINPASLVSEHFQFIFAAISLITIYFFVH---LSNFLSAYFLYQFNRP---- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I++LG+G P + SRI + + Y + TII SG
Sbjct: 160 --RRNQDFIIVLGSGLINDKVPPLL--------ASRINKAIDFYWKQAAVNTPPTIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G GL E+ +E G+ + E +S++T+QN FS ++ +++ I
Sbjct: 210 GQGPDEGLPEAEAMQKYAVEKGIPLEHTVQENRSVNTYQNMSFSKDIMDSLKPDGKYRSI 269
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ +HL R+ +Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 270 FTTNNFHLFRAGIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMG 318
Query: 238 YR 239
+
Sbjct: 319 RK 320
>gi|261252465|ref|ZP_05945038.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio orientalis CIP 102891]
gi|260935856|gb|EEX91845.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio orientalis CIP 102891]
Length = 267
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 24/250 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQR 55
M L + LI+ L+ + CF++LFSFIG + + + LL L+ Y
Sbjct: 13 MPLPAM-LIIGMLGLMLIMFTRKQKTGCFVVLFSFIGIFLIAFQPVSSRLLMPLERQYSA 71
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
+ + +++LG+G + IP E S R+ E +R+ +
Sbjct: 72 FF---PVDESIDYVMVLGSGHVVDDKIPPTS-ELSRTGLMRLAEGIRVMRIY----PGSK 123
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SG ++ + + L GV + DI L + DT++ A+ +++ + K
Sbjct: 124 LILSGYAGGSE-VSNARMMAKVALSLGVSKSDIILLETAKDTWEEARQAAAFV---TTKK 179
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKE 229
+++V+SA H+KR+ F G++ + ++YL A+ P TE E
Sbjct: 180 LVVVTSASHMKRALNEFHSAGMDPYPAPTNYLAQNNITQAWEKYTPKGKYLEQTERYWHE 239
Query: 230 YIGILIAYYR 239
+G + R
Sbjct: 240 TLGRIWQSLR 249
>gi|333006363|gb|EGK25871.1| hypothetical protein SFVA6_1402 [Shigella flexneri VA-6]
Length = 259
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGTRVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|218700561|ref|YP_002408190.1| hypothetical protein ECIAI39_2227 [Escherichia coli IAI39]
gi|331672456|ref|ZP_08373246.1| putative KicA protein [Escherichia coli TA280]
gi|218370547|emb|CAR18354.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI39]
gi|331070362|gb|EGI41727.1| putative KicA protein [Escherichia coli TA280]
Length = 259
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 19/239 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++FQ G+N + ++ LN + IP ++ E +G + + + +
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKSS 252
>gi|163852418|ref|YP_001640461.1| hypothetical protein Mext_3001 [Methylobacterium extorquens PA1]
gi|163664023|gb|ABY31390.1| protein of unknown function DUF218 [Methylobacterium extorquens
PA1]
Length = 278
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ I ++ ++ F+ L G + L L+ + IV+LG
Sbjct: 48 GRGIGRVLTIASFVGLLV-AGLSPLSAWTLAPLENRFPSFT---DDGTPVTGIVVLGGTV 103
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVY 134
+I +I + ++ R L + ++ SGG + ++E+ +
Sbjct: 104 EADTSIGRDQITVN-EAGERAIALADLARRY----PQARLVFSGGAGSTREDAVSEAEIV 158
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ GV R+ + LE QS +T +NA FS+ M++ G+ +LV+SA+H+ RS F+
Sbjct: 159 SRYADTLGVPRNRLILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWHMPRSMGCFRK 218
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYL-----TELALKEYIGILIAYYRG 240
G + A DY + A+F ++ +KE+IG++ G
Sbjct: 219 AGFDVTAYPVDYRTNWPRDAYRLASFASDGLGELDIGVKEWIGMIAYRLTG 269
>gi|323159547|gb|EFZ45527.1| hypothetical protein ECE128010_4163 [Escherichia coli E128010]
Length = 259
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 94/237 (39%), Gaps = 19/237 (8%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++FQ G+N + ++ LN + IP ++ E +G + + +
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLK 250
>gi|293409297|ref|ZP_06652873.1| hypothetical protein ECEG_00230 [Escherichia coli B354]
gi|291469765|gb|EFF12249.1| hypothetical protein ECEG_00230 [Escherichia coli B354]
Length = 259
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 19/239 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++FQ G+N + ++ LN + IP ++ E +G + + + +
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKSS 252
>gi|157364443|ref|YP_001471210.1| hypothetical protein Tlet_1592 [Thermotoga lettingae TMO]
gi|157315047|gb|ABV34146.1| protein of unknown function DUF218 [Thermotoga lettingae TMO]
Length = 245
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 60/240 (25%), Positives = 101/240 (42%), Gaps = 21/240 (8%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+FL++ +S FM L F F G+ L+ L+ SY+ K
Sbjct: 21 LFLLIGI-LQFKKSRNTAIFMIFLALCFYFFSSGLGALTLVLPLERSYE-----ISIPKK 74
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD-PQ 124
+ +V+LG G P +PS S R+ E +R+ K +IISGG P
Sbjct: 75 IDAVVVLGGGIVKTPN----GYQPSQSSIVRLLEGVRIAKDFDSF-----LIISGGMLPL 125
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E++V + + G + I +E + TF+NA F+S + + +N+++V+SA H
Sbjct: 126 LNQPPEAVVMRDLAISLGFPAEAIIIEPDAKTTFENAIFTSQICREKGFQNVVVVTSAIH 185
Query: 185 LKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+KR+ F + YL + +P A+ E IGIL ++
Sbjct: 186 MKRAIYSFSKARFTVHPCPTGYLYNHSKLGWSDYLPNRDALTANLWAIHEIIGILWYRFK 245
>gi|37680486|ref|NP_935095.1| hypothetical protein VV2302 [Vibrio vulnificus YJ016]
gi|320155855|ref|YP_004188234.1| membrane protein [Vibrio vulnificus MO6-24/O]
gi|326423949|ref|NP_760999.2| membrane protein [Vibrio vulnificus CMCP6]
gi|37199234|dbj|BAC95066.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
gi|319931167|gb|ADV86031.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio vulnificus MO6-24/O]
gi|319999327|gb|AAO10526.2| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Vibrio vulnificus CMCP6]
Length = 266
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
CF++LFSF+G + + + LL L+ Y L Q + +++LGNG +
Sbjct: 38 GCFIILFSFLGIFLVSFQPVASKLLMPLERQYSVFLPEVQ---TVDYVMVLGNGHVVDDQ 94
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
IP E S S R+ E +R+ K +I+SG + + + N L
Sbjct: 95 IPPTS-ELSRASLMRLTEGIRILKMY----PGSKLILSGYAGGSET-SHARMMANVALAL 148
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + DI L + DT++ A+ +++ ++ K ++LV+SA H+ R+ F GI
Sbjct: 149 GVAKSDIILLEDAKDTWEEARQAAAFVRQ---KQLVLVTSASHMARAMKEFHDAGITPLP 205
Query: 202 SCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ ++YL A+ P + TE E +G L R
Sbjct: 206 APTNYLAQKNISQAWDRYAPKAIYLEQTERYWYETLGQLWQGMR 249
>gi|269102447|ref|ZP_06155144.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268162345|gb|EEZ40841.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 278
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 51/245 (20%), Positives = 104/245 (42%), Gaps = 20/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+++ +I L + ++ + F++ +L + + I T LL+ L+ +
Sbjct: 19 LIIGFIGLYLLWFT--RRKGLAGGFITASLLGILLLSFQPISTSLLRPLEKQNAPFIPHS 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
N +++LG G I P I + S + R+ E +R+Y+ +I+SG
Sbjct: 77 T---PVNYVMVLGAGHVIDNAFP-ITSQLSRAALMRLVEGIRIYRMY----PGSKLILSG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++ + + L V + DI L + DT++ A ++S++ KN++LV+
Sbjct: 129 Y-GGGSDISHARMMAKVALALDVNKADILLLETAKDTWEEAFQAASVV---GDKNLVLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ F G+N + +++L + P S +E E +G +
Sbjct: 185 SASHMSRALYEFHQAGLNPIPAPTNFLASNKIEQPWVRYAPSSKYLEQSERYWHERMGQI 244
Query: 235 IAYYR 239
R
Sbjct: 245 WQRLR 249
>gi|242239630|ref|YP_002987811.1| hypothetical protein Dd703_2202 [Dickeya dadantii Ech703]
gi|242131687|gb|ACS85989.1| protein of unknown function DUF218 [Dickeya dadantii Ech703]
Length = 259
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 107/246 (43%), Gaps = 19/246 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML++ + L + ++ ++ R ++ LL + + LL+ L+ Y P +P
Sbjct: 20 MLVAGVALALLWFSRWQKTAR--LMLTGSWLLLLLLSLQPVADRLLQPLESRY--PTWNP 75
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ N IV+LG G T P A S R+ E +RLY++ + +I +G
Sbjct: 76 SFPA-VNYIVVLGGGYTFNPD-WAPSANLLSNSLPRVTEGIRLYRA----NPGAKLIFTG 129
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
Q + ++ + GV DI L Q+ DT + A+ ++ ++ + +LV+
Sbjct: 130 AAAQGNTVSSARTAARVAESLGVPAQDILLLDQAHDTEEEARDAARLVGQ---QPFLLVT 186
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGIL 234
SA HL R+ +F G++ + ++ LN + I P E A E +G+L
Sbjct: 187 SANHLPRAMNFFLSQGLHPIPAPANQLAITSPLNLWERIFPSPLYLSHAERAWYEELGLL 246
Query: 235 IAYYRG 240
+G
Sbjct: 247 WQRLKG 252
>gi|206581004|ref|YP_002239432.1| hypothetical protein KPK_3613 [Klebsiella pneumoniae 342]
gi|288936282|ref|YP_003440341.1| hypothetical protein Kvar_3429 [Klebsiella variicola At-22]
gi|290510662|ref|ZP_06550032.1| hypothetical protein HMPREF0485_02432 [Klebsiella sp. 1_1_55]
gi|206570062|gb|ACI11838.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
gi|288890991|gb|ADC59309.1| protein of unknown function DUF218 [Klebsiella variicola At-22]
gi|289777378|gb|EFD85376.1| hypothetical protein HMPREF0485_02432 [Klebsiella sp. 1_1_55]
Length = 259
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 22/211 (10%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWK--KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
+ LLK ++ SY P W+ + + +V+LG G T P A S R
Sbjct: 56 QPVADSLLKPIEDSY------PTWRGEQPVSYVVVLGGGYTWNPE-WAPSSNLINNSLPR 108
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ E +RL+++ + +I +G + + ++ + GV R DI + + D
Sbjct: 109 LTEGIRLWQA----NPGSKMIFTGAAAKTNPVSTAEAGARVAESLGVPRSDIIVLDRPKD 164
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAY 210
T + AQ + + +LV+SA HL R+ ++F+H G++ + ++ LN +
Sbjct: 165 TEEEAQAVK---RAIGDAPFLLVTSASHLPRAMIFFRHAGLDPLPAPANQLAVTSPLNPW 221
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYRGN 241
IP ++ E +G + + +G
Sbjct: 222 ERAIPSPVWLMHSDRVGYETLGRVWQWLKGG 252
>gi|229523809|ref|ZP_04413214.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae bv. albensis
VL426]
gi|229337390|gb|EEO02407.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio cholerae bv. albensis
VL426]
Length = 282
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 23/244 (9%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQ 61
LI+ + L+ C ++LFS G + + T LL L+ +Y L
Sbjct: 27 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL---P 83
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +++LGNG I IP E + + R+ E +R+ + +I+SG
Sbjct: 84 VEGTLDYVMVLGNGHVIDDDIPPTS-ELTRAALMRLTEGIRISRMY----PGSKLILSGY 138
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ + + L GV + DI L + D ++ A+ +++ ++ K ++LV+S
Sbjct: 139 AGGSE-VSHARMMARVALALGVPKSDIILLETAKDAWEEARQAAAFVQQ---KRMVLVTS 194
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+KR+ F+ G+ + ++YL + IP S TE E +G++
Sbjct: 195 ASHMKRAMREFESAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLEQTEQYWHETLGLMW 254
Query: 236 AYYR 239
R
Sbjct: 255 QTLR 258
>gi|83814701|ref|YP_445779.1| hypothetical protein SRU_1660 [Salinibacter ruber DSM 13855]
gi|83756095|gb|ABC44208.1| Uncharacterized ACR, COG1434 family [Salinibacter ruber DSM 13855]
Length = 281
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 19/247 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLL ++V W + + +L+ ++ L L+ + P
Sbjct: 20 MLLVGTGIVVGNWW----RRSGMALLVGGVLVLWVASAPLVSDWLRGRLEGQH--PPTRV 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
V+LG G + P P + R++ RLY + K +I SG
Sbjct: 74 DSLPSAEAAVVLGGG--VSPPRPPRIHPDLNDAADRVWHAARLYHAGKV----PLVIASG 127
Query: 121 G-DPQKHGLA-ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G P K A E+ N L + GV D I LE++S +T++NA ++ ++ ++L
Sbjct: 128 GTQPWKRPDAREAPATNVLLQDWGVPGDAILLESKSANTYENATRTAELLDRRGLNCVLL 187
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
V+SA H+ R+ F+ GI + +D ++P + + A++EY+G
Sbjct: 188 VTSALHMPRALAVFRSAGIKAVPAPTDVQVGDRNYTVLDVLPDAGALAGSTAAIREYVGY 247
Query: 234 LIAYYRG 240
L+ +RG
Sbjct: 248 LVYDWRG 254
>gi|260854211|ref|YP_003228102.1| hypothetical protein ECO26_1046 [Escherichia coli O26:H11 str.
11368]
gi|257752860|dbj|BAI24362.1| conserved predicted inner membrane protein [Escherichia coli
O26:H11 str. 11368]
gi|323157193|gb|EFZ43316.1| hypothetical protein ECEPECA14_0984 [Escherichia coli EPECa14]
Length = 259
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 96/238 (40%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG+G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGDGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|170726063|ref|YP_001760089.1| hypothetical protein Swoo_1709 [Shewanella woodyi ATCC 51908]
gi|169811410|gb|ACA85994.1| protein of unknown function DUF218 [Shewanella woodyi ATCC 51908]
Length = 264
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+S ++L F+ +L L+ Y ++ G ++++LG+G + A
Sbjct: 42 LLSLAIVLLVFLSSTPGSNLLSSPLENKYS---VNSNTIPKGCLVMVLGSGHDESISGTA 98
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
++ + S + +R+ E +R Y C +++SG + L+ + V +E G++
Sbjct: 99 VQ-KLSSTALARLSEGIRQY----NLGSDCKLVVSGWSGGEGTLSHAEVMAEAAIELGID 153
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ I + DT + A+F I N + LV+SA H+ RS FQ+ G+ +A+ +
Sbjct: 154 NERIIRFPLARDTIEEAEFLKWEIGNYPFR---LVTSASHMPRSMAIFQNIGLAPQAAPT 210
Query: 205 DYLNAYYSIIPL-SANFYLTELALKEYIGILIAYYR 239
D++ L + N + ++ A+ EY+G L +
Sbjct: 211 DFMTRQGRWWRLDAENLWSSQRAIHEYLGRLWFKIK 246
>gi|299135177|ref|ZP_07028368.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
gi|298590154|gb|EFI50358.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
Length = 264
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 17/248 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L++ + LI L + + +LL G+ + +LL L + P
Sbjct: 18 LIATVCLIGVMLSLTRWRKAGVRIGAAGILLLLVCGYSPLGNVLLLTLSERF--PAWQES 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS-YSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IIVL G I P + A+R P S R+ L + + I++SG
Sbjct: 76 GRAPDGIIVLGGA---INPDLTAVRGAPEMNSSAERMTAAAVLARRF----PNAKIVLSG 128
Query: 121 GD--PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G+ P E+ V L + GV D I +E +S T++NA+F+ +I + G+ ++L
Sbjct: 129 GNANPFHPLSTEAEVGRKFLEDLGVADDRIVMEGRSRTTYENAEFTRPLIHPVAGERLLL 188
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGI 233
V+SAYH+ R+ F+ G N +A D+ + + LS + A+ E++G+
Sbjct: 189 VTSAYHMPRAMGVFRAAGFNVEAYPVDWRTRGWVDAERPFLTLSGGLGRLDTAVHEWVGL 248
Query: 234 LIAYYRGN 241
+ G
Sbjct: 249 IGYRLAGR 256
>gi|15964004|ref|NP_384357.1| hypothetical protein SMc00331 [Sinorhizobium meliloti 1021]
gi|15073180|emb|CAC41688.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
Length = 335
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 62/247 (25%), Positives = 108/247 (43%), Gaps = 16/247 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-WGIIPTILLKHLQFSYQRPLLSPQ 61
L+++ L+V +L + R +S F L F+ + + L+ L+ + RP +P+
Sbjct: 90 LAFLALVVGVLLMLGRFRRSGGTLSAFGLAVLFVTLFTTAGSYFLQILEDRFPRP--TPE 147
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IIVL G + + Q+ R ET+RL ++ I++SGG
Sbjct: 148 PTELACIIVL--GGAFENVVMASRGGMELNQAAERFVETLRLAQAY----PQARILVSGG 201
Query: 122 DPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
D G+ E + N G+ D + E +S TF+NA+++ ++ + LV
Sbjct: 202 DGSLSGIYEGDAHASENFFGTFGIGSDRLIREGESRTTFENARYTRDLLAKNGLERCALV 261
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGIL 234
+SAYH+ RS F+ G+ +DY + + S N L A KE+ G++
Sbjct: 262 TSAYHMPRSIGLFRANGMEVTPWPTDYRTSGKVRLGFDFTQPSLNAQLATTAAKEWTGLV 321
Query: 235 IAYYRGN 241
Y G
Sbjct: 322 AYYLLGR 328
>gi|300925402|ref|ZP_07141287.1| hypothetical protein HMPREF9548_03480 [Escherichia coli MS 182-1]
gi|301326634|ref|ZP_07219964.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|300418472|gb|EFK01783.1| hypothetical protein HMPREF9548_03480 [Escherichia coli MS 182-1]
gi|300846679|gb|EFK74439.1| conserved hypothetical protein [Escherichia coli MS 78-1]
Length = 259
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIRQWLKG 251
>gi|75675900|ref|YP_318321.1| hypothetical protein Nwi_1708 [Nitrobacter winogradskyi Nb-255]
gi|74420770|gb|ABA04969.1| Protein of unknown function DUF218 [Nitrobacter winogradskyi
Nb-255]
Length = 280
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 18/246 (7%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCF---MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
I LI L S + + + G+ + +LL L +
Sbjct: 34 IALICGLGLCLSLSRWRRAGVGLLMAGIAALLIFGYSPLGNVLLLTLSERFP---AWQHD 90
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+D + I++LG ++ +E + S R+ + L + + I+ SGG
Sbjct: 91 GRDPDGIIVLGGAVDADISVSRGAVE-TNASAERVIAALELARRFPK----ARIVYSGGA 145
Query: 123 PQKHG--LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
AE+ V + G+ R+ I LET+S T +NA+F+ ++K G+ +LV+
Sbjct: 146 GNLIAGLRAEAPVMGRLFEQFGIPRERIVLETRSRTTDENARFTRELVKPESGERWLLVT 205
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILI 235
SAYH+ RS F+ G + + D+ A+ LSA + A E++G+L+
Sbjct: 206 SAYHMPRSVGVFRKAGFDVEPYPVDWRTRGWIDAWMPFDKLSAGLARADTAAHEWVGLLV 265
Query: 236 AYYRGN 241
G
Sbjct: 266 YRMTGR 271
>gi|190889771|ref|YP_001976313.1| hypothetical protein RHECIAT_CH0000139 [Rhizobium etli CIAT 652]
gi|190695050|gb|ACE89135.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 262
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 56/263 (21%), Positives = 101/263 (38%), Gaps = 35/263 (13%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIP--------------------TIL 45
+FLI + CQ + F + F L+ + W ++ +L
Sbjct: 1 MFLISKLVWIFCQPLSLAFLLVFFALIAGLLRWRVLSILGTGASALILFVTLYTTAGNLL 60
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
++ L+ + +P P+ + +++LG IE + R E +RL +
Sbjct: 61 MQGLEQRFAKPAADPENLQ---CMIVLGGAFENEVNTARHGIEFNG-GADRFVEALRLAQ 116
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQNAQF 163
Q I++SGGD G+ E G+ RD + ETQS TF+NA
Sbjct: 117 KFPQS----RILVSGGDGSMSGIYEGDAAASERFFPLFGIGRDRLIEETQSRTTFENAVN 172
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSA 218
+ + + +L++S +H+ RS F+ GI+ +DY +
Sbjct: 173 TRDFLAGQGLSHCLLITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRPGLDFTQPNL 232
Query: 219 NFYLTELALKEYIGILIAYYRGN 241
N A++E+ G++ Y G
Sbjct: 233 NAQNMATAIREWYGLVGYYLAGR 255
>gi|332711315|ref|ZP_08431247.1| hypothetical protein LYNGBM3L_63860 [Lyngbya majuscula 3L]
gi|332349864|gb|EGJ29472.1| hypothetical protein LYNGBM3L_63860 [Lyngbya majuscula 3L]
Length = 281
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 56/268 (20%), Positives = 103/268 (38%), Gaps = 36/268 (13%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + L+V+ ++ +++ + L++ L++ Y P+
Sbjct: 18 LACVLLVVALVMSWRNPRWVPIPVALALIVLLVSSNTWVTNSLIRSLEWQYIPNSELPE- 76
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI--IISG 120
+ IV+LG T ++ R+ +LY+ K + I+ G
Sbjct: 77 ---ADAIVILGGATKPPFPPRPTPEVD--EAGDRVLYGAQLYREGKAPWVIPAGGRIVWG 131
Query: 121 --------------GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS 166
G + ES L + GV R I E++SL+T QNA
Sbjct: 132 SSSNNSSQRLSSESGQSSQRLAPESEDMAQILEDLGVPRAAIIQESRSLNTHQNAVNVRK 191
Query: 167 MIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI------------- 213
++ ++LV+SA H+ RS L F+ GI+ + +D+L + + +
Sbjct: 192 ILDQRDFPKVLLVTSAIHMPRSVLVFRRQGIDVIPAPTDFLVSQHELDEPSSSSQAALLH 251
Query: 214 -IPLSANFYLTELALKEYIGILIAYYRG 240
+P + A+KEYIGI+ RG
Sbjct: 252 SLPNAEQLSRITRAIKEYIGIVAYRIRG 279
>gi|254562167|ref|YP_003069262.1| hypothetical protein METDI3773 [Methylobacterium extorquens DM4]
gi|254269445|emb|CAX25411.1| conserved hypothetical protein, DUF218; putative membrane protein
precursor [Methylobacterium extorquens DM4]
Length = 265
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 16/231 (6%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ I ++ ++ F+ L G + L L+ + IV+LG
Sbjct: 35 GRGIGRVLTIASFVGLLV-AGLSPLSAWTLAPLENRFPSFT---DDGTPVTGIVVLGGTV 90
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVY 134
+I +I + ++ R L + ++ SGG + ++E+ +
Sbjct: 91 EADTSIGRDQITVN-EAGERAIALADLARRY----PQARLVFSGGAGSTREDAVSEAEIV 145
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ GV R+ + LE QS +T +NA FS+ M++ G+ +LV+SA+H+ RS F+
Sbjct: 146 SRYADTLGVPRNRLILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWHMPRSMGCFRK 205
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLT-----ELALKEYIGILIAYYRG 240
G + A DY + A+F T ++ +KE+IG++ G
Sbjct: 206 AGFDVTAYPVDYRTNWPRDAYRLASFASTGLGELDIGVKEWIGMIAYRLTG 256
>gi|291533114|emb|CBL06227.1| Uncharacterized conserved protein [Megamonas hypermegale ART12/1]
Length = 255
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 58/243 (23%), Positives = 107/243 (44%), Gaps = 16/243 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L +F I YW + I+ + +S LLF + I L+K L+ YQ +
Sbjct: 21 LLILFNIYLYW----KKIKGKYILSMITLLFYLLSTNFIAYHLVKPLENFYQNKTIEQLK 76
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ ++I++LG G + I + S +R+ MRL K + II+SGG
Sbjct: 77 QDKNDVIIMLGGGAINVADIDG-EGQVSGYVANRMITVMRLQK-----ELDIPIILSGGK 130
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ E+ + GV + LE QS +T +N Q S +++ ++++S
Sbjct: 131 VFEDTGREADIEKRIFEGMGVNSQALILENQSRNTVENVQNSKVIMEEYNFTKPLVITSG 190
Query: 183 YHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIA 236
+HL R+ F I +DY + + ++ +P + + + +A++EY+GIL
Sbjct: 191 FHLLRAMEIFAREEIEATPYVADYQMSDELVFSIFNFLPNNGSLNTSCMAIREYLGILAL 250
Query: 237 YYR 239
+
Sbjct: 251 KLK 253
>gi|152969504|ref|YP_001334613.1| hypothetical protein KPN_00947 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238893976|ref|YP_002918710.1| hypothetical protein KP1_1920 [Klebsiella pneumoniae NTUH-K2044]
gi|262040981|ref|ZP_06014203.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|150954353|gb|ABR76383.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238546292|dbj|BAH62643.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259041675|gb|EEW42724.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 259
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 22/211 (10%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWK--KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
+ LLK ++ +Y P W+ + N +V+LG G T P A S R
Sbjct: 56 QPVADSLLKPIEDTY------PTWRGEQPVNYVVVLGGGYTWNPE-WAPSSNLINNSLPR 108
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ E +RL+++ + +I +G + + ++ + GV R DI + + D
Sbjct: 109 LTEGIRLWQA----NPGSKMIFTGAAAKTNPVSTAEAGARVAESLGVPRSDIIVLDRPKD 164
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAY 210
T + A + + +LV+SA HL R+ ++F+H G++ + ++ LN +
Sbjct: 165 TEEEALAVK---RAIGDAPFLLVTSASHLPRAMIFFRHAGLDPLPAPANQLAVTSPLNPW 221
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYRGN 241
IP ++ E +G + + +G+
Sbjct: 222 ERAIPSPVWLMHSDRVGYETLGRVWQWLKGS 252
>gi|283784746|ref|YP_003364611.1| hypothetical protein ROD_09881 [Citrobacter rodentium ICC168]
gi|282948200|emb|CBG87767.1| putative exported protein [Citrobacter rodentium ICC168]
Length = 255
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 84/208 (40%), Gaps = 18/208 (8%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
+ LL+ ++ Y + Q + + IV+LG G T P A S R+
Sbjct: 56 QPVADGLLRPIETRYP----TWQATQKVDYIVVLGGGYTWNP-QWAPSSNLLNNSLPRLN 110
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
E +RL+++ + +I +G + ++ + GV R DI + + DT
Sbjct: 111 EGIRLWRA----NPGAKLIFTGARALTNPVSTAEAGARVAESLGVPRSDIIVLDRPKDTE 166
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYS 212
+ A I +LV+SA HL R+ ++FQ G + + ++ LN +
Sbjct: 167 EEAAAVKQTI---GDTPFLLVTSASHLPRAMIFFQQAGTHPLPAPANQMAIDSPLNPWER 223
Query: 213 IIPLSANFYLTELALKEYIGILIAYYRG 240
IP ++ E +G L + +G
Sbjct: 224 AIPSPYWLMHSDRVGYETLGRLWQWLKG 251
>gi|307306416|ref|ZP_07586160.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
gi|306902258|gb|EFN32855.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
Length = 262
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 62/247 (25%), Positives = 108/247 (43%), Gaps = 16/247 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-WGIIPTILLKHLQFSYQRPLLSPQ 61
L+++ L+V +L + R +S F L F+ + + L+ L+ + RP +P+
Sbjct: 17 LAFLALVVGVLLMLGRFRRSGGTLSAFGLAVLFVTLFTTAGSYFLQILEDRFPRP--TPE 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IIVL G + + Q+ R ET+RL ++ I++SGG
Sbjct: 75 PTELACIIVL--GGAFENVVMASRGGMELNQAAERFVETLRLAQAY----PQARILVSGG 128
Query: 122 DPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
D G+ E + N G+ D + E +S TF+NA+++ ++ + LV
Sbjct: 129 DGSLSGIYEGDAHASENFFGTFGIGSDRLIREGESRTTFENARYTRDLLAKNGLERCALV 188
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGIL 234
+SAYH+ RS F+ G+ +DY + + S N L A KE+ G++
Sbjct: 189 TSAYHMPRSIGLFRANGMEVTPWPTDYRTSGKVRLGFDFTQPSLNAQLATTAAKEWTGLV 248
Query: 235 IAYYRGN 241
Y G
Sbjct: 249 AYYLLGR 255
>gi|74311477|ref|YP_309896.1| hypothetical protein SSON_0922 [Shigella sonnei Ss046]
gi|73854954|gb|AAZ87661.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|323165391|gb|EFZ51178.1| hypothetical protein SS53G_4075 [Shigella sonnei 53G]
Length = 259
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 19/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTAKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
++FQ +N + ++ LN + IP ++ E +G + + +G
Sbjct: 194 MIFFQQEELNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|27380091|ref|NP_771620.1| hypothetical protein bll4980 [Bradyrhizobium japonicum USDA 110]
gi|27353245|dbj|BAC50245.1| bll4980 [Bradyrhizobium japonicum USDA 110]
Length = 301
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 97/248 (39%), Gaps = 17/248 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ I +V RK+ + ++L + + + +LL L+ + P P
Sbjct: 53 LVELGILSLVLMLTRFAALGRKLAVTT--LVLLALAAFSPLGNLLLYPLESRF--PKWDP 108
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
IIVL G+ A R + R+ L + + I+ +G
Sbjct: 109 SRGAPDGIIVL--GGSVDTDLSAAHRTPVVASAADRMLAPAELARRF----PNARIVFTG 162
Query: 121 GDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G E+ L G+ ++ + +E S +T++NA F+ ++ G+ +L
Sbjct: 163 GSANLVSTDAKEADYSAPILESLGIPKERLIVERDSRNTWENAVFTKQLVSPKPGERWLL 222
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL-----SANFYLTELALKEYIGI 233
V+SA+H+ R+ F G + +A D+ + T++A++E+IG+
Sbjct: 223 VTSAFHMPRAMGIFHKAGFDVEAYPVDWRMGGRDDLFAFTHIGKEGLGRTDVAMREWIGL 282
Query: 234 LIAYYRGN 241
L G
Sbjct: 283 LTYRVMGR 290
>gi|268590146|ref|ZP_06124367.1| putative membrane protein [Providencia rettgeri DSM 1131]
gi|291314421|gb|EFE54874.1| putative membrane protein [Providencia rettgeri DSM 1131]
Length = 275
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 55/246 (22%), Positives = 101/246 (41%), Gaps = 19/246 (7%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR--PLLS 59
++ +I L++ ++ + + F + ++L + +G + LL + + + L++
Sbjct: 21 IIGFIGLLLLWFTRWQRCGKA--FTTLSLVLITLLGLQPVSDTLLAPAEKQFNKRYELIT 78
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+D IV+LG G T P + S R+ E +RLY +I +
Sbjct: 79 ENPPQDVRYIVVLGGGFTYNPDWSPSSNLLN-NSLPRVTEGVRLY----LKHPGSKLIFT 133
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG ++ + V GV D T+ DT + A +I +LV
Sbjct: 134 GGKASS-PISSAEVAAQVAQSLGVPAQDTIPLTEPKDTQEEAYEVEKII---GKSPFLLV 189
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGI 233
+SA HL R+ F G+N + ++ L N + IP S F +E A E++G
Sbjct: 190 TSANHLPRAMTMFTQRGMNPFPAPANQLVITSEINPWEKYIPSSYYFGHSERAWYEFLGT 249
Query: 234 LIAYYR 239
L + +
Sbjct: 250 LWWHLK 255
>gi|33596348|ref|NP_883991.1| hypothetical protein BPP1716 [Bordetella parapertussis 12822]
gi|33602366|ref|NP_889926.1| hypothetical protein BB3392 [Bordetella bronchiseptica RB50]
gi|33566117|emb|CAE37017.1| conserved hypothetical membrane protein [Bordetella parapertussis]
gi|33576805|emb|CAE33884.1| conserved hypothetical membrane protein [Bordetella bronchiseptica
RB50]
Length = 254
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 91/228 (39%), Gaps = 12/228 (5%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+RK L + W + T L + P L P + IV+LG G T
Sbjct: 31 RLRKTGAALIAGGLLWALAWSLPATSLWLGGALESRYPHLPPDQSPTADAIVVLG-GNTA 89
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ R+ L+++ + +++SGG + ++E+ ++
Sbjct: 90 NGRANWFLPYDKETAVVRVDTATELFQAGR----APKVVLSGGALEG-DISEARGMAYRM 144
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ GV + LE S T++NA + ++ + ++LV+SA H+ R+ F G+
Sbjct: 145 RQHGVPESALILENASRTTYENAALTEDTLRQHGIQKVLLVTSALHMPRAMAAFSKQGVQ 204
Query: 199 TKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
A+ + + +P +F + +KEY G+ + + RG
Sbjct: 205 AIAAPAPPQIVAPADGSLSPWLPDQRSFDASRSIIKEYAGLFVYWLRG 252
>gi|188582432|ref|YP_001925877.1| hypothetical protein Mpop_3190 [Methylobacterium populi BJ001]
gi|179345930|gb|ACB81342.1| protein of unknown function DUF218 [Methylobacterium populi BJ001]
Length = 278
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 50/232 (21%), Positives = 98/232 (42%), Gaps = 16/232 (6%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + +I F+ L + G + +L L+ + ++ IV+LG
Sbjct: 47 FGRGVGRILACVGFLGLLA-AGLSPLSAWVLGPLENRFPAFA---DDERPVAGIVVLGGA 102
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIV 133
+I +I + + R L + ++ SGG + ++E+ +
Sbjct: 103 VEADTSIGRNQITVN-DAGEREIALADLARRF----PQARLVFSGGAGSLREDAVSEAEI 157
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ GV R+ + LE QS +T +NA FS+ M++ G+ +LV+SA+H+ R+ F+
Sbjct: 158 VSRYADTLGVPRNRLILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWHMPRAVGCFR 217
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYL-----TELALKEYIGILIAYYRG 240
G + A DY + A+F ++ +KE+IG++ G
Sbjct: 218 RAGFDVTAYPVDYRTNWPRDATRFASFASDGLGELDIGVKEWIGLIAYKLAG 269
>gi|307150072|ref|YP_003885456.1| hypothetical protein Cyan7822_0130 [Cyanothece sp. PCC 7822]
gi|306980300|gb|ADN12181.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7822]
Length = 278
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 62/270 (22%), Positives = 111/270 (41%), Gaps = 43/270 (15%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + L++S + F ++ +++ G + L++ L++ PQ
Sbjct: 18 LTCVLLVISLILWWKRPAWVPFPITLALIIILVAGNEWVSNGLIQSLEWQ-----NIPQN 72
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ I++LG G T + P ++ + Q R+ +LY+ K II SGG
Sbjct: 73 IPNAEAIIVLG-GATKSASFPRPMVDLNEQG-DRVVYAAKLYQDHK----APLIIASGGR 126
Query: 123 PQKHGL------------------AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
+ G ES L GV I ++ SL+T++N
Sbjct: 127 IKWGGQQVTDKLSGVGNSFRTQQQPESADIATLLTLMGVPPSAILQDSTSLNTYENVVNV 186
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY-------------- 210
++ K ++LV+SA H+ RS L F+ GI+ + +D+L +
Sbjct: 187 KKILNEKGIKRVLLVTSALHMPRSLLIFKKQGIDVIPAPTDFLVSQPELEQSDLSVETIM 246
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYRG 240
++IP + T ALKEYIG++I +G
Sbjct: 247 LNLIPDAGRLEGTTKALKEYIGMVIYRLKG 276
>gi|146341164|ref|YP_001206212.1| hypothetical protein BRADO4236 [Bradyrhizobium sp. ORS278]
gi|146193970|emb|CAL77987.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 262
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 56/246 (22%), Positives = 101/246 (41%), Gaps = 17/246 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ L + I+ R ++ MLL + +G + +++L L+ + P P
Sbjct: 20 IALGLLGAILMLTRFAVLGRR---LVASAMLLLAIVGLTPLGSLMLYPLESRF--PKWDP 74
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEP-SFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
IIVL G + + AI P + R+ + L + + ++ +
Sbjct: 75 AKGAPDGIIVLGG---PVDSDLSAIYGMPVTVAGADRVIQAAVLARRY----PNARVLFT 127
Query: 120 GGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
GG E+ V L GV + + LE QS +T++NA FS +MI G+ +
Sbjct: 128 GGSANLIATDAKEADVGAEILESLGVAKQRLLLERQSRNTYENAIFSKAMIAPKPGERWL 187
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP--LSANFYLTELALKEYIGILI 235
LV+SAYH+ RS F+ G + D+ ++A++E++G++
Sbjct: 188 LVTSAYHMPRSVGLFRKAGFPVEPYPVDWRVGRVLDFDGVSLQGLRRADIAVREWVGLVA 247
Query: 236 AYYRGN 241
RG
Sbjct: 248 YRLRGR 253
>gi|293604449|ref|ZP_06686856.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292817326|gb|EFF76400.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 254
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 96/239 (40%), Gaps = 12/239 (5%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
L++ L +RK L + W + T L + P L+P +
Sbjct: 20 LVIIGLALGWFRLRKTGAAIIAAGLLWALAWSLPVTSLWLGGALENRYPHLAPADSPTAD 79
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG T + + + R+ +LY + + +++SGG +
Sbjct: 80 AIVVLGGNTANGRANWFLPYDKD-TAVVRVDTAAQLYLAGR----APKVLLSGGALEG-D 133
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++E+ + + + GV + LE S T++NA + +K+ ++LV+SA H+ R
Sbjct: 134 VSEARGMAHAIRQQGVPESALILENSSRTTYENAALTEDALKSRGITKVLLVTSALHMPR 193
Query: 188 SQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ F G+ A+ + + +P F + +KEY G+ + + RG
Sbjct: 194 AMAAFSKQGVEAIAAPAPPQIVAPADGSLSPWVPDQRTFDASRSIIKEYAGLFVYWLRG 252
>gi|160902984|ref|YP_001568565.1| hypothetical protein Pmob_1541 [Petrotoga mobilis SJ95]
gi|160360628|gb|ABX32242.1| protein of unknown function DUF218 [Petrotoga mobilis SJ95]
Length = 214
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSP-QWKKDGNIIVLLGNGTTIIPTIPA-IRIE 88
++ G I++ L+ Y +S ++ +IV+LG G IIP P E
Sbjct: 4 IVIYIFSSGWFAKIIVLPLENRYPPVNVSQLDDTQEKGVIVVLGGG--IIPETPREGSGE 61
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
S + R++E LYK ++ I+++GG + E+ + +LL+ GV+ +DI
Sbjct: 62 LSDSAMKRVYEGFLLYK-----NLQIPIVVTGGKLLGTEIPEAQIMKEELLKMGVKPNDI 116
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYL 207
+E + +T QNA+F+ +++++ + + I L++SA HL R+ YF+ + I+ +DY
Sbjct: 117 YVEPLAKNTKQNAEFTLTLLESDEVQKIYLITSAIHLPRAMNYFKSYTNIDVVPVPTDYK 176
Query: 208 NA-----YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +Y +P T A EY+G++ G
Sbjct: 177 ISREELKWYDFLPDMRFLEATSSAWHEYLGLVKFKISG 214
>gi|218531176|ref|YP_002421992.1| hypothetical protein Mchl_3226 [Methylobacterium chloromethanicum
CM4]
gi|218523479|gb|ACK84064.1| protein of unknown function DUF218 [Methylobacterium
chloromethanicum CM4]
Length = 265
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ I ++ ++ F+ L G + L L+ + IV+LG
Sbjct: 35 GRGIGRVLTVAGFVGLLV-AGLSPLSAWTLAPLENRFPSFT---DDGTPVTGIVVLGGTV 90
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVY 134
+I +I + ++ R L + ++ SGG + ++E+ +
Sbjct: 91 EADTSIGRDQITVN-EAGERAIALADLARRY----PQARLVFSGGSGSTREDAVSEAEIV 145
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ GV R+ + LE QS +T +NA FS+ M++ G+ +LV+SA+H+ RS F+
Sbjct: 146 SRYADTLGVPRNRLILEQQSRNTHENAVFSARMVQPKPGERWLLVTSAWHMPRSMGCFRK 205
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYL-----TELALKEYIGILIAYYRG 240
G + A DY + A+F ++ +KE+IG++ G
Sbjct: 206 AGFDVTAYPVDYRTNWPRDAYRLASFASDGLGELDIGVKEWIGMIAYRLTG 256
>gi|241207055|ref|YP_002978151.1| hypothetical protein Rleg_4373 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860945|gb|ACS58612.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 262
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 100/263 (38%), Gaps = 35/263 (13%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIP--------------------TIL 45
+FLI + Q + FF+ LL + W I+ +L
Sbjct: 1 MFLISKLVWIFAQPLSLAFFLVFLALLAGLLRWRILSILGAAGSALILFVTLYTTAGNLL 60
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
++ L+ + +P P + +++LG G IE + R E +RL +
Sbjct: 61 MQGLEQRFAKPAADPDSLQ---CMIVLGGGFENEVNTARHGIEFNG-GADRFIEALRLAQ 116
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQNAQF 163
Q I++SGGD G+ E GV RD + E QS TF+NA
Sbjct: 117 KFPQS----RILVSGGDGSMSGIYEGDAAASERFFPLFGVGRDRLIEERQSRTTFENAVN 172
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSA 218
+ + + N +L++S +H+ RS F+ GI+ +DY +
Sbjct: 173 TKEFLASQGLSNCLLITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRLGLDFTQPNL 232
Query: 219 NFYLTELALKEYIGILIAYYRGN 241
N A++E+ G++ Y G
Sbjct: 233 NAQNMATAIREWYGLVGYYLAGR 255
>gi|218509953|ref|ZP_03507831.1| hypothetical protein RetlB5_22095 [Rhizobium etli Brasil 5]
Length = 262
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 54/263 (20%), Positives = 100/263 (38%), Gaps = 35/263 (13%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIP--------------------TIL 45
+FLI + CQ + F + F L+ + W + +L
Sbjct: 1 MFLISKLVWIFCQPLSLAFLLVFFALVAGLLRWRALSIVAATASALILFVTLYTTAGNLL 60
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
++ L+ + +P P+ + +++LG IE + R E +RL +
Sbjct: 61 MQGLEQRFAKPAADPENLQ---CMIVLGGAFENEVNTARHGIEFNG-GADRFVEALRLAQ 116
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQNAQF 163
I++SGGD G+ E G+ R+ + ETQS TF+NA
Sbjct: 117 KF----PDSRILVSGGDGSMSGIYEGDAAASERFFPLFGIGRERLIEETQSRTTFENAVN 172
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSA 218
+ + + + +L++S +H+ RS F+ GI+ +DY +
Sbjct: 173 TREFLASQGLSHCLLITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRPGLDFTQPNL 232
Query: 219 NFYLTELALKEYIGILIAYYRGN 241
N A++E+ G++ Y G
Sbjct: 233 NAQNMATAIREWYGLVGYYLAGR 255
>gi|323493229|ref|ZP_08098358.1| hypothetical protein VIBR0546_19494 [Vibrio brasiliensis LMG 20546]
gi|323312495|gb|EGA65630.1| hypothetical protein VIBR0546_19494 [Vibrio brasiliensis LMG 20546]
Length = 267
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 57/250 (22%), Positives = 108/250 (43%), Gaps = 24/250 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQR 55
M L + LI+ + L+ + CF++LFSFIG + + + LL L+ Y
Sbjct: 13 MPLPAM-LIIGLFGLMLIMFTRKQKTGCFVVLFSFIGIFLIAFQPVSSRLLMPLERQYSA 71
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
+ + +++LG+G + IP E S R+ E +R+ +
Sbjct: 72 FF---PVDEPIDYVMVLGSGHVVDDKIPPTS-ELSRTGLMRLSEGIRILRIY----PGAK 123
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SG ++ + + L GV + DI L + DT++ A+ +++ + K
Sbjct: 124 LILSGYAAGSE-VSNARMMAKVALALGVAKSDIILLETAKDTWEEARQAAAFV---STKK 179
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKE 229
+++V+SA H+KR+ F G+ A+ ++YL + P + TE E
Sbjct: 180 LVVVTSASHMKRALNEFHSAGLKPYAAPTNYLAHDNVTQFWAKYTPKAVYLEQTERYWHE 239
Query: 230 YIGILIAYYR 239
+G + R
Sbjct: 240 TLGRIWQTLR 249
>gi|323499476|ref|ZP_08104447.1| hypothetical protein VISI1226_09254 [Vibrio sinaloensis DSM 21326]
gi|323315463|gb|EGA68503.1| hypothetical protein VISI1226_09254 [Vibrio sinaloensis DSM 21326]
Length = 267
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
CF++LFSFIG + + T LL ++ Y + + +++LG+G +
Sbjct: 38 GCFIVLFSFIGIFLVAFQPVSTRLLMPIERQYSAFF---PVDESIDYVMVLGSGHVVDDE 94
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
IP E S R+ E +R+ + +I+SG ++ + + L
Sbjct: 95 IPPTS-ELSRTGLMRLAEGIRIMRIY----PGSKLILSGYAGGSE-ISNARMMAKVALAL 148
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + DI L + DT++ A+ +++ +K+ + +++V+SA H++R+ F G+
Sbjct: 149 GVSKSDIVLLETAKDTWEEARQAAAFVKH---RKLVVVTSASHMQRALNEFHSAGLKPYP 205
Query: 202 SCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ ++YL A+ P + TE E +G + R
Sbjct: 206 APTNYLAHDNVTQAWTKYTPRAVYLEQTERYWHETLGKIWQTLR 249
>gi|330445713|ref|ZP_08309365.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489904|dbj|GAA03862.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 275
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 23/244 (9%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQ 61
LI+ LL + ++ ++ FSF+G + + T LL+ L+ ++ + S
Sbjct: 18 LLIIGVIGLLVLWFSRKTKLASGIIAFSFLGIFAVSFQPVSTSLLRPLEQEHRAFVGSS- 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + +++LGNG I T P I E S + R+ E +R+Y+ M I+SG
Sbjct: 77 --KPIDFVMVLGNGHVIDKTFP-ITSELSRTALMRLAEGIRIYRMYPGSKM----ILSGY 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++ + + L GV + DI L + DT++ A ++S++ KN++LV+S
Sbjct: 130 SG-GTTMSHARMLAKVALALGVSKSDILLLETAKDTWEEAHQAASVV---GSKNLVLVTS 185
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILI 235
A H+ R+ F G++ + ++++ + P S TE E +G+L
Sbjct: 186 ASHMSRALNEFHQAGLDPIPAPTNFMATNKIKQPWVRYAPSSQFLNQTERYWHEKLGMLW 245
Query: 236 AYYR 239
R
Sbjct: 246 QDLR 249
>gi|237730883|ref|ZP_04561364.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226906422|gb|EEH92340.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 254
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 52/249 (20%), Positives = 97/249 (38%), Gaps = 20/249 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+ L I + + L +K +S L + + LLK ++ SY
Sbjct: 16 LPLMLIIMGIGLALLWFSRFQKTGKVCISLSWLALLLLSLQPVADSLLKPIEDSYP---- 71
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ Q + IV+LG G T P S S R+ E +RL+++ + +I
Sbjct: 72 TWQDTQKVEYIVVLGGGYTWNPQWAPSSNLIS-NSLPRLNEGIRLWRA----NPGSKLIF 126
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+G + + ++ + GV DI + DT + A I +L
Sbjct: 127 TGAAAKSNNVSTAEAGARVAQSLGVPPGDIITLDKPKDTEEEAAAVKQAI---GSAPFLL 183
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIG 232
V+SA HL R+ ++FQ G++ + ++ LN + IP ++ E +G
Sbjct: 184 VTSASHLPRAMIFFQQAGLHPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLG 243
Query: 233 ILIAYYRGN 241
+ + +G+
Sbjct: 244 RIWQWLKGS 252
>gi|33593317|ref|NP_880961.1| hypothetical protein BP2323 [Bordetella pertussis Tohama I]
gi|33572673|emb|CAE42596.1| conserved hypothetical membrane protein [Bordetella pertussis
Tohama I]
gi|332382726|gb|AEE67573.1| hypothetical protein BPTD_2282 [Bordetella pertussis CS]
Length = 254
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 91/228 (39%), Gaps = 12/228 (5%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+RK L + W + T L + P L P + IV+LG G T
Sbjct: 31 RLRKTGAALIAGGLLWALAWSLPATSLWLGGALESRYPHLPPDQSPTADAIVVLG-GNTA 89
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ R+ L+++ + +++SGG + ++E+ ++
Sbjct: 90 NGRANWFLPYDKETAVVRVDTATELFQAGR----ASKVVLSGGALEG-DISEARGMAYRM 144
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ GV + LE S T++NA + ++ + ++LV+SA H+ R+ F G+
Sbjct: 145 RQHGVPESALILENASRTTYENAALTEDTLRQHGIQKVLLVTSALHMPRAMAAFSKQGVQ 204
Query: 199 TKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
A+ + + +P +F + +KEY G+ + + RG
Sbjct: 205 AIAAPAPPQIVAPADGSLSPWLPDQRSFDASRSIIKEYAGLFVYWLRG 252
>gi|254282506|ref|ZP_04957474.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
gi|219678709|gb|EED35058.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
Length = 253
Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 22/225 (9%)
Query: 30 MLLFSFIGWGII--------PTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
L+SF+ + ++ L++ L+ Y P +P+ +IV+LG I
Sbjct: 37 AFLWSFLAFALVYFCSTEFGANTLMEPLEARY--PAFAPEELPKAEVIVVLGG--AIDGE 92
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
R + + R+ LY M +++SGG P E+ + KL
Sbjct: 93 SRFGRGGDATHAADRLLTAAELYA----RKMAPYMLLSGGAPSGQ-RPEADLMAEKLEFM 147
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV R + LE S TF NA S+ M+ ++I+LV+S H++R+ F+ FG+ A
Sbjct: 148 GVPRSAMLLEPASRTTFDNAVNSADMLNARNYRHILLVTSGAHMRRAVALFEAFGLQVTA 207
Query: 202 SCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILIAYYRGN 241
+D+ Y +P + + A+ E++G + G
Sbjct: 208 VATDHQIPRYAPTVPGWLPTADRLARSTRAVHEWVGYWVYDLTGK 252
>gi|269139507|ref|YP_003296208.1| hypothetical protein ETAE_2162 [Edwardsiella tarda EIB202]
gi|267985168|gb|ACY84997.1| hypothetical protein ETAE_2162 [Edwardsiella tarda EIB202]
gi|304559396|gb|ADM42060.1| Membrane Protein [Edwardsiella tarda FL6-60]
Length = 265
Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 90/238 (37%), Gaps = 19/238 (7%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
V W Q K+ +S L + + LL L+ Y Q +
Sbjct: 28 VLLWFTRRQRTGKVL-VSFAWLGILLLSMQPLADRLLAPLEDRYPTLNGPHQ----ARYV 82
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG G T P A S R+ E +R + +I++G Q + ++
Sbjct: 83 VVLGGGYTYNP-QWAPSSNLIGNSLPRVTEGIR----QLALNPQARLIVTGAAAQGNPVS 137
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+ V GV+ I + DT Q AQ + ++ N +ILV+SA H+ R+
Sbjct: 138 SAEVAARVARSLGVDEQRIIVLDSPRDTGQEAQAVADVVGNA---PLILVTSANHMPRAL 194
Query: 190 LYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+F H G++ + ++ LN + +P +E A E +G L G
Sbjct: 195 GFFHHQGLDPIPAPANQLAIASPLNPWERWLPSPLYLGHSERAWYETLGRLWQGLTGQ 252
>gi|209551623|ref|YP_002283540.1| hypothetical protein Rleg2_4052 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537379|gb|ACI57314.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 262
Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 55/263 (20%), Positives = 101/263 (38%), Gaps = 35/263 (13%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIP--------------------TIL 45
+F+I + Q + FF+ L+ + W + ++
Sbjct: 1 MFVISKLVWIFAQPLSLAFFLVFLALVAGLLRWRTLSMLSATGSALILFVTLYTTAGNLM 60
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
++ L+ + +P P + +++LG G IE + + R E +RL +
Sbjct: 61 MQGLEQRFAKPAADPDSLQ---CMIVLGGGFENEVNTARHGIEFN-AAADRFVEALRLAQ 116
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQNAQF 163
Q I++SGGD G+ E GV +D + E QS TF+NA
Sbjct: 117 KFPQS----RILVSGGDGSLSGIYEGDAAASERFFPLFGVGKDRLIEERQSRTTFENAVN 172
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSA 218
+ + + N +L++S +H+ RS F+ GI+ +DY A +
Sbjct: 173 TKEFLASQGLANCLLITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGRVKAGLDFTQPNL 232
Query: 219 NFYLTELALKEYIGILIAYYRGN 241
N A++E+ G++ Y G
Sbjct: 233 NAQNMATAIREWYGLVGYYLAGR 255
>gi|317064197|ref|ZP_07928682.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
gi|313689873|gb|EFS26708.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
Length = 241
Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 17/246 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ IF+ + ++L + I+ F + + L L+ Y +S
Sbjct: 5 LPFILIFIYIGLKNILNRRIKSGFLLIFIGVGTYLGTSDFFVDRFLFKLESEYST--IST 62
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++G++ +LLG G A PS + +RI +T + Y + I ISG
Sbjct: 63 VKLQEGDVYILLGGGIV---PNSAGGNVPSEGANARIIKTAQFYNKYPK-----KIYISG 114
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P ++ +ES VY +L+ G+ ++I +E +S +T +NA + M++ + K +L++
Sbjct: 115 GSPLQNKESESSVYKRELVALGIPSENIVIEEKSRNTRENALYIRKMMEGSKEKKAVLIT 174
Query: 181 SAYHLKRSQLYFQ--HFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGI 233
SA+H+ RS F G+ + D++ ++ IP NF + LKEYIG+
Sbjct: 175 SAFHIPRSVKTFDDGEGGLIFYPAPCDFMAKKEAENFFDYIPEYTNFKKLGILLKEYIGM 234
Query: 234 LIAYYR 239
L R
Sbjct: 235 LYYRIR 240
>gi|16330498|ref|NP_441226.1| hypothetical protein sll1606 [Synechocystis sp. PCC 6803]
gi|1652989|dbj|BAA17906.1| sll1606 [Synechocystis sp. PCC 6803]
Length = 262
Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 25/219 (11%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
+ LL+ L++ Y PQ +IV+LG G + ++ R
Sbjct: 52 ANSWVSDALLRTLEYQYLPMEDFPQ----APVIVVLGGGLYQA--TYPRQFPEVAEAGDR 105
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGL---AESIVYNNKLLESGVERDDIKLETQ 153
+ ++Y+ K II +GG G +E+ L V R+ I E +
Sbjct: 106 VIYGAQIYQEGKAPY----IITTGGRIPWLGTVATSEAEDMALLLQRLDVPREAIIKEEK 161
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL------ 207
SL+T QNA F+ +++ IILV+S YH+ R++ F+ GI + +D+L
Sbjct: 162 SLNTRQNAVFTQKILQQRGINTIILVTSGYHMPRAKRVFEKLGIIVIPAATDFLSQPLGR 221
Query: 208 ------NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
N ++P + + +T +ALKEY+G++I +G
Sbjct: 222 NNFNLANVILGLMPDAKSLQMTTMALKEYLGLVIYKLQG 260
>gi|110633719|ref|YP_673927.1| hypothetical protein Meso_1366 [Mesorhizobium sp. BNC1]
gi|110284703|gb|ABG62762.1| protein of unknown function DUF218 [Chelativorans sp. BNC1]
Length = 266
Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 16/234 (6%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + F + F L+ + GW +LL L+ + RP +PQ + I++LG
Sbjct: 32 FRWRKLSITFGVFAF-LVVALAGWTTFGAMLLHPLESRFARPDPAPQ---HVDGIIVLGG 87
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE--SI 132
G + E + S R E L + + +I+SGG E +
Sbjct: 88 GFEGAVNLARGGYELN-DSGDRFVEAAILARRYPE----ARLIVSGGSGSVFLPGEGDAD 142
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
L GV + I+L+ +S DTF+NA+FS SM + + +LV+SA+H+ R+ F
Sbjct: 143 TAPRLLTALGVAPERIELDNRSRDTFENARFSMSMAEPGPDETWLLVTSAFHMPRAVGAF 202
Query: 193 QHFGINTKASCSDYLNAYYSIIPLS-----ANFYLTELALKEYIGILIAYYRGN 241
+ G +DY L+ + T + ++E++G+L G
Sbjct: 203 RQAGFPILPWPADYKTTGREKPGLTDDNVLDSLRNTSIGIREWVGLLAYRMVGR 256
>gi|116249878|ref|YP_765716.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254526|emb|CAK05600.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 262
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 99/263 (37%), Gaps = 35/263 (13%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIP--------------------TIL 45
+FLI + Q + FF+ LL + W + +L
Sbjct: 1 MFLISKLVWIFAQPLSLAFFLVFLALLAGLLRWRTLSILGAAGSALILFVTLYTTAGNLL 60
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
++ L+ + +P P + +++LG G IE + R E +RL +
Sbjct: 61 MQGLEQRFAKPAADPDSLQ---CMIVLGGGFENEVNTARHGIEFNG-GADRFIEALRLAQ 116
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQNAQF 163
Q I++SGGD G+ E GV RD + E QS TF+NA
Sbjct: 117 KFPQS----RILVSGGDGSISGIYEGDAAASERFFPLFGVGRDRLIEERQSRTTFENAVN 172
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSA 218
+ + + N +L++S +H+ RS F+ GI+ +DY S
Sbjct: 173 TKEFLASQGLSNCLLITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRLGLDFTQPSL 232
Query: 219 NFYLTELALKEYIGILIAYYRGN 241
N A++E+ G++ Y G
Sbjct: 233 NAQNLATAIREWYGLVGYYLAGR 255
>gi|255019747|ref|ZP_05291824.1| hypothetical protein ACA_2404 [Acidithiobacillus caldus ATCC 51756]
gi|254970815|gb|EET28300.1| hypothetical protein ACA_2404 [Acidithiobacillus caldus ATCC 51756]
Length = 267
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 16/228 (7%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+++ ++ + L+ G+ L+ L+ Y PLL PQ IV+LG G
Sbjct: 36 VRALGWSLLLAAGVGLY-LSATGVGARWLVLPLENRYP-PLLHPQPGV--GAIVVLGGGE 91
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
P + + + R+ +L K I+ SGG P+ E+
Sbjct: 92 VARPPGDGGDMANAR-TLMRLEAAAKLAKQS-----ALPIVTSGGAPRFGAPPEATTMAR 145
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L ES + I +E +S +T NA SS ++ + LV+SA H+ R+ +F+ G
Sbjct: 146 LLRESFAVHNPIWIEGRSFNTAANAFDSSKLLAQKGIHRVYLVTSALHMPRAMAWFRRAG 205
Query: 197 INTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ DY + Y S +P + + A+ EY+G+ +
Sbjct: 206 LDPVPVPCDYRLDRGLTSGYESWLPRAIYLEASSEAIHEYLGLFWLHL 253
>gi|330013999|ref|ZP_08307835.1| hypothetical protein HMPREF9538_05555 [Klebsiella sp. MS 92-3]
gi|328533292|gb|EGF60043.1| hypothetical protein HMPREF9538_05555 [Klebsiella sp. MS 92-3]
Length = 259
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 22/211 (10%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWK--KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
+ LLK ++ +Y P W+ + N +V+LG G T P A S R
Sbjct: 56 QPVADSLLKPIEDTY------PTWRGEQPVNYVVVLGGGYTWNPE-WAPSSNLINNSLPR 108
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ E +RL+++ + +I +G + + ++ + GV R DI + + D
Sbjct: 109 LTEGIRLWQA----NPGSKMIFTGAAAKTNPVSTAEAGARVAESLGVPRSDIIVLGRPKD 164
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAY 210
T + A + + +LV+SA HL R+ ++F+H G++ + ++ LN +
Sbjct: 165 TEEEALAVK---RAIGDAPFLLVTSASHLPRAMIFFRHAGLDPLPAPANQLAVTSPLNPW 221
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYRGN 241
IP ++ E +G + + +G+
Sbjct: 222 ERAIPSPVWLMHSDRVGYETLGRVWQWLKGS 252
>gi|123441863|ref|YP_001005846.1| hypothetical protein YE1552 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088824|emb|CAL11630.1| putative inner membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 255
Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 57/248 (22%), Positives = 96/248 (38%), Gaps = 20/248 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ ++ W Q K F ++ L I + LL L+ Y
Sbjct: 19 LLIVMGLALILLWFTRWQKSGKTLFTLSWLALL-LISLQPVADRLLLPLEKQYATY---- 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + IV+LG G T P A S R+ E +RLY++ M T
Sbjct: 74 QGNDPVDYIVVLGGGYTFNPN-WAPSANLFSNSLPRVTEGVRLYRAHPNAKMVFT----- 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ + + G+ DI + Q DT + A +S++ K +LV+
Sbjct: 128 SSAGPNSQSSAKTAAQVAESLGIPATDIIVLEQPKDTVEEAAAVASLV---GDKPFLLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGIL 234
SA HL R+ +F G++ + ++ L ++ IP +A +E A E +G+L
Sbjct: 185 SASHLPRAIKFFTAKGLHPIPAPANQLAITTPLHSWERTIPAAAYLGHSERAWYETLGLL 244
Query: 235 IAYYRGNR 242
GN+
Sbjct: 245 WQKLTGNK 252
>gi|146311096|ref|YP_001176170.1| hypothetical protein Ent638_1439 [Enterobacter sp. 638]
gi|145317972|gb|ABP60119.1| protein of unknown function DUF218 [Enterobacter sp. 638]
Length = 259
Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 94/235 (40%), Gaps = 19/235 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K + +++ + + LL+ ++ Y + Q KK + IV+L
Sbjct: 31 WLTRFQKTAKTVMTAAWLM-LLLLSLQPVADGLLRPIEDKYP----TWQGKKKVDYIVVL 85
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T P A S R+ E +RL+ + + +I +G + + ++ +
Sbjct: 86 GGGYTWDPN-WAPSSNLINNSLPRLNEGIRLWLA----NPGSKMIFTGAPAKTNPVSTAE 140
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
GV R I DT + A I N +LV+SA HL R+ ++F
Sbjct: 141 AGARVAESLGVPRSAIITLDSPKDTEEEAAAVKQAIGNA---PFLLVTSASHLPRAMIFF 197
Query: 193 QHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+H G++ + ++ LN + IP ++ E +G L + +G+
Sbjct: 198 EHAGLHPLPAPANQLAVDAPLNPWERAIPSPVWLMHSDRVGYETLGRLWQWLKGS 252
>gi|119945885|ref|YP_943565.1| hypothetical protein Ping_2225 [Psychromonas ingrahamii 37]
gi|119864489|gb|ABM03966.1| hypothetical protein DUF218 [Psychromonas ingrahamii 37]
Length = 254
Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
Q + K + F+LLF + + + L++ L+ Y P++ P ++ I++LG+G
Sbjct: 35 RQKLAKFNLLVSFILLF-LLSFMPVSEQLVQPLERQYP-PVMQPA--QNFKYILVLGSGG 90
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
P++P + + S + SR E +RLY + + + T+++SGG+ + +++
Sbjct: 91 IADPSLP-VTGQLSAVALSRFVEALRLYHA----NPNATLVVSGGNFGDIK-SHALLMQE 144
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ + +D+I +LDT A+ S +IK G++ +LV+SA H+ RS F+ +
Sbjct: 145 LAMAMNIPKDNIIRLDNTLDTDDEAKQMSKIIK---GQSAVLVTSATHMPRSMGLFKQYN 201
Query: 197 INTKASCSDYL-------NAYYSIIPLSANFYLTELALKEYIGIL 234
+ +DYL YY IP S T++A EY+G L
Sbjct: 202 AFPTPAPADYLAKKREGETPYYYYIPSSNYLDKTKVAWHEYLGKL 246
>gi|332283765|ref|YP_004415676.1| membrane protein [Pusillimonas sp. T7-7]
gi|330427718|gb|AEC19052.1| membrane protein [Pusillimonas sp. T7-7]
Length = 254
Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 16/243 (6%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
I L+++ L +RK F+ L + W + + L + P
Sbjct: 18 IALLLAAVVLFMVRLRKTAFVIAVAGLSWALFWSLPASSLWAGGRLEQLHPYEQAANAPT 77
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
IV+LG G T + +RI + LYK+ + +I+ G +
Sbjct: 78 AQAIVVLG-GHTANGRQNWFEPYDKATAIARIDKAANLYKAQR-----APLIVVSGAALE 131
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
++E+ + N L + + I +E++S T +NA +++ ++ +NI+LV+SA H+
Sbjct: 132 GNVSEAQIMANALKQHDIPESAIIMESRSFTTHENAIYTAETLRQRHIQNILLVTSALHM 191
Query: 186 KRSQLYFQHFGINT--------KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R+ F+ GI D + P + + +KEY+G+L+ +
Sbjct: 192 PRAMAVFKKQGIAAIAAPLAPQIVVPDD--PGFSFWQPDMRSLAASRSIVKEYVGLLVYW 249
Query: 238 YRG 240
RG
Sbjct: 250 VRG 252
>gi|118591094|ref|ZP_01548493.1| hypothetical protein SIAM614_15747 [Stappia aggregata IAM 12614]
gi|118436170|gb|EAV42812.1| hypothetical protein SIAM614_15747 [Stappia aggregata IAM 12614]
Length = 265
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 54/249 (21%), Positives = 98/249 (39%), Gaps = 19/249 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L L++S + R + F L+ + L+ L+ +QRP
Sbjct: 20 IVLMAAGLLLSLSARWRRRGRLLTFAGFAGLVVC--AFSPAANWLIVPLEDRFQRPATL- 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ + I++LG G S R+ T RL K+ II +G
Sbjct: 77 ---ENYDGIIILG-GAVDTVVTGVRGDTALTMSAERVTITARLAKAL----PAAKIIHTG 128
Query: 121 GDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G E+ + G+ + I LE QS +T+QNA ++ +++ G+ +L
Sbjct: 129 GQGMIVSSQATEAEGAARLFRDFGIAPERIILEDQSQNTWQNAVYAKKIVQPQPGQRWLL 188
Query: 179 VSSAYHLKRSQLYFQHFGIN-TKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIG 232
V+SAYH+ RS F+ G A D+ + S ++A +E++G
Sbjct: 189 VTSAYHMPRSMGVFEKAGWTGVTAYPVDFRTRGPQDSMLGFDGASKGLRRFDIAFREWVG 248
Query: 233 ILIAYYRGN 241
+ + G
Sbjct: 249 LAVYKLLGR 257
>gi|257469971|ref|ZP_05634063.1| hypothetical protein FulcA4_11568 [Fusobacterium ulcerans ATCC
49185]
Length = 252
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 17/246 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ IF+ + ++L + I+ F + + L L+ Y +S
Sbjct: 16 LPFILIFIYIGLKNILNRRIKSGFLLIFIGVGTYLGTSDFFVDRFLFKLESEYST--IST 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++G++ +LLG G A PS + +RI +T + Y + I ISG
Sbjct: 74 VKLQEGDVYILLGGGIV---PNSAGGNVPSEGANARIIKTAQFYNKYPK-----KIYISG 125
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P ++ +ES VY +L+ G+ ++I +E +S +T +NA + M++ + K +L++
Sbjct: 126 GSPLQNKESESSVYKRELVALGIPSENIVIEEKSRNTRENALYIRKMMEGSKEKKAVLIT 185
Query: 181 SAYHLKRSQLYFQ--HFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGI 233
SA+H+ RS F G+ + D++ ++ IP NF + LKEYIG+
Sbjct: 186 SAFHIPRSVKTFDDGEGGLIFYPAPCDFMAKKEAENFFDYIPEYTNFKKLGILLKEYIGM 245
Query: 234 LIAYYR 239
L R
Sbjct: 246 LYYRIR 251
>gi|94266695|ref|ZP_01290369.1| Protein of unknown function DUF218 [delta proteobacterium MLMS-1]
gi|93452658|gb|EAT03218.1| Protein of unknown function DUF218 [delta proteobacterium MLMS-1]
Length = 254
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 20/224 (8%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
M + F ++ L L+ + + + IVLLG G +PA
Sbjct: 41 GMVLAVAWLWFWSLPVVADALRLSLEGRFAPQRA--EELPAADFIVLLGGGVR---GVPA 95
Query: 85 IRIEPSFQSY-SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL--AESIVYNNKLLES 141
P + R++ RLY + K II+SGG + HG +E+ LL
Sbjct: 96 DWPYPDLNAAADRVWHAPRLYHADK----APLIIVSGGGKEWHGERGSEAEAMRELLLAF 151
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV I+LE +S T +NA +++ ++ + ++LV+SA H+ RS F+ GIN
Sbjct: 152 GVPDGAIRLEDRSRSTRENALYTAPLVGE---RPVLLVTSAQHMPRSLATFRAVGINAVP 208
Query: 202 SCSDYLNAY-----YSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +D+ ++P + + + + ALKEY+G+L+ RG
Sbjct: 209 APTDFEVIPQPLHSLRLLPDAHSLHQSTSALKEYLGLLVYRLRG 252
>gi|15644422|ref|NP_229474.1| hypothetical protein TM1674 [Thermotoga maritima MSB8]
gi|4982249|gb|AAD36741.1|AE001808_16 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 237
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 48/244 (19%), Positives = 110/244 (45%), Gaps = 20/244 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ +F+++ + F ++ +++ F + + + L L+ + P P
Sbjct: 11 LVTPGLFILLLIVGSFFFKKARWFLLALAAIVYLFSSY-VGEFLFLWPLEKNLDVPATLP 69
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ +IV+LG G S + R+ +++Y+ K I+++G
Sbjct: 70 ----NDAVIVVLGGGVERN---TKAGDNLSDATLRRLLTGVQIYQKTKM-----PILVTG 117
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E+++ + L+ GV + I +E +S +T++NA F+ I ++ IILV+
Sbjct: 118 GSLTGL-RSEAMIMKDYLVSLGVPEEKITVEDRSRNTYENALFTREKIGDV---PIILVT 173
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNA---YYSIIPLSANFYLTELALKEYIGILIAY 237
+ H++R+ F+ F + + + + +P + +FYL A+ E+IG++
Sbjct: 174 DSIHMRRAVFTFKRFFQSVTPYPAGFYFGDPEFVDFLPNATSFYLNSRAIYEWIGLVWYN 233
Query: 238 YRGN 241
+R
Sbjct: 234 FRWR 237
>gi|294140297|ref|YP_003556275.1| hypothetical protein SVI_1526 [Shewanella violacea DSS12]
gi|293326766|dbj|BAJ01497.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 247
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 95/216 (43%), Gaps = 12/216 (5%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
++ M++ F+ + +L L+ Y+ ++ + ++++LG+G A
Sbjct: 39 VLAVAMVILVFLSSSVGSNLLTASLENQYK---VNNKAISADCLVMVLGSGHDDAVPGGA 95
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ + S + +R+ E +R YK K C +I+SG + + L+ G+
Sbjct: 96 V-HKLSTTALARLTEGVRQYKLGK----DCKLIVSGWGGSASKTPHAKIMAEAALQFGIP 150
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
++ I + DT + AQ+ ++ LV+SA H+ RS F G+ +A+ +
Sbjct: 151 KERIITFPLAKDTIEEAQYFKW---DVGNYPFRLVTSASHMPRSMAIFHSQGLRPQAAPT 207
Query: 205 DYLNAYYSIIPL-SANFYLTELALKEYIGILIAYYR 239
D++ L + N ++ A+ EY+G L +
Sbjct: 208 DFITRQGYWWQLDANNLLSSQRAIHEYVGRLWFKLK 243
>gi|86355763|ref|YP_467655.1| hypothetical protein RHE_CH00103 [Rhizobium etli CFN 42]
gi|86279865|gb|ABC88928.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 262
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 55/263 (20%), Positives = 100/263 (38%), Gaps = 35/263 (13%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIP--------------------TIL 45
+FLI + CQ + F + F L+ + W + +L
Sbjct: 1 MFLISKLVWIFCQPLSLAFLLVFFTLIAILLRWRALSILGATASALILFVTLYTTAGNLL 60
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
++ L+ + +P P+ + +++LG IE + R E +RL +
Sbjct: 61 MQGLEQRFAKPAADPENLQ---CVIVLGGAFENEVNTARHGIEFNG-GADRFIEALRLAQ 116
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQNAQF 163
Q I+ISGGD G+ E G+ +D + E QS TF+NA
Sbjct: 117 KFPQS----RILISGGDGSISGIYEGDAAASERFFPLFGIGKDRLIEERQSRTTFENAVN 172
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSA 218
+ + + + +L++S +H+ RS F+ GI+ +DY +
Sbjct: 173 TREFLASQGLSHCLLITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRPGLDFTQPNL 232
Query: 219 NFYLTELALKEYIGILIAYYRGN 241
N A++E+ G++ Y G
Sbjct: 233 NAQSMATAIREWYGLIGYYLAGR 255
>gi|229175521|ref|ZP_04303031.1| hypothetical protein bcere0006_45990 [Bacillus cereus MM3]
gi|228607917|gb|EEK65229.1| hypothetical protein bcere0006_45990 [Bacillus cereus MM3]
Length = 344
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 99/231 (42%), Gaps = 31/231 (13%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
L + + IF + ++ F+ + L + + + RP +++ + I++
Sbjct: 118 PASLFSEHFQFIFAAISLITMYFFVH---LSNFLSAYFLYQFNRP------RRNQDFIIV 168
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG+G P + SRI + + Y + TII SGG GL E+
Sbjct: 169 LGSGLINDKVPPLL--------ASRIHKAIDFYWKQAAVNTPPTIIFSGGQGPDEGLPEA 220
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRS 188
+E G+ + E +S++T+QN FS ++ +++ + I ++ +HL R+
Sbjct: 221 EAMQKYAVEKGIPIEHTVQENRSVNTYQNMSFSKEIMDSLKPEGKYRSIFTTNNFHLFRA 280
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+Y + G+N++ S +A +Y ++EY+ I++ +
Sbjct: 281 GIYARQAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVVMGRK 320
>gi|260597320|ref|YP_003209891.1| hypothetical protein CTU_15280 [Cronobacter turicensis z3032]
gi|260216497|emb|CBA29665.1| Uncharacterized protein ycbC [Cronobacter turicensis z3032]
Length = 230
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 48/236 (20%), Positives = 93/236 (39%), Gaps = 22/236 (9%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK-KDGNIIV 70
W + K+ + +++ + + LLK ++ Y P W + + IV
Sbjct: 1 MWFTRFKKSGKVLMTASWLV-LLLLSLQPVADGLLKPVEDDY------PTWNGQKADYIV 53
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G T A S R+ E +RL+ + + ++ +G + ++
Sbjct: 54 VLGGGYTWND-KWAPSSNLVNNSLPRVTEGVRLWLA----NPGAKLVFTGARATTNPVST 108
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ GV R DI DT + A + + + +LV+SA HL R+ +
Sbjct: 109 AEAGARVAESLGVPRSDIITLDTPKDTEEEATAVA---GALGKEPFLLVTSASHLPRAMI 165
Query: 191 YFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+F+ G+N + ++ LN + + P S +E A E +G + +G
Sbjct: 166 FFKRQGLNPIPAPANQMAIDSPLNPWERVYPSSLWLMHSERAGYELLGRAWQWVKG 221
>gi|311105207|ref|YP_003978060.1| hypothetical protein AXYL_02016 [Achromobacter xylosoxidans A8]
gi|310759896|gb|ADP15345.1| hypothetical protein AXYL_02016 [Achromobacter xylosoxidans A8]
Length = 254
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 50/244 (20%), Positives = 98/244 (40%), Gaps = 17/244 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L I L++ + +RK L + W + T L + P L+P
Sbjct: 20 LVVIGLVLGLF-----RLRKTGGALIVAGLLWALAWSLPATSLWLGGALESRYPHLAPSE 74
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG T + + + R+ +LY + + +++SGG
Sbjct: 75 SPTADAIVVLGGNTANGRANWFLPYDKD-TAVVRVDTAAQLYLAGR----APKVLLSGGA 129
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ ++E+ + + + GV + LE S T++NA + +K+ ++LV+SA
Sbjct: 130 LEG-DVSEARGMAHAIRQQGVPETALILENSSRTTYENAALTEDQLKSRGIGKVLLVTSA 188
Query: 183 YHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIA 236
H+ R+ F G+ A+ + + +P F + +KEY G+ +
Sbjct: 189 LHMPRAMAAFSKQGVEAVAAPAPPQIVAPADGSLPLWLPDQRTFDASRSIIKEYAGLFVY 248
Query: 237 YYRG 240
+ RG
Sbjct: 249 WLRG 252
>gi|182413009|ref|YP_001818075.1| hypothetical protein Oter_1189 [Opitutus terrae PB90-1]
gi|177840223|gb|ACB74475.1| protein of unknown function DUF218 [Opitutus terrae PB90-1]
Length = 258
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 4/228 (1%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ + + + + +F +G G + +L + LQ PQ ++I
Sbjct: 26 IVAVAAIRRWDMVLPLAVVCVAVFILVGNGFLTRLLARSLQER--AFFQKPQDFGGVSVI 83
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
VLLG+G + + P + +YSRI LY+S C +I++G D G A
Sbjct: 84 VLLGDGHIV--ERGSGEALPGWLAYSRIERACELYRSATATGAACRLIVTGDDISDLGTA 141
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+ VY +L GV DI++E + +T++ A+ +S ++K+ + I +V+S H+KR+
Sbjct: 142 KEPVYVQRLRALGVPVGDIRVEGKGRNTYRQAELTSEILKSERYDRIFMVTSGLHMKRAL 201
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
YF++FG+ SDY+ +++PL +N + ++AL +Y G+ +
Sbjct: 202 RYFRNFGVRAIPVASDYVIGNITLLPLGSNLAIADIALHQYAGLARLW 249
>gi|238789306|ref|ZP_04633093.1| hypothetical protein yfred0001_41150 [Yersinia frederiksenii ATCC
33641]
gi|238722638|gb|EEQ14291.1| hypothetical protein yfred0001_41150 [Yersinia frederiksenii ATCC
33641]
Length = 234
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 20/238 (8%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
++ W Q K F +++L I + LL L+ Y Q
Sbjct: 3 LALILLWFTRWQKSGKTLFALSWLVLL-LISLQPVADRLLLPLEKQYATY----QGNDPV 57
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G T P A S R+ E +RLY++ ++ +GG +
Sbjct: 58 DYIVVLGGGYTFNPN-WAPSANLFANSLPRVTEGIRLYRAH----PDAKMVFTGGAGP-N 111
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ + GV ++I Q DT + A +S++ K +LV+SA HL
Sbjct: 112 SQSSARTAAQVAESLGVPAENIIALDQPKDTVEEAAAVASLV---GDKPFLLVTSASHLP 168
Query: 187 RSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGILIAYY 238
R+ +F G++ A+ ++ L ++ IP + +E A E +G++
Sbjct: 169 RAMKFFVAKGLHPIAAPANQLAITTPLHSWERTIPAAVYLGHSERAWYETLGLIWQKL 226
>gi|317491475|ref|ZP_07949911.1| hypothetical protein HMPREF0864_00674 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316921022|gb|EFV42345.1| hypothetical protein HMPREF0864_00674 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 256
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 94/234 (40%), Gaps = 19/234 (8%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
++ W Q + KI +S L + I LL L+ Y + + +
Sbjct: 27 LIFMWWTRWQRLGKI-CISLAWLGILLLSLQPIADRLLAPLENHYP----TINTPSNADY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +R + + + II +G + +
Sbjct: 82 IVVLGGGYTFNPD-WAPSSNLINNSLPRVTEGVR----QLELNPNAKIIFTGAAAISNPI 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V N GV + I + + DT Q AQ + +++ + ++LV+SA HL R+
Sbjct: 137 SSAQVAANVAKSLGVPAERIIILDKPRDTQQEAQEVAKIVQK---QRLLLVTSANHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIA 236
+F+ ++ + ++ LN + +P +E A E +G
Sbjct: 194 LRFFKAEALDPIPAPANQLAISSPLNPWERWLPSPLYLGHSERAWYETLGSWWQ 247
>gi|320530702|ref|ZP_08031746.1| hypothetical protein HMPREF9555_01853 [Selenomonas artemidis F0399]
gi|320136989|gb|EFW28927.1| hypothetical protein HMPREF9555_01853 [Selenomonas artemidis F0399]
Length = 258
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 20/248 (8%)
Query: 1 MLLSWIFLI----VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
+L IF++ ++ + Q ++ +F + G + + + L+ +Y P
Sbjct: 19 ILPPGIFILALAAIAVYLWRRQVKAAAGILAAIAAVFYLLTTGAVADLFMGSLERTYPVP 78
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
G++I++LG G + SR+ +RL++ I
Sbjct: 79 E-----HPQGDVIIMLGGGAIGGVQDVDGEGMLAPSPASRLLTAVRLHRLY-----GLPI 128
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++SGG K E+ + L+ GV + I E++SL T QNA++S+ ++ +
Sbjct: 129 LLSGGQVFKDTGTEAEIARRVLISLGVPEEQIYTESESLTTRQNARYSAEILHREGFTHP 188
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEY 230
ILV+SA+HL R+ L F+ GI SD+ +P + F L+E
Sbjct: 189 ILVTSAFHLPRAVLNFEKLGIEVTPYPSDFWVPAHPHLNPLKFVPSVSPFQTNITFLREE 248
Query: 231 IGILIAYY 238
+ + Y
Sbjct: 249 LRTFVTRY 256
>gi|260887636|ref|ZP_05898899.1| putative membrane protein [Selenomonas sputigena ATCC 35185]
gi|330837998|ref|YP_004412578.1| protein of unknown function DUF218 [Selenomonas sputigena ATCC
35185]
gi|260862652|gb|EEX77152.1| putative membrane protein [Selenomonas sputigena ATCC 35185]
gi|329745762|gb|AEB99118.1| protein of unknown function DUF218 [Selenomonas sputigena ATCC
35185]
Length = 252
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 48/223 (21%), Positives = 100/223 (44%), Gaps = 16/223 (7%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ +F + ++ +L+ L+ +Y P K +G+++++LG G
Sbjct: 40 AIVLITAVFYLLSTYLVADVLMGALEDAY-----MPPAKPEGDVVIMLGGGAFSDAPDVD 94
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ +R+ +RL + + I++SGG + E+++ L+ G+
Sbjct: 95 GEGALTASPSTRLLTAVRLAQ-----KLDLPILVSGGQVFQESGKEALLAKRTLVSLGIP 149
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
I +E S +T QNA +++ ++K ILV+SA+H+KRS L ++ GI +
Sbjct: 150 ESRILVEGASQNTVQNAAYTAKILKEHGLVRPILVTSAFHMKRSVLNYEKLGIEVVPYPT 209
Query: 205 DYLNAYYSII------PLSANFYLTELALKEYIGILIAYYRGN 241
DY+ +++ I P + + + L+E + + Y G
Sbjct: 210 DYMVSHHPIFHVVKLAPSADALHTNAVVLQECLRTAVTYCLGK 252
>gi|271500774|ref|YP_003333799.1| hypothetical protein Dd586_2243 [Dickeya dadantii Ech586]
gi|270344329|gb|ACZ77094.1| protein of unknown function DUF218 [Dickeya dadantii Ech586]
Length = 259
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 18/240 (7%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ W Q +I ++ L+ + + LL L+ Y P +P + K
Sbjct: 25 IALALLWFSRWQKTARI-MLTGGWLVLLLLSLQPVADRLLLPLESRY--PTWTPDFPK-V 80
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
N IV+LG G T P P + S +R+ E +RL+++ + +I +G Q +
Sbjct: 81 NYIVVLGGGYTFNPDWPPSANLIN-NSLARVTEGIRLWRA----NPGAKLIFTGAAAQGN 135
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ + GV DI L ++ DT + A + ++I + +LV+SA HL
Sbjct: 136 PVTSASTAARVAESLGVPAQDILLVDKARDTEEEAAGTEALI---GKQPFLLVTSANHLP 192
Query: 187 RSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ +FQ G++ + ++ LN + + P + +E A E +G++ +G
Sbjct: 193 RAIRFFQARGLHPIPAPANQLAITSPLNPWERVFPSALYLSHSERAWYEGLGLIWQQMKG 252
>gi|187478721|ref|YP_786745.1| membrane protein [Bordetella avium 197N]
gi|115423307|emb|CAJ49841.1| putative membrane protein [Bordetella avium 197N]
Length = 254
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 93/230 (40%), Gaps = 16/230 (6%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKH--LQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
RK L + W + T L L+ Y P L P + IV+LG T
Sbjct: 31 RWRKTAGALIATGLIWVLVWSLPATSLWLGGALEHRY--PYLEPDSAPTADAIVVLGGNT 88
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ + + R+ LY + + +++SGG + + ++E+ +
Sbjct: 89 ANGRANWFLPYDKD-TAVVRVDTATDLYLADR----APKVVLSGGALEGN-VSEAQGMAH 142
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ + GV + LE S +T++NA + ++ ++LV+SA H+ R+ F G
Sbjct: 143 RMRQRGVPDSALVLENASRNTYENAALTEDTLRANHISKVLLVTSALHMPRAMAAFSKQG 202
Query: 197 INTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ A+ + + +P + +KEY G+L+ + RG
Sbjct: 203 VEAIAAPTPPQIVPPTDGSLSPWMPDMRTLDASRSIIKEYAGLLVYWLRG 252
>gi|238753514|ref|ZP_04614877.1| hypothetical protein yruck0001_20440 [Yersinia ruckeri ATCC 29473]
gi|238708467|gb|EEQ00822.1| hypothetical protein yruck0001_20440 [Yersinia ruckeri ATCC 29473]
Length = 259
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 86/234 (36%), Gaps = 21/234 (8%)
Query: 13 WHLLCQSIRKIFF-MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
W Q KI +SC +LL I + LL ++ Y + IV+
Sbjct: 31 WFTRWQKSGKILITISCLVLL--LISLQPVADRLLLPIENKYATYHGH----DRVDYIVV 84
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG G T P A S R+ E +RLY ++ +GG + +
Sbjct: 85 LGGGYTFNPN-WAPSANLFPNSLPRVTEGIRLYLQQ----PGSKLVFTGGSGPDGVQSSA 139
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
GV DI + DT + A + ++ K +LV+SA HL R+ +
Sbjct: 140 RTAAGVAESLGVPVTDIIALEKPKDTEEEAAEVALLV---GNKPFLLVTSANHLPRAIKF 196
Query: 192 FQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
F G+ + ++ L + I P + +E A E +G L + +
Sbjct: 197 FTDNGMQPIPAPANQLAVTTPLHNWERIFPSANALSHSERAWYETLGRLWQWIK 250
>gi|52080430|ref|YP_079221.1| hypothetical protein BL02952 [Bacillus licheniformis ATCC 14580]
gi|52785809|ref|YP_091638.1| hypothetical protein BLi02055 [Bacillus licheniformis ATCC 14580]
gi|319645611|ref|ZP_07999843.1| hypothetical protein HMPREF1012_00876 [Bacillus sp. BT1B_CT2]
gi|52003641|gb|AAU23583.1| conserved hypothetical membrane protein [Bacillus licheniformis
ATCC 14580]
gi|52348311|gb|AAU40945.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
gi|317392497|gb|EFV73292.1| hypothetical protein HMPREF1012_00876 [Bacillus sp. BT1B_CT2]
Length = 343
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 104/241 (43%), Gaps = 30/241 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+++ ++ ++ L +++ +F S + ++ F + L + + + RP L
Sbjct: 107 IIIFFLLSVIDPARFLSPNVQPLFAGSSLIAVYFFFH---LTNFLTAYFLYQFNRPKL-- 161
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG+G P + SRI + + Y+ + II SG
Sbjct: 162 ----NQDYIIVLGSGLINDTVPPLL--------ASRIDKAVDFYRKQAAVAPPPKIIFSG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIIL 178
G L+E+ L+ G+ + E +S++T+QN FS ++ ++ N I
Sbjct: 210 GQGPDENLSEAEAMQRYALKKGIPEEHTFKEDRSVNTYQNMLFSKQLMDSLSDGKYNSIF 269
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ +HL R+ LY + G+ ++ S +A +Y ++EYI +++
Sbjct: 270 TTNNFHLFRASLYAKRAGLKSQGIGS-----------KTAFYYWPNAMIREYIAVVVMNR 318
Query: 239 R 239
+
Sbjct: 319 K 319
>gi|229147646|ref|ZP_04275990.1| hypothetical protein bcere0012_47720 [Bacillus cereus BDRD-ST24]
gi|228635855|gb|EEK92341.1| hypothetical protein bcere0012_47720 [Bacillus cereus BDRD-ST24]
Length = 343
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 106/234 (45%), Gaps = 30/234 (12%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
W+ ++ + +SIR +++ + + ++ F+ + L + + + RP K
Sbjct: 111 WVISLIEPVNFFPESIRTLYWGAVLISIYLFVD---LSNFLTAYFLYQFNRP------KY 161
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+G P + SRI + Y+ + S II SGG
Sbjct: 162 NQDFIIVLGSGLINDKVPPLL--------ASRINRAIEFYRKQEAVSSPPKIIFSGGQGP 213
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSA 182
++E+ + +++G+ + E +S T+QN +S ++++++G N I ++
Sbjct: 214 DENISEAEAMQDYAVKNGIPLEHTIKENRSTTTYQNMLYSKEIMESLKGFQYNCIFSTNN 273
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+H+ R+ LY + G+N++ S +A +Y ++EYI I +
Sbjct: 274 FHVFRAGLYAKIVGLNSQGIGS-----------KTAFYYWPNAMIREYIAIFVM 316
>gi|312171960|emb|CBX80217.1| Uncharacterized protein ycbC [Erwinia amylovora ATCC BAA-2158]
Length = 262
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 19/233 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K +S L + + LL L+ Y P Q + IV+L
Sbjct: 31 WFSRWQKSAKTL-ISVAWLFLLLLSLQPVADRLLAPLEDRY--PTWHNQ--HPLDYIVVL 85
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T + S R+ E +R++++ + +I +GG Q + ++ +
Sbjct: 86 GGGYTWNLQWAPSSNMLN-NSLPRLAEGIRIWRA----NPQAKLIFTGGKAQHNPMSSAA 140
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V + GV I + + DT Q A + ++ N + LV+SA HL R+ +F
Sbjct: 141 VTASVAQSLGVPAAAIIILDKPRDTEQEAHEVAKIVHN---QPFALVTSANHLPRAIRFF 197
Query: 193 QHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
Q+ G+ + ++ LN + ++P S +E AL E IG L + +
Sbjct: 198 QYQGLQPWPAPANQLAVASPLNVWERVLPSSFWLGHSERALYENIGRLWQWLK 250
>gi|296103078|ref|YP_003613224.1| hypothetical protein ECL_02734 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295057537|gb|ADF62275.1| hypothetical protein ECL_02734 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 259
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 47/236 (19%), Positives = 94/236 (39%), Gaps = 19/236 (8%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
W Q K ++ L+ + + LL+ ++ +Y + Q + IV+
Sbjct: 30 VWFSRFQKSGKTL-ITFGWLVLLLLSLQPVADKLLRPIENTYP----TWQGNQKVEYIVV 84
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG G T P A S R+ E +RL+ + + +I +G + + ++ +
Sbjct: 85 LGGGYTWDPN-WAPSSNLINNSLPRLNEGIRLWLA----NPGSKMIFTGAPAKTNPVSTA 139
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
GV R I DT + A I ++ +LV+SA HL R+ ++
Sbjct: 140 EAGARVAESLGVPRSAIITLDSPKDTEEEAAAVKQAIGDV---PFLLVTSASHLPRAMIF 196
Query: 192 FQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
F+ G++ + ++ LN + +IP ++ E +G + + +G+
Sbjct: 197 FEKQGLHPLPAPANQMAINAPLNPWERVIPSPMWLMHSDRVGYETLGRIWQWLKGS 252
>gi|295096380|emb|CBK85470.1| Uncharacterized conserved protein [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 259
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 45/209 (21%), Positives = 86/209 (41%), Gaps = 18/209 (8%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
+ LL+ ++ +Y + Q + IV+LG G T P A S R+
Sbjct: 56 QPVADGLLRPIENTYP----TWQGNQKVGYIVVLGGGYTWDPN-WAPSSNLINNSLPRLN 110
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
E +RL+ + + +I +G + + ++ + GV R I DT
Sbjct: 111 EGIRLWLA----NPGSKMIFTGAAAKTNPVSTAEAGARVAESLGVPRSAIITLDSPKDTE 166
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYS 212
+ A I ++ +LV+SA HL R+ ++F+ G++ + ++ LN +
Sbjct: 167 EEAAAVKQAIGDV---PFLLVTSASHLPRAMIFFEKQGLHPLPAPANQMAIDAPLNPWER 223
Query: 213 IIPLSANFYLTELALKEYIGILIAYYRGN 241
IIP ++ E +G L + +G+
Sbjct: 224 IIPSPVWLMHSDRVGYETLGRLWQWLKGS 252
>gi|292487838|ref|YP_003530713.1| hypothetical protein EAMY_1355 [Erwinia amylovora CFBP1430]
gi|292899065|ref|YP_003538434.1| membrane protein [Erwinia amylovora ATCC 49946]
gi|291198913|emb|CBJ46023.1| putative membrane protein [Erwinia amylovora ATCC 49946]
gi|291553260|emb|CBA20305.1| Uncharacterized protein ycbC [Erwinia amylovora CFBP1430]
Length = 262
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 19/233 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K +S L + + LL L+ Y P Q + IV+L
Sbjct: 31 WFSRWQKSAKTL-ISVAWLFLLLLSLQPVADRLLAPLEHRY--PTWHNQ--HPLDYIVVL 85
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T + S R+ E +R++++ + +I +GG Q + ++ +
Sbjct: 86 GGGYTWNLQWAPSSNMLN-NSLPRLAEGIRIWRA----NPQAKLIFTGGKAQHNPMSSAA 140
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V + GV I + + DT Q A + ++ N + LV+SA HL R+ +F
Sbjct: 141 VTASVAQSLGVPAAAIIILDKPRDTEQEAHEVAKIVHN---QPFALVTSANHLPRAIRFF 197
Query: 193 QHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
Q+ G+ + ++ LN + ++P S +E AL E IG L + +
Sbjct: 198 QYQGLQPWPAPANQLAVASPLNVWERVLPSSFWLGHSERALYENIGRLWQWLK 250
>gi|222100068|ref|YP_002534636.1| hypothetical protein CTN_1094 [Thermotoga neapolitana DSM 4359]
gi|221572458|gb|ACM23270.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
Length = 252
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 48/244 (19%), Positives = 103/244 (42%), Gaps = 20/244 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ IF+++ + + F+ L+ + + L+ L+ L+ P
Sbjct: 26 LVTPGIFILILLLSAVFSRKGRWLFVLLATFLYVLSSY-PAEFLFLRPLE----EDLIVP 80
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+IV+LG G S + RI ++++ I+++G
Sbjct: 81 DGLPQNGVIVILGGGVERNTKTG---DSLSDSTLRRILTGFQVHR-----KTGLPILVTG 132
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+I+ L+ GV ++ +E +S +T++NA F+ ++I ++ I+LV+
Sbjct: 133 GSLSGL-EPEAIIMKEYLVSLGVPEKNVLVENRSRNTYENAFFTKNLIGDV---PIVLVT 188
Query: 181 SAYHLKRSQLYFQHFGINTKASCSD---YLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ H++R+ F+ F + + +P + +FYL A+ E+IG++
Sbjct: 189 DSIHMRRALYTFKKFFSEVVPYPAGCYFGTPEFVDFLPSATSFYLNSRAIYEWIGLVWYN 248
Query: 238 YRGN 241
RG
Sbjct: 249 LRGR 252
>gi|152992958|ref|YP_001358679.1| hypothetical protein SUN_1369 [Sulfurovum sp. NBC37-1]
gi|151424819|dbj|BAF72322.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 251
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 15/245 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKI-FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ L F +++ + L Q +R+ F+ ++ + ILL ++ +Y +
Sbjct: 16 LPLGVFFFLMAIFFLSRQKVRRAKSFLYVGIIWLFLFSYAPFANILLHPIESAYSALQHA 75
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P K+ I +LGNG T T+P I + + ++ R+ E +RLY+ + TII+S
Sbjct: 76 P---KNTRYIYVLGNGHTTDRTLP-ITSQLASEAIVRLNEGIRLYRQL---EGNATIILS 128
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + + + G++ D+ L T + DT + AQ + + K+ + +ILV
Sbjct: 129 GYEGLHDPTPHAFMQEKLATALGIDPKDLILRTTAKDTEEEAQAARQIAKD---QPLILV 185
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGILI 235
+SAYH+ R+ +F+ G++ + + + N Y I + + +A E G L
Sbjct: 186 TSAYHMPRAMGWFEKEGLHPVPAPTYHQASLQNQDYFGIFSADALRKSTIAFHELFGSLW 245
Query: 236 AYYRG 240
+G
Sbjct: 246 QKVKG 250
>gi|253990291|ref|YP_003041647.1| hypothetical protein PAU_02815 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781741|emb|CAQ84904.1| similar to inner membrane protein ycbc of escherichia coli
[Photorhabdus asymbiotica]
Length = 278
Score = 161 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 90/238 (37%), Gaps = 18/238 (7%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR--PLLSPQWKKDGNIIV 70
W Q K ++ L + I LL L+ Y + S + IV
Sbjct: 31 WFTRWQKTGKT-ILTFSWLALLLLSLQPIADKLLLPLESIYAKGYQSESSDINPPVDYIV 89
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G T P S S R+ E +RLY + ++ +GG +
Sbjct: 90 VLGGGFTYNPNWAPSSNLLS-NSLPRVTEGIRLYH----LNPGSKMVFTGGKGTNSKSS- 143
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ V GV +D T+ +DT Q A +I + ILV+SA H++R+
Sbjct: 144 AEVAAMVAQSLGVPAEDTIALTEPMDTEQEAHEVEKLIGKH---SFILVTSANHMQRAIT 200
Query: 191 YFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
+FQ G+N ++ L + +P S +E A E +G + + ++
Sbjct: 201 FFQQQGLNPIPGPANQLAITSPLHPWEKYLPSSYYLSHSERAWYEILGTIWQRIKWSK 258
>gi|163783486|ref|ZP_02178477.1| hypothetical protein HG1285_08734 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881250|gb|EDP74763.1| hypothetical protein HG1285_08734 [Hydrogenivirga sp. 128-5-R1-1]
Length = 239
Score = 161 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 60/242 (24%), Positives = 112/242 (46%), Gaps = 24/242 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFM--SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+L IF+ + + RK+ ++ L I +L L+ ++ P
Sbjct: 12 ILPPGIFIALFLLIAVLSRKRKLIYVPALAGALALYLISVEPFKDVLFYPLESPFKTPK- 70
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ G++IV+LG G + A SY R+ L++ +I+
Sbjct: 71 ----RIRGDVIVVLGGGAYNSGYLKA-------SSYKRLIAGFLLHRR-----TGKPLIL 114
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG + E+ V LLE GVE DI + +S DT++NA++ ++ + + ++I L
Sbjct: 115 SGGAAIG-VIPEAKVMKELLLEFGVEEKDIYADLRSRDTYENAKYVRNICEKIGCRSITL 173
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGIL 234
V+SA+H++R+ + F+ G+ + +D YS P + FY + +A++EY+G+L
Sbjct: 174 VTSAFHMRRALMVFKKTGLEVQPYPTDLKFEGRYNLYSAFPKYSVFYDSSIAIREYVGLL 233
Query: 235 IA 236
Sbjct: 234 FY 235
>gi|317407644|gb|EFV87583.1| hypothetical protein HMPREF0005_04608 [Achromobacter xylosoxidans
C54]
Length = 254
Score = 161 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 90/228 (39%), Gaps = 12/228 (5%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+RK L + W + T L + P L P + IV+LG T
Sbjct: 31 RLRKTGGALILAGLLWALAWSLPVTSLWLGGALENRYPHLPPAESPTADAIVVLGGNTAN 90
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ + + R+ +LY + + +++SGG + ++E+ + +
Sbjct: 91 GRANWFLPYDKD-TAVVRVDTAAQLYLAGR----APKVVLSGGALEG-DVSEARGMAHAI 144
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ GV + LE S T++NA + +K ++LV+SA H+ R+ F G+
Sbjct: 145 RQQGVPESALILENASRTTYENAALTEDQLKTRGIGKVLLVTSALHMPRAMAAFSKQGVI 204
Query: 199 TKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
A+ + + +P F + +KEY G+ + + RG
Sbjct: 205 AIAAPAPPQIVAPADGSLNPWLPDQRTFDASRSIIKEYAGLFVYWLRG 252
>gi|149915963|ref|ZP_01904486.1| hypothetical protein RAZWK3B_00010 [Roseobacter sp. AzwK-3b]
gi|149810037|gb|EDM69885.1| hypothetical protein RAZWK3B_00010 [Roseobacter sp. AzwK-3b]
Length = 266
Score = 161 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 17/243 (6%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLF-SFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
FL+ + + Q + I F LLF F+G+ + ++++ L+ Y +P
Sbjct: 25 FFLLFARRAVRAQRMAAIGFWVNGTLLFVLFMGFVPLGQLIMRPLEQRYPS---APDIAP 81
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
IIVL G A + + + R+ + L + +I +GG Q
Sbjct: 82 PAGIIVLGGG--EDGAMSAASGLPETNGAGDRMSAGVALALAY----PDAKLIFTGGSGQ 135
Query: 125 --KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
G++ +IV GV+ + I LE ++ +T +NA FS ++ + + +LV+SA
Sbjct: 136 FLAGGVSGAIVAKAYFESLGVDPERIILEGRARNTAENAAFSRELVDDPRIGPWVLVTSA 195
Query: 183 YHLKRSQLYFQHFGI-NTKASCSDYLNA---YYSIIPLSANFYLTELALKEYIGILIAYY 238
+H+ RS F G + DY + + P + NF L++KE+IG+L +
Sbjct: 196 FHMPRSLATFCAAGWRDITPFPVDYRSITDLEFKWDP-TGNFEKLNLSIKEWIGLLAYEW 254
Query: 239 RGN 241
G
Sbjct: 255 TGR 257
>gi|114776481|ref|ZP_01451526.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1]
gi|114553311|gb|EAU55709.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1]
Length = 257
Score = 161 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 90/246 (36%), Gaps = 13/246 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + ++ + + + + + L + + +LL L+ Y +S
Sbjct: 14 LPPGGLIVLAATGLVFWKRSWGRAIVILALALLWLLSTAPVRDLLLNPLEQRYPALDISQ 73
Query: 61 --QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
Q K D + IV+LG G + R L + +
Sbjct: 74 LQQMKADDSAIVVLGGGLYPRAPEYGGQDSLHDDGLMRTLYAADLAL-----KSNLDVYA 128
Query: 119 SGGD-PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+GG E ++ L+ GV+ + I E ++ T++N + M+K II
Sbjct: 129 TGGAFKPGQAEPEGLIMARMLIRFGVDPEHIHSENRARTTWENGLYIRDMMKKAGIHRII 188
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIG 232
LV++A+H+ RS F+ G++ A+ Y S +P + L EY+G
Sbjct: 189 LVTTAWHMPRSVRVFESLGMHVIAAPCSYRAGRQAYDLRSYLPRWNVLSDSGDGLHEYLG 248
Query: 233 ILIAYY 238
+L
Sbjct: 249 LLWYRL 254
>gi|313896016|ref|ZP_07829570.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975441|gb|EFR40902.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 258
Score = 161 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 20/248 (8%)
Query: 1 MLLSWIFLI----VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
+L IF++ ++ + Q ++ +F + G + + + L+ +Y P
Sbjct: 19 ILPPGIFILALTAIAVYLWRRQVKAAAGILAAIAAVFYLLTTGAVADLFMGSLERTYPVP 78
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
G++I++LG G + SR+ +RL++ I
Sbjct: 79 E-----HPQGDVIIMLGGGAIGGVQDVDGEGMLAPSPASRLLTAVRLHRLY-----GLPI 128
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++SGG K E+ + L+ GV + I E++SL T QNA++S+ ++ +
Sbjct: 129 LLSGGQVFKDTGTEAEIARRVLISLGVPEEQIYTESESLTTGQNARYSAEILHREGFMHP 188
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEY 230
ILV+SA+HL R+ L F+ GI SD+ +P + F L+E
Sbjct: 189 ILVTSAFHLPRAVLNFEKLGIEVTPYPSDFWVPAHPHLNPLKFVPSVSPFQTNITFLREE 248
Query: 231 IGILIAYY 238
+ + Y
Sbjct: 249 LRTFVTRY 256
>gi|254481130|ref|ZP_05094376.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
gi|214038925|gb|EEB79586.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
Length = 245
Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 101/230 (43%), Gaps = 14/230 (6%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ ++ ++ L+ L+ ++ +S K + IV+LG
Sbjct: 23 WRWRRASASLLGVSIVWLYACSTALVADFLMASLEDDFRPKAMSVVPKV--DAIVVLGGA 80
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
T ++ + + R+ + LYK+ K +++SGG E+
Sbjct: 81 TRGDTYWSSMADLNA--AADRLTHAVSLYKAKK----APLVLLSGGSTTGS-RPEAEQLR 133
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ ++ G+ + +E QSLDT QNA++S+ +++ + I+LV+SAYH+ R+ F+
Sbjct: 134 DYMVLMGLPDRALLMERQSLDTQQNARYSALILQGRDVRRILLVTSAYHMSRAVPLFERQ 193
Query: 196 GINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G + +DY A +P + + + + A+KEY+G L +G
Sbjct: 194 GFEVIPAPTDYQRLVGKPAVPRWLPTADDLWRSTAAIKEYVGFLYYRAQG 243
>gi|229128467|ref|ZP_04257446.1| hypothetical protein bcere0015_29130 [Bacillus cereus BDRD-Cer4]
gi|228654970|gb|EEL10829.1| hypothetical protein bcere0015_29130 [Bacillus cereus BDRD-Cer4]
Length = 297
Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 51/236 (21%), Positives = 104/236 (44%), Gaps = 30/236 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ +V + ++IR +++ + + L+ FI + L + + + RP
Sbjct: 63 FFLVISLVEPINFFPEAIRTLYWGAVLISLYLFID---LSNFLTAYFLYQFNRP------ 113
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K + + I++LG+G P + SRI + YK + S II SGG
Sbjct: 114 KYNQDFIIVLGSGLINDKVPPLL--------ASRINRAIEFYKKQEAVSSPPKIIFSGGQ 165
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVS 180
++E+ + +G+ ++ E +S T+QN FS ++++++G N I +
Sbjct: 166 GSDENISEAKAMQEYAVNNGIPLENTIKEDRSTTTYQNMLFSKRIMESLKGTQYNCIFST 225
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ +H+ R+ LY + G+N++ S +A +Y ++EYI I +
Sbjct: 226 NNFHVFRAGLYAKIVGLNSQGIGS-----------KTAFYYWPNAMIREYIAIFVM 270
>gi|307319303|ref|ZP_07598732.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
gi|306895139|gb|EFN25896.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
Length = 262
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 16/247 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-WGIIPTILLKHLQFSYQRPLLSPQ 61
L+++ L+V +L + R +S F L F+ + + L+ L+ + RP +P+
Sbjct: 17 LAFLALVVGVLLMLGRFRRSGGTLSAFGLAVLFVTLFTTAGSYFLQILEDRFPRP--TPE 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IIVL G + + Q+ R ET+RL ++ I++SGG
Sbjct: 75 PTELACIIVL--GGAFENVVMASRGGMELNQAAERFVETLRLAQAY----PQARILVSGG 128
Query: 122 DPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
D G+ E + N G+ D + +S TF+NA+++ ++ + LV
Sbjct: 129 DGSLSGIYEGDAHASENFFGTFGIGSDRLIRAGESRTTFENARYTRDLLAKNGLERCALV 188
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGIL 234
+SAYH+ RS F+ G+ +DY + + S N L A KE+ G++
Sbjct: 189 TSAYHMPRSIGLFRANGMEVTPWPTDYRTSGKVRLGFDFTQPSLNAQLATTAAKEWTGLV 248
Query: 235 IAYYRGN 241
Y G
Sbjct: 249 AYYLLGR 255
>gi|167464933|ref|ZP_02330022.1| hypothetical Membrane Spanning Protein [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322382670|ref|ZP_08056534.1| hypothetical protein PL1_1385 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321153368|gb|EFX45791.1| hypothetical protein PL1_1385 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 365
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 105/241 (43%), Gaps = 30/241 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ WI +++ L+ + +F +LL+ F+ I L + + + +P
Sbjct: 125 LLVYWIISLMNPTELISDDWKILFTGVSAILLYMFMD---IANFLTASILYQFNKP---- 177
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K + + +++ G+G P + SRI + + Y + + +I SG
Sbjct: 178 --KYNQDFVIVHGSGLIHDKVPPLL--------ASRIDKAIEFYWMQSKVASPPKLIFSG 227
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIIL 178
G ++E+ +E G+ +D E QS T++N +S +++++ G+ N I
Sbjct: 228 GKGSDENVSEAEAMQIYAIEKGIPIEDTIQENQSRSTYENLLYSKRIMESINGEKYNSIF 287
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
VS+ +H+ R+ +Y + G+++ S + +Y ++EYI I +
Sbjct: 288 VSNNFHIFRAGMYARQLGLDSHCIGS-----------KTVFYYWLNAMIREYIAIFVMQR 336
Query: 239 R 239
+
Sbjct: 337 K 337
>gi|268678711|ref|YP_003303142.1| hypothetical protein Sdel_0069 [Sulfurospirillum deleyianum DSM
6946]
gi|268616742|gb|ACZ11107.1| protein of unknown function DUF218 [Sulfurospirillum deleyianum DSM
6946]
Length = 261
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 69/261 (26%), Positives = 121/261 (46%), Gaps = 36/261 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L IF+++ ++ +L ++FF++ + +F + + LLK L+ Y +PL
Sbjct: 15 VLPPGIFILLFFFAVLYAKKFRLFFLANAV-VFYLLSNAYVADWLLKPLEEPYNQPLHVT 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ +++LG G T + S +Y R+ + + KS K ++ SG
Sbjct: 74 A----VDAVIVLGGGHTQ----GVANLPLSSDAYKRMMWGLMVAKSHK-----LPLLFSG 120
Query: 121 GDPQKHGLAESIVYNNKLLESG------VERDD--------IKLETQSLDTFQNAQFSSS 166
G K L ES + + L E + +E +SLDT+QNAQFS +
Sbjct: 121 GGLYKEYL-ESDAFLDSLKELKSYLDIATPNSKSLATKEFSLHVEDKSLDTYQNAQFSKT 179
Query: 167 MIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSAN 219
+ G I LV+SAYH+KRS + ++HFG N + +++ + + +P +
Sbjct: 180 AFEKAGVMGPTIYLVTSAYHMKRSIMLYEHFGFNVIPAATNFKINHREKDGWDYLPSAHA 239
Query: 220 FYLTELALKEYIGILIAYYRG 240
Y + +AL EY G+L RG
Sbjct: 240 LYKSYIALHEYAGLLSLKLRG 260
>gi|170749150|ref|YP_001755410.1| hypothetical protein Mrad2831_2743 [Methylobacterium radiotolerans
JCM 2831]
gi|170655672|gb|ACB24727.1| protein of unknown function DUF218 [Methylobacterium radiotolerans
JCM 2831]
Length = 281
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 54/241 (22%), Positives = 96/241 (39%), Gaps = 14/241 (5%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
I L ++ + + L G + + L L+ + P
Sbjct: 23 ILLGIAVAAVTRWRRSGLGLALLGSFLLGAAGLAPLSDVALIPLEQRFP---AYPDDGPA 79
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ- 124
I++LG G + A R + R L + ++ SGG
Sbjct: 80 PTGIIVLGGGIEAGLSE-ARRQIVVNDAGERPIYLGDLARRY----PAARLVFSGGSGFI 134
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
G+AE+ + + + GV R + LE +S +T +NA FS++++K G+ +LV+SA+H
Sbjct: 135 AGGMAEADIVSRQADVIGVPRTRLILENRSRNTHENAAFSAALVKPKPGERWLLVTSAWH 194
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIP-----LSANFYLTELALKEYIGILIAYYR 239
+ R+ F+ G A DY +S + S +LA+KE+IG++
Sbjct: 195 MPRAVGCFRQAGFAVDAFPVDYRTRGWSDVAHFHGFASDGLLQFDLAVKEWIGLVAYRLS 254
Query: 240 G 240
G
Sbjct: 255 G 255
>gi|283833789|ref|ZP_06353530.1| putative KicA protein [Citrobacter youngae ATCC 29220]
gi|291070454|gb|EFE08563.1| putative KicA protein [Citrobacter youngae ATCC 29220]
Length = 254
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
+ LLK ++ SY + Q + IV+LG G T P A S R+
Sbjct: 56 QPVADSLLKPIEDSYP----TWQDTQKVEYIVVLGGGYTWNP-QWAPSSNLINNSLPRLN 110
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
E +RL+++ + +I +G + + ++ + G+ R +I + DT
Sbjct: 111 EGIRLWRA----NPGSKLIFTGAAAKTNNVSTAEAGARVAESLGIPRSEIITLDKPKDTE 166
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYS 212
+ A +++ + +LV+SA HL R+ ++FQ G++ + ++ LN +
Sbjct: 167 EEA---AAVKHAIGDAPFLLVTSASHLPRAMIFFQQAGLHPLPAPANQLAIDSPLNPWER 223
Query: 213 IIPLSANFYLTELALKEYIGILIAYYRG 240
IP ++ E +G + + +G
Sbjct: 224 AIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|182416277|ref|YP_001821343.1| hypothetical protein Oter_4472 [Opitutus terrae PB90-1]
gi|177843491|gb|ACB77743.1| protein of unknown function DUF218 [Opitutus terrae PB90-1]
Length = 263
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 6/238 (2%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ ++ L + + + + +F +G G + L + LQ PQ
Sbjct: 23 LILLFVAGIAAVAALRRWDTVLSLATGCVAVFILVGNGFLARWLARSLQE--PAFFRKPQ 80
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++IVLLG+G + P + P + +YSRI LY+S C +I++G
Sbjct: 81 DFGGVSVIVLLGDGNIVQPN--SGEALPGWLAYSRIERAGELYRSATASGAACRVIVTGD 138
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D G + VY +L GV DI++E + +T++ A+ +S ++K + I +V+S
Sbjct: 139 DSSDPGAVKEPVYVQRLRALGVPAGDIRVEGKGRNTYRQAELTSEILKAERCDRIFMVTS 198
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
H+KR+ YF +FG++ SDY+ +++PL +NF + ++AL +Y G+ A R
Sbjct: 199 GLHMKRALRYFLNFGVSAIPVASDYVTGNITLLPLGSNFAIADIALHQYAGL--ARLR 254
>gi|292670312|ref|ZP_06603738.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292648043|gb|EFF66015.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 252
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 55/244 (22%), Positives = 100/244 (40%), Gaps = 17/244 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + L + W R + C + + G L+ L+ +Y+ P+
Sbjct: 17 IFILVMLAAAAWLWKKCGARLAAGVLCGIACALYLLSTGAAADSLMGSLERTYEVPV--- 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
G+IIV+LG G + SR+ +RL++ H I++SG
Sbjct: 74 --HPQGDIIVMLGGGAIADVRDVDGTGMLAQSPSSRLLAVLRLHRRY-----HLPILLSG 126
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E+ + L GV + I +ET S T QNA++S+ +++ + ILV+
Sbjct: 127 GQVFSDTGSEAEIARRVLRSLGVPSEMIYVETHSRTTGQNARYSAEILRREGFAHPILVT 186
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYIGIL 234
SA+HL R+ L F+ G+ +D+ + P ++ + L+E +
Sbjct: 187 SAFHLPRAVLNFEKEGVAVTPYPTDFWVSGNPQLYALKFAPNASALLTNTVFLQEKLRTF 246
Query: 235 IAYY 238
I Y
Sbjct: 247 ITRY 250
>gi|153873460|ref|ZP_02002036.1| Protein of unknown function DUF218 [Beggiatoa sp. PS]
gi|152070073|gb|EDN67963.1| Protein of unknown function DUF218 [Beggiatoa sp. PS]
Length = 195
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 14/200 (7%)
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
+ L+ + P IV++G + P R + R+ RLY
Sbjct: 1 MVSLERYH--PSQDITDYPMVQAIVVIGG--CLESAKPPRRTFNVGDAGDRVIHAARLYH 56
Query: 106 SCKQHSMHCTIIISGGD-PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
+ K I++SGG P + E+ L E GV + E S+ T++NA FS
Sbjct: 57 AGK----APLILVSGGTLPWRKVPPEADAMRAFLEELGVPTKAVMSEPDSITTYENALFS 112
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSAN 219
++ N I+LV+SA+H++RS F+ G + +D+ + + +P
Sbjct: 113 KKLLDNKGIHKILLVTSAFHMRRSAAVFRKVGFEVIPAPTDFRVVKNPPSLFDYLPDVRY 172
Query: 220 FYLTELALKEYIGILIAYYR 239
+ T +A+KEYIG+ +
Sbjct: 173 LHQTTIAIKEYIGLEYYALK 192
>gi|330829535|ref|YP_004392487.1| integral membrane protein [Aeromonas veronii B565]
gi|328804671|gb|AEB49870.1| Integral membrane protein [Aeromonas veronii B565]
Length = 256
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 19/236 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K+ +L+ + +G + L + L+ ++ P + IV+L
Sbjct: 30 WFTRFQKTGKLLATLS-LLIVALMGMRPVSYELARGLEQTF--PPFEASQHPNIEAIVVL 86
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
GNG P +P +R + S +R E +RL ++ + + +SG L+ +
Sbjct: 87 GNGHVSDPAVP-MRSWQNNISLARTLEGVRLAQAYPDAELVFSGYVSG-----DTLSNAE 140
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V G+ R + L + DT A S+ ++++GK + LVSSA HL R+ +
Sbjct: 141 VNARMAESLGIPRSRMTLFENNKDTHDEAV---SISRHLKGKEVALVSSATHLPRAMALY 197
Query: 193 QHFGINTKASCSDYL-------NAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
Q G+ + +DY YS +P +E A+ E+IG+ A RG
Sbjct: 198 QGQGLKAVPAPTDYTAKQSQVPQPLYSYLPKGRYLMYSEAAIHEWIGVWWARLRGQ 253
>gi|238757630|ref|ZP_04618814.1| hypothetical protein yaldo0001_19510 [Yersinia aldovae ATCC 35236]
gi|238704135|gb|EEP96668.1| hypothetical protein yaldo0001_19510 [Yersinia aldovae ATCC 35236]
Length = 266
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 58/242 (23%), Positives = 91/242 (37%), Gaps = 20/242 (8%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+V W Q K F ++ L I + LL L+ Y Q
Sbjct: 36 LALVLLWFTRWQKSGKTLFALSWLTLL-LISLQPVADRLLLPLEKHYATY----QGNDPV 90
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G T P A S R+ E +RLY++ M T G +
Sbjct: 91 DYIVVLGGGYTFNPN-WAPSANLFANSLPRVTEGIRLYRAHPNAKMVFT-----GSAGPN 144
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ + GV DI Q DT + A ++++ K +LV+SA HL
Sbjct: 145 SQSSAKTAALVAESLGVPAADIIALEQPKDTVEEAAAVATLV---GDKPFLLVTSASHLH 201
Query: 187 RSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ +F G++ + ++ L + IP + TE A E +G+L G
Sbjct: 202 RAIKFFTAKGLHPIPAPANQLAITTPLHNWERTIPAATWLVHTERAWYETLGLLWQKLTG 261
Query: 241 NR 242
N+
Sbjct: 262 NK 263
>gi|332342362|gb|AEE55696.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 247
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 19/234 (8%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q KIF +S L + + LL+ ++ +Y S + +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTYPTWNNS----QKVDY 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +RL++ + +I +GG + + +
Sbjct: 82 IVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTNTV 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV R+ I DT + A I +LV+SA HL R+
Sbjct: 137 STAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPRA 193
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIA 236
++FQ G+N + ++ LN + IP ++ E +G +
Sbjct: 194 MIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQ 247
>gi|291532233|emb|CBL05346.1| Uncharacterized conserved protein [Megamonas hypermegale ART12/1]
Length = 194
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
+L+ L+ +Y P P + ++I++LG G T +R+ +RL
Sbjct: 1 MLIGRLEDAYDPPKHLP----NADVIIVLGGGATGDTPDVTGTGTLCSIPANRLLTAVRL 56
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
K + II+SGG + E+ + L E GV D I LE +SL+T QNA++
Sbjct: 57 QK-----KLGIPIIVSGGQIYEDSGREADIARRILKELGVSEDMILLENRSLNTTQNAEY 111
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLS 217
S++++K+ + K +LV+SA+H++R+ + F G++ DY+ Y + P S
Sbjct: 112 STNILKSRKYKQPLLVTSAFHMERAVVNFNKLGVDVIPYPCDYMVNKEKVFHYNRLAPSS 171
Query: 218 ANFYLTELALKEYIGILIAYY 238
T + L+E + + Y
Sbjct: 172 QALEFTAIYLQENLRTFVTKY 192
>gi|307298224|ref|ZP_07578028.1| protein of unknown function DUF218 [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916310|gb|EFN46693.1| protein of unknown function DUF218 [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 252
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 58/248 (23%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSF----IGWGIIPTILLKHLQFSYQRPL 57
L IFLI++ + R+ M++ F + G + L+ L+ +Y P
Sbjct: 17 LFILIFLIIAVILIKKSEERRTKISGVVMIILCFFAYLLSTGFGTHLYLQPLERAYTAP- 75
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
G IV+L +G I P S +R+ + L+ K II
Sbjct: 76 ----NNVSGQAIVVLSSGIIISPE----GQVLDNHSVARLSKAYSLHLQTK-----LPII 122
Query: 118 ISGG-DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++G P + +A S + + LL+ GV + +E + T++NA++S+ + +I
Sbjct: 123 VTGSFMPGRSTVAVSELMRDWLLDRGVASSKVIVEPMAQTTWENARYSADICSQFNWSSI 182
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYI 231
+LV+SA H+KR+ F+ FG+ +DYL ++ +P ++ EY
Sbjct: 183 VLVTSAVHMKRAVTSFEKFGLRVTPFPTDYLYDHTKLSFVDFLPNQGALDANLASIHEYF 242
Query: 232 GILIAYYR 239
G L ++
Sbjct: 243 GQLWYLFK 250
>gi|239830956|ref|ZP_04679285.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239823223|gb|EEQ94791.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 272
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 111/233 (47%), Gaps = 6/233 (2%)
Query: 7 FLIVSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
F V L C RK + ++ + I G+ P L+ LQ Y L P +
Sbjct: 9 FAAVGLI-LFCFKWRKTGTVLIGLAVIFYGAIASGLAPDYLMNRLQSPYTSQLQRP--LE 65
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D ++ G GT ++ +EP SY+ + + + C C I SG D
Sbjct: 66 DNTAFIIFGTGTQVVDERGQKAVEPLAFSYAPLLAAAAMNRQCVDKGFSCKFIASGADVS 125
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
G++E+ +L + G++ I L+ +S +++QN++ ++++++ ++ ++L+ +A
Sbjct: 126 GTGVSEATAIAVQLEKVGIDPASILLDEKSRNSWQNSKNTAAILREIRPARVVLLQAAPM 185
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYL-TELALKEYIGILIA 236
L R LY HFG+ + + +L ++ + +A ++L T++AL E IG+
Sbjct: 186 LTRDLLYLAHFGVKPEPVAAGFLTGSHTNMSSTALYFLVTDVALHEEIGLWRY 238
>gi|238920331|ref|YP_002933846.1| hypothetical protein NT01EI_2441 [Edwardsiella ictaluri 93-146]
gi|238869900|gb|ACR69611.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 276
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 90/239 (37%), Gaps = 19/239 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W Q I K+ +S L + + LL L+ Y Q
Sbjct: 38 LALLWFTRRQRIGKVL-VSLAWLGILLLSMQPLADRLLAPLENRYPTLNGPHQ----ARY 92
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+V+LG G T P A S R+ E +R + +I +G Q + L
Sbjct: 93 VVVLGGGYTYNP-QWAPSSNLIGNSLPRVTEGIR----QLALNPQAQLIFTGAAAQGNPL 147
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV+ I + DT Q A+ + ++ N +ILV+SA H+ R+
Sbjct: 148 SSAEVAAQVARSLGVDEQRIIVLDSPRDTGQEARAVAGVVGNA---PLILVTSANHMPRA 204
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+F H G++ + ++ LN + +P +E A E +G L G
Sbjct: 205 LGFFHHQGLDPIPAPANQLAIASPLNPWERWLPSPLYLGHSERAGYETLGRLWQALTGQ 263
>gi|218709086|ref|YP_002416707.1| hypothetical protein VS_1092 [Vibrio splendidus LGP32]
gi|218322105|emb|CAV18210.1| Hypothetical protein VS_1092 [Vibrio splendidus LGP32]
Length = 301
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 50/245 (20%), Positives = 106/245 (43%), Gaps = 20/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L+++ L + + + + +S +F I + + + LL ++ + L
Sbjct: 52 LILAFLGLALVMFTA-KRKTGCLITLSALCGIF-LIAFQPVSSQLLMPMERQHTAFL--- 106
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG+G + IP E S R+ E +R+ + +I+SG
Sbjct: 107 PIDDTVDYIMVLGSGHVVDDQIPPTS-ELSRTGLMRLSEGIRILRLY----PGAKLILSG 161
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++ + + L GV + DI L + DT++ A+ +++ +KN K ++LV+
Sbjct: 162 Y-GAGTEVSNAKMMAKVALALGVAKPDIILLETAKDTWEEARQAAAFVKN---KKMVLVT 217
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ F G+ + ++YL + +P + TE E +G++
Sbjct: 218 SASHMTRALNEFNAAGMKPLPAPTNYLAQEGIVEPWNKYMPKAIYLEQTERYWHETMGLV 277
Query: 235 IAYYR 239
R
Sbjct: 278 WQSLR 282
>gi|312881496|ref|ZP_07741288.1| hypothetical protein VIBC2010_02326 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370862|gb|EFP98322.1| hypothetical protein VIBC2010_02326 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 254
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 27 SCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
C ++LFSFIG + I + LL L+ Y + + +++LG+G +
Sbjct: 26 GCVIVLFSFIGLFLASFQPISSRLLMPLERQYTAFF---PIDEPIDYVMVLGSGHIVDDK 82
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
IP E S R+ E +R+ + +I+SG ++ + + L
Sbjct: 83 IPPTS-ELSRSGLMRLAEGIRILRMY----PGSKLILSGYAA-GSDVSNARMMAKVALAL 136
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + DI L + DT++ A+ +++ + N KN+I+V+SA ++KR+ F G+
Sbjct: 137 GVAKPDIILLETAKDTWEEARQAAAFVNN---KNLIVVTSASNMKRALNEFYSAGLKPYP 193
Query: 202 SCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ ++YL + P S TEL E +G + R
Sbjct: 194 APTNYLAQKNIDTPWVKYTPKSTYLEQTELYWHETLGRIWQNLR 237
>gi|260772652|ref|ZP_05881568.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio metschnikovii CIP 69.14]
gi|260611791|gb|EEX36994.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio metschnikovii CIP 69.14]
Length = 268
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 106/242 (43%), Gaps = 26/242 (10%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSF-----IGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+ ++ + RK C ++LF I + + + LL L+ Y L +
Sbjct: 23 FIGLMLIMFTAKRKT---GCLVVLFCLSSLLVISFQPVSSRLLMPLERQYSAFL---PIE 76
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ +++LGNG + +IP E + + R+ E +R+ + +I+SG
Sbjct: 77 GTVDYVMVLGNGHVVDDSIPPTS-ELTRAALMRLSEGIRVMRMY----PGAKLILSGYAG 131
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
++ + + L GV + DI L + DT++ A+ +++ ++ + ++LV+SA
Sbjct: 132 GSE-MSHARMLAKVALALGVAKSDIILLETAQDTWEEARQAAAFVQQ---RTLVLVTSAS 187
Query: 184 HLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAY 237
H+ R+ FQ G+ + ++YL A+ IP + TE E +G++
Sbjct: 188 HMPRAMNEFQSAGLTPIPAPTNYLAQTNISQAWDKYIPRALYLEQTERYWYETMGLIWQT 247
Query: 238 YR 239
R
Sbjct: 248 MR 249
>gi|254719238|ref|ZP_05181049.1| hypothetical protein Bru83_06801 [Brucella sp. 83/13]
gi|265984234|ref|ZP_06096969.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306837987|ref|ZP_07470845.1| Hypothetical protein BROD_0794 [Brucella sp. NF 2653]
gi|264662826|gb|EEZ33087.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306406911|gb|EFM63132.1| Hypothetical protein BROD_0794 [Brucella sp. NF 2653]
Length = 264
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 18/250 (7%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 15 PLTIIFLLVAIGLLAAWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG G + + + RI ETMRL + I++
Sbjct: 75 LPQ---HVDGIIVLG-GYMNGEIVAGRQNFELNSAADRIVETMRLARLY----PDAKILV 126
Query: 119 SGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
SGG+ + E+ LL+ G D E +S +T +NA FS ++ + G+
Sbjct: 127 SGGEGTFFEKSAREAETTRALLLDLGFSGDRYIFEGKSRNTVENAIFSQALAQPKPGETW 186
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS-----ANFYLTELALKEYI 231
+LV+SAYH+ R+ F+ G + A DY L +AL+E+
Sbjct: 187 LLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWT 246
Query: 232 GILIAYYRGN 241
G+ ++ G
Sbjct: 247 GLTAYWWTGR 256
>gi|322832243|ref|YP_004212270.1| hypothetical protein Rahaq_1521 [Rahnella sp. Y9602]
gi|321167444|gb|ADW73143.1| protein of unknown function DUF218 [Rahnella sp. Y9602]
Length = 259
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 17/238 (7%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+V W Q K+FF ++L + + LL+ ++ Y P
Sbjct: 25 IALVLLWMTRWQKTGKVFFSLSWLL-LLLLSLQPVADNLLRPIESVY--PTYQASGNVPV 81
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+V+LG G T P A S R+ E +R+Y++ + +I +G +
Sbjct: 82 KYVVVLGGGYTYNPA-WAPSSNLINNSLPRVAEGIRIYRA----NPGSKMIFTGARAMTN 136
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
++ + V GV DI L + DT Q A M+ + +LV+SA HL
Sbjct: 137 PMSSAAVAGKVAESLGVPESDIILLDRPRDTHQEALQVKEMLGE---QPFVLVTSANHLP 193
Query: 187 RSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
R+ ++F+ G+N + ++ LN + +P + +E A E +G +
Sbjct: 194 RAIIFFRQLGLNPIPAPANQLAIDSPLNPWEKALPQALFLSHSERAWYETLGRAWQWM 251
>gi|153007464|ref|YP_001368679.1| hypothetical protein Oant_0119 [Ochrobactrum anthropi ATCC 49188]
gi|151559352|gb|ABS12850.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 277
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 112/240 (46%), Gaps = 6/240 (2%)
Query: 1 MLLSWIFLIVS---YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
M+L+ I + V H I + + + I I+P L+ LQ +Y L
Sbjct: 1 MMLNLIVVFVVAGLLLHFFNWRKTGIVLIGLAAIFYGAIASAILPDTLMSRLQSAYSSQL 60
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ +D ++ G GT + +EP SY I + + + C + C I
Sbjct: 61 QT--QLEDNTAFIVFGMGTQTVDGDGQKVVEPLAFSYGPILAAVAMNRQCVEKGFRCKFI 118
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
SG D G++E+ +L ++GV+ + L+ +S +++QN++ +++++ ++ ++
Sbjct: 119 ASGADVAGTGVSEAASIATQLEKAGVDPASVLLDEKSRNSWQNSRNVAAILREIRPAKVV 178
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA-NFYLTELALKEYIGILIA 236
L+ +A +KR LY HFG+ + + YL ++ + F +T+LAL E IG+
Sbjct: 179 LLQAAPMMKRDLLYLAHFGVKPEPVAAGYLTGSHTNMSSPGLYFLMTDLALHEEIGVWRY 238
>gi|294852515|ref|ZP_06793188.1| hypothetical protein BAZG_01442 [Brucella sp. NVSL 07-0026]
gi|294821104|gb|EFG38103.1| hypothetical protein BAZG_01442 [Brucella sp. NVSL 07-0026]
Length = 264
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 58/250 (23%), Positives = 103/250 (41%), Gaps = 18/250 (7%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 15 PLTIIFLLVAIGLLATWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG G + + + RI ETMRL + I++
Sbjct: 75 LPQ---HVDGIIVLG-GYMNGEIVAGRQNFELNSAADRIVETMRLARLY----PDAKILV 126
Query: 119 SGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
SGG+ + E+ LL+ G + E +S +T +NA FS ++ + G+
Sbjct: 127 SGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNTVENAIFSQALAQPKPGETW 186
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS-----ANFYLTELALKEYI 231
+LV+SAYH+ R+ F+ G + A DY L +AL+E+
Sbjct: 187 LLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWT 246
Query: 232 GILIAYYRGN 241
G+ ++ G
Sbjct: 247 GLAAYWWTGR 256
>gi|302185148|ref|ZP_07261821.1| hypothetical protein Psyrps6_02354 [Pseudomonas syringae pv.
syringae 642]
Length = 256
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 50/250 (20%), Positives = 97/250 (38%), Gaps = 20/250 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + F + + + ++ + L+ PL QW
Sbjct: 16 ILFVLLILGWWLRRSRPRLATAFFAVGLGGLWLMSLPVVVEFAARKLEQ--IPPLPQQQW 73
Query: 63 K---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ + IV+LGNG P+ R+ RL K I+ S
Sbjct: 74 ATLAQQADAIVVLGNGRERNSPTWGT-DTPTGLGLERLRLAARLAK-----ESGLPILTS 127
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG +E+ + L + E S T++NA S+++++ K ++LV
Sbjct: 128 GGLHFDQPPSEAAIMAQSL-QDDFAVTVRWQEGLSRTTWENATMSAAILQPQGIKRVVLV 186
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGIL 234
+ A+H+ R++ F+ G + +L + +P S F + + L E G+L
Sbjct: 187 TQAWHMPRARWSFEQAGFTVVGAPVGFLGVDNARPFAGWLPESRVFTQSGMLLNEAAGLL 246
Query: 235 IA---YYRGN 241
+ Y +G
Sbjct: 247 VYPWVYRKGQ 256
>gi|256159910|ref|ZP_05457632.1| hypothetical protein BcetM4_13019 [Brucella ceti M490/95/1]
gi|256255144|ref|ZP_05460680.1| hypothetical protein BcetB_12801 [Brucella ceti B1/94]
gi|261222341|ref|ZP_05936622.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265998306|ref|ZP_06110863.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260920925|gb|EEX87578.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262552774|gb|EEZ08764.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 264
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 58/250 (23%), Positives = 103/250 (41%), Gaps = 18/250 (7%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 15 PLTIIFLLVAIGLLAVWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG G + + + RI ETMRL + I++
Sbjct: 75 LPQ---HVDGIIVLG-GYMNGEIVAGRQNFELNSAADRIVETMRLARLY----PDAKILV 126
Query: 119 SGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
SGG+ + E+ LL+ G + E +S +T +NA FS ++ + G+
Sbjct: 127 SGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNTVENAIFSQALAQPKPGETW 186
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS-----ANFYLTELALKEYI 231
+LV+SAYH+ R+ F+ G + A DY L +AL+E+
Sbjct: 187 LLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWT 246
Query: 232 GILIAYYRGN 241
G+ ++ G
Sbjct: 247 GLAAYWWTGR 256
>gi|306844040|ref|ZP_07476635.1| Hypothetical protein BIBO1_0705 [Brucella sp. BO1]
gi|306275795|gb|EFM57519.1| Hypothetical protein BIBO1_0705 [Brucella sp. BO1]
Length = 264
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 61/251 (24%), Positives = 103/251 (41%), Gaps = 20/251 (7%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 15 PLTIIFLLVAIGLLAAWRGFRRVGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ-SYSRIFETMRLYKSCKQHSMHCTII 117
PQ + I++LG + I A R + RI ETMRL + II
Sbjct: 75 LPQ---HVDGIIVLGG--YMNGEIGAGRQNFELNSAADRIVETMRLARLY----PDAKII 125
Query: 118 ISGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+SGG+ + E+ L + G D E +S +T +NA FS ++ + G+
Sbjct: 126 VSGGEGTFFEKSAREAETTRALLSDLGFSGDRYIFEGKSRNTVENAIFSQALAQPKPGET 185
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS-----ANFYLTELALKEY 230
+LV+SAYH+ R+ F+ G + A DY L +AL+E+
Sbjct: 186 WLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREW 245
Query: 231 IGILIAYYRGN 241
G+ ++ G
Sbjct: 246 TGLAAYWWTGR 256
>gi|198284290|ref|YP_002220611.1| hypothetical protein Lferr_2201 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|198248811|gb|ACH84404.1| protein of unknown function DUF218 [Acidithiobacillus ferrooxidans
ATCC 53993]
Length = 264
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 54/241 (22%), Positives = 98/241 (40%), Gaps = 18/241 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L W+ IV + +L ++ + L+ F I +LL L+ Y
Sbjct: 26 LGWLAEIVGWRYL-----GRVLMLLALGTLY-FFSTAIGARLLLLPLEDRYPPLTKPLHG 79
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
I++LG G + + + + ++ R+ +L + II SGG
Sbjct: 80 ADTPQAIIVLGGGEVMQSP-GSNQETANARTLVRLLAAAQLARQ-----TGLPIIPSGGA 133
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
P+ AE++ L + + I ETQS +T NA S++++ G LV+SA
Sbjct: 134 PRLGAPAEALTMEFILRQDLGVQSTIWPETQSYNTAANATDSAAILAEHHGHQAYLVTSA 193
Query: 183 YHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIA 236
H+ R+ +F+ G+ +DY S +P + ++ A EY+G+L
Sbjct: 194 LHMPRAVAWFRRAGVKVVPVPTDYRLDRVNGLRLESWLPRAIYLEISSEASHEYLGLLWL 253
Query: 237 Y 237
+
Sbjct: 254 W 254
>gi|134096504|ref|YP_001101579.1| hypothetical protein HEAR3355 [Herminiimonas arsenicoxydans]
gi|133740407|emb|CAL63458.1| Conserved hypothetical protein; putative exported protein
[Herminiimonas arsenicoxydans]
Length = 256
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 53/242 (21%), Positives = 103/242 (42%), Gaps = 13/242 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSP 60
L++I L L + R +S L+ + + + ++ + L+ P L
Sbjct: 18 PLNFILLCALGLWLRRRWPRGGLTLSVAALIMLTVLSTRMGASLFVHPLEK--MNPPLLS 75
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
IV+LG G + P+ + R+ +L Q +++SG
Sbjct: 76 AKAAGAQAIVVLGGGRISNAPEYGGQDIPAAITLQRLRYAAKL-----QRETGLPLLVSG 130
Query: 121 GDPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G P +E+ LL+ V E S +T +NAQFSS +++ + I+LV
Sbjct: 131 GRPDGASESEAAGMARVLLDDFSVPVK--WQEEMSNNTAENAQFSSRVLRAAGVQRILLV 188
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP--LSANFYLTELALKEYIGILIAY 237
+ A H++R+++ FQ G+ + + + +A +P L + ++ AL+E++G+
Sbjct: 189 TDAIHMQRAKIAFQQAGLQVVPAATLFTSAARVTLPDFLPTSLHMASYALREWLGLAWYC 248
Query: 238 YR 239
R
Sbjct: 249 LR 250
>gi|224373337|ref|YP_002607709.1| hypothetical protein NAMH_1317 [Nautilia profundicola AmH]
gi|223588336|gb|ACM92072.1| conserved hypothetical protein [Nautilia profundicola AmH]
Length = 240
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 23/245 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L IF+I+ + + KI F S +LL++ I + LL L+ Y+ ++P
Sbjct: 12 LLPPGIFVIILFLAAIFAKKAKIVFFSAAVLLWA-ISTKFVANALLYPLEHGYKSDTITP 70
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+V+LG GT + A+ ++ R + + K I +G
Sbjct: 71 S------AVVVLGGGTNSRDVLKAM-----PDAFKREVYGLLIAKQE-----SLPYIFTG 114
Query: 121 GDPQKHGLAESIVYNNKLLESGVERD-DIKLETQSLDTFQNAQFSSSMIKNMQG-KNIIL 178
G Q AE+I + ++ D + E +SL+TFQNA++++ + + + K I L
Sbjct: 115 GGIQNIKEAENIKKDIDMILKTCNCDIETFYENRSLNTFQNAKYTAKLFEKLNLSKKIYL 174
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYL----NAYYSIIPLSANFYLTELALKEYIGIL 234
V+SAYH+KR+ + F +FG + ++ I P + NFY + A+ EY G++
Sbjct: 175 VTSAYHMKRAIMIFNNFGFQIIPKPVGFYYDNEYTFWDIFPNAGNFYHSYKAIHEYFGLI 234
Query: 235 IAYYR 239
Y R
Sbjct: 235 KTYLR 239
>gi|218667128|ref|YP_002426951.1| hypothetical protein AFE_2571 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|218519341|gb|ACK79927.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 266
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 54/241 (22%), Positives = 98/241 (40%), Gaps = 18/241 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L W+ IV + +L ++ + L+ F I +LL L+ Y
Sbjct: 28 LGWLAEIVGWRYL-----GRVLMLLALGTLY-FFSTAIGARLLLLPLEDRYPPLTKPLHG 81
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
I++LG G + + + + ++ R+ +L + II SGG
Sbjct: 82 ADTPQAIIVLGGGEVMQSP-GSNQETANARTLVRLLAAAQLARQ-----TGLPIIPSGGA 135
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
P+ AE++ L + + I ETQS +T NA S++++ G LV+SA
Sbjct: 136 PRLGAPAEALTMEFILRQDLGVQSTIWPETQSYNTAANATDSAAILAEHHGHQAYLVTSA 195
Query: 183 YHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIA 236
H+ R+ +F+ G+ +DY S +P + ++ A EY+G+L
Sbjct: 196 LHMPRAVAWFRRAGVKVVPVPTDYRLDRVNGLRLESWLPRAIYLEISSEASHEYLGLLWL 255
Query: 237 Y 237
+
Sbjct: 256 W 256
>gi|261339254|ref|ZP_05967112.1| hypothetical protein ENTCAN_05490 [Enterobacter cancerogenus ATCC
35316]
gi|288319111|gb|EFC58049.1| putative membrane protein [Enterobacter cancerogenus ATCC 35316]
Length = 259
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 83/208 (39%), Gaps = 18/208 (8%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
+ LL+ ++ Y + Q + IV+LG G T P A S R+
Sbjct: 56 QPVADGLLRPIENKYP----TWQGNQKVGYIVVLGGGYTWDPD-WAPSSNLINNSLPRLN 110
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
E +RL+ + + +I +G + + ++ + GV R I DT
Sbjct: 111 EGIRLWLA----NPGAKLIFTGAAAKTNPVSTAEAGARVAESLGVPRSSIITLDSPKDTE 166
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYS 212
+ A I ++ +LV+SA HL R+ ++F+ G++ + ++ LN +
Sbjct: 167 EEAAAVKKAIGDV---PFLLVTSASHLPRAMIFFESQGLHPLPAPANQLAITAPLNPWER 223
Query: 213 IIPLSANFYLTELALKEYIGILIAYYRG 240
IP ++ E +G + + +G
Sbjct: 224 AIPSPVWLMHSDRVGYETLGRIWQWLKG 251
>gi|23502055|ref|NP_698182.1| hypothetical protein BR1177 [Brucella suis 1330]
gi|62290089|ref|YP_221882.1| hypothetical protein BruAb1_1183 [Brucella abortus bv. 1 str.
9-941]
gi|82700013|ref|YP_414587.1| hypothetical protein BAB1_1199 [Brucella melitensis biovar Abortus
2308]
gi|225627645|ref|ZP_03785682.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237815595|ref|ZP_04594592.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|256369602|ref|YP_003107112.1| hypothetical protein BMI_I1188 [Brucella microti CCM 4915]
gi|297248487|ref|ZP_06932205.1| hypothetical protein BAYG_01444 [Brucella abortus bv. 5 str. B3196]
gi|23348011|gb|AAN30097.1| conserved hypothetical protein [Brucella suis 1330]
gi|62196221|gb|AAX74521.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616114|emb|CAJ11155.1| Protein of unknown function DUF218 [Brucella melitensis biovar
Abortus 2308]
gi|225617650|gb|EEH14695.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237788893|gb|EEP63104.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|255999764|gb|ACU48163.1| hypothetical protein BMI_I1188 [Brucella microti CCM 4915]
gi|297175656|gb|EFH35003.1| hypothetical protein BAYG_01444 [Brucella abortus bv. 5 str. B3196]
Length = 268
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 58/250 (23%), Positives = 103/250 (41%), Gaps = 18/250 (7%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 19 PLTIIFLLVAIGLLAAWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 78
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG G + + + RI ETMRL + I++
Sbjct: 79 LPQ---HVDGIIVLG-GYMNGEIVAGRQNFELNSAADRIVETMRLARLY----PDAKILV 130
Query: 119 SGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
SGG+ + E+ LL+ G + E +S +T +NA FS ++ + G+
Sbjct: 131 SGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNTVENAIFSQALAQPKPGETW 190
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS-----ANFYLTELALKEYI 231
+LV+SAYH+ R+ F+ G + A DY L +AL+E+
Sbjct: 191 LLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWT 250
Query: 232 GILIAYYRGN 241
G+ ++ G
Sbjct: 251 GLAAYWWTGR 260
>gi|238749759|ref|ZP_04611264.1| hypothetical protein yrohd0001_30790 [Yersinia rohdei ATCC 43380]
gi|238712414|gb|EEQ04627.1| hypothetical protein yrohd0001_30790 [Yersinia rohdei ATCC 43380]
Length = 255
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 55/248 (22%), Positives = 98/248 (39%), Gaps = 20/248 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ ++ W Q K F + L+ I + LL L+ Y
Sbjct: 19 VLIIMALALILLWFTRWQKSGKTLF-ALSWLILLLISLQPVADRLLLPLEKQYATY---- 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + IV+LG G T P A S R+ E +RLY++ + ++ +G
Sbjct: 74 QGNDPVDYIVVLGGGYTFNPN-WAPSANLFANSLPRVTEGIRLYRAH----PNAKLVFTG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G H + + GV +DI Q DT + A ++++ K +LV+
Sbjct: 129 GAAP-HNQSSAKTAAQVAESLGVPAEDIIALDQPKDTIEEAAAVANLV---GDKPFLLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGIL 234
SA HL R+ +F G+N + ++ L ++ IP + +E + E +G++
Sbjct: 185 SANHLPRAMNFFVAKGLNPIPAPANQLAITTPLQSWERAIPAAVYLGHSERSWYETLGLM 244
Query: 235 IAYYRGNR 242
N+
Sbjct: 245 WQKLTANK 252
>gi|17987093|ref|NP_539727.1| hypothetical protein BMEI0810 [Brucella melitensis bv. 1 str. 16M]
gi|163843442|ref|YP_001627846.1| hypothetical protein BSUIS_A1225 [Brucella suis ATCC 23445]
gi|189024327|ref|YP_001935095.1| hypothetical protein BAbS19_I11160 [Brucella abortus S19]
gi|225852674|ref|YP_002732907.1| hypothetical protein BMEA_A1222 [Brucella melitensis ATCC 23457]
gi|254689399|ref|ZP_05152653.1| hypothetical protein Babob68_04337 [Brucella abortus bv. 6 str.
870]
gi|254693883|ref|ZP_05155711.1| hypothetical protein Babob3T_04332 [Brucella abortus bv. 3 str.
Tulya]
gi|254697533|ref|ZP_05159361.1| hypothetical protein Babob28_07456 [Brucella abortus bv. 2 str.
86/8/59]
gi|254701918|ref|ZP_05163746.1| hypothetical protein Bsuib55_13827 [Brucella suis bv. 5 str. 513]
gi|254704463|ref|ZP_05166291.1| hypothetical protein Bsuib36_11145 [Brucella suis bv. 3 str. 686]
gi|254710250|ref|ZP_05172061.1| hypothetical protein BpinB_08247 [Brucella pinnipedialis B2/94]
gi|254714246|ref|ZP_05176057.1| hypothetical protein BcetM6_13021 [Brucella ceti M644/93/1]
gi|254717682|ref|ZP_05179493.1| hypothetical protein BcetM_15020 [Brucella ceti M13/05/1]
gi|254730428|ref|ZP_05189006.1| hypothetical protein Babob42_04352 [Brucella abortus bv. 4 str.
292]
gi|256031744|ref|ZP_05445358.1| hypothetical protein BpinM2_14019 [Brucella pinnipedialis
M292/94/1]
gi|256044830|ref|ZP_05447734.1| hypothetical protein Bmelb1R_10074 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256113736|ref|ZP_05454540.1| hypothetical protein Bmelb3E_13258 [Brucella melitensis bv. 3 str.
Ether]
gi|256257645|ref|ZP_05463181.1| hypothetical protein Babob9C_09914 [Brucella abortus bv. 9 str.
C68]
gi|256263835|ref|ZP_05466367.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260168877|ref|ZP_05755688.1| hypothetical protein BruF5_11021 [Brucella sp. F5/99]
gi|260546638|ref|ZP_05822377.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260565570|ref|ZP_05836054.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260754918|ref|ZP_05867266.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758135|ref|ZP_05870483.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260761961|ref|ZP_05874304.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883930|ref|ZP_05895544.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214170|ref|ZP_05928451.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261219524|ref|ZP_05933805.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261317810|ref|ZP_05957007.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261322019|ref|ZP_05961216.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261752483|ref|ZP_05996192.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261755142|ref|ZP_05998851.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261758366|ref|ZP_06002075.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265988841|ref|ZP_06101398.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265991256|ref|ZP_06103813.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265995092|ref|ZP_06107649.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17982753|gb|AAL51991.1| putative membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|163674165|gb|ABY38276.1| protein of unknown function DUF218 [Brucella suis ATCC 23445]
gi|189019899|gb|ACD72621.1| Protein of unknown function DUF218 [Brucella abortus S19]
gi|225641039|gb|ACO00953.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
gi|260095688|gb|EEW79565.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260151638|gb|EEW86732.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260668453|gb|EEX55393.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260672393|gb|EEX59214.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675026|gb|EEX61847.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260873458|gb|EEX80527.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915777|gb|EEX82638.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260924613|gb|EEX91181.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294709|gb|EEX98205.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261297033|gb|EEY00530.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261738350|gb|EEY26346.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261742236|gb|EEY30162.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261744895|gb|EEY32821.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262766205|gb|EEZ11994.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263002040|gb|EEZ14615.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093964|gb|EEZ17898.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|264661038|gb|EEZ31299.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|326409195|gb|ADZ66260.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326538905|gb|ADZ87120.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 264
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 58/250 (23%), Positives = 103/250 (41%), Gaps = 18/250 (7%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 15 PLTIIFLLVAIGLLAAWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG G + + + RI ETMRL + I++
Sbjct: 75 LPQ---HVDGIIVLG-GYMNGEIVAGRQNFELNSAADRIVETMRLARLY----PDAKILV 126
Query: 119 SGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
SGG+ + E+ LL+ G + E +S +T +NA FS ++ + G+
Sbjct: 127 SGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNTVENAIFSQALAQPKPGETW 186
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS-----ANFYLTELALKEYI 231
+LV+SAYH+ R+ F+ G + A DY L +AL+E+
Sbjct: 187 LLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWT 246
Query: 232 GILIAYYRGN 241
G+ ++ G
Sbjct: 247 GLAAYWWTGR 256
>gi|188589627|ref|YP_001922120.1| integral membrane protein [Clostridium botulinum E3 str. Alaska
E43]
gi|188499908|gb|ACD53044.1| integral membrane protein [Clostridium botulinum E3 str. Alaska
E43]
Length = 348
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 101/241 (41%), Gaps = 30/241 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L I+ + ++ + F+LL+ + L+ + + +P L
Sbjct: 108 LILYLIWSFAISSWNFPEEVKVLLGGINFILLYYLFD---VFNFLMISFLYQFNKPKL-- 162
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG+G R+ P S RI + + Y + II SG
Sbjct: 163 ----CQDFIIVLGSGLI------GERVPPLLAS--RIDKAIEFYNKQSTVTNPPKIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IIL 178
G ++E++ + G+ +D LE +S++T QN FS ++ N+ I
Sbjct: 211 GQGSDEKISEALAMQRYATQKGIPIEDTILEDKSVNTLQNMIFSKKIMDNLIPNTHASIF 270
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V++ +HL R+ ++ + G+ ++ S +A ++L ++EYI ++ Y
Sbjct: 271 VTNNFHLFRAGIFARKAGLKSQGIGS-----------KTAFYFLPNAMIREYIAFVVMYK 319
Query: 239 R 239
+
Sbjct: 320 K 320
>gi|86146468|ref|ZP_01064791.1| hypothetical protein MED222_12673 [Vibrio sp. MED222]
gi|85835731|gb|EAQ53866.1| hypothetical protein MED222_12673 [Vibrio sp. MED222]
Length = 268
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 50/245 (20%), Positives = 106/245 (43%), Gaps = 20/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L+++ L + + + + +S +F I + + + LL ++ + L
Sbjct: 19 LILAFLGLALVMFTA-KRKTGCLITLSALCGIF-LIAFQPVSSQLLMPMERQHTAFL--- 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG+G + IP E S R+ E +R+ + +I+SG
Sbjct: 74 PIDDTVDYIMVLGSGHVVDDQIPPTS-ELSRTGLMRLSEGIRILRLY----PGAKLILSG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++ + + L GV + DI L + DT++ A+ +++ +KN K ++LV+
Sbjct: 129 Y-GAGTEVSNAKMMAKVALALGVAKPDIILLETAKDTWEEARQAAAFVKN---KKMVLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ F G+ + ++YL + +P + TE E +G++
Sbjct: 185 SASHMTRALNEFNAAGMKPLPAPTNYLAQEGIVEPWNKYMPKAIYLEQTERYWHETMGLV 244
Query: 235 IAYYR 239
R
Sbjct: 245 WQSLR 249
>gi|161619130|ref|YP_001593017.1| hypothetical protein BCAN_A1197 [Brucella canis ATCC 23365]
gi|260566292|ref|ZP_05836762.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|161335941|gb|ABX62246.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
gi|260155810|gb|EEW90890.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
Length = 264
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 18/250 (7%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V L + ++ + L F + +LL L+ + +
Sbjct: 15 PLTIIFLLVVIGLLAAWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG G + + + RI ETMRL + I++
Sbjct: 75 LPQ---HVDGIIVLG-GYMNGEIVAGRQNFELNSAADRIVETMRLARLY----PDAKILV 126
Query: 119 SGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
SGG+ + E+ LL+ G + E +S +T +NA FS ++ + G+
Sbjct: 127 SGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNTVENAIFSQALAQPKPGETW 186
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS-----ANFYLTELALKEYI 231
+LV+SAYH+ R+ F+ G + A DY L +AL+E+
Sbjct: 187 LLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWT 246
Query: 232 GILIAYYRGN 241
G+ ++ G
Sbjct: 247 GLAAYWWTGR 256
>gi|238927939|ref|ZP_04659699.1| protein of hypothetical function DUF218 [Selenomonas flueggei ATCC
43531]
gi|238884272|gb|EEQ47910.1| protein of hypothetical function DUF218 [Selenomonas flueggei ATCC
43531]
Length = 253
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L+ + L V W QS R + + + G + L+ L+ +Y P +
Sbjct: 20 VLAMLGLAVYLWKRRHQS-RAAMLLCALAAMLYLLSIGAVSDRLMGELERTYPVPEV--- 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
G++I++LG G + SR+ RL+ H I++SGG
Sbjct: 76 --PQGDVIIMLGGGAIADVQDVDGMGMLAQSPSSRLLAAYRLHLR-----THLPILLSGG 128
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L GV + I++ET+SL T QNA +++ +++ + ILV+S
Sbjct: 129 QVFSDTGSEAEIARRVLRSLGVPDEMIRVETRSLTTGQNAHYTAEILRREGLMHPILVTS 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYIGILI 235
A+HL R+ L F+ GI +D+L + P + + L+E + I +
Sbjct: 189 AFHLPRAVLNFEKQGITVTPYPTDFLVSGDSQLYLLKFAPNAGALLTNTVYLQEKLRIAV 248
Query: 236 AYY 238
Y
Sbjct: 249 TRY 251
>gi|254504841|ref|ZP_05116992.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222440912|gb|EEE47591.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 268
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 100/249 (40%), Gaps = 19/249 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ L + LIVS L + R+ ++ L+ G+ +L++ L+ + RP
Sbjct: 20 IALVVVGLIVSMGTRLQKWGRRFIWVGALGLVIC--GFSPAANLLIQPLEDRFSRPAELG 77
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ +I+L G T++ A S R+ RL K + II +G
Sbjct: 78 SFN---GVIILGGAVDTVV--TGARGETALTVSGERLTIAARLAKQLPE----ALIIHTG 128
Query: 121 GDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G ES + + G+ I LE +S +T++NA + ++ G+ +L
Sbjct: 129 GQGTIITGQATESEGASRLFDDFGIASQRIILEDESRNTWENAVLTKELVDPKPGQTWLL 188
Query: 179 VSSAYHLKRSQLYFQHFGIN-TKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIG 232
V+SAYH+ RS F+ G A DY S ++ ++E+IG
Sbjct: 189 VTSAYHMPRSMGVFEAAGWTGVTAYPVDYRTRGGADWGLGFDGASKGLRRLDIGVREWIG 248
Query: 233 ILIAYYRGN 241
+ + + G
Sbjct: 249 LTVYWMTGR 257
>gi|30021293|ref|NP_832924.1| hypothetical protein BC3183 [Bacillus cereus ATCC 14579]
gi|29896847|gb|AAP10125.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579]
Length = 343
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 51/236 (21%), Positives = 104/236 (44%), Gaps = 30/236 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ +V + ++IR +++ + + L+ FI + L + + + RP
Sbjct: 109 FFLVISLVEPINFFPEAIRTLYWGAVLISLYLFID---LSNFLTAYFLYQFNRP------ 159
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K + + I++LG+G P + SRI + YK + S II SGG
Sbjct: 160 KYNQDFIIVLGSGLINDKVPPLL--------ASRINRAIEFYKKQEAVSSPPKIIFSGGQ 211
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVS 180
++E+ + +G+ ++ E +S T+QN FS ++++++G N I +
Sbjct: 212 GSDENISEAKAMQEYAVNNGIPLENTIKEDRSTTTYQNMLFSKRIMESLKGTQYNCIFST 271
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ +H+ R+ LY + G+N++ S +A +Y ++EYI I +
Sbjct: 272 NNFHVFRAGLYAKIVGLNSQGIGS-----------KTAFYYWPNAMIREYIAIFVM 316
>gi|154248380|ref|YP_001419338.1| hypothetical protein Xaut_4460 [Xanthobacter autotrophicus Py2]
gi|154162465|gb|ABS69681.1| protein of unknown function DUF218 [Xanthobacter autotrophicus Py2]
Length = 267
Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 47/250 (18%), Positives = 100/250 (40%), Gaps = 19/250 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+S + + + + ++ F G+ + +L L+ + +
Sbjct: 20 LLVSLAVVGLVLLGFRRRRLGTGLILTAVAGWLVF-GFSPVALYMLSPLEERFPQFK--- 75
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF-QSYSRIFETMRLYKSCKQHSMHCTIIIS 119
I++LG + P I +R PSF ++ R L + +
Sbjct: 76 DDGTPVTGIIMLGG--SEKPEIGNVRGLPSFGEAGERPIAFAALSRRY----PQARLAFV 129
Query: 120 GGDP---QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
GG E+ + L + G+ ++ E +S +T +NA+F+ +++K G+
Sbjct: 130 GGSGLLFPNGDAVEAQMIRMSLPDLGIPEARVEFEGKSRNTAENAEFAKALLKPKPGERW 189
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL-----SANFYLTELALKEYI 231
+LV+SA+H+ R+ F+ G + D+ A + + T++A +E+I
Sbjct: 190 LLVTSAWHMPRAVGCFRKVGFDVVPYPVDFQTAAPDRLDQPFSRAADGLDKTDVATREWI 249
Query: 232 GILIAYYRGN 241
G++ Y G
Sbjct: 250 GLVAYYLSGK 259
>gi|84388504|ref|ZP_00991051.1| hypothetical protein V12B01_06906 [Vibrio splendidus 12B01]
gi|84377053|gb|EAP93924.1| hypothetical protein V12B01_06906 [Vibrio splendidus 12B01]
Length = 284
Score = 158 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 50/245 (20%), Positives = 107/245 (43%), Gaps = 20/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L+++ L + + + + +S +F I + I + LL ++ + L
Sbjct: 19 LILAFLGLALVMFTT-KRKTGCLITLSALCGIF-LIAFQPISSQLLMPMERQHTAFL--- 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +++LG+G + IP E S R+ E +R+ + +I+SG
Sbjct: 74 PVDETIDYVMVLGSGHVVDDQIPPTS-ELSRTGLMRLSEGIRILRLY----PGAKLILSG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++ + + L GV + DI L + DT++ A+ +++ +KN K ++LV+
Sbjct: 129 Y-GAGTEVSNARMMAKVALALGVAKPDIILLETAKDTWEEARQAAAFVKN---KRMVLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ F G+ + ++YL + +P + TE E +G++
Sbjct: 185 SASHMTRALNEFHAAGMKPLPAPTNYLAQEGIVEPWNKYMPKALYLEQTERYWHETMGLM 244
Query: 235 IAYYR 239
R
Sbjct: 245 WQSLR 249
>gi|251779225|ref|ZP_04822145.1| integral membrane protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243083540|gb|EES49430.1| integral membrane protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 348
Score = 158 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 100/241 (41%), Gaps = 30/241 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L I+ + ++ + F+LL+ + L+ + + +P L
Sbjct: 108 LILYLIWSFAISSWNFPEEVKVLLGGINFILLYYLFD---VFNFLMISFLYQFNKPKL-- 162
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG+G R+ P S RI + + Y + II SG
Sbjct: 163 ----CQDFIIVLGSGLI------GERVPPLLAS--RIDKAIEFYNKQGTVTNPPKIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI--IL 178
G ++E++ + G+ +D LE +S++T QN FS ++ N I
Sbjct: 211 GQGSDEKISEALAMQRYATQKGIPIEDTILEDKSVNTLQNMIFSKKIMDNSTPNTYASIF 270
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V++ +HL R+ ++ + G+ ++ S +A ++L ++EYI ++ Y
Sbjct: 271 VTNNFHLFRAGIFARKAGLKSQGIGS-----------RTAFYFLPNAMIREYIAFVVMYK 319
Query: 239 R 239
+
Sbjct: 320 K 320
>gi|170288947|ref|YP_001739185.1| hypothetical protein TRQ2_1158 [Thermotoga sp. RQ2]
gi|170176450|gb|ACB09502.1| protein of unknown function DUF218 [Thermotoga sp. RQ2]
Length = 237
Score = 158 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 51/241 (21%), Positives = 106/241 (43%), Gaps = 24/241 (9%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWK 63
+I L++ ++ + ++ LFS + L L L+ + P P
Sbjct: 17 FILLLIVGSFFFKKARWFLLALAVTAYLFS----SYVGEFLFLWSLEKNLDVPATLP--- 69
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ +IV+LG G S + R+ +++Y+ K I+++GG
Sbjct: 70 -NDAVIVVLGGGVERN---TKAGDNLSDATLRRLLTGVQIYQKTKM-----PILVTGGSL 120
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E+++ + L+ GV + I +E +S +T++NA F+ I ++ IILV+ +
Sbjct: 121 TGL-RPEAMIMKDYLVSLGVPEEKITVEDRSRNTYENAFFTREKIGDV---PIILVTDSI 176
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNA---YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
H++R+ F+ F + + + + +P + +FYL A+ E+IG++ +R
Sbjct: 177 HMRRAVFTFKSFFQSVTPYPAGFYFGDPEFVDFLPNATSFYLNSRAIYEWIGLVWYNFRW 236
Query: 241 N 241
Sbjct: 237 R 237
>gi|148270249|ref|YP_001244709.1| hypothetical protein Tpet_1119 [Thermotoga petrophila RKU-1]
gi|281412552|ref|YP_003346631.1| protein of unknown function DUF218 [Thermotoga naphthophila RKU-10]
gi|147735793|gb|ABQ47133.1| protein of unknown function DUF218 [Thermotoga petrophila RKU-1]
gi|281373655|gb|ADA67217.1| protein of unknown function DUF218 [Thermotoga naphthophila RKU-10]
Length = 237
Score = 158 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 51/241 (21%), Positives = 106/241 (43%), Gaps = 24/241 (9%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWK 63
+I L++ ++ + ++ LFS + L L L+ + P P
Sbjct: 17 FILLLIVGSFFFKKARWFLLALAVTAYLFS----SYVGEFLFLWSLEKNLDVPATLP--- 69
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ +IV+LG G S + R+ +++Y+ K I+++GG
Sbjct: 70 -NDAVIVVLGGGVERN---TKAGDNLSDATLRRLLTGVQIYQKTKM-----PILVTGGSL 120
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E+++ + L+ GV + I +E +S +T++NA F+ I ++ IILV+ +
Sbjct: 121 TGL-RPEAMIMKDYLVSLGVPEEKITVEDRSRNTYENAFFTREKIGDV---PIILVTDSI 176
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNA---YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
H++R+ F+ F + + + + +P + +FYL A+ E+IG++ +R
Sbjct: 177 HMRRAVSTFKSFFQSVTPYPAGFYFGDPEFVDFLPNATSFYLNSRAIYEWIGLVWYNFRW 236
Query: 241 N 241
Sbjct: 237 R 237
>gi|227824083|ref|YP_002828056.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
gi|227343085|gb|ACP27303.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
Length = 261
Score = 158 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 64/247 (25%), Positives = 101/247 (40%), Gaps = 20/247 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L + LI++ +H + + F+ LF+ G L+ L+ + RP SP
Sbjct: 22 ILVGMLLILARFHRSGGVFASLGLIVLFLSLFTTTG-----PYFLQMLEDRFPRP--SPP 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IIVL G I + Q+ R E +RL K+ I++SGG
Sbjct: 75 PAEIACIIVL--GGAFENVVIASRGGMEFNQAADRFVEAVRLAKAY----PAARILVSGG 128
Query: 122 DPQKHGLAESIVYNN--KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
D G E + G+ D + E S TF+NA+++ ++ + LV
Sbjct: 129 DGSISGAYEGDARASQGFFNAFGIGADRVIREEDSRTTFENARYTKDLLAANGLERCALV 188
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGIL 234
+SAYH+ RS F+ GI +DY + + S N L A KE+ G+L
Sbjct: 189 TSAYHMPRSVGLFRANGIAVVPWPADYRTSGKVRLGFDFSQPSLNAQLATTAAKEWTGLL 248
Query: 235 IAYYRGN 241
Y G
Sbjct: 249 AYYLLGR 255
>gi|197284617|ref|YP_002150489.1| hypothetical protein PMI0723 [Proteus mirabilis HI4320]
gi|227356800|ref|ZP_03841185.1| integral membrane protein [Proteus mirabilis ATCC 29906]
gi|194682104|emb|CAR41690.1| putative membrane protein [Proteus mirabilis HI4320]
gi|227163090|gb|EEI48025.1| integral membrane protein [Proteus mirabilis ATCC 29906]
Length = 276
Score = 158 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 17/238 (7%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKK 64
F ++ W Q K ++ ++L + +G + LL + +YQ R L +
Sbjct: 24 FFALILLWFTRWQKTGK-SVLTIVIVLLTLLGMQPVADTLLMPSEKAYQARYELRENSPQ 82
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D N IV+LG G T P A S R+ E +RLY + ++I +GG
Sbjct: 83 DVNYIVVLGGGFTYNPE-WAPSANLLNNSLFRVAEGVRLY----YRYPNASLIFTGGAGV 137
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ ++ + V GV + +Q DT + A +I + +LV+SA H
Sbjct: 138 -NKISSAEVAAQVAQSLGVPAEKTIALSQPKDTEEEAYEVDKLI---GKQPFLLVTSANH 193
Query: 185 LKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGILIA 236
L R++ +F G++ + ++ L + P + F +E A E+IG +
Sbjct: 194 LARAERFFLARGMHPIVAPANQLAITTPLHPWEKYTPSAYYFQHSERAWYEFIGSIWQ 251
>gi|262275607|ref|ZP_06053416.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Grimontia hollisae CIP 101886]
gi|262219415|gb|EEY70731.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Grimontia hollisae CIP 101886]
Length = 271
Score = 158 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 102/241 (42%), Gaps = 19/241 (7%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
F + W + +L+F + + LL L+ YQ L + K+
Sbjct: 22 GFFGLFLIWFTQRKGFGSFLVFVSLLLIF-LTSFQPFTSSLLIKLERQYQPFLPT---KE 77
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ +++LG+G + +P E S + R+ E +R++ +I+SG D
Sbjct: 78 PVDYVMVLGHGHVVDDELPPTS-ELSRVALMRLMEGIRIHFMYPTS----KLILSGYDGG 132
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++ + + L GV +++I L + DT++ A ++S++ N++LV+SA H
Sbjct: 133 YE-VSHARMLARVALAMGVNKNNILLLETAKDTWEEAFQAASVV---GDSNLVLVTSANH 188
Query: 185 LKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R+ FQ+ G+N + +++ + P + E +E +G +
Sbjct: 189 MPRAVYEFQNAGLNPIPAPTNFMAQKEIRQPWIKYGPRAQYLEQFERYWQENLGQIWQRL 248
Query: 239 R 239
R
Sbjct: 249 R 249
>gi|169828730|ref|YP_001698888.1| hypothetical protein Bsph_3253 [Lysinibacillus sphaericus C3-41]
gi|168993218|gb|ACA40758.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
Length = 289
Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 31/227 (13%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
L ++ IF + + FI + L + + + RP K + + I++
Sbjct: 63 PASLFSSHLQPIFAGVSLITFYFFIH---LSNFLSAYFLYQFNRP------KYNQDFIIV 113
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG+G P + SRI + + Y S TII SGG L E+
Sbjct: 114 LGSGLINDKVPPLL--------ASRIQKAIDFYHKQATVSTPPTIIFSGGQGSDENLPEA 165
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNIILVSSAYHLKRS 188
+E G+ + E +S++T+QN FS ++ K + N I ++ +HL R+
Sbjct: 166 EAMQRYAIEKGIPIEHTLQENRSVNTYQNMLFSKQIMDDIKQGEAYNSIFTTNNFHLFRA 225
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+Y + G+N++ S +A +Y ++EY+ I++
Sbjct: 226 GIYARLAGLNSQGIGS-----------KTAFYYWPNAMIREYVAIVV 261
>gi|117619411|ref|YP_856904.1| integral membrane protein [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560818|gb|ABK37766.1| integral membrane protein [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 259
Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+G + L + L+ ++ P D IV+LGNG P +P + + + +
Sbjct: 55 MGMRPVSYELARGLEQTF--PPFEVSQHPDIEAIVVLGNGHVSDPAVPERSWQNNI-ALA 111
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R E +RL ++ Q + + +SG L+ + V + G+ R + L +
Sbjct: 112 RTLEGVRLAQAYPQAELIFSGYVSG-----DPLSNAEVNARMAVSLGIPRSRMTLFENNK 166
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-------N 208
DT A S+ ++++GK + LVSSA HL R+ +Q G+N + ++Y
Sbjct: 167 DTHDEAV---SISRHLKGKRVALVSSATHLPRAMALYQGQGLNAVPAPTNYTAKQSQVAQ 223
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
YS +P +E A+ E+IG+ A RG
Sbjct: 224 PLYSYLPKGRYLMYSEAAIHEWIGVWWARLRGQ 256
>gi|89092000|ref|ZP_01164955.1| hypothetical protein MED92_07531 [Oceanospirillum sp. MED92]
gi|89083735|gb|EAR62952.1| hypothetical protein MED92_07531 [Oceanospirillum sp. MED92]
Length = 272
Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 13/228 (5%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ +F + C +LL + + L+ L+ + +P LS + IIVL G
Sbjct: 33 WKKALGVFLVWCSVLLTIVVSQYPVANHALEPLESYFSKPNLSSLEQPLAGIIVLGGG-- 90
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVY 134
+ I F S + E + + + + +I +GG + G + V
Sbjct: 91 -EDAELSGIHGSNEFNSGA---ERLMVLPALMLRNPKLQVIYTGGSGSIFRPGYRGADVA 146
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---IILVSSAYHLKRSQLY 191
N L E G+ + +E S +T+QNA ++ +I + + +L++SA+H+ RS
Sbjct: 147 QNWLSEQGL-AGRLIIERDSRNTYQNALYTRELINELGADSQGSWLLITSAFHMPRSVGV 205
Query: 192 FQHFGINTKASCSDYLNAYYSIIPL-SANFYLTELALKEYIGILIAYY 238
F+ GI+ DY A P + N LA++E+IG+L YY
Sbjct: 206 FRKAGIDVVPYPVDYRVAENRWRPSLNRNMADLNLAVREWIGLLAYYY 253
>gi|256061258|ref|ZP_05451408.1| hypothetical protein Bneo5_12948 [Brucella neotomae 5K33]
gi|261325265|ref|ZP_05964462.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261301245|gb|EEY04742.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 264
Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 58/250 (23%), Positives = 103/250 (41%), Gaps = 18/250 (7%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 15 PLTIIFLLVAIGLLAAWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG G + + + RI ETMRL + I++
Sbjct: 75 LPQ---HVDGIIMLG-GYMNGEIVAGRQNFELNSAADRIVETMRLARLY----PDAKILV 126
Query: 119 SGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
SGG+ + E+ LL+ G + E +S +T +NA FS ++ + G+
Sbjct: 127 SGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKSRNTVENAIFSQALAQPKPGETW 186
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS-----ANFYLTELALKEYI 231
+LV+SAYH+ R+ F+ G + A DY L +AL+E+
Sbjct: 187 LLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWT 246
Query: 232 GILIAYYRGN 241
G+ ++ G
Sbjct: 247 GLAAYWWTGR 256
>gi|71280901|ref|YP_268732.1| hypothetical protein CPS_2002 [Colwellia psychrerythraea 34H]
gi|71146641|gb|AAZ27114.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
Length = 254
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 56/246 (22%), Positives = 104/246 (42%), Gaps = 22/246 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LL IF +V + QSI+ +S +++ + ++ ++ Y + +
Sbjct: 20 VLLLLIFALVVHRKKPKQSIKS---LSTAIVILLISAFAPFSDTVMTAIENDYPPYVKT- 75
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+LG G +P + S R+ E +R+Y+ II SG
Sbjct: 76 --NVSVDYIVVLGCGHNTNAELPVTSQLKTC-SLQRMVEAVRIYQ----LHPEARIITSG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ ++ + L+ GV I E DT + AQ + ++ G +ILV+
Sbjct: 129 Y-GGHNPVSNAETVKQSLILLGVPAQKIITENFPKDTEEEAQLIAPRVQ---GTQVILVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL-------NAYYSIIPLSANFYLTELALKEYIGI 233
+A H+ RS YFQ GI A+ + Y ++ IP S T +A E +G+
Sbjct: 185 NADHMPRSINYFQAEGIYPIAAPTGYWVKNPDSSKSWVHYIPTSKKLEQTTIAWYESLGL 244
Query: 234 LIAYYR 239
++ +++
Sbjct: 245 IVQWFK 250
>gi|148977536|ref|ZP_01814115.1| hypothetical protein VSWAT3_23004 [Vibrionales bacterium SWAT-3]
gi|145963187|gb|EDK28454.1| hypothetical protein VSWAT3_23004 [Vibrionales bacterium SWAT-3]
Length = 284
Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats.
Identities = 49/245 (20%), Positives = 107/245 (43%), Gaps = 20/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L+++ L + + + + +S +F I + + + LL ++ + L
Sbjct: 19 LILAFLGLALVMFTT-KRKTGCLITLSALCGIF-LIAFQPVSSQLLMPMERQHTAFL--- 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +++LG+G + IP E S R+ E +R+ + +I+SG
Sbjct: 74 PVDETVDYVMVLGSGHVVDDQIPPTS-ELSRTGLMRLSEGIRILRLY----PGAKLILSG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++ + + L GV + DI L + DT++ A+ +++ +KN K ++LV+
Sbjct: 129 Y-GAGTEVSNARMMAKVALALGVAKPDIILLETAKDTWEEARQAAAFVKN---KRMVLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ F G+ + ++YL + +P + TE E +G++
Sbjct: 185 SASHMTRALNEFNAAGMKPLPAPTNYLAQEGIVEPWNKYMPKAIYLEQTERYWHETMGLV 244
Query: 235 IAYYR 239
R
Sbjct: 245 WQSLR 249
>gi|307130843|ref|YP_003882859.1| membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Dickeya dadantii 3937]
gi|306528372|gb|ADM98302.1| Membrane Protein Functionally coupled to the MukBEF Chromosome
Partitioning Mechanism [Dickeya dadantii 3937]
Length = 259
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 100/240 (41%), Gaps = 18/240 (7%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ W Q +I ++ + + LL L+ Y P +P + K
Sbjct: 25 LALALLWFSRWQKTARILLTGGWLA-LLLLSLQPVADRLLLPLESRY--PAWTPDFPK-V 80
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
N IV+LG G T P P + +R+ E +RL+++ + +I +G Q +
Sbjct: 81 NYIVVLGGGYTFNPDWPPSANLINNN-LARVTEGIRLWRA----NPGARLIFTGAAAQGN 135
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ + GV DI L Q+ DT + A + +++ + +LV+SA HL
Sbjct: 136 PVTNASTAARVAESLGVPAQDILLVDQARDTEEEAAGTEALV---GKQPFLLVTSANHLP 192
Query: 187 RSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ +FQ G++ + ++ LN + + P + +E A E +G++ +G
Sbjct: 193 RAIRFFQARGLHPIPAPANQLAITSPLNPWERVFPSALYLSHSERAWYEGLGLIWQQMKG 252
>gi|311280166|ref|YP_003942397.1| hypothetical protein Entcl_2865 [Enterobacter cloacae SCF1]
gi|308749361|gb|ADO49113.1| protein of unknown function DUF218 [Enterobacter cloacae SCF1]
Length = 259
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWKK--DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
+ LLK ++ Y P W+ +V+LG G T P A S R
Sbjct: 56 QPVADALLKPIESRY------PTWRGATPVRYVVVLGGGYTWNPA-WAPSSNLINNSLPR 108
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ E +RL+++ + +I +G + + ++ + GV R I + D
Sbjct: 109 LTEGVRLWQA----NPGARLIFTGAAARTNPVSTAEAGARVAESLGVPRSAIIVLETPKD 164
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAY 210
T + A + + +LV+SA HL R+ ++F+H G+N + ++ LN +
Sbjct: 165 TEEEAAAVKATV---GDAPFLLVTSASHLPRAMIFFRHAGLNPLPAPANQLAIESPLNPW 221
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYRG 240
+IP ++ E +G L + +G
Sbjct: 222 ERMIPSPVWLMHSDRVGYETLGRLWQWLKG 251
>gi|330938257|gb|EGH41926.1| hypothetical protein PSYPI_05668 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 256
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 47/248 (18%), Positives = 93/248 (37%), Gaps = 16/248 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQ 61
+ ++ LI+ +W + F + + + + + L+ P
Sbjct: 16 ILFVLLILGWWLRRTRPRLAATFFAVGLGGLWLMSLPVAVEFAARKLEQVPPLPQQQWAT 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K I+ SGG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTWGT-DTPTGLGLERLRLAARLAK-----ESGLPILTSGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + E S T++NA S+++++ K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQSL-QDDFAVAVRWQEGLSRTTWENATMSAAILQPQGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ R++ F+ G + +L + +P S F + + L E G+L+
Sbjct: 189 AWHMPRARWSFEQAGFTVVGAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
Query: 237 ---YYRGN 241
Y +G
Sbjct: 249 PWIYRKGQ 256
>gi|66047577|ref|YP_237418.1| hypothetical protein Psyr_4350 [Pseudomonas syringae pv. syringae
B728a]
gi|63258284|gb|AAY39380.1| Protein of unknown function DUF218 [Pseudomonas syringae pv.
syringae B728a]
Length = 256
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 49/250 (19%), Positives = 96/250 (38%), Gaps = 20/250 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + F + + + + + L+ PL +W
Sbjct: 16 ILFVLLILGWWLRRSRPRLATAFFAVGLGGLWLMSLPVAVEFAARRLEQ--IPPLPQQRW 73
Query: 63 K---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ + IV+LGNG P+ R+ RL K I+ S
Sbjct: 74 AMLAQQADAIVVLGNGRERNSPTWGT-DTPTGLGLERLRLAARLAK-----ESGLPILTS 127
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG +E+ + L + E S T++NA S+++++ K ++LV
Sbjct: 128 GGLHFDQPPSEAAIMAQSL-QDDFAVTVRWQEGLSRTTWENATMSAAILQPQGIKRVVLV 186
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGIL 234
+ A+H+ R++ F+ G + +L + +P S F + + L E G+L
Sbjct: 187 TQAWHMPRARWSFEQAGFTVVGAPVGFLGVDNARPFGGWLPESRVFTQSGMLLNEAAGLL 246
Query: 235 IA---YYRGN 241
+ Y +G
Sbjct: 247 VYPWVYRKGQ 256
>gi|156934588|ref|YP_001438504.1| hypothetical protein ESA_02422 [Cronobacter sakazakii ATCC BAA-894]
gi|156532842|gb|ABU77668.1| hypothetical protein ESA_02422 [Cronobacter sakazakii ATCC BAA-894]
Length = 259
Score = 157 bits (398), Expect = 9e-37, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 96/243 (39%), Gaps = 21/243 (8%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK- 63
+ + ++ M+ ++ + + LLK ++ Y P W
Sbjct: 22 MMGIALALLWFTRFKQSGKVLMTASWVILLLLSLQPVADGLLKPVEDDY------PTWNG 75
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ + IV+LG G T A S R+ E +RL+ + + ++ +G
Sbjct: 76 QKADYIVVLGGGYTWND-KWAPSSNLVNNSLPRVTEGVRLWLA----NPGAKMVFTGARA 130
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ ++ + GV R DI DT + ++++ + + +LV+SA
Sbjct: 131 TTNPVSTAEAGARVAESLGVPRTDIITLDSPKDTE---EEAAAVAGALGKQPFLLVTSAS 187
Query: 184 HLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAY 237
HL R+ ++F+ G+N + ++ LN + + P S +E A E +G + +
Sbjct: 188 HLPRAMIFFKRQGLNPIPAPANQMAIDSPLNPWERVYPSSLWLMHSERAGYEILGRVWQW 247
Query: 238 YRG 240
+G
Sbjct: 248 VKG 250
>gi|315635988|ref|ZP_07891248.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315479709|gb|EFU70382.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 248
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 16/225 (7%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
KIF + F L F+ + I +++ L+ +Y +P KD I++LGNG
Sbjct: 35 KKAKIFLVLGF-LWFALLSNQTISNMIISPLENAYPALKETP---KDIKYILVLGNGHKT 90
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
P I E + + +R+ E +R YK+ + + +I+SG + + +
Sbjct: 91 NDNFP-ITSELNTTAINRLIEGIRHYKNLE----NSKLIVSGYS-FDDVNSHAQMQKKLA 144
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ GV DI DT + A + ++ + +ILV++A H+KR+ + F+ +N
Sbjct: 145 ISLGVNETDIITLDTPKDTKEEAIEAKKIV---GNQKLILVTTASHMKRAVMLFEKEDLN 201
Query: 199 TKASCSD---YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
AS ++ + + Y + + N ELA EY+G++ +Y +G
Sbjct: 202 IIASPTNHKFFTSTYPTSYFNATNIKKVELAFHEYLGMVYSYVKG 246
>gi|157736806|ref|YP_001489489.1| hypothetical protein Abu_0553 [Arcobacter butzleri RM4018]
gi|157698660|gb|ABV66820.1| conserved hypothetical protein (DUF218 domain protein) [Arcobacter
butzleri RM4018]
Length = 248
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 16/225 (7%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
KIF + F L F+ + I +++ L+ +Y +P KD I++LGNG
Sbjct: 35 KKAKIFLVLGF-LWFALLSNQTISNMIISPLENAYPALKETP---KDIKYILVLGNGHKT 90
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
P I E + + +R+ E +R YK+ + + +I+SG + + +
Sbjct: 91 NDNFP-ITSELNTTAINRLIEGIRHYKNLE----NSKLIVSGYS-FDDVNSHAQMQKKLA 144
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ GV DI DT + A + ++ + +ILV++A H+KR+ + F+ +N
Sbjct: 145 ISLGVNEADIITLDTPKDTKEEAIEAKKIV---GNQKLILVTTASHMKRAVMLFEKEDLN 201
Query: 199 TKASCSD---YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
AS ++ + + Y + + N ELA EY+G++ +Y +G
Sbjct: 202 IIASPTNHKFFTSTYPTSYFNATNIKKVELAFHEYLGMVYSYVKG 246
>gi|145299198|ref|YP_001142039.1| integral membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142851970|gb|ABO90291.1| integral membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 256
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 19/236 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K+ +C +++ + +G + L + L+ ++ P D IV+L
Sbjct: 30 WFTRFQKTGKLL-ATCSLVIVALMGMRPVSYELARGLEQTF--PPFEISQHPDIEAIVVL 86
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
GNG P IP + + + +R E +RL + Q ++ + +SG L+ +
Sbjct: 87 GNGHVSDPAIPERAWQNNI-ALARTLEGVRLALAYPQATLVFSGYVSG-----DPLSNAE 140
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V G+ER + L + DT A S+ + ++GK + LVSSA HL R+ +
Sbjct: 141 VNARMAASLGIERSRMTLFENNQDTHDEAV---SISRYLKGKQVALVSSATHLPRAMALY 197
Query: 193 QHFGINTKASCSDYL-------NAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
Q G++ + +DY YS +P +E A+ E+IG+ A RG
Sbjct: 198 QGQGLDAVPAPTDYTAKQSQVAQPLYSYLPKGRYLMYSEAAIHEWIGVWWARLRGQ 253
>gi|163857424|ref|YP_001631722.1| hypothetical protein Bpet3112 [Bordetella petrii DSM 12804]
gi|163261152|emb|CAP43454.1| conserved hypothetical protein [Bordetella petrii]
Length = 252
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 89/228 (39%), Gaps = 12/228 (5%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+R+ L + W + T L + P L + IV+LG G T
Sbjct: 29 RLRRTGAALAAFGLAWVLAWSLPATSLWLGGALESRYPHLPVAELPTADAIVVLG-GNTA 87
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ R+ ++LY++ + +++SGG + ++E+ +
Sbjct: 88 NGRANWFLPYDKETAVVRVDTAIKLYQAHR----APKVVLSGGALEG-DVSEARGMAFLM 142
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ GV D + LE S T++NA + +K I+LV+SA H+ R+ F G+
Sbjct: 143 KQQGVPEDALLLENSSRTTYENAMLTEEELKEHGFGKILLVTSALHMPRAMAAFSKQGVA 202
Query: 199 TKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ + + +P + +KEY G+L+ + RG
Sbjct: 203 AIPASTPPQIVLPPDGSVSPWLPHMRTLDASRSIIKEYAGLLVYWLRG 250
>gi|300983094|ref|ZP_07176438.1| hypothetical protein HMPREF9553_02397 [Escherichia coli MS 200-1]
gi|300306998|gb|EFJ61518.1| hypothetical protein HMPREF9553_02397 [Escherichia coli MS 200-1]
Length = 181
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 14/181 (7%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G T P A S R+ E +RL++ + +I +GG + +
Sbjct: 2 DYIVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTN 56
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
++ + V GV R+ I DT + A I +LV+SA HL
Sbjct: 57 TVSTAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAI---GDAPFLLVTSASHLP 113
Query: 187 RSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ ++FQ G+N + ++ LN + IP ++ E +G + + +G
Sbjct: 114 RAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKG 173
Query: 241 N 241
+
Sbjct: 174 S 174
>gi|289675765|ref|ZP_06496655.1| hypothetical protein PsyrpsF_21006 [Pseudomonas syringae pv.
syringae FF5]
Length = 256
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 47/248 (18%), Positives = 93/248 (37%), Gaps = 16/248 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQ 61
+ ++ LI+ +W + F + + + + + L+ P
Sbjct: 16 ILFVLLILGWWLHRTRPRLAATFFAVGLGGLWLMSLPVAVEFAARKLEQVPPLPQQQWAT 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K I+ SGG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTWGT-DTPTGLGLERLRLAARLAK-----ESGLPILTSGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L + E S T++NA S+++++ K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQSL-QDDFAVAVRWQEGLSRTTWENATMSAAILQPQGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ R++ F+ G + +L + +P S F + + L E G+L+
Sbjct: 189 AWHMPRARWSFEQAGFTVVGAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
Query: 237 ---YYRGN 241
Y +G
Sbjct: 249 PWIYRKGQ 256
>gi|92117952|ref|YP_577681.1| hypothetical protein Nham_2431 [Nitrobacter hamburgensis X14]
gi|91800846|gb|ABE63221.1| protein of unknown function DUF218 [Nitrobacter hamburgensis X14]
Length = 267
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 99/235 (42%), Gaps = 17/235 (7%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
++ + ++ ++ G+ + +LL L + P ++ II+L G
Sbjct: 31 IMKRRRAGTGLLATGVMALLIFGYSPLGNVLLLTLSERF--PAWHFDGREPDGIIILGGA 88
Query: 75 GTTIIPTIPAIRIEPSFQ-SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAES 131
I P + A R + RI + L + ++ SGG ++E+
Sbjct: 89 ---IEPELSAARKAVEVNGAAERIIGGLELARRF----PRARVVYSGGSANLIADPVSEA 141
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ L G+ + I LE++S T +NA+F+ ++ G+ +LV+SAYH+ RS
Sbjct: 142 PIAGRLLETFGISPERIVLESESRTTDENARFTRKLVSPKPGERWLLVTSAYHMPRSIGV 201
Query: 192 FQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
F+ G++ +A D+ A+ LSA + A+ E+ G+L G
Sbjct: 202 FRKAGLDVEAYPVDWRTRGWIDAWTPFDRLSAGLARADTAVHEWCGLLAYRLTGR 256
>gi|300312530|ref|YP_003776622.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
gi|300075315|gb|ADJ64714.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
Length = 269
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 46/232 (19%), Positives = 89/232 (38%), Gaps = 16/232 (6%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
H + + + + + +L+ L+ SY + IV+L
Sbjct: 48 RHAPRWRRFGLLLIVLGVATLLVLSTRVGSLLLIAPLENSYP----VLRSPGQAQAIVIL 103
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G+G + + R+ L++ I+++GG+P +E+
Sbjct: 104 GSGRIDRAPEYGGLDDANAIGMKRLQYGAYLHRQS-----GLPILVTGGNPDGSPESEAA 158
Query: 133 VYNNKL-LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
V L + V E +S T+ NA S++M+K I+LV+ + H+ R+
Sbjct: 159 VMARTLERDFAVPVR--WQEGRSNTTYDNATLSAAMLKEAGISRILLVTDSLHMPRAMQV 216
Query: 192 FQHFGINTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
F G+ +A+ + + +P +A+ L AL+E+IG L R
Sbjct: 217 FATTGLQVQAAPTVFAGQARTRVTDYLPNAASLQLASYALREWIGQLWYRVR 268
>gi|251789903|ref|YP_003004624.1| hypothetical protein Dd1591_2303 [Dickeya zeae Ech1591]
gi|247538524|gb|ACT07145.1| protein of unknown function DUF218 [Dickeya zeae Ech1591]
Length = 258
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 18/240 (7%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ W Q + ++ + + LL L+ Y P +P++ K
Sbjct: 25 LALALLWFSRWQKTARALLTGGWLA-LLLLSLQPVADKLLLPLESHY--PTWTPEFPK-V 80
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
N IV+LG G T P P + S +R+ E +RL+++ + +I +G + +
Sbjct: 81 NYIVVLGGGYTFNPDWPPSANLIN-NSLARVTEGIRLWRA----NPGAKLIFTGAAARSN 135
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ + GV DI L Q+ DT + A + ++I + +LV+SA HL
Sbjct: 136 PVTSASTSARVAESLGVPAQDILLVDQARDTEEEAAGTEALI---GKQPFLLVTSASHLP 192
Query: 187 RSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ +FQ G++ + ++ LN + + P + +E A E +G++ +G
Sbjct: 193 RAIRFFQARGLHPIPAPANQLAMTSPLNPWERVFPSALYLSHSERAWYEGLGLIWQQMKG 252
>gi|187934001|ref|YP_001887179.1| integral membrane protein [Clostridium botulinum B str. Eklund 17B]
gi|187722154|gb|ACD23375.1| integral membrane protein [Clostridium botulinum B str. Eklund 17B]
Length = 348
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 46/241 (19%), Positives = 100/241 (41%), Gaps = 30/241 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ I+ + ++ + F+LL+ + L+ + + +P L
Sbjct: 108 LIFYLIWSFAISNWNFPEEVKVLLGGINFVLLYYLFD---VFNFLMISFLYQFNKPKL-- 162
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG+G R+ P S RI + + Y + II SG
Sbjct: 163 ----CQDFIIVLGSGLI------GERVPPLLAS--RIDKAIEFYNKQGAVTNPPKIIFSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIIL 178
G ++E++ ++ G+ ++ LE +S++T QN FS ++ N I
Sbjct: 211 GQGSDEKISEALAMQRYAVQKGIPIENTILEDKSVNTLQNMMFSKKIMDNSTPNTHTSIF 270
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V++ +HL R+ ++ + G+ ++ S +A ++L ++EYI ++ Y
Sbjct: 271 VTNNFHLFRAGIFARKAGLKSQGIGS-----------KTAFYFLPNAMIREYIAFVVMYK 319
Query: 239 R 239
+
Sbjct: 320 K 320
>gi|149925438|ref|ZP_01913702.1| Uncharacterized ACR, COG1434 family protein [Limnobacter sp.
MED105]
gi|149825555|gb|EDM84763.1| Uncharacterized ACR, COG1434 family protein [Limnobacter sp.
MED105]
Length = 274
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 56/239 (23%), Positives = 99/239 (41%), Gaps = 16/239 (6%)
Query: 5 WIFL-IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
WI L + + L + ++ + L + LL L+ +
Sbjct: 29 WIALTVFAGLGLFGRGQWRVHLLVLAQLQLLAFSLPWVGDSLLGRLEDEALVLEANRPLP 88
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSF-QSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG G +R P + R+++ RLYK + I++SGG
Sbjct: 89 AQVDAIVVLGGGLEGR--FDGVRALPDLNDAGDRVWQGARLYKQ----GVATRIVLSGGQ 142
Query: 123 PQKHGLAESIV--YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
Q E+ +L+ GV D + +E S TF+NA + ++ ++I LV+
Sbjct: 143 FQTDPRKEAEAPGMKMFMLDMGVPEDALVIEDNSRTTFENAVRTRELLGER-ARSIALVT 201
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGIL 234
SA+H+ RS L+F+ G +D A++ +P + +A+KEY+G L
Sbjct: 202 SAFHMGRSVLWFEKAGFTVYPVRTDIRVLNESRAFWEWLPKPQALDESTVAIKEYLGRL 260
>gi|153000003|ref|YP_001365684.1| hypothetical protein Shew185_1471 [Shewanella baltica OS185]
gi|151364621|gb|ABS07621.1| protein of unknown function DUF218 [Shewanella baltica OS185]
Length = 248
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 111/241 (46%), Gaps = 13/241 (5%)
Query: 1 MLLSWIFLIVSY-WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
M + +I L++ + + + + +SC + F+ + L++ L+ +Y ++
Sbjct: 16 MPIPFILLLLVISFLVWRRRSMAKYLVSCAFFVLLFLSSQLGVNTLVRPLESAYP---IN 72
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+++LG+ + I A++ S + +R+ E +R +++ +I+S
Sbjct: 73 STPITGACFVMVLGSAHSDIQGATAVQ-SLSAVALARLSEGVRQLNLGQEY----KLIVS 127
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + ++ + + N +E GV++ I + DT + AQ+ + + LV
Sbjct: 128 GWGGELTQVSHAEMMANAAVELGVDKRRIIQFPLARDTIEEAQYLQW---ELGEEPFRLV 184
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA-NFYLTELALKEYIGILIAYY 238
+SA H+ R+ F G++ +A+ +D++ L+A N ++ A+ EYIG L +
Sbjct: 185 TSATHMPRAMAIFTAKGLHPEAAPTDFIGRDDFWWRLTADNLVASQRAIHEYIGRLWLWL 244
Query: 239 R 239
+
Sbjct: 245 K 245
>gi|59713611|ref|YP_206386.1| inner membrane protein [Vibrio fischeri ES114]
gi|197337496|ref|YP_002158026.1| integral membrane protein [Vibrio fischeri MJ11]
gi|59481859|gb|AAW87498.1| conserved inner membrane protein [Vibrio fischeri ES114]
gi|197314748|gb|ACH64197.1| integral membrane protein [Vibrio fischeri MJ11]
Length = 287
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 51/245 (20%), Positives = 106/245 (43%), Gaps = 20/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ +I L++ ++ + F ++ +L + + I T LLK + Y ++P
Sbjct: 19 LLIGFIGLLILWFS--KRKGFASFLLTLSLLGIFLLSFQPITTPLLKSTERIYPS-FIAP 75
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +++LGNG + I I E S + R+ E +R+Y+ M I+SG
Sbjct: 76 ETPVE--YVLVLGNGHVVDDEISPIS-ELSRAAVMRLTEGIRIYRMYPGSKM----ILSG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ ++ + + L GV++ DI L + DT + A + ++ ++LV+
Sbjct: 129 YNG-GTTVSHARMMARVALSLGVQKSDILLLESARDTHEEAIQT---FNSVGKSTLVLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGIL 234
SA H+ R+ F G++ + ++YL + P + +E E +G
Sbjct: 185 SASHMPRAMSEFHQLGMDPVPAPTNYLAHSEVKQPWDKYAPKAKYLEQSERFWYEQMGRW 244
Query: 235 IAYYR 239
+
Sbjct: 245 FMQLK 249
>gi|309390074|gb|ADO77954.1| protein of unknown function DUF218 [Halanaerobium praevalens DSM
2228]
Length = 253
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 18/246 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L+++FLI + + + IR ++ F+ + +L+ L+ +R L+
Sbjct: 20 IVLNFVFLIYLFKNKSSKLIR--LTAVFSLIFLIFLATAVGARVLVHPLENYAERNLVEV 77
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K IV+LG G+ A + PS S R+ + L++S K +I SG
Sbjct: 78 SQKYP---IVVLGGGSNY---YSAKKTTPSTHSLQRLVKGYELHRSLKT-----PLIYSG 126
Query: 121 G-DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + ++E+ + L + G++ + ET++ TF+NA + IK Q K + L
Sbjct: 127 GVAIGQQNISEADAASEFLQDLGMDLEFYFSETKAQTTFENAAYLRKWIKQHQVKKVYLF 186
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILI 235
+SAYH+ RS F+ I S ++ ++ P AL E+IG+
Sbjct: 187 TSAYHMLRSMTVFKAQQIEVLPVHSGFIYNHKLSWLDYFPSRGALNANLTALHEWIGLFW 246
Query: 236 AYYRGN 241
Y +G
Sbjct: 247 YYLKGR 252
>gi|304436974|ref|ZP_07396937.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304369925|gb|EFM23587.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 252
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L+ + L V W QS R + + + G + L+ L+ +Y P
Sbjct: 19 VLAMLGLAVYLWKRQHQS-RAAVLLCALAAMLYLLSIGAVSDRLMGELERTYPVPEA--- 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
G++I++LG G + SR+ RL+ H I++SGG
Sbjct: 75 --PQGDVIIMLGGGAIADVQDVDGTGMLAQSPSSRLLAVYRLHLR-----THLPILLSGG 127
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L GV D I +ET+SL T QNA++++ +++ + ILV+S
Sbjct: 128 QVFSDTGSEAEIARRVLRSLGVPDDMIYVETRSLTTGQNARYTAEILRREGFVHPILVTS 187
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYIGILI 235
A+HL R+ L F+ GI +D+ + P + Y + +E + ++
Sbjct: 188 AFHLPRAVLNFEKQGITVTPYPTDFWVSGDPQLYLIKFAPNAGVLYTNTVYFQEKLRTIV 247
Query: 236 AYY 238
Y
Sbjct: 248 TRY 250
>gi|209809505|ref|YP_002265043.1| hypothetical protein VSAL_II0731 [Aliivibrio salmonicida LFI1238]
gi|208011067|emb|CAQ81485.1| putative membrane protein [Aliivibrio salmonicida LFI1238]
Length = 287
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 47/243 (19%), Positives = 98/243 (40%), Gaps = 20/243 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ +I L + ++ + F ++ ++ + + I T LLK + Y +
Sbjct: 21 IGFIGLFILWFS--KRKGFASFLLTLSLVGIFLLSFQPITTPLLKSTERMYPSFIAP--- 75
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+++LGNG + I I E S + R+ E + +Y+ +I+SG
Sbjct: 76 DVPVEYVLVLGNGHVVDDEISPIS-ELSRAAVMRLTEGIHIYRMY----PGAKLILSGYS 130
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++ + + L GV + DI L + DT + A + + ++ N++LV+SA
Sbjct: 131 G-GTTVSHARMMARVALSLGVNKSDILLLENARDTHEEAIQT---LNSVGNSNLVLVTSA 186
Query: 183 YHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIA 236
H+ R+ F + G+ + ++YL + P + +E E +G
Sbjct: 187 SHMPRAMEEFHNLGLKPTPAPTNYLAHSEIKQPWEKYAPKAKYLEQSERFWYEQMGRWFM 246
Query: 237 YYR 239
+
Sbjct: 247 DLK 249
>gi|237738277|ref|ZP_04568758.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
gi|229420157|gb|EEO35204.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
Length = 252
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 104/246 (42%), Gaps = 17/246 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + I L V +L + + + + + L L+ SY ++S
Sbjct: 16 LPIIIILLFVGVGNLFKKRKKSGLVLILISIFLYLASSEVFIDKKLYDLENSYS--IISE 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + G + VLLG G T P RI +T YK + SG
Sbjct: 74 KNLEKGEVYVLLGGGII---TTTGEGNIPGIMPAVRIMKTAEYYKKYPKKIYI-----SG 125
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P ++ +ES VY +L+ GV +DI +E S +T +NA F ++ KNIIL++
Sbjct: 126 GSPLQNQESESSVYARELISLGVNSEDIIVEENSKNTNENALFIKQELEKNGIKNIILIT 185
Query: 181 SAYHLKRSQLYFQHF--GINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
SA+H+KRS F+ G+ + ++L + ++ IP N +L E IG
Sbjct: 186 SAFHMKRSMFIFEKNLDGVEIVPAPCNFLASKEKENFFYYIPKYYNLLKFQLWFWETIGN 245
Query: 234 LIAYYR 239
+ R
Sbjct: 246 IYYKIR 251
>gi|209884886|ref|YP_002288743.1| hypothetical protein OCAR_5752 [Oligotropha carboxidovorans OM5]
gi|209873082|gb|ACI92878.1| protein of unknown function [Oligotropha carboxidovorans OM5]
Length = 264
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 23/251 (9%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L++ I L+ L+ + + L G+ + LL L + P
Sbjct: 18 LVATICLLGLLLTLVRWRKAGARISAAGIALLLVCGFSPLGNWLLLPLSERF------PA 71
Query: 62 WKKDGNI---IVLLGNGTTIIPTIPAIRIEPSFQS-YSRIFETMRLYKSCKQHSMHCTII 117
W DG IV+LG I P + A R + R+ L + + I+
Sbjct: 72 WHDDGRAPDGIVVLGG--AISPDLTAERGTAELNASAERMTAAAELARRF----PNAKIV 125
Query: 118 ISGGDPQ-KHGLA-ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+SGG+ H L+ E+ V L GV D I E +S +T++NA F+ ++K G+
Sbjct: 126 LSGGNANVFHPLSTEAEVGRVLLENLGVAADRIVREDRSRNTYENAIFTRDVVKPKPGER 185
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKEY 230
+LV+SAYH+ R+ F+ +A D+ + + + LSA + A +E+
Sbjct: 186 WLLVTSAYHMPRAIGVFRAANFPVEAYPIDWRTSGWKEAGRPFLKLSAGLARLDTAAREW 245
Query: 231 IGILIAYYRGN 241
+G++ G
Sbjct: 246 VGLIGYRLAGR 256
>gi|330953011|gb|EGH53271.1| hypothetical protein PSYCIT7_16874 [Pseudomonas syringae Cit 7]
Length = 256
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 50/250 (20%), Positives = 96/250 (38%), Gaps = 20/250 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ LI+ +W + + + + + + L+ PL QW
Sbjct: 16 ILFVLLILGWWLRRSRPRLATVSFAVGLGGLWLMSLPVAVEFAARKLEQ--IPPLPQQQW 73
Query: 63 K---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ + IV+LGNG P+ R+ RL K I+ S
Sbjct: 74 ATLAQQADAIVVLGNGRERNSPTWGA-DTPTGLGLERLRLAARLAK-----ESGLPILTS 127
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG +E+ + L + E S T++NA S+++++ K ++LV
Sbjct: 128 GGLHFDQPPSEAAIMAQSL-QDDFAVTVRWQEGLSRTTWENATMSAAVLQPQGIKRVVLV 186
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGIL 234
+ A+H+ R++ F+ G ++ YL + +P S F + + L E G+L
Sbjct: 187 TQAWHMPRARWSFEQAGFTVVSAPVGYLGVDNARPFGGWLPESRVFTQSGMLLNEAAGLL 246
Query: 235 IA---YYRGN 241
+ Y +G
Sbjct: 247 VYPWIYRKGQ 256
>gi|239832066|ref|ZP_04680395.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824333|gb|EEQ95901.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 279
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 54/249 (21%), Positives = 95/249 (38%), Gaps = 18/249 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + + LF + + +LL L+ + +P P
Sbjct: 33 IISVLVLIAFLAIWRGMRGFSMGLLALSLATLF-LAAFTTLGAVLLAPLEDRFAKPDAMP 91
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ-SYSRIFETMRLYKSCKQHSMHCTIIIS 119
Q + IV+LG + I A R + RIFE MRL + +I+S
Sbjct: 92 Q---RVDGIVVLGG--YMNGEINAGRKGFELNSAADRIFEAMRLARLY----PDAKVIVS 142
Query: 120 GGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
GG+ + E+ L + G + E +S +T +NA FS + + G+ +
Sbjct: 143 GGEGAFFEKSAKEADSTRQMLADLGFSGERYIFENKSRNTVENAVFSKELAQPKPGETWL 202
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS-----ANFYLTELALKEYIG 232
LV+SAYH+ RS F+ G + A D+ L +A++E+ G
Sbjct: 203 LVTSAYHMPRSIGCFRKAGFDVVAWPVDFKTRASEHFALYLESPNEALSRFSVAMREWGG 262
Query: 233 ILIAYYRGN 241
+ + G
Sbjct: 263 LAAYWLAGK 271
>gi|146308799|ref|YP_001189264.1| hypothetical protein Pmen_3784 [Pseudomonas mendocina ymp]
gi|145577000|gb|ABP86532.1| protein of unknown function DUF218 [Pseudomonas mendocina ymp]
Length = 256
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 41/245 (16%), Positives = 96/245 (39%), Gaps = 15/245 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS- 59
++ +FL++ + + +CF+ + +P ++ + + P L+
Sbjct: 11 LMPPGLFLLLILFAWWLRRRFPRLATACFVAGVGGLWLMSLPAVVEWSARQLEREPALAE 70
Query: 60 ---PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P + + IV+LG G + +P + R+ RL ++ +
Sbjct: 71 AQWPSLAQRADAIVILGAGREQGDPGWGLVDQPGLMALERLRYAARLARAS-----GLPL 125
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+GG +E+ + + + + + E QS T++NAQ S+ +++ + +
Sbjct: 126 AATGGLHYGQPPSEAALMADVM-QRDYGLEIRWREEQSRTTWENAQLSAELLQAQGVRRV 184
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYI 231
+LV+ A+H+ R++ F+ G + +L +P S + L E +
Sbjct: 185 VLVTQAWHMPRARWCFEQAGFEVITAPMGFLSKGYERPLGGWLPESRAIWQNSQLLNEAL 244
Query: 232 GILIA 236
G+
Sbjct: 245 GLWFY 249
>gi|304409588|ref|ZP_07391208.1| protein of unknown function DUF218 [Shewanella baltica OS183]
gi|307303946|ref|ZP_07583699.1| protein of unknown function DUF218 [Shewanella baltica BA175]
gi|304352106|gb|EFM16504.1| protein of unknown function DUF218 [Shewanella baltica OS183]
gi|306912844|gb|EFN43267.1| protein of unknown function DUF218 [Shewanella baltica BA175]
Length = 233
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 109/241 (45%), Gaps = 13/241 (5%)
Query: 1 MLLSWIFLIVSY-WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
M + +I L++ + + + + +SC + F+ + L++ L+ +Y ++
Sbjct: 1 MPIPFILLLLVISFLVWRRRSMAKYLVSCAFFVLLFLSSQLGVNTLVRPLESAYP---IN 57
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+++LG+ + + A++ S + +R+ E +R C +I+S
Sbjct: 58 STPITGACFVMVLGSAHSDLQGATAVQ-SLSAVALARLSEGVR----QLNLGQECKLIVS 112
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + ++ + + N +E GV++ I + DT + AQ+ + + LV
Sbjct: 113 GWGGELTQVSHAEMMANAAVELGVDKRRIIQFPLARDTIEEAQYLQW---ELGEEPFRLV 169
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA-NFYLTELALKEYIGILIAYY 238
+SA H+ R+ F G++ +A+ +D++ L+A N ++ A+ EYIG L +
Sbjct: 170 TSATHMPRAMAIFTAKGLHPEAAATDFIGRDDFWWRLTADNLVASQRAIHEYIGRLWLWL 229
Query: 239 R 239
+
Sbjct: 230 K 230
>gi|85715468|ref|ZP_01046449.1| hypothetical protein NB311A_17224 [Nitrobacter sp. Nb-311A]
gi|85697663|gb|EAQ35539.1| hypothetical protein NB311A_17224 [Nitrobacter sp. Nb-311A]
Length = 266
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 50/240 (20%), Positives = 97/240 (40%), Gaps = 18/240 (7%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ + + + L F G+ + +LL L + P + II
Sbjct: 27 LCLTAIRWRRTGLGLLTAGIAALLIF-GYSPLSNVLLLTLSERF--PPWHFDGRAPDGII 83
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQ-SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+L G+ I P + R + R+ + L + + ++ SGG Q
Sbjct: 84 ILGGS---IQPPLSVARQTVEIDGAAERVIGGLELAQRFPE----ARVVYSGGSGQLTEG 136
Query: 129 A--ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ E+ + + G+ + I LE +S T++NA+FS ++ G+ +LV+SAYH+
Sbjct: 137 SAREAPIAGSLFERFGITPERIVLENESRTTYENARFSRELVAPKPGERWLLVTSAYHMP 196
Query: 187 RSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
RS F+ G + D+ A+ L+ ++A+ E++G+L + G
Sbjct: 197 RSIGVFRKAGFEVEPYPVDWRTRGWIDAWRPFNRLTTGLACADIAVHEWVGLLAHWMAGR 256
>gi|218661819|ref|ZP_03517749.1| hypothetical protein RetlI_21178 [Rhizobium etli IE4771]
Length = 214
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 15/206 (7%)
Query: 43 TILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
+L++ L+ + +P P+ + +++LG IE + + R E +R
Sbjct: 10 QLLMQGLEQRFPKPARDPENMQ---CMIVLGGAFENEVNTARHSIEFN-AAADRFVEALR 65
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQN 160
L + Q I++SGGD G+ E G+ +D + E QS TF+N
Sbjct: 66 LAQKFPQS----RILVSGGDGSLSGIYEGDAAASERFFPLFGIGKDRLIEERQSRTTFEN 121
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIP 215
A + + + + +L++S +H+ RS F+ GI+ +DY
Sbjct: 122 AVNTKEFLASQGLSHCLLITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRPGLDFTQ 181
Query: 216 LSANFYLTELALKEYIGILIAYYRGN 241
+ N A++E+ G++ Y G
Sbjct: 182 PNLNAQNMATAIREWYGLVGYYLAGR 207
>gi|37525579|ref|NP_928923.1| hypothetical protein plu1635 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785007|emb|CAE13928.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 279
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 45/209 (21%), Positives = 80/209 (38%), Gaps = 17/209 (8%)
Query: 39 GIIPTILLKHLQFSYQR--PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
+ LL ++ Y + + IV+LG G T P A S R
Sbjct: 56 QPVADKLLLPVESVYANSDQSDTSHINPPVDYIVVLGGGFTYNPN-WAPSSNLLNNSLPR 114
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ E +RLY+ + ++ +GG + + V GV +D T+ +D
Sbjct: 115 VTEGIRLYR----LNPGSKMVFTGGKGANVKSS-AEVAAIVAQSLGVPAEDTIALTKPMD 169
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN------AY 210
T Q A +I + ILV+SA H++R+ +FQ G+N ++ L +
Sbjct: 170 TEQEANEVEKLI---GNQPFILVTSANHMQRAITFFQQHGLNPIPGPANQLAITSPLHPW 226
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYR 239
+P + ++ E +G L +
Sbjct: 227 EKYLPSAYYLSHSDRVWYETLGTLWQRIK 255
>gi|284007579|emb|CBA73135.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 268
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 17/243 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+S+I LI+ ++ +S + +S L +G I LL + + +
Sbjct: 22 VSFIGLILLWFTHWQKSGK--CLISFSWLALLLLGIQPIADKLLLSTEAPFNKRYELLHP 79
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K+ IV+LG G T P P + S +R+ E +RLY +I +GG
Sbjct: 80 KQTIQYIVVLGGGFTYNPDWPPSANLIN-NSLARVTEGIRLYLQH----SGAKLIFTGGR 134
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ ++ + V L GV D+ T+ DT + A ++ + +LV+SA
Sbjct: 135 GN-NMISNAEVAAKVALSLGVPETDLITLTEPRDTEEEALEVEKIV---GKQPFLLVTSA 190
Query: 183 YHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIA 236
H+ R++ +F ++ + ++ L + I P + F +E A E+IG +
Sbjct: 191 NHMARAEHFFLARNMHPITAPANQLAITSPLQPWERIFPSAYYFSHSERAWYEFIGSVWQ 250
Query: 237 YYR 239
+
Sbjct: 251 AIK 253
>gi|300312046|ref|YP_003776138.1| hypothetical protein Hsero_2734 [Herbaspirillum seropedicae SmR1]
gi|300074831|gb|ADJ64230.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 263
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 105/243 (43%), Gaps = 19/243 (7%)
Query: 10 VSYWHLLCQSIRKI-----FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
++ LL + I ++ + L + I + ++++ L+ Y P+LS + +
Sbjct: 21 IAAGFLLWRRPAPIGHIGQVMVALGVALLTLICMPAVADLMVRPLEQGY--PVLSAEAAR 78
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
IV+L G+ R +P + + +R+ RL QH +++SGG+ +
Sbjct: 79 QAQAIVVLAAGSLDQAPEYEGRDQPDYVALARLRYAARL-----QHQTGLPVLVSGGNAR 133
Query: 125 KHGLAE--SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ + ++ L E +E S +T +NA S+++++ + ++LV+ A
Sbjct: 134 EETPEQNKALAMAEALREDFRTPVR-WIEGGSENTEENALRSAALLRADGVQRVLLVTDA 192
Query: 183 YHLKRSQLYFQHFGINTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H+ R+ L F G+ A+ + + + +++P + + A E++G+
Sbjct: 193 MHMPRAMLAFAQAGLVPTAAPTAFFSLPRWRWPALLPSAEGLRRSWYASYEWLGLGWYRL 252
Query: 239 RGN 241
R
Sbjct: 253 RAG 255
>gi|218682013|ref|ZP_03529614.1| hypothetical protein RetlC8_24195 [Rhizobium etli CIAT 894]
Length = 262
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 53/263 (20%), Positives = 101/263 (38%), Gaps = 35/263 (13%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIP--------------------TIL 45
+F+I + Q + FF+ L+ + W + +L
Sbjct: 1 MFVISKLVWIFAQPLSLAFFLVFLALIAGLLRWRTLSILGAAGSALILFITLYTTAGNLL 60
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
++ L+ + +P P+ + +++LG IE + + R E +RL +
Sbjct: 61 MQGLEQRFTKPAADPENLQ---CMIVLGGAFENEVNTARHGIEFN-AAADRFVEALRLAQ 116
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQNAQF 163
Q I++SGGD G+ E G+ +D + ETQS TF+NA
Sbjct: 117 KFPQS----RILVSGGDGSLSGVYEGDAAASERFFPLFGIGKDRLIEETQSRTTFENAVN 172
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSA 218
+ + + + +L++S +H+ RS F+ G +A +DY +
Sbjct: 173 TKEFLASQGLSHCLLITSGFHMPRSVGIFRKLGTRYRALPTDYRTDGAVRPGLDYTQPNL 232
Query: 219 NFYLTELALKEYIGILIAYYRGN 241
N A++E+ G++ Y G
Sbjct: 233 NAQNMATAIREWYGLVGYYLAGR 255
>gi|310780398|ref|YP_003968730.1| protein of unknown function DUF218 [Ilyobacter polytropus DSM 2926]
gi|309749721|gb|ADO84382.1| protein of unknown function DUF218 [Ilyobacter polytropus DSM 2926]
Length = 252
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 13/189 (6%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ + + G V+LG G + PS + R+ T LY S + TI
Sbjct: 70 PAAAEEIEKGEAYVVLGGGII---EKTPVGNIPSETASVRLMNTAILYNSHPK-----TI 121
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I+GG ++ES VY L+ + DI E +S T +NA+++S ++K KNI
Sbjct: 122 YITGGKVTNQQVSESSVYKKILIGLNIPDSDILTEERSRTTMENARYTSELLKKSNIKNI 181
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYI 231
+LV+SA H+ RS++ F+ G N + Y+ Y IP S N + E+
Sbjct: 182 VLVTSASHMTRSKMTFEKQGFNVVPAPCGYIQNYKNYNMLDFIPRSDNLSYFMRLIWEFA 241
Query: 232 GILIAYYRG 240
GI+ RG
Sbjct: 242 GIVYYGIRG 250
>gi|317047567|ref|YP_004115215.1| hypothetical protein Pat9b_1338 [Pantoea sp. At-9b]
gi|316949184|gb|ADU68659.1| protein of unknown function DUF218 [Pantoea sp. At-9b]
Length = 261
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 57/237 (24%), Positives = 91/237 (38%), Gaps = 23/237 (9%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG--NIIV 70
W Q KI +S L + + LL L +Y P W ++ + IV
Sbjct: 31 WFSRWQKSGKIL-ISISWLTLLLLSLQPVADRLLLPLDNAY------PTWNRNVSVDYIV 83
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G T P A S R+ E +R ++ Q M I +G + ++
Sbjct: 84 VLGGGYTFNPD-WAPSSNLIGNSLPRVAEGVRQWRRYPQAKM----IFTGAAAGNNPMSN 138
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ V GV I + Q DT + AQ + +LV+SA HL R+
Sbjct: 139 ARVAAQVAESLGVPESVIIVLDQPKDTREEAQAVKIAVGQH---PFLLVTSANHLPRAMQ 195
Query: 191 YFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+FQ G+N + ++ LN + +P +E A+ E +G RG+
Sbjct: 196 FFQGAGLNPLPAPANQMAITSPLNGWERALPSPLWLSHSERAIYETLGRAWQALRGD 252
>gi|149911645|ref|ZP_01900255.1| hypothetical protein PE36_07911 [Moritella sp. PE36]
gi|149805269|gb|EDM65284.1| hypothetical protein PE36_07911 [Moritella sp. PE36]
Length = 251
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 104/248 (41%), Gaps = 22/248 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L +I + Y + +I S F+ L + + T L L+ Y
Sbjct: 18 LLTVFILAALLYKFTRFERTAQILLFSSFITLL-LLSLAPVATRLAATLESQYPSY---- 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + I +LG+G T + +P I + + + +R E +R+YK + +I SG
Sbjct: 73 -QQQNVDYIHVLGSGHTTVDGLP-ITSQLTPAALTRTTEGVRIYK----LNPTAKLIFSG 126
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ + + + GV + I L Q DT + A + + QGK ++LV+
Sbjct: 127 YSGGDIN-SNAKMNARLAMALGVPKSAILLLEQPKDTIEEAIDNKKI---TQGKQLVLVT 182
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN-------AYYSIIPLSANFYLTELALKEYIGI 233
SA H+ R+ FQ G+ + + +++ + P + ++ + + E++G+
Sbjct: 183 SATHMPRAMKIFQQQGLFPIPAPTAHVSKPVNGTPPLHYYFPRARYLAISSMVVHEWLGL 242
Query: 234 LIAYYRGN 241
+ N
Sbjct: 243 AWLSLKNN 250
>gi|217077219|ref|YP_002334937.1| hypothetical protein THA_1144 [Thermosipho africanus TCF52B]
gi|217037074|gb|ACJ75596.1| conserved hypothetical protein [Thermosipho africanus TCF52B]
Length = 241
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 21/238 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L F +++ ++ L + FF+ ++F I L K Y + P
Sbjct: 17 ILIAFFSLLTLYYFLKKRQIWRFFLI-LSIVFYLISSPFFVYFLSKSF---YIKEKNIPD 72
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++IV+LG G T + E + R+ + +Y+ + IIISGG
Sbjct: 73 S--QNSVIVILGGGITFFDG----KYEVGNHTLKRLLKGFEIYR-----KTNAPIIISGG 121
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
G++ES + + L+ GV +DI +E ++ T +NA F S ++K +NIILV+S
Sbjct: 122 -VIGKGISESAIMKDILVTFGVNINDIIVEDKARTTKENAIFVSKLLKGKNFENIILVTS 180
Query: 182 AYHLKRSQLYFQHF-GINTKA----SCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
H+KRS + F+ + N D+ N++ +P + Y E+ GIL
Sbjct: 181 FLHMKRSIMLFEKYSKKNIIPIVCDYPIDFRNSFLDYLPSAEALYTFSQITHEFFGIL 238
>gi|300021971|ref|YP_003754582.1| hypothetical protein Hden_0439 [Hyphomicrobium denitrificans ATCC
51888]
gi|299523792|gb|ADJ22261.1| protein of unknown function DUF218 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 264
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 44/245 (17%), Positives = 99/245 (40%), Gaps = 12/245 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + + + + + ++ + G+ + L+ L+ +++ P
Sbjct: 18 LAVLLIAAGFMLYRFRPSAARWPIALGFSWLAVAGFLPLGNALVLPLEQRFEQ-RQPPLP 76
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
I++LG T + + +S R+ E +R+ + I+ +GG
Sbjct: 77 DGHLTGIIVLGGFEDGWVTSNRGGLAIN-ESAERLTEAIRIARQ----RPELKIVFTGGV 131
Query: 123 PQKHGLAES-IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
G E+ ++++G+ + + +E S DT++NA + + +LV+S
Sbjct: 132 GDLFGGFEASEAIRQYVVDAGIAPERVIIENGSRDTYENAVLTLQTLNPAPDDRWLLVTS 191
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKEYIGILIA 236
AYH+ R+ F+ G+N D+ I ++A +LA++E+IG++
Sbjct: 192 AYHMPRAVGAFRQAGLNISPFPVDFRTRDAGDILRFPISVAAGLQRADLAVREWIGLVAY 251
Query: 237 YYRGN 241
G
Sbjct: 252 RIAGR 256
>gi|310767187|gb|ADP12137.1| hypothetical protein EJP617_24560 [Erwinia sp. Ejp617]
Length = 262
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 23/239 (9%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG-- 66
+ W Q K +S L + + LL L+ Y P W
Sbjct: 27 LFLLWFSHWQKSAKTL-ISVAWLTLLLLSLQPVADRLLVPLENQY------PTWHHQHPL 79
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G T P + S R+ E +R++++ + +I +G Q +
Sbjct: 80 DYIVVLGGGYTWNPQWAPSSNMLN-NSLPRLAEGIRIWRA----NPQAKLIFTGSKAQHN 134
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
++ + + + GV I + + DT Q A + ++ N + LV+SA HL
Sbjct: 135 PMSSAALTASVAQSLGVPATAIIILDKPRDTEQEAHEVAKIVHN---QPFALVTSANHLP 191
Query: 187 RSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+ +FQ+ G+ + ++ LN + ++P S +E A+ E IG L +
Sbjct: 192 RAIRFFQYEGLQPWPAPANQLAIASPLNFWERVLPSSFWLGHSERAVYENIGRLWQRLK 250
>gi|15599180|ref|NP_252674.1| hypothetical protein PA3985 [Pseudomonas aeruginosa PAO1]
gi|107103503|ref|ZP_01367421.1| hypothetical protein PaerPA_01004573 [Pseudomonas aeruginosa PACS2]
gi|9950176|gb|AAG07372.1|AE004816_8 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Length = 253
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 88/236 (37%), Gaps = 13/236 (5%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGN 67
++W + C + + + + L+ P + +
Sbjct: 22 FFAFWWRTSRPRLARLCGVCGFFGLWLMSMPLSVEWMARWLESEPALLAEDLPGLAQRAD 81
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G PS + R+ RL K + ++ISGG
Sbjct: 82 AIVILGAGRQTNDPAWGD-DAPSLLAAERLRYAARLAK-----TSALPVLISGGLHYGRP 135
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+E+ + N LL+ E S T++NA S+ ++ + ++LV+ A+H++R
Sbjct: 136 PSEAALMANALLQDFGVPTR-WQEGLSRTTWENATLSAPQLREAGVRRVVLVTQAWHMQR 194
Query: 188 SQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ F+ G + + L + +P + F+ + + L E IG++
Sbjct: 195 ARWSFERQGFEVIPAPVGFLGGANLRPFGGWLPEAQAFWQSGMLLNEAIGLVGYRL 250
>gi|317052073|ref|YP_004113189.1| hypothetical protein Selin_1906 [Desulfurispirillum indicum S5]
gi|316947157|gb|ADU66633.1| protein of unknown function DUF218 [Desulfurispirillum indicum S5]
Length = 249
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 98/241 (40%), Gaps = 16/241 (6%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIP---TILLKHLQFSYQRPLLSPQWKK 64
L+++ LLC + ++ + + + +P L LQ Q P + + +
Sbjct: 17 LLIAVGSLLCIRSHRRLGITLWSIGLLSLLLLSLPVTSAWLHSGLQ---QHPPPTGKDIR 73
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
IV+LG G P ++ R+ L + I++SGG
Sbjct: 74 RAQAIVILGGGRDYGAPEFGAEDAPGNATWRRLAYGAHLARQS-----GLPILVSGGRVH 128
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+E+ + + L + E S T +NA++S+ +++N +I+LV+ A+H
Sbjct: 129 GELHSEAWLMDQALR-HSFGLEAQWREEHSRTTRENARYSAPILQNADITHILLVTQAWH 187
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYS----IIPLSANFYLTELALKEYIGILIAYYRG 240
L R+ F+ G+ + +D+ + IP + + + A+ E++G + G
Sbjct: 188 LPRALPEFRRQGLEVIPAPTDFASPPPGGIIAWIPRAHHLERSTQAIHEWLGKAVYRLLG 247
Query: 241 N 241
+
Sbjct: 248 S 248
>gi|163852963|ref|YP_001641006.1| hypothetical protein Mext_3555 [Methylobacterium extorquens PA1]
gi|163664568|gb|ABY31935.1| protein of unknown function DUF218 [Methylobacterium extorquens
PA1]
Length = 275
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 44/231 (19%), Positives = 96/231 (41%), Gaps = 17/231 (7%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R ++ +L +F G + L L+ + + + + I++L G +
Sbjct: 23 RRFGTGLAWAGVLATFSGLTPLANWALLPLEQRFPAQV---DDVRPVDGIIVLSGGIDLT 79
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG----LAESIVYN 135
+ R+E + + RI + L ++ +GGDP G E+++
Sbjct: 80 TSRTRGRLELN-DAGDRITALIDLAHRY----PQARLVYTGGDPYPTGGRARPTEAVLAA 134
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L G+ I +E +S T +NA +++ G+ +L++SA+H+ R+ F+
Sbjct: 135 AYLEGIGIAPARITVEARSRTTAENASEVRKLLEPHPGERWLLITSAWHMPRAMGAFRRV 194
Query: 196 GINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
G+ + D+ A ++ + +L ++A KE+ G+++ G
Sbjct: 195 GLELEPYPVDFRTAGPFATRFTFRHAADGLHLLDVAAKEWAGLVVYRLTGR 245
>gi|182678647|ref|YP_001832793.1| hypothetical protein Bind_1673 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182634530|gb|ACB95304.1| protein of unknown function DUF218 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 284
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 51/240 (21%), Positives = 93/240 (38%), Gaps = 20/240 (8%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ + W Q ++ I +LL +F+ +++ L+ + P L D
Sbjct: 30 VFTPWVKAGQRLQAI-----AILLLAFVLLTPFGAFVVRPLEDRFPNPDLH---AIDPAG 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG- 127
I++LG G + + + SR+ + L + +I +GG G
Sbjct: 82 IIVLGGGMDSRESKARGVPILN-TAGSRMTAGVELSRLF----PQAKLIFTGGSGDLMGD 136
Query: 128 -LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ESI GV + + E S +T++NA F+ +IK +LV+SA H+
Sbjct: 137 QPSESIYARELWQNLGVPAEQMVFEGNSRNTWENAVFTRDLIKPKPEDRYLLVTSAAHMP 196
Query: 187 RSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
RS F+ G N ++Y+ + + L+E+IG+L G
Sbjct: 197 RSVGIFRKVGFNVIPYNANYMTIGDARDWSVTTLAHDRLRMLSFGLREWIGLLAYRLTGK 256
>gi|332162195|ref|YP_004298772.1| hypothetical protein YE105_C2573 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325666425|gb|ADZ43069.1| hypothetical protein YE105_C2573 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862909|emb|CBX73045.1| uncharacterized protein ycbC [Yersinia enterocolitica W22703]
Length = 255
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 58/248 (23%), Positives = 96/248 (38%), Gaps = 20/248 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ ++ W Q K F ++ L I + LL L+ Y
Sbjct: 19 LLIVMGLALILLWFTRWQKSGKTLFTLSWLALL-LISLQPVADRLLLPLEKQYATY---- 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + IV+LG G T P A S R+ E +RLY++ M T
Sbjct: 74 QGNDPVDYIVVLGGGYTFNPN-WAPSANLFANSLPRVTEGIRLYRAHPNAKMVFT----- 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + + + GV DI Q DT + A ++++ K +LV+
Sbjct: 128 GSAGPNSQSSAKTAAQVAESLGVPAADIIALEQPKDTVEEAAAVAALV---GDKPFLLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGIL 234
SA HL R+ +F G++ + ++ L ++ IP +A +E A E +G+L
Sbjct: 185 SASHLPRAIKFFTAKGLHPIPAPANQLAITTPLHSWERTIPAAAYLGHSERAWYETLGLL 244
Query: 235 IAYYRGNR 242
GN+
Sbjct: 245 WQKLTGNK 252
>gi|220910044|ref|YP_002485355.1| hypothetical protein Cyan7425_4689 [Cyanothece sp. PCC 7425]
gi|219866655|gb|ACL46994.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7425]
Length = 262
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 57/254 (22%), Positives = 98/254 (38%), Gaps = 27/254 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ + L V+ + M + L + LL+ L+ P
Sbjct: 18 LACVLLGVAIVCFWKRPRWAAIAMVLSLSLLLIGSNYWVSRWLLQTLETQ-----NLPGS 72
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG P ++ R+ +LY+ K +I+SGG
Sbjct: 73 LPNAAAIVVLGGAIKGAD--PPRPWIEVAEAGDRLLYAAKLYRDGK----APLVILSGGR 126
Query: 123 PQ----KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NII 177
ES + GV + ++ SL+T+QNA ++K +I+
Sbjct: 127 ISWLSTATAAPESADMAILIETMGVPASALLQDSTSLNTYQNAVNVQKILKEKNITGSIL 186
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY-----------YSIIPLSANFYLTELA 226
LV+SA+H+ R+ F GI A+ +D+ S++P + T LA
Sbjct: 187 LVTSAFHMPRALAIFNRLGIPAIAAPTDFHTTQTAELSGAIGFLLSLLPSAETLQNTTLA 246
Query: 227 LKEYIGILIAYYRG 240
LKEY+G+++ RG
Sbjct: 247 LKEYVGLVVYRLRG 260
>gi|218889732|ref|YP_002438596.1| hypothetical protein PLES_09901 [Pseudomonas aeruginosa LESB58]
gi|254236878|ref|ZP_04930201.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254242671|ref|ZP_04935993.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|313109425|ref|ZP_07795385.1| hypothetical protein PA39016_001790025 [Pseudomonas aeruginosa
39016]
gi|126168809|gb|EAZ54320.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126196049|gb|EAZ60112.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218769955|emb|CAW25717.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
gi|310881887|gb|EFQ40481.1| hypothetical protein PA39016_001790025 [Pseudomonas aeruginosa
39016]
Length = 253
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 88/236 (37%), Gaps = 13/236 (5%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGN 67
++W + C + + + + L+ P + +
Sbjct: 22 FFAFWWRTSRPRLARLCGVCGFFGLWLMSMPLSVEWMGRWLESEPALLAEDLPGLAQRAD 81
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G PS + R+ RL K + ++ISGG
Sbjct: 82 AIVILGAGRQTNDPAWGD-DAPSLLAAERLRYAARLAK-----TSALPVLISGGLHYGRP 135
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+E+ + N LL+ E S T++NA S+ ++ + ++LV+ A+H++R
Sbjct: 136 PSEAALMANALLQDFGVPTR-WQEGLSRTTWENATLSAPQLREAGVRRVVLVTQAWHMQR 194
Query: 188 SQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ F+ G + + L + +P + F+ + + L E IG++
Sbjct: 195 ARWSFERQGFEVIPAPVGFLGGANLRPFGGWLPEAQAFWQSGMLLNEAIGLVGYRL 250
>gi|308125795|ref|ZP_07663526.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030]
gi|308113292|gb|EFO50832.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030]
Length = 187
Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ +++LGNG + IP + S + R+ E +R+ + +I+SG D
Sbjct: 6 DYVMVLGNGHVVDDEIPPTS-QLSRAALMRLTEGIRILRMY----PGAKLILSGYDGGSE 60
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
++ + + N L GV + DI L + DT++ A+ +++ ++ K I+LV+SA H+
Sbjct: 61 -ISHARMMANVALALGVAKSDIILLEDAKDTWEEARQAAAFVQQ---KEIVLVTSASHMS 116
Query: 187 RSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+ F GI + +++L + P + TEL EY+G + R
Sbjct: 117 RALYEFNAAGIKPIPAPTNFLAIDEVSQPWDKYSPKARYLEQTELFWHEYLGSVWQRLR 175
>gi|312114877|ref|YP_004012473.1| hypothetical protein Rvan_2149 [Rhodomicrobium vannielii ATCC
17100]
gi|311220006|gb|ADP71374.1| protein of unknown function DUF218 [Rhodomicrobium vannielii ATCC
17100]
Length = 276
Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 92/233 (39%), Gaps = 16/233 (6%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
Q + L + + + LL L+ + + + I++LG G +
Sbjct: 32 QRRAVALRLIVAATLLYVVAFSPLANWLLHPLEH--EVKAGTERDVAGAAGIIVLGGGVS 89
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ----KHGLAESIV 133
I P S R+ ET+RL +I SGG E+
Sbjct: 90 GAIPTEGGAI-PLGPSVERVTETLRLA----LRHPDLPVIFSGGSGLILQLSDAPNEADA 144
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
G+ ++LE +S +T +NA S++M++ + ILV+SA+H++R+ F+
Sbjct: 145 ARRFFEGFGIVAPRLRLEDRSRNTLENATLSAAMLQPKPDQRWILVTSAFHMRRAAALFE 204
Query: 194 HFGINTKASCSDYLNAYYSIIPL-----SANFYLTELALKEYIGILIAYYRGN 241
G YL + + S + ++A KE++GI +++ G+
Sbjct: 205 AQGFRVVPWPVGYLTSGTGDLRQPFGRASEGLHRIDIATKEWLGIFVSWANGD 257
>gi|170719815|ref|YP_001747503.1| hypothetical protein PputW619_0629 [Pseudomonas putida W619]
gi|169757818|gb|ACA71134.1| protein of unknown function DUF218 [Pseudomonas putida W619]
Length = 253
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 48/247 (19%), Positives = 100/247 (40%), Gaps = 15/247 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ I ++ ++ R CF+L + +P ++ + P L+
Sbjct: 11 LMPPGILFLLLLAAWWLRARRPRLAALCFVLGLGGLWLMSLPLVVQHGARLLETEPPLAS 70
Query: 61 ----QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ + + IV+LG G +PS + R+ RL K+ +
Sbjct: 71 GDWARLAQRADAIVVLGAGRERGDPAWGGEDQPSATALERMRFAARLAKAS-----GLPV 125
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+ SGG +E+ + ++L E + E S T++NAQFS+ ++K + +
Sbjct: 126 LTSGGLHYGTPPSEAQLMADRLRE-DFAVEVKWKEEASRTTWENAQFSAQLLKPLGIGRV 184
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYI 231
+LV+ A+H++RS+ F+ G + +L + ++P S + + L E +
Sbjct: 185 VLVTQAWHMQRSRWSFEQAGFEVIPAPMGFLGRDHARPFAGLLPESRAMWQSGQLLNEAV 244
Query: 232 GILIAYY 238
G+
Sbjct: 245 GLAGYRL 251
>gi|313681413|ref|YP_004059151.1| hypothetical protein Sulku_0284 [Sulfuricurvum kujiense DSM 16994]
gi|313154273|gb|ADR32951.1| protein of unknown function DUF218 [Sulfuricurvum kujiense DSM
16994]
Length = 248
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 21/244 (8%)
Query: 6 IFLIVSYWHLL-----CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
IFLI S L + KI F+ F + + + + +LLK L+ +Y + L
Sbjct: 17 IFLISSALALYLLQRGNRRRAKILFVFSFAWI-TILSYPPFSALLLKPLENAYPKVQLHS 75
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I +LGNG T IP S S +R+ E + LYKS +I SG
Sbjct: 76 PFPR---YIHVLGNGHTSSQNIPLSSEL-SLTSLARVNEGILLYKSH----PGMKLIFSG 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++ + + + GV +DI + ++ DT + A ++ + +ILV+
Sbjct: 128 Y-GGGDSVSNARKNSQLAIALGVNSNDIVILEEAKDTAEEAIAVKKIV---GSQPLILVT 183
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII---PLSANFYLTELALKEYIGILIAY 237
SA H+ R+ F+ GI + +D+L + P S +E A EY+G+L
Sbjct: 184 SASHMVRASSIFRKNGICVIEAPTDFLVKKEDTLWQFPSSGGLRRSECAFHEYLGLLWEK 243
Query: 238 YRGN 241
+G+
Sbjct: 244 LKGS 247
>gi|291616915|ref|YP_003519657.1| YcbC [Pantoea ananatis LMG 20103]
gi|291151945|gb|ADD76529.1| YcbC [Pantoea ananatis LMG 20103]
Length = 308
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 55/235 (23%), Positives = 95/235 (40%), Gaps = 19/235 (8%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
I+ W Q KI +S L+ I + LL ++ Y S + +
Sbjct: 61 ILLLWFSRWQKSGKIL-ISVSWLIILLISLQPVADRLLLPVESHYSTWNGS----QKVDY 115
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +R + + T++ +G +
Sbjct: 116 IVVLGGGYTYNPA-WAPSSNLLNNSLPRVTEGVRQW----LRNPQATMVFTGAAAGHNPK 170
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV I + Q DT Q A+ S++I + + +LV+SA H+ R+
Sbjct: 171 SNAWVAAQVAESLGVPDAHIHILDQPKDTEQEARAVSAVIGHH---SFLLVTSANHMPRA 227
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+FQ G+N A+ ++ LN + P +E A+ E +G ++
Sbjct: 228 MRFFQQAGLNPIAAPANQLAITSPLNWWERAFPSPLWMGHSERAIYETLGSVLQR 282
>gi|327393342|dbj|BAK10764.1| uncharacterized conserved protein YcbC [Pantoea ananatis AJ13355]
Length = 342
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 55/235 (23%), Positives = 94/235 (40%), Gaps = 19/235 (8%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
I+ W Q KI +S L+ I + LL ++ Y S + +
Sbjct: 111 ILLLWFSRWQKSGKIL-ISVSWLIILLISLQPVADRLLLPVESRYSTWNGS----QKVDY 165
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P A S R+ E +R + + T++ +G +
Sbjct: 166 IVVLGGGYTYNPA-WAPSSNLLNNSLPRVTEGVRQW----LRNPQATMVFTGAAAGHNPK 220
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + V GV I + Q DT Q A+ S++I + + +LV+SA H+ R+
Sbjct: 221 SNAWVAAQVAESLGVPDAHIHILDQPKDTEQEARAVSAVIGHH---SFLLVTSANHMPRA 277
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+FQ G+N A+ ++ LN + P +E A+ E +G +
Sbjct: 278 MRFFQQAGLNPIAAPANQLAITSPLNWWERAFPSPLWMGHSERAIYETLGSALQR 332
>gi|260768178|ref|ZP_05877112.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio furnissii CIP 102972]
gi|260616208|gb|EEX41393.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Vibrio furnissii CIP 102972]
gi|315179879|gb|ADT86793.1| hypothetical protein vfu_A01625 [Vibrio furnissii NCTC 11218]
Length = 269
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 54/249 (21%), Positives = 104/249 (41%), Gaps = 22/249 (8%)
Query: 1 MLLSWIFLI--VSYWHLLCQSIRKIFFMSCFMLLF--SFIGWGIIPTILLKHLQFSYQRP 56
M L + +I V ++ + RK + LF I + + + LL L+ Y
Sbjct: 13 MPLPALLIIGFVGLMLIMFTAKRKTGCLVVLFSLFGIFLISFQPVSSRLLMPLERQYSAF 72
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
L + +++LGNG + IP E S + R+ E +R+ + +
Sbjct: 73 L---PVDGTIDYVMVLGNGHVVDDQIPPTS-ELSRAALMRLAEGIRVMRMY----PGSKL 124
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I+SG + + + L GV + DI L + DT++ A+ +++ ++ + +
Sbjct: 125 ILSGYAGGSE-FSHARMLARVALALGVAKSDIILLETAKDTWEEARQAAAFVQQ---RRL 180
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEY 230
+LV+SA H++R+ F G+ + ++YL + P + TE E
Sbjct: 181 VLVTSASHMQRALNEFHSAGLQPIPAPTNYLAQASISQPWDKYTPKALYLEQTEHYWYES 240
Query: 231 IGILIAYYR 239
+G+L R
Sbjct: 241 MGMLWQSLR 249
>gi|301381971|ref|ZP_07230389.1| hypothetical protein PsyrptM_05027 [Pseudomonas syringae pv. tomato
Max13]
Length = 256
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 51/250 (20%), Positives = 100/250 (40%), Gaps = 21/250 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQ 61
+ ++ LI+ +W + R +CF + +P ++ + PL Q
Sbjct: 16 VLFLLLILGWWL---RRSRPRLATACFAAGLGGLWLMSVPVVVEFAARKMEQIPPLPQQQ 72
Query: 62 WK---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
W + + IV+LGNG P+ R+ RL K I+
Sbjct: 73 WATLAQQADAIVVLGNGRERNSPTWGA-DTPTGLGLERLRLAARLAK-----ESGLPILT 126
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+GG +E+ + L + E S T++NA+ ++++++ K ++L
Sbjct: 127 AGGLHFDQPPSEASIMAQAL-QQDFGVTVRWQEGLSRTTWENAKMTAAVLQPQGIKRVVL 185
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGI 233
V+ A+H+ R++ F+ G ++ +L + +P S F + + L E G+
Sbjct: 186 VTQAWHMPRARWSFEQAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGL 245
Query: 234 LIA--YYRGN 241
L+ YRG
Sbjct: 246 LVYPWIYRGG 255
>gi|212634481|ref|YP_002311006.1| hypothetical protein swp_1641 [Shewanella piezotolerans WP3]
gi|212555965|gb|ACJ28419.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
Length = 280
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 52/240 (21%), Positives = 108/240 (45%), Gaps = 13/240 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ LS I + V+Y + + K + ++ + + LL L+ Y ++
Sbjct: 50 VPLSIILIAVAYLVIRNLKLAKSILLIAAGMILV-LSSSMGSNALLAPLENQYS---VNN 105
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ G ++++LG+G + PA++ + S +R+ E +R C +++SG
Sbjct: 106 EPMGSGCLVMVLGSGHDEVENQPAVQ-QLSNTGLARLSEGIR----QLSLGQDCQLVVSG 160
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ A + V + +E GV + I + DT + AQF + + + LV+
Sbjct: 161 WSGGLNTRAHADVMFDAAVELGVNPNAIIKFPLAKDTIEEAQFMQWEVADAPFR---LVT 217
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAY-YSIIPLSANFYLTELALKEYIGILIAYYR 239
SA H+ RS F++ G+N A+ +D+ Y + + ++ A+ EY+G+L ++
Sbjct: 218 SASHMPRSMAIFENSGLNATAAPTDFAQRKTYWWYFDAQSLLSSQRAIHEYLGLLWFKFK 277
>gi|148560243|ref|YP_001259097.1| hypothetical protein BOV_1136 [Brucella ovis ATCC 25840]
gi|148371500|gb|ABQ61479.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 268
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 18/250 (7%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 19 PLTIIFLLVAIGLLAAWRGFRRLGIAMLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 78
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG G + + + RI ETMRL + I++
Sbjct: 79 LPQ---HVDGIIVLG-GYMNGEIVAGRQNFELNSAADRIVETMRLARLY----PDAKILV 130
Query: 119 SGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
SGG+ + E+ LL+ G + E + +T +NA FS ++ + G+
Sbjct: 131 SGGEGTFFEKSAREAETTRALLLDLGFSGNRYIFEGKLRNTVENAIFSQALAQPKPGETW 190
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS-----ANFYLTELALKEYI 231
+LV+SAYH+ R+ F+ G + A DY L +AL+E+
Sbjct: 191 LLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWT 250
Query: 232 GILIAYYRGN 241
G+ ++ G
Sbjct: 251 GLAAYWWTGR 260
>gi|318606250|emb|CBY27748.1| membrane protein functionally coupled to the MukBEF chromosome
partitioning mechanism [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 255
Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 57/248 (22%), Positives = 96/248 (38%), Gaps = 20/248 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ ++ W Q K F ++ L I + LL L+ Y
Sbjct: 19 LLIVMGLALILLWFTRWQKSGKTLFTLSWLALL-LISLQPVADRLLLPLEKQYATY---- 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG G T P A S R+ E +RLY++ M T
Sbjct: 74 QGNDPVDYIIVLGGGYTFNPN-WAPSANLFANSLPRVTEGIRLYRAHPNAKMVFT----- 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + + + GV DI Q DT + A ++++ K +LV+
Sbjct: 128 GSAGPNSQSSAKTAAQVAESLGVPAADIIALEQPKDTVEEAAAVAALV---GDKPFLLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGIL 234
SA HL R+ +F G++ + ++ L ++ IP +A +E A E +G+L
Sbjct: 185 SASHLPRAIKFFTAKGLHPIPAPANQLAITTPLHSWERTIPAAAYLGHSERAWYETLGLL 244
Query: 235 IAYYRGNR 242
GN+
Sbjct: 245 WQKLTGNK 252
>gi|114704894|ref|ZP_01437802.1| hypothetical protein FP2506_08156 [Fulvimarina pelagi HTCC2506]
gi|114539679|gb|EAU42799.1| hypothetical protein FP2506_08156 [Fulvimarina pelagi HTCC2506]
Length = 270
Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 49/249 (19%), Positives = 104/249 (41%), Gaps = 17/249 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIF--FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L++ I + + W R+ F L + + + + +L+ ++RP+
Sbjct: 16 LVAIILVAFAGWIAFLFGFRRTGKSFFVLAALSLAIVSVSPLGLAMTAYLENRFERPVPM 75
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P + + I++LG IE + ++ R ++ L ++ ++ S
Sbjct: 76 P---AEVDGIIVLGGAFDTRVARTRGVIELN-EAADRASVSVALARTY----PGADVLFS 127
Query: 120 GG--DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
GG + + E+ L G++ + +KL+ ++ DTF+NA ++ ++ G+ +
Sbjct: 128 GGVAAAFREDIPETQSAEQFYLGLGLDPNRLKLDGKARDTFENAVYAKALADPQPGETWL 187
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIG 232
LV+SAYH+ R+ F+ G + DY + + N A++EYIG
Sbjct: 188 LVTSAYHMPRAMGCFRTVGFDVVPYPVDYRTPEGADVWRPSTATTRNLEKVHFAIREYIG 247
Query: 233 ILIAYYRGN 241
+ + G
Sbjct: 248 LAAYWAAGR 256
>gi|259908912|ref|YP_002649268.1| hypothetical protein EpC_22650 [Erwinia pyrifoliae Ep1/96]
gi|224964534|emb|CAX56044.1| conserved uncharacterized protein YcbC [Erwinia pyrifoliae Ep1/96]
gi|283478907|emb|CAY74823.1| Uncharacterized protein ycbC [Erwinia pyrifoliae DSM 12163]
Length = 262
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 52/239 (21%), Positives = 95/239 (39%), Gaps = 23/239 (9%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG-- 66
+ W Q K +S L + + LL L+ Y P W
Sbjct: 27 LFLLWFSHWQKSAKTL-ISVAWLTLLLLSLQPVADRLLVPLENQY------PTWHHQHPL 79
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G T P + S R+ E +R++++ + +I +G Q +
Sbjct: 80 DYIVVLGGGYTWNPQWAPSSNMLN-NSLPRLAEGIRIWRA----NPQAKLIFTGSKAQHN 134
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
++ + + + GV I + + DT Q A + ++ N + LV+SA HL
Sbjct: 135 PMSSAALTASVAQSLGVPATAIIILDKPRDTEQEAHEVAKIVHN---QPFALVTSANHLP 191
Query: 187 RSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+ +FQ+ G+ + ++ LN + ++P S +E + E IG L +
Sbjct: 192 RAIRFFQYEGLQPWPAPANQLAISSPLNFWERVLPSSFWLGHSERVVYENIGRLWQRLK 250
>gi|150398639|ref|YP_001329106.1| hypothetical protein Smed_3453 [Sinorhizobium medicae WSM419]
gi|150030154|gb|ABR62271.1| protein of unknown function DUF218 [Sinorhizobium medicae WSM419]
Length = 262
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 16/232 (6%)
Query: 18 QSIRKIFFMSCFMLLFSFIG-WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ R +S F L FI + + L+ L+ + RP SP+ + +IVL G
Sbjct: 32 RFRRTGGGISVFGLAVLFITLFTTAGSYFLQILEDRFPRP--SPEPAELACMIVLGGAFE 89
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
++ Q+ R ET+RL ++ I++SGGD G+ E + +
Sbjct: 90 NVVMASRGGIEMN--QAAERFVETLRLARAH----PGARILVSGGDGSLSGIYEGDAHAS 143
Query: 137 KLLE--SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
G+ + + E +S TF+NA+ + +++ LV+SAYH+ RS F+
Sbjct: 144 AAFFGTFGIGPERLIREGESRTTFENARNTRHLLRENGLDRCALVTSAYHMPRSVGLFRA 203
Query: 195 FGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
I DY + S N L A KE+ G+L Y G
Sbjct: 204 NDIEVTPWPVDYRTSGKVRLGVDFTQPSLNAQLATTAAKEWTGLLAYYLLGR 255
>gi|160874624|ref|YP_001553940.1| hypothetical protein Sbal195_1507 [Shewanella baltica OS195]
gi|160860146|gb|ABX48680.1| protein of unknown function DUF218 [Shewanella baltica OS195]
Length = 248
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 45/226 (19%), Positives = 99/226 (43%), Gaps = 12/226 (5%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + + +SC + F+ + L++ L+ +Y ++ +++LG+
Sbjct: 31 VWRRRSMAKYLVSCAFFVLLFLSSQLGVNTLVRPLESAYP---INSTPITGACFVMVLGS 87
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
+ I A++ S + +R+ E +R C +I+SG + + + +
Sbjct: 88 AHSDIQGATAVQ-SLSAVALARLSEGVR----QLNLGQECKLIVSGWGGELTQFSHAEMM 142
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+E GV++ I + DT + AQ+ + + LV+SA H+ R+ F
Sbjct: 143 AKAAVELGVDKRRIIQFPLARDTIEEAQYLQW---ELGEEPFRLVTSATHMPRAMAIFTA 199
Query: 195 FGINTKASCSDYLNAYYSIIPLSA-NFYLTELALKEYIGILIAYYR 239
G++ +A+ +D++ L+A N ++ A+ EYIG L + +
Sbjct: 200 KGLHPEAAPTDFIGRDDFWWRLTADNLVASQRAIHEYIGRLWLWLK 245
>gi|299534801|ref|ZP_07048130.1| hypothetical protein BFZC1_02177 [Lysinibacillus fusiformis ZC1]
gi|298729646|gb|EFI70192.1| hypothetical protein BFZC1_02177 [Lysinibacillus fusiformis ZC1]
Length = 344
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 95/231 (41%), Gaps = 31/231 (13%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
L ++ IF + + FI + L + + + RP L + + I++
Sbjct: 118 PASLFSVHLQPIFGGISLITFYFFIH---LSNFLSAYFLYQFNRPRL------NQDFIIV 168
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG+G P + SRI + + Y + TII SGG L E+
Sbjct: 169 LGSGLINDKVPPLL--------ASRIQKAIDFYHKQAAVTTPPTIIFSGGQGPDENLPEA 220
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNIILVSSAYHLKRS 188
+E G+ + E +S++T+QN FS ++ K + N I ++ +HL R+
Sbjct: 221 EAMQRYAIEKGIPIEQTLQENRSVNTYQNMLFSKQLMDARKQGEAYNSIFTTNNFHLFRA 280
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+Y + G++++ S +A +Y ++EY+ I++ +
Sbjct: 281 GIYARLAGLDSQGIGS-----------KTAFYYWPNAMIREYVAIVVMARK 320
>gi|163749752|ref|ZP_02156998.1| hypothetical protein KT99_15255 [Shewanella benthica KT99]
gi|161330565|gb|EDQ01523.1| hypothetical protein KT99_15255 [Shewanella benthica KT99]
Length = 247
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 48/222 (21%), Positives = 99/222 (44%), Gaps = 12/222 (5%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
R F ++ +++ F+ + +L L+ Y+ ++ Q G ++++LG+G
Sbjct: 33 RKRVRFVLAVAVVILVFLTSSVGSNLLTASLENQYR---VNNQAIDAGCLVMVLGSGHDD 89
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
A+ + S + R+ E +R Y+ K C +I+SG + +
Sbjct: 90 EIPGGAV-HQLSATALVRLTEGVRQYQLGK----DCILIVSGWGGSASKTPHAKIMAEAA 144
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
++ G+ +D I + DT + AQ+ ++ LV+SA H+ RS FQ G++
Sbjct: 145 MQLGIPKDRIITFPLAKDTIEEAQYLKW---DVGSYPFRLVTSATHMPRSMAIFQGQGLS 201
Query: 199 TKASCSDYLNAYYSIIPL-SANFYLTELALKEYIGILIAYYR 239
+A+ +D++ L + N ++ A+ EY+G L +
Sbjct: 202 PEAAPTDFITRQGYWWQLDANNLLSSQRAIHEYVGRLWLTLK 243
>gi|330969451|gb|EGH69517.1| hypothetical protein PSYAR_03029 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 255
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 49/249 (19%), Positives = 94/249 (37%), Gaps = 20/249 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + LI+ +W + F + + + + + L+ PL +W
Sbjct: 16 ILFFLLILGWWLRRSRPRLATAFFAVGLGGLWLMSLPVAVEFAARRLEQ--IPPLPQQRW 73
Query: 63 K---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ + IV+LGNG P+ R+ RL K I+ S
Sbjct: 74 AMLAQQVDAIVVLGNGRERNSPTWGT-DTPTGLGLERLRLAARLAK-----ESGLPILTS 127
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG +E+ + L + E S T +NA S+++++ K ++LV
Sbjct: 128 GGLHFDQPPSEAAIMAQSL-QDDFAVTVRWQEGLSRTTRENATMSAAILQPQGIKRVVLV 186
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGIL 234
+ A+H+ R++ F+ G + +L + +P S F + + L E G+L
Sbjct: 187 TQAWHMPRARWCFEQAGFTVVGAPVGFLGVDNARPFGGWLPESRVFTQSGMLLNEAAGLL 246
Query: 235 IA---YYRG 240
+ Y +G
Sbjct: 247 VYPWIYRKG 255
>gi|157369964|ref|YP_001477953.1| hypothetical protein Spro_1721 [Serratia proteamaculans 568]
gi|157321728|gb|ABV40825.1| protein of unknown function DUF218 [Serratia proteamaculans 568]
Length = 257
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 92/235 (39%), Gaps = 20/235 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q K+ F ++ + LL+ ++ Y + N IV+L
Sbjct: 31 WFTRWQKSGKVIFTLSWLF-LLLFSLQPVADRLLRPIESEYVTY----RGNDPVNYIVVL 85
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T P A S R+ E +RLY + M T G L+ +
Sbjct: 86 GGGYTFNPD-WAPSSNLIGNSLPRVTEGVRLYLAHPGAKMVFT-----GAGSPKTLSNAA 139
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
GV R DI L + LDT Q A S ++ + ILV+SA HL R+ +F
Sbjct: 140 TAAQVAESLGVPRSDIVLLDRPLDTEQEALQVSKLVGQ---QPFILVTSANHLPRAMRFF 196
Query: 193 QHFGINTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ G++ + ++ LN + ++P + +E A E +G L +G+
Sbjct: 197 EAKGLHPIPAPANQLAISSQLNIWDRVVPSAMFLGHSERAWYETLGSLWQRLKGS 251
>gi|152985105|ref|YP_001346509.1| hypothetical protein PSPA7_1123 [Pseudomonas aeruginosa PA7]
gi|150960263|gb|ABR82288.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 253
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 89/236 (37%), Gaps = 13/236 (5%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGN 67
+++W + C + + + + ++ R P + +
Sbjct: 22 FLAFWWRDRRPRLARLCGVCGFFGLWLMSMPLSVEWMGRWIESEPALRAEDWPGLAQRAD 81
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G PS + R+ RL ++ ++ SGG
Sbjct: 82 AIVILGAGRQTSDPAWGD-DAPSLLAAERLRYAARLARAS-----SLPVLTSGGLHYGRP 135
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+E+ + N LLE E S T++NA S+ ++ + ++LV+ A+H++R
Sbjct: 136 PSEAALMANALLEDFGVPAR-WQEGLSRTTWENATLSAPQLREAGVRRVVLVTQAWHMQR 194
Query: 188 SQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ F+ G + + L + +P + F+ + + L E +G+L
Sbjct: 195 ARWSFERQGFEVIPAPVGFLGGANLRPFGGWLPEAQAFWQSGMLLNEAVGLLGYRL 250
>gi|213966840|ref|ZP_03394991.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|302058769|ref|ZP_07250310.1| hypothetical protein PsyrptK_02187 [Pseudomonas syringae pv. tomato
K40]
gi|302135145|ref|ZP_07261135.1| hypothetical protein PsyrptN_27398 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213928690|gb|EEB62234.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 256
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 51/250 (20%), Positives = 99/250 (39%), Gaps = 21/250 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQ 61
+ ++ LI+ +W + R +CF + +P ++ + PL Q
Sbjct: 16 VLFLLLILGWWL---RRSRPRLATACFAAGLGGLWLMSVPVVVEFAARKMEQIPPLPQQQ 72
Query: 62 WK---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
W + + IV+LGNG P+ R+ RL K I+
Sbjct: 73 WATLAQQADAIVVLGNGRERNSPTWGA-DTPTGLGLERLRLAARLAK-----ESGLPILT 126
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+GG +E+ + L + E S T++NA ++++++ K ++L
Sbjct: 127 AGGLHFDQPPSEASIMAQAL-QQDFGVTVRWQEGLSRTTWENATMTAAVLQPQGIKRVVL 185
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGI 233
V+ A+H+ R++ F+ G ++ +L + +P S F + + L E G+
Sbjct: 186 VTQAWHMPRARWSFEQAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGL 245
Query: 234 LIA--YYRGN 241
L+ YRG
Sbjct: 246 LVYPWIYRGG 255
>gi|126173714|ref|YP_001049863.1| hypothetical protein Sbal_1476 [Shewanella baltica OS155]
gi|125996919|gb|ABN60994.1| protein of unknown function DUF218 [Shewanella baltica OS155]
Length = 248
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 109/241 (45%), Gaps = 13/241 (5%)
Query: 1 MLLSWIFLIVSY-WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
M + +I L++ + + + + +SC L F+ + L++ L+ +Y ++
Sbjct: 16 MPIPFILLLLVISFLVWRRRSMAKYLVSCAFFLLLFLSSQLGVNTLVRQLESAYP---IN 72
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+++LG+ + I A++ S + +R+ E +R C +I+S
Sbjct: 73 STPITGACFVMVLGSAHSDIQGATAVQ-SLSAVALARLSEGVR----QLNLGQECKLIVS 127
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + ++ + + N +E GV++ I + DT + AQ+ + + LV
Sbjct: 128 GWGGELTQVSHAEMMANAAVELGVDKRRIIQFPLARDTIEEAQYLQW---ELGEEPFRLV 184
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA-NFYLTELALKEYIGILIAYY 238
+SA H+ R+ F G++ +A+ +D++ L+A N ++ A+ EYIG L +
Sbjct: 185 TSATHMPRAMAIFTAKGLHPEAAPTDFIGRDDFWWRLTADNLVASQRAIHEYIGRLWLWL 244
Query: 239 R 239
+
Sbjct: 245 K 245
>gi|330963479|gb|EGH63739.1| hypothetical protein PSYAC_02287 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 256
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 51/251 (20%), Positives = 98/251 (39%), Gaps = 21/251 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQ 61
+ ++ LI+ +W + R +CF + +P ++ + PL Q
Sbjct: 16 ILFLMLILGWWL---RRSRPRLAAACFAAGLGGLWLMSLPVVVEFAARKMEQIPPLPQQQ 72
Query: 62 WK---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
W + + IV+LGNG P+ R+ RL K I+
Sbjct: 73 WATLAQQADAIVVLGNGRERNSPTWGA-DTPTGLGLERLRLAARLAK-----ESGLPILT 126
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+GG +E+ + L + E S T++NA ++++++ K ++L
Sbjct: 127 TGGLHFDQPPSEASIMAQAL-QQDFGVTVRWQEGLSRTTWENATMTAAVLQPQGIKRVVL 185
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGI 233
V+ A+H+ R++ F+ G + +L + +P S F + + L E G+
Sbjct: 186 VTQAWHMPRARWSFEQAGFTVVGAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGL 245
Query: 234 LIA--YYRGNR 242
L+ YR R
Sbjct: 246 LVYPWIYRSGR 256
>gi|238785813|ref|ZP_04629783.1| hypothetical protein yberc0001_25450 [Yersinia bercovieri ATCC
43970]
gi|238713266|gb|EEQ05308.1| hypothetical protein yberc0001_25450 [Yersinia bercovieri ATCC
43970]
Length = 263
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 55/242 (22%), Positives = 93/242 (38%), Gaps = 20/242 (8%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
++ W Q K F ++L I + LL L+ Y Q
Sbjct: 25 LALILLWFTRWQKSGKTLFTLSWLL-LLLISLQPVADRLLLPLEKQYATY----QGNDPV 79
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G T P P S R+ E +RLY++ M T G +
Sbjct: 80 DYIVVLGGGYTFNPNWPP-SANLFANSLPRVTEGVRLYRAHPNAKMVFT-----GASTPN 133
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ + GV DI Q DT + A ++++ K +LV+SA HL
Sbjct: 134 NQSSAKTAAQVAESLGVPAADIVTLEQPKDTVEEAAAVATLV---GDKPFLLVTSASHLP 190
Query: 187 RSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ +F G++ + ++ L ++ IP +A +E A E +G++ G
Sbjct: 191 RAIKFFTAIGLHPIPAPANQLAITTPLHSWERTIPAAAYLGHSERAWYETMGLMWQKLSG 250
Query: 241 NR 242
++
Sbjct: 251 HK 252
>gi|315266865|gb|ADT93718.1| protein of unknown function DUF218 [Shewanella baltica OS678]
Length = 233
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 45/226 (19%), Positives = 99/226 (43%), Gaps = 12/226 (5%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + + +SC + F+ + L++ L+ +Y ++ +++LG+
Sbjct: 16 VWRRRSMAKYLVSCAFFVLLFLSSQLGVNTLVRPLESAYP---INSTPITGACFVMVLGS 72
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
+ I A++ S + +R+ E +R C +I+SG + + + +
Sbjct: 73 AHSDIQGATAVQ-SLSAVALARLSEGVR----QLNLGQECKLIVSGWGGELTQFSHAEMM 127
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+E GV++ I + DT + AQ+ + + LV+SA H+ R+ F
Sbjct: 128 AKAAVELGVDKRRIIQFPLARDTIEEAQYLQW---ELGEEPFRLVTSATHMPRAMAIFTA 184
Query: 195 FGINTKASCSDYLNAYYSIIPLSA-NFYLTELALKEYIGILIAYYR 239
G++ +A+ +D++ L+A N ++ A+ EYIG L + +
Sbjct: 185 KGLHPEAAPTDFIGRDDFWWRLTADNLVASQRAIHEYIGRLWLWLK 230
>gi|330505003|ref|YP_004381872.1| hypothetical protein MDS_4089 [Pseudomonas mendocina NK-01]
gi|328919289|gb|AEB60120.1| hypothetical protein MDS_4089 [Pseudomonas mendocina NK-01]
Length = 256
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 46/245 (18%), Positives = 96/245 (39%), Gaps = 15/245 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS- 59
++ I L++ + +CF+ F + +P ++ + P L
Sbjct: 11 LMPPGILLLLMLLGWWLRRRFPRLAFTCFVTGFGGLWLMSLPAVMQWSAGLLEREPALEE 70
Query: 60 ---PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ + IV+LG G +P + R+ RL ++ +
Sbjct: 71 ARWATLAQRADAIVILGAGREQNDPGWGGADQPGLMALERLRYAARLARAS-----GLPM 125
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+GG +E+ + + + + LE QS T++NA S+ +++ + +
Sbjct: 126 AATGGLHYGQPPSEAALMADAMKRDY-GLEIRWLEEQSRTTWENAVLSADLLQPQGVRRV 184
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYI 231
+LV+ A+H+ R++ F+ G ++ YL+A Y +P S + + L E I
Sbjct: 185 VLVTQAWHMPRARWSFEQAGFEVISAPMGYLSAGYARPLGGWLPESRVIWQSSQLLNEAI 244
Query: 232 GILIA 236
G+L
Sbjct: 245 GLLAY 249
>gi|146284078|ref|YP_001174231.1| transmembrane protein [Pseudomonas stutzeri A1501]
gi|145572283|gb|ABP81389.1| probable transmembrane protein [Pseudomonas stutzeri A1501]
Length = 257
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 16/228 (7%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS----PQWKKDGNIIVLLG 73
+ CF+ F+ + +P ++ + + P L Q IV+LG
Sbjct: 28 RRRSPRLAALCFVTGFTGLWLMSLPIVVEWTARAVEREPALVEARWSQLSGQAGAIVVLG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G +P + + R+ RL K+ I+ SGG +E+++
Sbjct: 88 AGREQNDPAWGG-DQPGYTALERLRYAARLAKAS-----GLPILTSGGLHYGQPPSEAML 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L LE +S T++NA FS+ M++ + ++LV+SA H+ RS+ F+
Sbjct: 142 GAEVLQRDFGVATR-WLEERSRTTWENALFSAEMLRAAGVERVVLVTSAAHMPRSRWCFE 200
Query: 194 HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
GI A+ ++ +P S F+ L L E +G+ +
Sbjct: 201 QNGIEVIAAPVGFMGGHNARPLDGWLPESKAFWQNGLLLNEVVGMAVY 248
>gi|212709800|ref|ZP_03317928.1| hypothetical protein PROVALCAL_00848 [Providencia alcalifaciens DSM
30120]
gi|212687611|gb|EEB47139.1| hypothetical protein PROVALCAL_00848 [Providencia alcalifaciens DSM
30120]
Length = 268
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 52/236 (22%), Positives = 95/236 (40%), Gaps = 19/236 (8%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR--PLLSPQWKKDGNII 69
++ +S + + +S F++ + +G I LL ++ Y + L++ +D I
Sbjct: 31 WFTRWQKSGKSLVTISLFVI--ALLGLQPISDKLLAPVEGPYNKRYELITTNPPQDIKYI 88
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG G T P S R+ E +RLY +I +GG ++
Sbjct: 89 VVLGGGFTYNPDWSPSSNL-LSNSLPRVTEGVRLYLQH----PGSKLIFTGGKASS-PIS 142
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+ V + GV D + DT + A +I + +LV+SA HL R+
Sbjct: 143 SAEVASMVAQSLGVPTADTIPLMEPKDTQEEAYEVEKII---GKQPFLLVTSANHLPRAL 199
Query: 190 LYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
F G+ + ++ LN + IP + F +E A E +G + + +
Sbjct: 200 KMFTGRGMQPYPAPANQLVITSDLNPWERYIPSAYYFSHSERAWYELLGSIWWHLK 255
>gi|237798424|ref|ZP_04586885.1| hypothetical protein POR16_06246 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021276|gb|EGI01333.1| hypothetical protein POR16_06246 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 256
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 98/241 (40%), Gaps = 18/241 (7%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL---LKHLQFSYQRPLLS-P 60
L+++ W L + R +CF++ + +P ++ + L+ + P P
Sbjct: 17 LFLLLIAAWWL--RRSRPRLAAACFIVGLGGLWLMSLPVVVEFSARQLERTTPLPRQQWP 74
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV+LGNG P+ R+ RL K I+ +G
Sbjct: 75 ILAQQADAIVVLGNGRERNSPTWGA-DTPTGLGLERLRLAARLAK-----ESGLPIMTAG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E+ + L E E QS T++NA ++ +++ + + ++LV+
Sbjct: 129 GLHFDQPPSEASIMAQSLQE-DFGVTVRWQEGQSRTTWENATMAARVLQPLGIRRVVLVT 187
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILI 235
A+H+ R++ F+ G ++ +L + +P S F + + L E G+L+
Sbjct: 188 QAWHMPRARWSFEQAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLV 247
Query: 236 A 236
Sbjct: 248 Y 248
>gi|327482395|gb|AEA85705.1| transmembrane protein [Pseudomonas stutzeri DSM 4166]
Length = 257
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 49/228 (21%), Positives = 92/228 (40%), Gaps = 16/228 (7%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWKK---DGNIIVLLG 73
+ CF+ F+ + +P ++ + L+ +W + IV+LG
Sbjct: 28 RRRSPRLAALCFVTGFTGLWLMSLPIVVEWTARAVEREPALVEARWSQLSGQAGAIVVLG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G +P + + R+ RL K+ I+ SGG +E+++
Sbjct: 88 AGREQNDPAWGG-DQPGYTALERLRYAARLAKAS-----GLPILTSGGLHYGQPPSEAML 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L LE +S T++NA FS+ M++ + ++LV+SA H+ RS+ F+
Sbjct: 142 GAEVLQRDFGVATR-WLEERSRTTWENALFSAEMLRAAGVERVVLVTSAAHMPRSRWCFE 200
Query: 194 HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
GI A+ ++ +P S F+ L L E +G+ +
Sbjct: 201 QNGIEVIAAPVGFMGGHNARPLNGWLPESKAFWQNGLLLNEVVGMAVY 248
>gi|307946395|ref|ZP_07661730.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307770059|gb|EFO29285.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 267
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 55/246 (22%), Positives = 109/246 (44%), Gaps = 14/246 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL + + V + Q + + + F+ F+F G G + IL++ L+ +Q +P+
Sbjct: 19 LLILLGVGVFFLFGKRQKLGRGLVLLSFLGFFAF-GLGPLGNILMQPLEDRFQ----TPE 73
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ I++LG + T + + + R+ +L + + + +
Sbjct: 74 DVGQIDGIIVLGGAIDTVVTNTRLLTSIN-TAAERVTVVAQLAREHPKAEVIHSGGEG-- 130
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
G +E+ L G+ER+ I LE Q+ +T++NA + ++ ++G+ +LV+S
Sbjct: 131 LLLGSGTSEAEGVLPLFLSFGIERERIILEDQARNTWENATLTKEQLEPIEGQRWLLVTS 190
Query: 182 AYHLKRSQLYFQHFGIN-TKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILI 235
AYH+ RS F+ G D A + L+ T++A+KE+IG++
Sbjct: 191 AYHMPRSVGVFEAAGWTGIVPYPVDQRTRGPQDAGRWFVGLAEGLKRTDVAVKEWIGLVA 250
Query: 236 AYYRGN 241
Y G
Sbjct: 251 YYATGR 256
>gi|127512358|ref|YP_001093555.1| hypothetical protein Shew_1429 [Shewanella loihica PV-4]
gi|126637653|gb|ABO23296.1| protein of unknown function DUF218 [Shewanella loihica PV-4]
Length = 246
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 46/240 (19%), Positives = 96/240 (40%), Gaps = 14/240 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ LS + L ++ L + K F +L L L+ Y ++
Sbjct: 15 IPLSVLCLFIAILILRRRKFVKALITLSFTILL-LASSQWGSHQLTAPLEGQYP---VNN 70
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ ++++LG+G ++ S + +R+ E +R C +++SG
Sbjct: 71 DPIENACVVMVLGSGHDSTIA-DRATLQLSATALARLTEGVR----QLSLGQDCQLVVSG 125
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ ++ V N +E GV + I + DT + AQF + LV+
Sbjct: 126 WGGSD-AVPQAQVMANAAIELGVNPERIIKFPLAKDTLEEAQFLKW---EIGDSPFRLVT 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYL-NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
SA HL R+ + F G++ + + +D++ Y + N ++ ++ EY+G +
Sbjct: 182 SATHLPRAMMIFHQAGMHPQGAPADFIARGGYWWQLDARNLLASQRSIHEYVGQTWLKIK 241
>gi|91203844|emb|CAJ71497.1| conserver hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 263
Score = 151 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 27/258 (10%)
Query: 1 MLLSWIFLIVSYWHLL--CQSIRKIFFMSCFMLLFSFIGWG-IIPTILLKHLQFSYQRPL 57
+ L LIV + + R + + +LLF+F + + + ++ L++ Y PL
Sbjct: 15 VPLCLEILIVGAVLMFFSRKQKRGKYIVLSGILLFAFFCYSSPVSKVFIRRLEYKYP-PL 73
Query: 58 LSPQWKKD--------GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
LS Q D IV+L G T P IP I S ++ R+ E +RL++ +
Sbjct: 74 LSIQSSDDTRGAIVPEVKWIVVLAGGHTSDPDIP-ITSRVSGETLVRLAEGIRLHRLVPE 132
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
I++SGG ++ + + GVE + + L+++S DT A+F ++
Sbjct: 133 S----RIVLSGGRVFD-PVSGAEAMAELAMALGVEEESLILQSESKDTHDEAKFVKPIV- 186
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLT 223
+ ILV+SA H+ R+ F+ G++ + + + A P S F
Sbjct: 187 --GNDHFILVTSANHMARAMGMFRKSGMSPIPAPAGHTILKSQTTAPGDFFPSSHGFDKA 244
Query: 224 ELALKEYIGILIAYYRGN 241
E EY+GIL A RG
Sbjct: 245 EQVFYEYLGILWALLRGQ 262
>gi|293396759|ref|ZP_06641035.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291421023|gb|EFE94276.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 268
Score = 151 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 49/209 (23%), Positives = 83/209 (39%), Gaps = 19/209 (9%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
+ LL+ ++ Y N IV+LG G T P A S R+
Sbjct: 56 QPVADRLLRPIESEYVTYNG----NDPVNYIVVLGGGYTFNP-QWAPSSNLIGNSLPRVT 110
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
E +RLY ++ +G + L+ + GV R DI + + LDT
Sbjct: 111 EGVRLY----LSHPGAKMVFTGARGA-NTLSNAETAARVAASLGVPRSDIVVLDRPLDTE 165
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYS 212
Q A + ++ + ILV+SA HL R+ +F+ G+ + ++ LN +
Sbjct: 166 QEAMQVAQLV---GKQRFILVTSANHLPRAMRFFEAQGLQPIPAPANQLAIASPLNIWDR 222
Query: 213 IIPLSANFYLTELALKEYIGILIAYYRGN 241
++P + +E A E +G L +G
Sbjct: 223 VMPSAMFLGHSERAWYETLGSLWQRLKGQ 251
>gi|330960152|gb|EGH60412.1| hypothetical protein PMA4326_16471 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 256
Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 88/228 (38%), Gaps = 16/228 (7%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTIL---LKHLQFSYQRPLLS-PQWKKDGNIIVLLG 73
+ R CF+L + +P ++ + L+ P + + IV+LG
Sbjct: 28 RRSRPRLAAGCFVLGLGGLWLMSLPVVVEFSARQLEQVPPLPQQQWATLAQQADAIVVLG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
NG P+ R+ RL K I+ +GG +E+ +
Sbjct: 88 NGRERNSPTWGA-DTPTGLGLERLRLAARLAK-----ESGLPILTTGGLHFDQPPSEAAI 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L + E S T++NA ++++++ + K ++LV+ A+H+ R++ F+
Sbjct: 142 MAQSL-QQDFGVTVRWQEGLSRTTWENATLTANVLQPLGIKRVVLVTQAWHMPRARWSFE 200
Query: 194 HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
G + +L + +P S F + + L E G+L+
Sbjct: 201 QAGFTVVGAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|28871924|ref|NP_794543.1| hypothetical protein PSPTO_4809 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28855177|gb|AAO58238.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 256
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 52/250 (20%), Positives = 100/250 (40%), Gaps = 21/250 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQ 61
+ ++ LI+ +W + R +CF + +P ++ + RPL Q
Sbjct: 16 VLFLLLILGWWL---RRSRPRLATACFAAGLGGLWLMSVPVVVEFAARKMEQIRPLPQQQ 72
Query: 62 WK---KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
W + + IV+LGNG P+ R+ RL K I+
Sbjct: 73 WATLAQQADAIVVLGNGRERNSPTWGA-DTPTGLGLERLRLAARLAK-----ESGLPILT 126
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+GG +E+ + L + E S T++NA ++++++ K ++L
Sbjct: 127 AGGLHFDQPPSEASIMAQAL-QQDFGVTVRWQEGLSRTTWENATMTAAVLQPQGIKRVVL 185
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGI 233
V+ A+H+ R++ F+ G ++ +L + +P S F + + L E G+
Sbjct: 186 VTQAWHMSRARWSFEQAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGL 245
Query: 234 LIA--YYRGN 241
L+ YRG
Sbjct: 246 LVYPWIYRGG 255
>gi|116052024|ref|YP_789133.1| hypothetical protein PA14_12270 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115587245|gb|ABJ13260.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
Length = 253
Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 88/236 (37%), Gaps = 13/236 (5%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGN 67
++W + C + + + + L+ P + +
Sbjct: 22 FFAFWWRTSRPRLARLCGVCGFFGLWLMSMPLSVERMGRWLESEPALLAEDLPGLAQRAD 81
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G PS + R+ RL K + ++ISGG
Sbjct: 82 AIVILGVGRQTNDPAWGD-DAPSLLAAERLRYAARLAK-----TSALPVLISGGLHYGRP 135
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+E+ + N LL+ E S T++NA S+ ++ + ++LV+ A+H++R
Sbjct: 136 PSEAALMANALLQDFGVPTR-WQEGLSRTTWENATLSAPQLREAGVRRVVLVTQAWHMQR 194
Query: 188 SQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ F+ G + + L + +P + F+ + + L E IG++
Sbjct: 195 ARWSFERQGFEVIPAPVGFLGGANLRPFGGWLPEAQAFWQSGMLLNEAIGLVGYRL 250
>gi|157961268|ref|YP_001501302.1| hypothetical protein Spea_1442 [Shewanella pealeana ATCC 700345]
gi|157846268|gb|ABV86767.1| protein of unknown function DUF218 [Shewanella pealeana ATCC
700345]
Length = 256
Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 90/205 (43%), Gaps = 12/205 (5%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ LL L+ Y ++ Q + ++++LG+G A++ + S + +
Sbjct: 49 LSSSWGSNWLLAPLEEQYS---VNNQPIANSCLVMVLGSGHDENANFTAVQ-QLSNTALA 104
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ E +R +C +++SG + + V + +E GV I +
Sbjct: 105 RLTEGVR----QLSLGQNCKLVVSGWSGGLSTRSHADVMFDAAVELGVSPKAIIKLPLAQ 160
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-LNAYYSII 214
DT + AQF +++ + LV+SA H+ R+ F + +N A+ +D+ A Y
Sbjct: 161 DTIEEAQFMKWEVEDAPFR---LVTSASHMPRAMAIFTNAKLNVVAAPTDFAQRASYWWR 217
Query: 215 PLSANFYLTELALKEYIGILIAYYR 239
+ + ++ A+ EY+G+L +
Sbjct: 218 FDAQSLLSSQRAIHEYLGLLWFKLK 242
>gi|330721274|gb|EGG99364.1| Putative membrane protein [gamma proteobacterium IMCC2047]
Length = 256
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 79/207 (38%), Gaps = 13/207 (6%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L K L+ Y +D IV+LG+G + R+
Sbjct: 57 VSYTLGKQLE-RYPALDWQSIKDEDYQAIVVLGSGRYRAAPEYGGQDTAKPMGLVRLRYG 115
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
L++ ++++GG + E+ L E + E +S T++N
Sbjct: 116 AYLHR-----KTGLPLLVTGGAWLDDFVPEAEFMARVLEEEFL-VKATWQEPRSRTTWEN 169
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY------YSII 214
A++S + + + I+LV+ A+H+ R+ F+ G + A+ + + + I
Sbjct: 170 AKYSRELTGSDGVQKILLVTHAWHMPRALYSFERAGFDVTAAPTQFKTSNPAGGLVGDYI 229
Query: 215 PLSANFYLTELALKEYIGILIAYYRGN 241
P ++ + L E +G+L +
Sbjct: 230 PNVSSLQDSTWMLHEMLGLLWYRMTAD 256
>gi|332528861|ref|ZP_08404835.1| hypothetical protein HGR_03097 [Hylemonella gracilis ATCC 19624]
gi|332041720|gb|EGI78072.1| hypothetical protein HGR_03097 [Hylemonella gracilis ATCC 19624]
Length = 255
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 54/246 (21%), Positives = 102/246 (41%), Gaps = 13/246 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIF--FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L+W+ ++ LL + R+ + +L+ GW +P +L+ L+ +P
Sbjct: 14 PLAWVVALLFVGLLLQRRWRRTGQGLLWAALLVLLLQGWEPLPDAVLRQLEAQ--QPAPD 71
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P +++LG T + R+ + L + ++ +
Sbjct: 72 PLDLSRYAGVIVLGGSTESSYVWEGHAQPALNSAAERLTAALPLLQ----REPRLVLLYT 127
Query: 120 GGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
GG+ + G +E+ +E GV + LE+ S +T NA FS+++ + + +
Sbjct: 128 GGEGELLASGPSEAERARRFYVEQGVPPARLLLESASRNTHDNAVFSAALPGVDRTRPWL 187
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDY---LNAYYSIIPLSANFYLTELALKEYIGIL 234
L++SA+H+ RS F+ G N +DY L + LS +LAL E +G+
Sbjct: 188 LITSAWHMPRSLRTFRKAGWNVTPWPTDYRAGLTTPWHQYSLSQGAAKWQLALHELLGLA 247
Query: 235 IAYYRG 240
RG
Sbjct: 248 AYRLRG 253
>gi|313500771|gb|ADR62137.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 253
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 43/231 (18%), Positives = 95/231 (41%), Gaps = 19/231 (8%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTIL---LKHLQFSYQRPLLSPQWK---KDGNIIVL 71
++ R CF + + +P ++ + L+ + PL W + + IV+
Sbjct: 28 RTRRPRLAALCFTVGLGGLWLMSLPLVVQETARVLES--EPPLAVSDWAGLARRADAIVV 85
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG G +P+ + R+ RL K+ ++ SGG +E+
Sbjct: 86 LGAGRERGDPAWGGGDQPTATALERMRFAARLAKAS-----GLPVLTSGGLHYGTPPSEA 140
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ +L E + E S T++NAQ ++ +++ + + ++LV+ A+H++RS+
Sbjct: 141 RLMAERLHE-DFAVEVKWREEASRTTWENAQLTAKVLQPLGFRRVVLVTQAWHMQRSRWS 199
Query: 192 FQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIAY 237
F+ G + +L + ++P S + + E +G++
Sbjct: 200 FEQAGFEVVPAPVGFLGRDHARPFGGLLPESRAMWQSGQLFNEVVGLMGYR 250
>gi|291278482|ref|YP_003495317.1| hypothetical protein DEFDS_0049 [Deferribacter desulfuricans SSM1]
gi|290753184|dbj|BAI79561.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 237
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 23/241 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKI-FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
++ +F++++ + I F+ L+ F+ ILL L ++ S
Sbjct: 12 LIPPGVFILINLILAFLTKEKLIKRFLIFSALIIYFLSISPTKDILLYPLIVKFEDKKCS 71
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
D + +V+LG G + S R+ E + K + II+S
Sbjct: 72 -----DFDAVVILGGGVYADGELKE-------DSLKRLVEGYLIAK-----KANKPIILS 114
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG K+ ES++ NKLL G + + I ++ S DT +NA F +I ++L+
Sbjct: 115 GGKVFKNLEPESLIMRNKLLNLGFDGE-IFIDDTSKDTNENATFVKKIIAANNFNKVLLI 173
Query: 180 SSAYHLKRSQLYFQHFGINTKASCS----DYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+S YH RS++ F+ GIN+ D + +P+++N + +KEY+GIL
Sbjct: 174 TSGYHAMRSKMLFEKHGINSCVVLVDKKIDKKYNFVDFLPVASNLHTISKVIKEYLGILY 233
Query: 236 A 236
Sbjct: 234 Y 234
>gi|312144373|ref|YP_003995819.1| protein of unknown function DUF218 [Halanaerobium sp.
'sapolanicus']
gi|311905024|gb|ADQ15465.1| protein of unknown function DUF218 [Halanaerobium sp.
'sapolanicus']
Length = 252
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 58/237 (24%), Positives = 102/237 (43%), Gaps = 17/237 (7%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLF-SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ + + I F++ L+F FI +LL L+ + + + I
Sbjct: 26 TVYLFFKSDSKLIKFLATATLIFLIFISTAFGVKVLLLPLENYAEEISVDLEEDHP---I 82
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG-L 128
V+LG G A EPS S R+ + L++ +++ II SGG H
Sbjct: 83 VVLGGGNYYKTDGSA---EPSVHSKQRLAKAYELHR-----TLNTKIIYSGGVGLGHDNF 134
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+E+ L G+E + + E Q+ T++NA + + + + I LV+SAYH+ RS
Sbjct: 135 SEADAAKEFLSGLGLESEKYESEDQARSTYENALYIKKWLNENEIERIYLVTSAYHMYRS 194
Query: 189 QLYFQHFGINTKASCS----DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
F+ I+ A S D+ ++ + +P + AL E++GI+ Y R
Sbjct: 195 ARAFRAQEIDFLAHHSGFIYDHKFSWLNYLPNRGALQVNLSALHEWVGIVWYYLRAR 251
>gi|183598370|ref|ZP_02959863.1| hypothetical protein PROSTU_01762 [Providencia stuartii ATCC 25827]
gi|188020546|gb|EDU58586.1| hypothetical protein PROSTU_01762 [Providencia stuartii ATCC 25827]
Length = 275
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 53/235 (22%), Positives = 93/235 (39%), Gaps = 18/235 (7%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY--QRPLLSPQWKKDGNIIV 70
W Q K +S +++ + +G I LL ++ ++ + L++ +D + IV
Sbjct: 31 WFTRWQKSGKA-CVSMSLIVIALLGLQPISDSLLAPVEGNFDKRYELITENPPEDVHYIV 89
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G T P + S R+ E +RLY +I +G ++
Sbjct: 90 VLGGGFTYNPDWSPSSNLLN-NSLPRVTEGVRLYLKY----PGSKLIFTG-SKANSTISS 143
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ V GV D T+ DT + A +I + +LV+SA HL R+
Sbjct: 144 AEVAAMVAQSLGVPASDTIALTEPKDTQEEAFEVEKII---GKEPFLLVTSANHLPRAIS 200
Query: 191 YFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
F G+ + ++ LN + P + F +E A E IG + Y +
Sbjct: 201 MFTARGMQPIPAPANQLAIKSALNPWEKYFPSAFYFSHSERAWYELIGSIWFYLK 255
>gi|26991472|ref|NP_746897.1| hypothetical protein PP_4792 [Pseudomonas putida KT2440]
gi|24986550|gb|AAN70361.1|AE016678_2 conserved hypothetical protein [Pseudomonas putida KT2440]
Length = 253
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 43/231 (18%), Positives = 94/231 (40%), Gaps = 19/231 (8%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTIL---LKHLQFSYQRPLLSPQWKK---DGNIIVL 71
++ R CF + + +P ++ + L+ + PL W + IV+
Sbjct: 28 RTRRPRLAALCFSVGLGGLWLMSLPLVVQETARVLES--EPPLAVSDWAGLASRADAIVV 85
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG G +P+ + R+ RL K+ ++ SGG +E+
Sbjct: 86 LGAGRERGDPAWGGGDQPTATALERMRFAARLAKAS-----GLPVLTSGGLHYGTPPSEA 140
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ +L E + E S T++NAQ ++ +++ + + ++LV+ A+H++RS+
Sbjct: 141 RLMAERLHE-DFAVEVKWREEASRTTWENAQLTAKVLQPLGFRRVVLVTQAWHMQRSRWS 199
Query: 192 FQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIAY 237
F+ G + +L + ++P S + + E +G++
Sbjct: 200 FEQAGFEVVPAPVGFLGRDHARPFGGLLPESRAMWQSGQLFNEVVGLVGYR 250
>gi|255524874|ref|ZP_05391823.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|255511444|gb|EET87735.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
Length = 327
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 30/239 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M+L I I + S+++ F +L F ++L+ L ++
Sbjct: 99 MILGSILTIAGIYFFQDTSVKRTLFSLVLILEFYIA--FTFASLLIYSLIYTCL------ 150
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + + I++ G G I R+ P + R+ + + +Y C+QH+ I++SG
Sbjct: 151 PKRLNCDYIIVHGCGL-----IGGERVSPLLKG--RVDKAVHIYHKCRQHT---KIVVSG 200
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILV 179
G ++E+ N L+E+G DDI LE QS TF+N + M+ K I V
Sbjct: 201 GKGDDEKISEAAAMKNYLVETGFPEDDIILEEQSKTTFENLKNVKDMLDVNGVKHRYIFV 260
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ YH+ R+ LY + + +A +Y ++EYI I+ Y
Sbjct: 261 TNNYHVFRTSLYAKKLKMKASGVGCG-----------TAAYYWPSAFIREYIAIMFRYK 308
>gi|167623456|ref|YP_001673750.1| hypothetical protein Shal_1525 [Shewanella halifaxensis HAW-EB4]
gi|167353478|gb|ABZ76091.1| protein of unknown function DUF218 [Shewanella halifaxensis
HAW-EB4]
Length = 253
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 51/243 (20%), Positives = 109/243 (44%), Gaps = 17/243 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK---IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
M + + L+++ +L+ ++ R + ++ +L+ WG LL L+ Y
Sbjct: 13 MPIPMVLLLIALAYLVMRNRRSSKALLVIAAALLIILSSSWG--SNWLLAPLEDQYS--- 67
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
++ Q G ++++LG+G +PA++ + S + +R+ E +R C ++
Sbjct: 68 VNNQPMGKGCLVMVLGSGHDENANLPAVQ-QLSHTALARLTEGVR----QLSLGKSCKLV 122
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SG + + + + +E GV I DT + AQF + + +
Sbjct: 123 VSGWSGGLSSRSHADMMFDAAVELGVSAQSIIKFPLPKDTIEEAQFMEWEVADAPFR--- 179
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDY-LNAYYSIIPLSANFYLTELALKEYIGILIA 236
LV+SA H+ R+ F + +N A+ +D+ A Y + + ++ A+ EY+G+L
Sbjct: 180 LVTSASHMPRAMAIFSNAKLNAIAAPTDFAQRASYWWRFDAQSLLNSQRAIHEYMGLLWF 239
Query: 237 YYR 239
+
Sbjct: 240 KLK 242
>gi|306841899|ref|ZP_07474579.1| Hypothetical protein BIBO2_1680 [Brucella sp. BO2]
gi|306288029|gb|EFM59431.1| Hypothetical protein BIBO2_1680 [Brucella sp. BO2]
Length = 205
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
+LL L+ + + PQ + IV+LG G + + + RI ETMRL
Sbjct: 1 MLLSPLENRFPKSESLPQ---HVDGIVVLG-GYMNGEIVAGRQNFELNSAADRIVETMRL 56
Query: 104 YKSCKQHSMHCTIIISGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
+ II+SGG+ + E+ L + G D E +S +T +NA
Sbjct: 57 ARLY----PDAKIIVSGGEGTFFEKSAREAETTRALLSDLGFSGDRYIFEGKSRNTVENA 112
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS---- 217
FS ++ G+ +LV+SAYH+ R+ F+ G + A DY L
Sbjct: 113 IFSQALALPKPGETWLLVTSAYHMPRAVGCFRKAGFDVTAWPVDYKTRTRETFGLYLESP 172
Query: 218 -ANFYLTELALKEYIGILIAYYRGN 241
+AL+E+ G+ ++ G
Sbjct: 173 NDALSRFSMALREWTGLAAYWWTGR 197
>gi|167035834|ref|YP_001671065.1| hypothetical protein PputGB1_4845 [Pseudomonas putida GB-1]
gi|166862322|gb|ABZ00730.1| protein of unknown function DUF218 [Pseudomonas putida GB-1]
Length = 253
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 43/231 (18%), Positives = 96/231 (41%), Gaps = 19/231 (8%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTIL---LKHLQFSYQRPLLSPQWKK---DGNIIVL 71
++ R + CF + + +P ++ + L+ + PL+ W + IV+
Sbjct: 28 RTRRPRLAVLCFAVGLGGLWLMSLPLVVQETARQLET--EPPLVVDDWAGLASRADAIVV 85
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG G +P+ + R+ RL K+ ++ SGG +E+
Sbjct: 86 LGAGRERGDPAWGGSDQPTATALERMRFAARLAKAS-----GLPVLTSGGLHYGTPPSEA 140
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ ++L E E S T++NAQ ++ +++ + + ++LV+ A+H++RS+
Sbjct: 141 RLMADRLQEDFAVAVK-WREEASRTTWENAQLTAKVLQPLGIRRVVLVTQAWHMQRSRWS 199
Query: 192 FQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIAY 237
F+ G + +L + ++P S + + E +G++
Sbjct: 200 FEQAGFEVVPAPVGFLGRDHARPFAGLLPESRAMWQSGQLFNEVVGLVGYR 250
>gi|90419579|ref|ZP_01227489.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336516|gb|EAS50257.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 263
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 48/248 (19%), Positives = 98/248 (39%), Gaps = 18/248 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LL I +++ W + +F ++ L + + ++ L+ + RP L P
Sbjct: 19 ILLVAILGLLAGWLGRPRIAAGLFVLATATLAVCSL--TPLGLVMTAVLEDRFPRPDLPP 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG E + + R+ M L + + ++ SG
Sbjct: 77 AI----DGIIVLGGAFDTRVARTRGMNELN-DAADRVTAGMELAQRYPK----AKLLFSG 127
Query: 121 GDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G + + E+ G+ D + L+ ++ DTF+NA F+ + + G+ +L
Sbjct: 128 GVAALLEEDIPETEAAEALYRGLGLAPDRLLLDGRARDTFENAVFAKELAQPKPGEVWVL 187
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGI 233
V+SA H+ R+ F+ G + DY + + N A++EY+G+
Sbjct: 188 VTSASHMPRAVGCFRVAGFDIVPYPVDYRTPSGPALWRPSSTTTRNLEKVHFAIREYLGL 247
Query: 234 LIAYYRGN 241
+ G
Sbjct: 248 VAYRLSGR 255
>gi|298527828|ref|ZP_07015232.1| protein of unknown function DUF218 [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511480|gb|EFI35382.1| protein of unknown function DUF218 [Desulfonatronospira
thiodismutans ASO3-1]
Length = 256
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 55/245 (22%), Positives = 105/245 (42%), Gaps = 22/245 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LL IF+I ++ F+ + I + +L+ L+ YQ
Sbjct: 25 ILLGLIFII------FKRNRTGFVFILAGTVFLGAISVEPVADRMLRPLEQKYQPLQYDD 78
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
IV+LG+G + +P + S S SR+ E +R+ K T++ +G
Sbjct: 79 TSAPS--YIVVLGSGHFLQEGLPPNAL-LSQSSLSRVVEGIRI----KNMYPDSTLVFTG 131
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++ +A S + +E G++ +DI + ++ DT A + ++ ++ +LV+
Sbjct: 132 GR-FRYPVASSELAALASVELGIDENDILVVAEAKDTEDEASLARDIV---GDESFVLVT 187
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILI 235
SA H+ RS + F+ G++ S +D+ + P + TE E +G+
Sbjct: 188 SASHMHRSMIIFKSEGMDPIPSPTDFRAPDKLYNLWDYFPSAGALAKTERVFYERLGLAW 247
Query: 236 AYYRG 240
A RG
Sbjct: 248 AMIRG 252
>gi|289625792|ref|ZP_06458746.1| hypothetical protein PsyrpaN_11816 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289648423|ref|ZP_06479766.1| hypothetical protein Psyrpa2_11824 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330867188|gb|EGH01897.1| hypothetical protein PSYAE_08002 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330871076|gb|EGH05785.1| hypothetical protein PSYAE_28243 [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 256
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 92/240 (38%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQ 61
+ ++ LI+ +W + F + + + + + ++ P
Sbjct: 16 VLFVLLILGWWLRRSRPRLATAFFAFGLGGLWLMSLPVAVEFAARKIEQVPPLPQQQWAT 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL + I+ +GG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTWGT-DTPTGLGLERLRLAARL-----SKTSGLPILTTGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L E S T++NA ++++++ + K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQSL-HDDFGVTARWQEGLSRTTWENATMTAAVLQQLGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H++R++ F+ G ++ +L + +P S F + + L E G+L+
Sbjct: 189 AWHMQRARWSFEKAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|150020778|ref|YP_001306132.1| hypothetical protein Tmel_0886 [Thermosipho melanesiensis BI429]
gi|149793299|gb|ABR30747.1| protein of unknown function DUF218 [Thermosipho melanesiensis
BI429]
Length = 236
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 26/238 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L +F I+S + L+ + FF+ + L+ I + L +P+
Sbjct: 17 ILILLFFIISIYFLIKKRHIWRFFIILSITLYVI--STPIFNFFISKLFIVDTKPI---- 70
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
IV+LG G A IE + R+ + +YK + I+++GG
Sbjct: 71 --PKDGTIVVLGGGIVNY----ANNIEIGTHTLKRLLKGWEIYKEKR-----LKIVVAGG 119
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
G+ E+ V + L++ GV +DDI E S T +NA+ S + K+ NIILV+S
Sbjct: 120 -VIGDGIREADVMKDFLIKLGVSKDDIITENTSRTTKENAKNVSKITKD---PNIILVTS 175
Query: 182 AYHLKRSQLYFQHFGI-NTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGIL 234
H+KR+++ F+ + N DY + +P Y L E++GIL
Sbjct: 176 FLHMKRAKMLFEKYTQSNIIPVVCDYPIDLRKNFLDFLPSPRGIYTFSLITHEFLGIL 233
>gi|331011324|gb|EGH91380.1| hypothetical protein PSYTB_16950 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 256
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 42/240 (17%), Positives = 93/240 (38%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQ 61
+ ++ LI+ +W + F + + + + + ++ P
Sbjct: 16 VLFVLLILGWWLRRSRPRLATAFFAVGLGGLWLMSLPVAVEFAARKIEQVPPLPQQQWAT 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K + I+ +GG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTWGT-DTPTGLGLERLRLAARLSK-----TSGLPILTTGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L E S T++NA ++++++ + K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQSL-HDDFGVTARWQEGLSRTTWENATMTAAVLQPLGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H++R++ F+ G ++ +L + +P S F + + L E G+L+
Sbjct: 189 AWHMQRARWSFEKAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|327398427|ref|YP_004339296.1| hypothetical protein Hipma_0260 [Hippea maritima DSM 10411]
gi|327181056|gb|AEA33237.1| protein of unknown function DUF218 [Hippea maritima DSM 10411]
Length = 258
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 25/239 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
LI+ L + R F +S F+L F I +LL +L+ +
Sbjct: 31 LILITASFLVKRFRWFFMVSAFVLWF--ISTTPGKNLLLSYLED-------IKTSSDTAS 81
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+V+L G+ P RI+ +++ R+ + L K + +I SGG + +
Sbjct: 82 AVVVLSGGSN-----PYDRIKTYPEAFKRLMYGILLAKRY-----NIPLIFSGGGLKYND 131
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVSSAYHLK 186
A++ + + + I E +SL+T+QNA+++S + M+ K I +V+SAYH K
Sbjct: 132 SAQAKNDIEIIAKICNCKIKIYFENKSLNTYQNAKYTSKFFEKMKIKKDIFIVTSAYHQK 191
Query: 187 RSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ + F++FG + ++ ++ +P NFY + A+ EYIGI Y RG
Sbjct: 192 RANILFRYFGFRVHSRPVNFFKERGSYVFWDFLPQMGNFYKSYKAIHEYIGIFSLYLRG 250
>gi|71737332|ref|YP_276508.1| hypothetical protein PSPPH_4392 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557885|gb|AAZ37096.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320322689|gb|EFW78782.1| hypothetical protein PsgB076_22227 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320330526|gb|EFW86505.1| hypothetical protein PsgRace4_08395 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 256
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 42/240 (17%), Positives = 93/240 (38%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQ 61
+ ++ LI+ +W + F + + + + + ++ P
Sbjct: 16 VLFVLLILGWWLRRSRPRLATAFFAFGLGGLWLMSLPVAVEFAARKIEQVPPLPQQQWAT 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K + I+ +GG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTWGT-DTPTGLGLERLRLAARLSK-----TSGLPILTTGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L E S T++NA ++++++ + K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQSL-HDDFGVTARWQEGLSRTTWENATMTAAVLQPLGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H++R++ F+ G ++ +L + +P S F + + L E G+L+
Sbjct: 189 AWHMQRARWSFEKAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|148549869|ref|YP_001269971.1| hypothetical protein Pput_4667 [Pseudomonas putida F1]
gi|148513927|gb|ABQ80787.1| protein of unknown function DUF218 [Pseudomonas putida F1]
Length = 253
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 43/248 (17%), Positives = 99/248 (39%), Gaps = 19/248 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL---LKHLQFSYQRPL 57
++ + ++ ++ R CF + + +P ++ + L+ + PL
Sbjct: 11 LMPPGVLFLLLLAAWWLRTRRPRLAALCFSVGLGGLWLMSLPLVVQETARVLES--EPPL 68
Query: 58 LSPQWKK---DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
W + IV+LG G +P+ + R+ RL K+
Sbjct: 69 AVSDWAGLANRADAIVVLGAGRERGDPAWGGSDQPTATALERMRFAARLAKAS-----GL 123
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
++ SGG +E+ + +L E + E S T++NAQ ++ +++ + +
Sbjct: 124 PVLTSGGLHYGTPPSEARLMAERLHE-DFAVEVKWREEASRTTWENAQLTAKVLQPLGFR 182
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKE 229
++LV+ A+H++RS+ F+ G + +L + ++P S + + E
Sbjct: 183 RVVLVTQAWHMQRSRWSFEMAGFEVVPAPVGFLGRDHARPFGGLLPESRAMWQSGQLFNE 242
Query: 230 YIGILIAY 237
+G++
Sbjct: 243 VVGLVGYR 250
>gi|77461176|ref|YP_350683.1| hypothetical protein Pfl01_4955 [Pseudomonas fluorescens Pf0-1]
gi|77385179|gb|ABA76692.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 259
Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 47/235 (20%), Positives = 91/235 (38%), Gaps = 18/235 (7%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ----WKKDGNIIVLLG 73
+ R CF L F +P ++ + + P L+ + + IV+LG
Sbjct: 28 RRSRPRLAGLCFALGFGGFWLMSLPVVVQWGAKALEREPPLARDSWASLAQRADAIVVLG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+G + +P+ R RL K+ I+ SGG E+ +
Sbjct: 88 SGRERGD-LAWGEDQPTGVGLERQRYAARLAKAS-----GLPILTSGGLHYGTPPTEAKL 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ L + E +S T++NA+FS+ ++ K I+LV+ A+H+ R+ +Q
Sbjct: 142 MADSLRD-DFGVTVRWQEGESRTTWENAEFSAKVLLPEGVKRIVLVTQAWHMPRAVWSYQ 200
Query: 194 HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA--YYRGN 241
G + +L + +P + + + + E +G + +YRG
Sbjct: 201 QAGFEVVPAPVGFLGTDNARPFGGWLPEFKSIWQSGQLMNEAVGQIGYSLFYRGG 255
>gi|294623043|ref|ZP_06701932.1| integral membrane protein [Enterococcus faecium U0317]
gi|291597599|gb|EFF28761.1| integral membrane protein [Enterococcus faecium U0317]
Length = 399
Score = 148 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 177 LPQWINALFFCVPLILIYLFI---VFYNFLTISFLYQFNRP------RYNQDFIVVLGAG 227
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVY 134
T+ S RI + + Y++ + +++ I++ SGG + E+I
Sbjct: 228 LINGETV-------SPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPEAIAM 280
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N +S ++ I S+ YH+ R+ LY
Sbjct: 281 KQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 340
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + +A +YL L+EYI IL+ +
Sbjct: 341 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAILMMNKK 376
>gi|116492028|ref|YP_803763.1| hypothetical protein PEPE_0220 [Pediococcus pentosaceus ATCC 25745]
gi|116102178|gb|ABJ67321.1| hypothetical protein PEPE_0220 [Pediococcus pentosaceus ATCC 25745]
Length = 339
Score = 148 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 54/242 (22%), Positives = 106/242 (43%), Gaps = 32/242 (13%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGI-IPTILLKHLQFSYQRPLLSPQ 61
L+++F++V+ +L + F +L + +G + + I + +L +S+ ++
Sbjct: 105 LNFLFMLVAGLAILFLNQ---FLGRFVGILLTLLGIDVTLTFIFVCYLFYSFLYQVV--P 159
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + + I++LG G P ++ R+ + + Y+ + I++SGG
Sbjct: 160 IKGNVDYIIVLGAGVRSETVTPLLK--------GRLDKALEYYRRQ---NGAVKIVVSGG 208
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM----QGKNII 177
++E+ L V D I LE QS TF+N QFS I+ Q II
Sbjct: 209 QGPDEPVSEAFAMAKYLRNQSVPEDKIILEDQSTTTFENMQFSKQKIEADWQGTQPPQII 268
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ YH+ R +Y + G+N S ++ ++L ++EYI +L+ Y
Sbjct: 269 FATNNYHVLRGVIYARKAGLNANGVGSP-----------TSFYFLPSALIREYIALLVIY 317
Query: 238 YR 239
+
Sbjct: 318 KK 319
>gi|294620208|ref|ZP_06699542.1| integral membrane protein [Enterococcus faecium E1679]
gi|314940170|ref|ZP_07847348.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133a04]
gi|314942413|ref|ZP_07849256.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133C]
gi|314952311|ref|ZP_07855322.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133A]
gi|314994246|ref|ZP_07859549.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133B]
gi|314997161|ref|ZP_07862147.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133a01]
gi|291593561|gb|EFF25101.1| integral membrane protein [Enterococcus faecium E1679]
gi|313588735|gb|EFR67580.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133a01]
gi|313591333|gb|EFR70178.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133B]
gi|313595570|gb|EFR74415.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133A]
gi|313598813|gb|EFR77658.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133C]
gi|313640609|gb|EFS05189.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0133a04]
Length = 399
Score = 148 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 177 LPQWINALFFCVPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 227
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVY 134
T+ S RI + + Y++ + +++ I++ SGG + E+I
Sbjct: 228 LINGETV-------SPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPEAIAM 280
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N +S ++ I S+ YH+ R+ LY
Sbjct: 281 KQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 340
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + +A +YL L+EYI IL+ +
Sbjct: 341 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAILMMNKK 376
>gi|251778604|ref|ZP_04821524.1| integral membrane protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243082919|gb|EES48809.1| integral membrane protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 357
Score = 148 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 27/201 (13%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L+ + + RP L + + I++LG+G P + SRI +
Sbjct: 155 VVNFLMSSIIYQLNRPKL------NQDFIIVLGSGLIGDRVPPLLG--------SRIEKA 200
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
++ Y Q + II SGG ++E+ + G+ +D LE S+ T +N
Sbjct: 201 IKFYNKQSQVTNPPKIIFSGGQGPDEKVSEAFTMQKYAVNKGIPIEDTILEDNSVSTLEN 260
Query: 161 AQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
+FS S+++N+ +G I ++ YHL R+ +Y + GI ++ S +A
Sbjct: 261 MKFSKSIMENLMPEGYRSIFTTNNYHLFRAGIYARIAGIKSQGIGS-----------KTA 309
Query: 219 NFYLTELALKEYIGILIAYYR 239
++L ++EYI I++ Y +
Sbjct: 310 LYFLPNAMIREYIAIVVMYKK 330
>gi|187776701|ref|ZP_02993174.1| hypothetical protein CLOSPO_00216 [Clostridium sporogenes ATCC
15579]
gi|187775360|gb|EDU39162.1| hypothetical protein CLOSPO_00216 [Clostridium sporogenes ATCC
15579]
Length = 324
Score = 148 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 99/239 (41%), Gaps = 30/239 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M+L I I + S+ + F +L F T+L+ L ++
Sbjct: 96 MILGSILTIAGMYFFQDASVMRTLFSLVLILEFYIT--FTFSTLLIYSLIYTCL------ 147
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++ G G I R+ P + R+ + +R+Y C+QH I++SG
Sbjct: 148 PKRLNCAYIIVHGCGL-----IGGERVSPLLKG--RVDKAVRIYHKCRQH---PKIVVSG 197
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILV 179
G ++E+ N L+E+G +DI LE QS TF+N + M+ K I V
Sbjct: 198 GKGDDEKISEAAAMKNYLVETGFPEEDIILEEQSKTTFENLKNVRDMLDVNGVKHRYIFV 257
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ YH+ R+ LY + I +A +Y ++EYI I+ Y
Sbjct: 258 TNNYHVFRTSLYAKKLKIKASGVGCG-----------TAAYYWPSAFIREYIAIMFRYK 305
>gi|238792388|ref|ZP_04636022.1| hypothetical protein yinte0001_13160 [Yersinia intermedia ATCC
29909]
gi|238728314|gb|EEQ19834.1| hypothetical protein yinte0001_13160 [Yersinia intermedia ATCC
29909]
Length = 255
Score = 148 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 92/241 (38%), Gaps = 20/241 (8%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
++ W Q K F +++L I + LL L+ Y Q
Sbjct: 25 LALILLWFTRWQKSGKTLFALSWLVLL-LISLQPVADRLLLPLEKPYATY----QGNDPV 79
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G T P A S R+ E +RLY++ M T G +
Sbjct: 80 DYIVVLGGGYTFNPN-WAPSANLFANSLPRVTEGVRLYRAHPSAKMVFT-----GSAGPN 133
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ + GV DI Q DT + A ++++ K +LV+SA HL
Sbjct: 134 KQSSAATAAQVAESLGVPVADIIALEQPKDTVEEAAAVAALV---GDKPFLLVTSANHLP 190
Query: 187 RSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ +F G++ + ++ L ++ IP +A E A E +G+L G
Sbjct: 191 RAIKFFTAIGLHPIPAPANQLAITTPLHSWERAIPAAAWLGHAERAWYETLGLLWQKLSG 250
Query: 241 N 241
+
Sbjct: 251 D 251
>gi|331014754|gb|EGH94810.1| hypothetical protein PLA106_02555 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 256
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 18/235 (7%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK----KDGNIIVLLG 73
+ R +CF + +P ++ + Q P L Q + + + IV+LG
Sbjct: 28 RRSRPRLATACFAAGLGGLWLMSVPAVVEFAARKMEQIPPLPQQQRATLAQQADAIVVLG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
NG P+ R+ RL K I+ +GG +E+ +
Sbjct: 88 NGRERNSPTWGA-DTPTGLGLERLRLAARLAK-----ESGLPILTAGGLHFDQPPSEASI 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L + E S T++NA ++++++ K ++LV+ A+H+ R++ F+
Sbjct: 142 MAQAL-QQDFGVTVRWQEGLSRTTWENATMTAAVLQPQGIKRVVLVTQAWHMPRARWSFE 200
Query: 194 HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA--YYRGN 241
G ++ +L + +P S F + + L E G+L+ YRG
Sbjct: 201 QAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVYPWIYRGG 255
>gi|260558934|ref|ZP_05831121.1| conserved hypothetical protein [Enterococcus faecium C68]
gi|260075042|gb|EEW63357.1| conserved hypothetical protein [Enterococcus faecium C68]
Length = 350
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 128 LPQWINALFFCIPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 178
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVY 134
T+ S RI + + Y + + +++ I++ SGG + E++
Sbjct: 179 LINGETV-------SPLLAKRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPEAMAM 231
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N ++S ++ I S+ YH+ R+ LY
Sbjct: 232 KQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 291
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + +A +YL L+EYI IL+ +
Sbjct: 292 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAILMMNKK 327
>gi|188590697|ref|YP_001920933.1| integral membrane protein [Clostridium botulinum E3 str. Alaska
E43]
gi|188500978|gb|ACD54114.1| integral membrane protein [Clostridium botulinum E3 str. Alaska
E43]
Length = 357
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 27/201 (13%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L+ + + RP L + + I++LG+G P + SRI +
Sbjct: 155 VVNFLMSSIIYQLNRPKL------NQDFIIVLGSGLIGDRVPPLL--------ASRIDKA 200
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
+ Y Q + II SGG ++E+ + G+ +D +E S+ T +N
Sbjct: 201 IEFYNKQSQVTNPPKIIFSGGQGPDEKVSEAFAMQKYAVNKGITIEDTIIEDNSVSTLEN 260
Query: 161 AQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
+FS ++++N+ +G I ++ YHL R+ +Y + GI ++ S +A
Sbjct: 261 MKFSKNIMENLMPEGYRSIFTTNNYHLFRAGIYARLAGIKSQGVGS-----------KTA 309
Query: 219 NFYLTELALKEYIGILIAYYR 239
++L ++EYI I++ Y +
Sbjct: 310 LYFLPNAMIREYIAIVVMYKK 330
>gi|227551940|ref|ZP_03981989.1| integral membrane protein [Enterococcus faecium TX1330]
gi|293378333|ref|ZP_06624502.1| putative membrane protein [Enterococcus faecium PC4.1]
gi|293571655|ref|ZP_06682676.1| integral membrane protein [Enterococcus faecium E980]
gi|227178941|gb|EEI59913.1| integral membrane protein [Enterococcus faecium TX1330]
gi|291608325|gb|EFF37626.1| integral membrane protein [Enterococcus faecium E980]
gi|292643197|gb|EFF61338.1| putative membrane protein [Enterococcus faecium PC4.1]
Length = 399
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 177 LPQWINALFFCIPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 227
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVY 134
T+ S RI + + Y + + +++ I++ SGG + E+I
Sbjct: 228 LINGETV-------SPLLAKRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPEAIAM 280
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N ++S ++ I S+ YH+ R+ LY
Sbjct: 281 KQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 340
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + +A +YL L+EYI IL+ +
Sbjct: 341 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAILMMNKK 376
>gi|257884113|ref|ZP_05663766.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
gi|257819951|gb|EEV47099.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
Length = 368
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 146 LPQWINALFFCVPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 196
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVY 134
T+ S RI + + Y++ + +++ I++ SGG + E+I
Sbjct: 197 LINGETV-------SPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPEAIAM 249
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N +S ++ I S+ YH+ R+ LY
Sbjct: 250 KQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 309
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + +A +YL L+EYI IL+ +
Sbjct: 310 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAILMMNKK 345
>gi|224502681|ref|ZP_03670988.1| hypothetical protein LmonFR_09199 [Listeria monocytogenes FSL
R2-561]
gi|254832250|ref|ZP_05236905.1| hypothetical protein Lmon1_12929 [Listeria monocytogenes 10403S]
Length = 312
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 108/239 (45%), Gaps = 25/239 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L + LI++++ + ++ I + + + + +G+ + F YQ
Sbjct: 73 LGILALIITWFGSILKTGSPILGIVV-VFIVALVGYFSFLFLSFLLSTFLYQFNF----P 127
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGG 121
+ + + +++LG+G +P + SR+ ++ Y K + T I+SGG
Sbjct: 128 RYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIKFYDKQYAKKGKRATFIVSGG 180
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVS 180
++E+ L+E G++ + I +E QS++T QN +FS + + M N + +
Sbjct: 181 QGANETISEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFST 240
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y +
Sbjct: 241 NNFHLFRAGIYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMYKK 288
>gi|293559773|ref|ZP_06676293.1| integral membrane protein [Enterococcus faecium E1162]
gi|314950188|ref|ZP_07853473.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0082]
gi|291606256|gb|EFF35670.1| integral membrane protein [Enterococcus faecium E1162]
gi|313643498|gb|EFS08078.1| integral membrane protein with DUF218 domain protein [Enterococcus
faecium TX0082]
Length = 399
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 177 LPQWINALFFCIPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 227
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVY 134
T+ S RI + + Y + + +++ I++ SGG + E++
Sbjct: 228 LINGETV-------SPLLAKRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPEAMAM 280
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N ++S ++ I S+ YH+ R+ LY
Sbjct: 281 KQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 340
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + +A +YL L+EYI IL+ +
Sbjct: 341 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAILMMNKK 376
>gi|293553828|ref|ZP_06674443.1| integral membrane protein [Enterococcus faecium E1039]
gi|291602034|gb|EFF32271.1| integral membrane protein [Enterococcus faecium E1039]
Length = 399
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 177 LPQWINALFFCVPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 227
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVY 134
T+ S RI + + Y++ + +++ I++ SGG L E+I
Sbjct: 228 LINGETV-------SPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKLPEAIAM 280
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N +S ++ I S+ YH+ R+ LY
Sbjct: 281 KQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 340
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + +A +YL L+EYI IL+ +
Sbjct: 341 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAILMMNKK 376
>gi|69249391|ref|ZP_00604956.1| Protein of unknown function DUF218 [Enterococcus faecium DO]
gi|258614355|ref|ZP_05712125.1| hypothetical protein EfaeD_01478 [Enterococcus faecium DO]
gi|68194178|gb|EAN08708.1| Protein of unknown function DUF218 [Enterococcus faecium DO]
Length = 399
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 177 LPQWINALFFCVPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 227
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVY 134
T+ S RI + + Y++ + +++ I++ SGG + E+I
Sbjct: 228 LINGETV-------SPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPEAIAM 280
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N +S ++ I S+ YH+ R+ LY
Sbjct: 281 KQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 340
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + +A +YL L+EY+ IL+ +
Sbjct: 341 RQAKLKANGIGA-----------KTAFYYLPNAFLREYLAILMMNKK 376
>gi|261209456|ref|ZP_05923819.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|289567586|ref|ZP_06447918.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
gi|260076584|gb|EEW64348.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|289160620|gb|EFD08588.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
Length = 349
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 127 LPQWINALFFCVPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 177
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVY 134
T+ S RI + + Y++ + +++ I++ SGG + E+I
Sbjct: 178 LINGETV-------SPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPEAIAM 230
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N +S ++ I S+ YH+ R+ LY
Sbjct: 231 KQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 290
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + +A +YL L+EY+ IL+ +
Sbjct: 291 RQAKLKANGIGA-----------KTAFYYLPNAFLREYLAILMMNKK 326
>gi|78484758|ref|YP_390683.1| hypothetical protein Tcr_0413 [Thiomicrospira crunogena XCL-2]
gi|78363044|gb|ABB41009.1| Conserved hypothetical protein; predicted membrane protein with
DUF218 [Thiomicrospira crunogena XCL-2]
Length = 272
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 49/228 (21%), Positives = 98/228 (42%), Gaps = 17/228 (7%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
K F + + F + + I +L++ L+ ++ P P K + I++LG G +
Sbjct: 41 AKTFLLPASLAGFIVLAF-PIGDLLIQPLEQRFKAPDTLP---KHIDGIIVLGGGEDLKR 96
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ---KHGLAESIVYNNK 137
++ R E R L H +I +GG ++ E +
Sbjct: 97 SLSWGRPELGI-GGDRYIGAKELA----THYPKAPVIFTGGSGSMQLQNTQGEGSLARQL 151
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L G+ + +E+ S +T++N +F+ +++ + G +LV+SA+H+ RS + I
Sbjct: 152 LTTLGITDKRLIIESLSRNTYENFKFTKALLPDANG-TYLLVTSAFHMPRSVGIANNQNI 210
Query: 198 NTKASCSDYLNAYYSIIPLSANFYL----TELALKEYIGILIAYYRGN 241
+ DY + + + +F+ E A KE+IG+ + Y+ G
Sbjct: 211 HVIPYPVDYRSNSEKLRQIDFDFFDHLKSLEPAWKEWIGLTVYYWTGK 258
>gi|296387487|ref|ZP_06876962.1| hypothetical protein PaerPAb_05012 [Pseudomonas aeruginosa PAb1]
Length = 222
Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats.
Identities = 42/218 (19%), Positives = 84/218 (38%), Gaps = 13/218 (5%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIVLLGNGTTIIPTIPAI 85
C + + + + L+ P + + IV+LG G
Sbjct: 9 VCGFFGLWLMSMPLSVEWMGRWLESEPALLAEDLPGLAQRADAIVILGAGRQTNDPAWGD 68
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
PS + R+ RL K + ++ISGG +E+ + N LL+
Sbjct: 69 -DAPSLLAAERLRYAARLAK-----TSALPVLISGGLHYGRPPSEAALMANALLQDFGVP 122
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S T++NA S+ ++ + ++LV+ A+H++R++ F+ G +
Sbjct: 123 TR-WQEGLSRTTWENATLSAPQLREAGVRRVVLVTQAWHMQRARWSFERQGFEVIPAPVG 181
Query: 206 Y-----LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ L + +P + F+ + + L E IG++
Sbjct: 182 FLGGANLRPFGGWLPEAQAFWQSGMLLNEAIGLVGYRL 219
>gi|270261203|ref|ZP_06189476.1| putative membrane protein [Serratia odorifera 4Rx13]
gi|270044687|gb|EFA17778.1| putative membrane protein [Serratia odorifera 4Rx13]
Length = 257
Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 19/208 (9%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
+ LL+ ++ Y + N IV+LG G T P A S R+
Sbjct: 56 QPVADRLLRPIESEYVTY----RGNDQVNYIVVLGGGYTFNPD-WAPSSNLIGNSLPRVT 110
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
E +RLY + M T G + L+ + GV R D+ L + +DT
Sbjct: 111 EGVRLYLAHPGSKMVFT-----GAGGANTLSNAATAARVAESLGVPRSDMVLLDRPMDTE 165
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYS 212
Q A S ++ + ILV+SA HL R+ +F+ G++ + ++ LN +
Sbjct: 166 QEALQVSKLVGQ---QPFILVTSANHLPRAMRFFEAKGLHPIPAPANQLAISSRLNIWDR 222
Query: 213 IIPLSANFYLTELALKEYIGILIAYYRG 240
++P + +E A E +G L +G
Sbjct: 223 VVPSAMFLGHSERAWYETLGSLWQSLKG 250
>gi|257898082|ref|ZP_05677735.1| conserved hypothetical protein [Enterococcus faecium Com15]
gi|257835994|gb|EEV61068.1| conserved hypothetical protein [Enterococcus faecium Com15]
Length = 368
Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 146 LPQWINALFFCIPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 196
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVY 134
T+ S RI + + Y + + +++ I++ SGG + E++
Sbjct: 197 LINGETV-------SPLLAKRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPEAMAM 249
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N ++S ++ I S+ YH+ R+ LY
Sbjct: 250 KQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 309
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + +A +YL L+EYI IL+ +
Sbjct: 310 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAILMMNKK 345
>gi|257886897|ref|ZP_05666550.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
gi|257895468|ref|ZP_05675121.1| conserved hypothetical protein [Enterococcus faecium Com12]
gi|257822951|gb|EEV49883.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
gi|257832033|gb|EEV58454.1| conserved hypothetical protein [Enterococcus faecium Com12]
Length = 368
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 146 LPQWINALFFCIPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 196
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVY 134
T+ S RI + + Y + + +++ I++ SGG + E+I
Sbjct: 197 LINGETV-------SPLLAKRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPEAIAM 249
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N ++S ++ I S+ YH+ R+ LY
Sbjct: 250 KQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 309
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + +A +YL L+EYI IL+ +
Sbjct: 310 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAILMMNKK 345
>gi|300777919|ref|ZP_07087777.1| protein of hypothetical function DUF218 [Chryseobacterium gleum
ATCC 35910]
gi|300503429|gb|EFK34569.1| protein of hypothetical function DUF218 [Chryseobacterium gleum
ATCC 35910]
Length = 216
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSY-----------QRPLLSPQWKKDGNIIVLLG 73
+L+ FIG G + ++ +LQ SY Q P++ NI
Sbjct: 1 MGIFAVLMIIFIGNGFLGKLISGYLQKSYLNTSEIRNSGSQHPVIVVLGGGVVNI----- 55
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+ SYSR+ +LY + K ++ C I++SG K ++E+ +
Sbjct: 56 ----------DHTEKLHTMSYSRMVTAYQLYHAYKTNNQSCKILVSG--KGKGSMSEAEL 103
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ + GV DI E +S++T++NA++SS ++K M +I LV+S +H+KRS FQ
Sbjct: 104 FRENFKKMGVADADIIKEDKSMNTYENAKYSSRILKQMAPSSIDLVTSGFHMKRSVALFQ 163
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
FG++ + SD++ ++IP S N T + LKE +GI
Sbjct: 164 TFGLHPVPNASDFITTEITLIPNSYNAAFTFVMLKEVLGI 203
>gi|293568622|ref|ZP_06679937.1| integral membrane protein [Enterococcus faecium E1071]
gi|291588582|gb|EFF20415.1| integral membrane protein [Enterococcus faecium E1071]
Length = 399
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 177 LPQWINALFFCIPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 227
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVY 134
T+ S RI + + Y + + +++ I++ SGG + E+I
Sbjct: 228 LINGETV-------SPLLAKRINKAIAFYGAQSRATLNPPILLMSGGQGADEKVPEAIAM 280
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N ++S ++ I S+ YH+ R+ LY
Sbjct: 281 KQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 340
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + +A +YL L+EYI ILI +
Sbjct: 341 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAILIMNKK 376
>gi|257890483|ref|ZP_05670136.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
gi|257826843|gb|EEV53469.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
Length = 368
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 146 LPQWINALFFCIPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 196
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVY 134
T+ S RI + + Y + + +++ I++ SGG + E++
Sbjct: 197 LINGETV-------SPLLAKRINKAIAFYWAQSRATLNPPILLMSGGQGADEKVPEAMAM 249
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N ++S ++ I S+ YH+ R+ LY
Sbjct: 250 KQYAMEQGIPERDILVETNSTTTLENMRYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 309
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + +A +YL L+EYI IL+ +
Sbjct: 310 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAILMMNKK 345
>gi|157376071|ref|YP_001474671.1| hypothetical protein Ssed_2936 [Shewanella sediminis HAW-EB3]
gi|157318445|gb|ABV37543.1| protein of unknown function DUF218 [Shewanella sediminis HAW-EB3]
Length = 251
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 51/219 (23%), Positives = 101/219 (46%), Gaps = 12/219 (5%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+S ++L F+ L L+ YQ ++ D ++++LG+G + A
Sbjct: 38 ILSVAIVLLVFLSSTPGSNFLSSPLESQYQ---VNSAPIADACLVMVLGSGHDDSISGTA 94
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
I+ + S + +R+ E MR + + C ++ SG + + + V +E G+
Sbjct: 95 IQ-QLSSTALARLSEGMRQFNLGR----DCKLVFSGWNGGTGLHSHAEVMAAAAVELGIP 149
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
++ I + DT + AQF I N+ + LV+SA H+ RS F + G+ +A+ +
Sbjct: 150 KNRIITFPLAKDTIEEAQFMKWEIGNVPFR---LVTSASHMPRSMSTFANIGLTPQAAPT 206
Query: 205 DYLNAYYSIIPL-SANFYLTELALKEYIGILIAYYRGNR 242
D++ L + N + ++ A+ EY+G L + +R
Sbjct: 207 DFITREGYWWRLDAHNLWSSQRAIHEYVGKLWFQIKHHR 245
>gi|325276217|ref|ZP_08142016.1| hypothetical protein G1E_22290 [Pseudomonas sp. TJI-51]
gi|324098646|gb|EGB96693.1| hypothetical protein G1E_22290 [Pseudomonas sp. TJI-51]
Length = 253
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 43/224 (19%), Positives = 94/224 (41%), Gaps = 19/224 (8%)
Query: 25 FMSCFMLLFSFIGWGIIPTIL---LKHLQFSYQRPLLSPQWKK---DGNIIVLLGNGTTI 78
CF + + +P ++ + L+ + PL W + + IV+LG G
Sbjct: 35 AALCFGVGLGGLWLMSLPLVVQETARVLET--EPPLAVSDWARLASRADAIVVLGAGRER 92
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+P+ + R+ RL K+ ++ SGG +E+ + ++L
Sbjct: 93 GDPAWGGGDQPTATALERMRFAARLAKAS-----GLPVLTSGGLHYGTPPSEAQLMADRL 147
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
E + E S T++NAQ S+ +++ + + +++V+ A+H++RS+ F+ G
Sbjct: 148 RE-DFAVEVRWREEASRTTWENAQLSAKVLQPLGIRRVVVVTQAWHMQRSRWSFEQAGFE 206
Query: 199 TKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ +L + ++P S + + L E +G++
Sbjct: 207 VVPAPVGFLGREHARPFGGLLPESRAMWQSGQLLNEVVGLVGYR 250
>gi|229016285|ref|ZP_04173233.1| hypothetical protein bcere0030_8630 [Bacillus cereus AH1273]
gi|229022523|ref|ZP_04179055.1| hypothetical protein bcere0029_8750 [Bacillus cereus AH1272]
gi|228738776|gb|EEL89240.1| hypothetical protein bcere0029_8750 [Bacillus cereus AH1272]
gi|228745056|gb|EEL95110.1| hypothetical protein bcere0030_8630 [Bacillus cereus AH1273]
Length = 332
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 51/241 (21%), Positives = 104/241 (43%), Gaps = 30/241 (12%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ I L++ + +++++ +L F I + +L ++ + +
Sbjct: 106 VFGIIGLLMKLAFSVYHPSFYMYYVTVVLLFLYF------AYIFMSYLTYAVLYHFIKVK 159
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG+G +P + SR+ + M Y II+SGG
Sbjct: 160 YIP--DFIIVLGSGLIGGDRVPPL-------LASRLDKGMDEYIK---SGRIPKIIVSGG 207
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVS 180
++E+ L+E G+ D+ E +S +T QN FS ++ ++ + I V+
Sbjct: 208 QGPDELVSEAAAMKKYLVEKGMNEKDVLTEDKSRNTLQNMLFSKKIMDTIKTDHKSIFVT 267
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ YH+ R+ +Y + G+ + S+ +A +YL L+EYIGIL+ Y
Sbjct: 268 NNYHVFRASIYARLSGLKCEGVGSN-----------TARYYLPSAFLREYIGILVMYKWW 316
Query: 241 N 241
+
Sbjct: 317 H 317
>gi|255026242|ref|ZP_05298228.1| hypothetical protein LmonocytFSL_07670 [Listeria monocytogenes FSL
J2-003]
Length = 284
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 108/239 (45%), Gaps = 25/239 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L + LI++++ + ++ I + + + + +G+ + F YQ
Sbjct: 45 LGILALIITWFGSILKTGSPILGIVV-VFIVALVGYFSFLFLSFLLSTFLYQFNF----P 99
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGG 121
+ + + +++LG+G +P + SR+ ++ Y K + T I+SGG
Sbjct: 100 RYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIKFYDKQYAKKGKRATFIVSGG 152
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVS 180
++E+ L+E G++ + I +E QS++T QN +FS + + M N + +
Sbjct: 153 QGANETISEAEAMRGYLIEKGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFST 212
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y +
Sbjct: 213 NNFHLFRAGIYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMYKK 260
>gi|257879975|ref|ZP_05659628.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|257893086|ref|ZP_05672739.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
gi|257814203|gb|EEV42961.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|257829465|gb|EEV56072.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
Length = 368
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 146 LPQWINALFFCVPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 196
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVY 134
T+ S RI + + Y++ + +++ I++ SGG + E+I
Sbjct: 197 LINGETV-------SPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPEAIAM 249
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N +S ++ I S+ YH+ R+ LY
Sbjct: 250 KQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 309
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + +A +YL L+EY+ IL+ +
Sbjct: 310 RQAKLKANGIGA-----------KTAFYYLPNAFLREYLAILMMNKK 345
>gi|16803044|ref|NP_464529.1| hypothetical protein lmo1004 [Listeria monocytogenes EGD-e]
gi|47096336|ref|ZP_00233932.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
gi|224500750|ref|ZP_03669099.1| hypothetical protein LmonF1_14176 [Listeria monocytogenes Finland
1988]
gi|254898822|ref|ZP_05258746.1| hypothetical protein LmonJ_03375 [Listeria monocytogenes J0161]
gi|254911689|ref|ZP_05261701.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254936015|ref|ZP_05267712.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|284801336|ref|YP_003413201.1| hypothetical protein LM5578_1086 [Listeria monocytogenes 08-5578]
gi|284994478|ref|YP_003416246.1| hypothetical protein LM5923_1040 [Listeria monocytogenes 08-5923]
gi|16410406|emb|CAC99082.1| lmo1004 [Listeria monocytogenes EGD-e]
gi|47015294|gb|EAL06231.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
gi|258608603|gb|EEW21211.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|284056898|gb|ADB67839.1| hypothetical protein LM5578_1086 [Listeria monocytogenes 08-5578]
gi|284059945|gb|ADB70884.1| hypothetical protein LM5923_1040 [Listeria monocytogenes 08-5923]
gi|293589638|gb|EFF97972.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 344
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 108/239 (45%), Gaps = 25/239 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L + LI++++ + ++ I + + + + +G+ + F YQ
Sbjct: 105 LGILALIITWFGSILKTGSPILGIVV-VFIVALVGYFSFLFLSFLLSTFLYQFNF----P 159
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGG 121
+ + + +++LG+G +P + SR+ ++ Y K + T I+SGG
Sbjct: 160 RYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIKFYDKQYAKKGKRATFIVSGG 212
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVS 180
++E+ L+E G++ + I +E QS++T QN +FS + + M N + +
Sbjct: 213 QGANETISEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFST 272
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y +
Sbjct: 273 NNFHLFRAGIYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMYKK 320
>gi|294616357|ref|ZP_06696150.1| integral membrane protein [Enterococcus faecium E1636]
gi|291590871|gb|EFF22587.1| integral membrane protein [Enterococcus faecium E1636]
Length = 399
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 30/227 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 177 LPQWINALFFCVPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 227
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVY 134
T+ S RI + + Y++ + +++ I++ SGG + E+I
Sbjct: 228 LINGETV-------SPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPEAIAM 280
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYF 192
+ G+ DI +ET S T +N +S ++ I S+ YH+ R+ LY
Sbjct: 281 KQYAMGQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 340
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + +A +YL L+EYI IL+ +
Sbjct: 341 RQAKLKANGIGA-----------KTAFYYLPNAFLREYIAILMMNKK 376
>gi|330873571|gb|EGH07720.1| hypothetical protein PSYMP_04175 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 256
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 87/228 (38%), Gaps = 16/228 (7%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWK---KDGNIIVLLG 73
+ R +CF + +P ++ + PL QW + + IVLLG
Sbjct: 28 RRSRPRLATACFAAGLGGLWLMSLPVVVEFAARKMEQIPPLPQQQWATLAQQADAIVLLG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
NG P+ R+ RL K I+ +GG +E+ +
Sbjct: 88 NGRERNSPTWGA-DTPTGLGLERLRLAARLAK-----ESGLPILTTGGLHFDQPPSEASI 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L + E S T++NA ++++++ K ++LV+ A+H+ R++ F+
Sbjct: 142 MAQAL-QQDFGVTVRWQEGLSRTTWENATMTAAVLEPQGIKRVVLVTQAWHMPRARWSFE 200
Query: 194 HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
G + +L + +P S F + + L E G+L+
Sbjct: 201 QAGFTVVGAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|220935848|ref|YP_002514747.1| hypothetical protein Tgr7_2685 [Thioalkalivibrio sp. HL-EbGR7]
gi|219997158|gb|ACL73760.1| conserved protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 251
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 52/245 (21%), Positives = 93/245 (37%), Gaps = 20/245 (8%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
S + IV + + K + L+ + LL L+ Y ++P
Sbjct: 13 SGLIAIVLGLLFWGRRLGKGLVFAGIAWLYV-AATPLFAGWLLAGLERGYP---VAPPLP 68
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ IV+L G S S R+ RL++ +++SGG
Sbjct: 69 EAAGAIVVLAGGRHPDAPEYGGETV-SPHSLERLRYGARLHRD-----TGLPLLVSGGRV 122
Query: 124 QK-HGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ AE+ + + L E GV ET+S +T +NA FS+ ++ ++ +LVS
Sbjct: 123 RGDEPAAEADLLADVLEGELGVAVR--WRETESRNTCENALFSAHLLAEAGIEHALLVSH 180
Query: 182 AYHLKRSQLYFQHFGINTKASCS------DYLNAYYSIIPLSANFYLTELALKEYIGILI 235
A H+ R+ FQ + + ++P +LT AL EY+G++
Sbjct: 181 ALHMPRAVWCFQRTELAVTPFPTLPMGDLSRHRGITVVLPQPRALWLTGQALHEYLGLVW 240
Query: 236 AYYRG 240
+
Sbjct: 241 YRVKW 245
>gi|330987615|gb|EGH85718.1| hypothetical protein PLA107_21508 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 256
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 42/240 (17%), Positives = 93/240 (38%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQ 61
+ ++ LI+ +W + F + + + + + ++ P
Sbjct: 16 VLFVLLILGWWLRRSRPRLATAFFAVGLGGLWLMSLPVAVEFAARKIEQVPPLPQQQWAT 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K + I+ +GG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTWGT-DTPTGLGLERLRLAARLSK-----TSGLPILTTGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L E S T++NA ++++++ + K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQSL-HDDFGVTARWQEGLSRTTWENATMTAAVLQPLGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H++R++ F+ G ++ +L + +P S F + + L E G+L+
Sbjct: 189 AWHMQRARWSFETAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|294636892|ref|ZP_06715221.1| putative membrane protein [Edwardsiella tarda ATCC 23685]
gi|291089900|gb|EFE22461.1| putative membrane protein [Edwardsiella tarda ATCC 23685]
Length = 265
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 90/235 (38%), Gaps = 19/235 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q + K+ ++ +F + + LL L+ Y + + +V+L
Sbjct: 31 WFSRHQRMGKVLVSLAWLGIF-LLSLQPLADRLLAPLEAEYPTLNH----GQQAHYVVVL 85
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G T P A S +R+ E +R + +I++G + + + +
Sbjct: 86 GGGYTYNP-QWAPSSNLINNSLARLTEGIR----QLALNPQAQLILTGASARGNPYSSAA 140
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V GV I + DT Q A+ + + +ILV+SA HL R+ +F
Sbjct: 141 VAAQVARSLGVAEQRIIVLDSPRDTAQEAEAVAE---RVGHARLILVTSANHLPRALRFF 197
Query: 193 QHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+H G++ + ++ LN + IP +E A E +G L G
Sbjct: 198 RHQGLDPIPAPANQLAITSPLNPWERWIPSPLYLGHSERAWYETLGRLWQGLLGQ 252
>gi|254931387|ref|ZP_05264746.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|293582938|gb|EFF94970.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|328475355|gb|EGF46128.1| hypothetical protein LM220_00285 [Listeria monocytogenes 220]
gi|332311412|gb|EGJ24507.1| Integral membrane protein [Listeria monocytogenes str. Scott A]
Length = 344
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 108/239 (45%), Gaps = 25/239 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L + LI++++ + ++ I + + + + +G+ + F YQ
Sbjct: 105 LGILALIITWFGSILKTGSPILGIVV-VFIVALVGYFSFLFLSFLLSTFLYQFNF----P 159
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGG 121
+ + + +++LG+G +P + SR+ ++ Y K + T I+SGG
Sbjct: 160 RYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIKFYDKQYAKKGKRATFIVSGG 212
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVS 180
++E+ LLE G++ + I +E QS++T QN +FS + + M N + +
Sbjct: 213 QGANETISEAEAMRGYLLEKGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFST 272
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y +
Sbjct: 273 NNFHLFRAGIYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMYKK 320
>gi|330887933|gb|EGH20594.1| hypothetical protein PSYMO_03468 [Pseudomonas syringae pv. mori
str. 301020]
Length = 256
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 92/240 (38%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQ 61
+ ++ LI+ +W + F + + + + + ++ P
Sbjct: 16 VLFVLLILGWWLRRSRPHLATAFFAFGLGGLWLMSLPVAVEFAARKIEQVPPLPQQQWAT 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL + I+ +GG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTWGT-DTPTGLGLERLRLAARL-----SKTSGLPILTTGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L E S T++NA ++++++ + K ++LV+
Sbjct: 130 LHFDQPPSEASIMAQSL-HDDFGVTARWQEGLSRTTWENATMTAAVLQPLGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H++R++ F+ G ++ +L + +P S F + + L E G+L+
Sbjct: 189 AWHMQRARWSFEQAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|24373225|ref|NP_717268.1| hypothetical protein SO_1657 [Shewanella oneidensis MR-1]
gi|24347454|gb|AAN54712.1|AE015612_1 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 244
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 46/225 (20%), Positives = 91/225 (40%), Gaps = 12/225 (5%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + ++ L + L+K L+ Y S ++++LG+
Sbjct: 29 WRRPRLAKWAIAGAFTLLLVLSSQFSVDYLVKPLETQYPINASSIT---GQCVVMVLGSA 85
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+ I A++ S + +R+ E +R K CT+++SG + + V
Sbjct: 86 HSDIEDATAVQ-SLSAVALARLTEGLRQLK----LGQDCTLVVSGWGGELTKHPHAEVMA 140
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
E GV+ I + DT + AQ+ + +++ LV+SA H+ R+ F
Sbjct: 141 KAAAELGVDASRIIQFPLARDTLEEAQYFKD---HFGNQSVRLVTSASHMPRAMAIFSGK 197
Query: 196 GINTKASCSDYLNA-YYSIIPLSANFYLTELALKEYIGILIAYYR 239
G+ A+ +D+ + + N ++ AL EYIG L + +
Sbjct: 198 GLIASAAPTDFRARDDFYWRFTADNLLASQRALHEYIGRLWLWIK 242
>gi|85058977|ref|YP_454679.1| hypothetical protein SG0999 [Sodalis glossinidius str. 'morsitans']
gi|84779497|dbj|BAE74274.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 275
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 88/238 (36%), Gaps = 18/238 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
++ W ++ + +++L + + + LL L+ Y P P +
Sbjct: 27 LMLLWLNRGTKTARLLLSAGWLVLLA-LSLQPVADRLLAPLEAHY--PTWQPH-GETVKW 82
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T P P + S R+ E +R +++ T++ +G + + +
Sbjct: 83 IVVLGGGYTWNPDWPPSANLIN-NSLPRVTEGIRQWRAH----PSATMVFTGANAPGNLV 137
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + + GV I DT Q A + ++ ++LV+SA HL R+
Sbjct: 138 SSAEAASRVAQSLGVPAAAIMTLDSPRDTHQEAASVARLVGQA---PLMLVTSANHLPRA 194
Query: 189 QLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+F G+ ++ L I+P +E E +G +
Sbjct: 195 MGFFTAAGLQPIPVPANQLAITSPLQPQEKILPSPLWLGHSERVWYETLGQVWQRLLA 252
>gi|308186266|ref|YP_003930397.1| hypothetical protein Pvag_0746 [Pantoea vagans C9-1]
gi|308056776|gb|ADO08948.1| Uncharacterized protein ycbC [Pantoea vagans C9-1]
Length = 261
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 42 PTILLKHLQFSYQRPLLSPQWK--KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
LL L Y P W + + IV+LG G T P + A S R+ E
Sbjct: 59 ADRLLLPLDNRY------PTWNGAEKVDYIVVLGGGYTFNP-VWAPSSNLLNNSLPRVAE 111
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+R ++ + T+I +G + + + V GV R+ I++ Q DT
Sbjct: 112 GIRQWQ----RNPQSTLIFTGAAGGTNPKSSAWVAAQVAESLGVPREHIQILDQPRDTAD 167
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSI 213
AQ +++ + ++LV+SA H+ R+ +F G+ A+ ++ LN +
Sbjct: 168 EAQAVKTVV---GDRPMLLVTSANHMPRAIRFFHAVGLKPIAAPANQLAITSPLNGWERA 224
Query: 214 IPLSANFYLTELALKEYIGILIAYYRG 240
IP S +E A+ E +G L+ +G
Sbjct: 225 IPSSIWLSHSERAVYETLGTLLQRLKG 251
>gi|303253664|ref|ZP_07339802.1| hypothetical protein APP2_0852 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248075|ref|ZP_07530104.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|302647584|gb|EFL77802.1| hypothetical protein APP2_0852 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855473|gb|EFM87647.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
Length = 246
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 57/246 (23%), Positives = 103/246 (41%), Gaps = 26/246 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + W+F ++ YW L + + F+ L + T L L L+
Sbjct: 18 IAVIWLFSLICYWLNLKKISYSLAFLGIGSL--YLFSTPYVATKLTDSL---VTEDNLAL 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K IV+LG G I ++ E MR Y + Q ++I+G
Sbjct: 73 EDYKKAQAIVVLGGGVRDSKEI-----YNPIAVGNQALERMR-YAAYLQKETQLPLLITG 126
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
P +G +E+ N+ + LE ++ T +NAQFS ++ IILV+
Sbjct: 127 SSP--NGTSEAKTMANEF-QYFFSVSTQWLEEKAKTTKENAQFSRELLAKEGINKIILVT 183
Query: 181 SAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ +H+KR+++ F+ G + ++Y+N + IP S L+LKE++G
Sbjct: 184 NQWHMKRAKMLFEKQGFEVLPASIGHGVTPTEYIN-FAYFIPQSGAMDSIMLSLKEWLG- 241
Query: 234 LIAYYR 239
Y++
Sbjct: 242 ---YWK 244
>gi|70732742|ref|YP_262505.1| hypothetical protein PFL_5437 [Pseudomonas fluorescens Pf-5]
gi|68347041|gb|AAY94647.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 253
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 86/230 (37%), Gaps = 16/230 (6%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWK---KDGNIIVLLG 73
+ R CF L +P ++ PL QW + ++IV+LG
Sbjct: 28 RRSRPRLAGWCFALGLGGFWLMSLPVMVEWGARGLERLPPLPQSQWASLAEQADVIVVLG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+G +P+ R RL K+ ++ SGG E+ +
Sbjct: 88 SGRERGDPAWG-SDQPTGVGLERERYASRLAKAS-----GLPVLTSGGLHYGTPPTEAAL 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
LL+ E +S T++NAQFS+ ++ + K +++V+ A+H+ RS F+
Sbjct: 142 MAQSLLD-DFGVTVRWQEGRSRTTWENAQFSAEVLLPLGIKRVVVVTQAWHMPRSVWSFE 200
Query: 194 HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H G + +L +P + + + L E +G L
Sbjct: 201 HAGFEVVPAPVGFLGVDNARPLGGWMPEFKSIWQSGQLLNEAVGQLGYRL 250
>gi|46907236|ref|YP_013625.1| hypothetical protein LMOf2365_1025 [Listeria monocytogenes serotype
4b str. F2365]
gi|47094138|ref|ZP_00231859.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858]
gi|226223622|ref|YP_002757729.1| hypothetical protein Lm4b_01024 [Listeria monocytogenes Clip81459]
gi|254823724|ref|ZP_05228725.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|254827949|ref|ZP_05232636.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|254994315|ref|ZP_05276505.1| hypothetical protein LmonocytoFSL_16035 [Listeria monocytogenes FSL
J2-064]
gi|255521903|ref|ZP_05389140.1| hypothetical protein LmonocFSL_11877 [Listeria monocytogenes FSL
J1-175]
gi|46880503|gb|AAT03802.1| putative membrane protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|47017485|gb|EAL08297.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858]
gi|225876084|emb|CAS04790.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258600331|gb|EEW13656.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|293592945|gb|EFG00706.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
Length = 344
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 108/239 (45%), Gaps = 25/239 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L + LI++++ + ++ I + + + + +G+ + F YQ
Sbjct: 105 LGILALIITWFGSILKTGSPILGIVV-VFIVALVGYFSFLFLSFLLSTFLYQFNF----P 159
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGG 121
+ + + +++LG+G +P + SR+ ++ Y K + T I+SGG
Sbjct: 160 RYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIKFYDKQYAKKGKRATFIVSGG 212
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVS 180
++E+ L+E G++ + I +E QS++T QN +FS + + M N + +
Sbjct: 213 QGANETISEAEAMRGYLIEKGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFST 272
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y +
Sbjct: 273 NNFHLFRAGIYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMYKK 320
>gi|307261514|ref|ZP_07543183.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306868797|gb|EFN00605.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 246
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 28/247 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + W+F ++ YW L + + F+ L + T L L L+
Sbjct: 18 IAVIWLFSLICYWLNLKKISYSLAFLGIGSL--YLFSTPYVATKLTDSL---VTEDNLTL 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K IV+LG G I ++ E MR Y + Q ++I+G
Sbjct: 73 EDYKKAQAIVVLGGGVRDSKEI-----YNPIAVGNQALERMR-YAAYLQKETQLPLLITG 126
Query: 121 GDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
P +G +E+ N+ V LE ++ T +NAQFS ++ IILV
Sbjct: 127 SSP--NGTSEAKTMANEFQYFFSVPTQ--WLEEKAKTTKENAQFSRELLAKEGINKIILV 182
Query: 180 SSAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++ +H+KR+++ F+ G + ++Y+N + IP S L+LKE++G
Sbjct: 183 TNQWHMKRAKMLFEKQGFEVLPASIGHGVTPTEYIN-FAYFIPQSGAMDSIMLSLKEWLG 241
Query: 233 ILIAYYR 239
Y++
Sbjct: 242 ----YWK 244
>gi|302877595|ref|YP_003846159.1| hypothetical protein Galf_0351 [Gallionella capsiferriformans ES-2]
gi|302580384|gb|ADL54395.1| protein of unknown function DUF218 [Gallionella capsiferriformans
ES-2]
Length = 254
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 46/231 (19%), Positives = 86/231 (37%), Gaps = 15/231 (6%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
+ Q + ++L L L+ + IV
Sbjct: 26 GIYLFYRQPKFARALCTSALVLLWIASTPYFAEGALHLLENQT---HALTADSPKASAIV 82
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG GT + S + R+ RL Q ++ I+++GG P +G +E
Sbjct: 83 ILGGGTYFHAPEYDNQDTVSEATLLRLRYGARL-----QRELNAPILVTGGKPLGNGTSE 137
Query: 131 SIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+ L E + E S +TF+NA++S ++ ++I LV+ A+H+ RS
Sbjct: 138 AHQMRTVLEEDFRIPAR--WTEDASDNTFENARYSYQTLQKAGIRDIYLVTHAWHMLRSA 195
Query: 190 LYFQHFGINTKASC----SDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
F+ G + + Y + IP + +++ + E IG+L
Sbjct: 196 AAFRAAGFVVIEAPTCFTTRYQTNLLAFIPRAEALRDSKIFVHEVIGLLWY 246
>gi|104783752|ref|YP_610250.1| hypothetical protein PSEEN4811 [Pseudomonas entomophila L48]
gi|95112739|emb|CAK17467.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 253
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 92/219 (42%), Gaps = 15/219 (6%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD----GNIIVLLGNGTTIIPTIP 83
CF + + +P ++ + + P L KD + IV+LG G
Sbjct: 38 CFTVGLGGVWLMSLPLVVEQAARALETEPPLELASWKDLATKADAIVVLGAGRERGDPAW 97
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+P++ + R+ +L K+ ++ SGG +E+ + ++L E+
Sbjct: 98 GGSDQPTYVALERMRFAAQLAKAS-----GLPVLTSGGLHYGTPPSEAQLMADRL-EADF 151
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
E S T++NA F++ +++ + + +++V+ A+H++RS+ F+ G +
Sbjct: 152 GVRVTWKEEASRTTWENADFTAKLLQPLGIRRVVVVTQAWHMQRSRWSFERAGFEVVPAP 211
Query: 204 SDYL-----NAYYSIIPLSANFYLTELALKEYIGILIAY 237
+L + ++P + + L E +G+L
Sbjct: 212 VGFLGREHARPFGGLLPEGRAMWQSGQLLNEAVGLLGYR 250
>gi|77465405|ref|YP_354908.1| hypothetical protein RSP_3403 [Rhodobacter sphaeroides 2.4.1]
gi|77389823|gb|ABA81007.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 280
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 15/217 (6%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L F +G + + L L+ + P + II+L G+ R
Sbjct: 63 LAFLAVGALPLSYLALSSLERVWP---ADPPVGEVAGIILL--GGSEDAAAARKWRRPAV 117
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG--LAESIVYNNKLLESGVERDDI 148
++ R T+ L + + ++ +GG + G + E+ + L+ +GV+ +
Sbjct: 118 TEAGDRYLATIALARRFPE----ARVLFTGGSGRLFGAEIPEARIAREILVSAGVDPARL 173
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI-NTKASCSDYL 207
LE QS +T +NA+F+ +++ N + +LV+SA+H+ R+ F G + +DY
Sbjct: 174 ILEGQSRNTAENARFAKALVANQGQGSWLLVTSAFHMPRAVETFCAAGWQDLVPWPTDYR 233
Query: 208 NAYYSI---IPLSANFYLTELALKEYIGILIAYYRGN 241
A L+ N L +A++E+IGIL G
Sbjct: 234 TASLRDGIGWDLARNLDLLNVAVREWIGILAYRVTGR 270
>gi|254852499|ref|ZP_05241847.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|300764214|ref|ZP_07074209.1| hypothetical protein LMHG_10188 [Listeria monocytogenes FSL N1-017]
gi|258605808|gb|EEW18416.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|300515204|gb|EFK42256.1| hypothetical protein LMHG_10188 [Listeria monocytogenes FSL N1-017]
Length = 344
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 46/239 (19%), Positives = 108/239 (45%), Gaps = 25/239 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L + LI++++ + ++ I + + + + +G+ + F YQ
Sbjct: 105 LGILALIITWFGSILKTGSPILGIVV-VFIVALVGYFSFLFLSFLLSTFLYQFNF----P 159
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGG 121
+ + + +++LG+G +P + SR+ ++ Y K + T I+SGG
Sbjct: 160 RYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIKFYDKQYAKKGKRATFIVSGG 212
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVS 180
++E+ L+E G++ + I +E QS++T QN +FS + + + N + +
Sbjct: 213 QGANETISEAEAMRGYLIEKGIDENFIIMEDQSVNTLQNMKFSKAKMDAILSNYNSLFST 272
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y +
Sbjct: 273 NNFHLFRAGIYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMYKK 320
>gi|126463807|ref|YP_001044920.1| hypothetical protein Rsph17029_3048 [Rhodobacter sphaeroides ATCC
17029]
gi|126105618|gb|ABN78148.1| protein of unknown function DUF218 [Rhodobacter sphaeroides ATCC
17029]
Length = 280
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 15/217 (6%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L+F +G + + L L+ + P + II+L G+ R
Sbjct: 63 LVFLAVGALPLSYLALSSLERGWP---ADPPVGEVAGIILL--GGSEDAAAARKWRRPAV 117
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG--LAESIVYNNKLLESGVERDDI 148
++ R T+ L + + ++ +GG + G + E+ + L+ +GV+ +
Sbjct: 118 TEAGDRYLATIALARRFPE----ARVLFTGGSGRLFGAEIPEARIAREILVSAGVDPARL 173
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI-NTKASCSDYL 207
LE QS +T +NA+F+ +++ N + +LV+SA+H+ RS F G N +DY
Sbjct: 174 ILEGQSRNTAENARFAKALVANQGQGSWLLVTSAFHMPRSVETFCAAGWQNLVPWPTDYR 233
Query: 208 NAYYSI---IPLSANFYLTELALKEYIGILIAYYRGN 241
A L+ N L +A++E+IGIL G
Sbjct: 234 TASLRDGIGWDLARNLDLLNVAVREWIGILAYRVTGR 270
>gi|332561062|ref|ZP_08415380.1| hypothetical protein RSWS8N_18489 [Rhodobacter sphaeroides WS8N]
gi|332274860|gb|EGJ20176.1| hypothetical protein RSWS8N_18489 [Rhodobacter sphaeroides WS8N]
Length = 267
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 15/217 (6%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L F +G + + L L+ + P + II+L G+ R
Sbjct: 50 LAFLAVGALPLSYLALSSLERVWP---ADPPVGEVAGIILL--GGSEDAAAARKWRRPAV 104
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG--LAESIVYNNKLLESGVERDDI 148
++ R T+ L + + ++ +GG + G + E+ + L+ +GV+ +
Sbjct: 105 TEAGDRYLATIALARRFPE----ARVLFTGGSGRLFGAEIPEARIAREILVSAGVDPARL 160
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI-NTKASCSDYL 207
LE QS +T +NA+F+ +++ N + +LV+SA+H+ R+ F G + +DY
Sbjct: 161 ILEGQSRNTAENARFAKALVANQGQGSWLLVTSAFHMPRAVETFCAAGWQDLVPWPTDYR 220
Query: 208 NAYYSI---IPLSANFYLTELALKEYIGILIAYYRGN 241
A L+ N L +A++E+IGIL G
Sbjct: 221 TASLRDGIGWDLARNLDLLNVAVREWIGILAYRVTGR 257
>gi|46143765|ref|ZP_00134210.2| COG1434: Uncharacterized conserved protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208505|ref|YP_001053730.1| hypothetical protein APL_1031 [Actinobacillus pleuropneumoniae L20]
gi|303251036|ref|ZP_07337222.1| hypothetical protein APP6_0335 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307245941|ref|ZP_07528024.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307250279|ref|ZP_07532233.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307252669|ref|ZP_07534561.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|126097297|gb|ABN74125.1| hypothetical protein APL_1031 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|302650046|gb|EFL80216.1| hypothetical protein APP6_0335 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306853160|gb|EFM85382.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306857720|gb|EFM89822.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306859845|gb|EFM91866.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 246
Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 28/247 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + W+F ++ YW L + + F+ L + T L L L+
Sbjct: 18 IAVIWLFSLICYWLNLKKISYSLAFLGIGSL--YLFSTPYVATKLTDSL---VTEDNLTL 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K IV+LG G I ++ E MR Y + Q ++I+G
Sbjct: 73 EDYKKAQAIVVLGGGVRDSKEI-----YNPIAVGNQALERMR-YAAYLQKETQLPLLITG 126
Query: 121 GDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
P +G +E+ N+ V LE ++ T +NAQFS ++ IILV
Sbjct: 127 SSP--NGTSEAKTMANEFQYFFSVPTQ--WLEEKAKTTKENAQFSRELLAKEGINKIILV 182
Query: 180 SSAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++ +H+KR+++ F+ G + ++Y+N + IP S L+LKE++G
Sbjct: 183 TNQWHMKRAKMLFEKQGFEVLPASIGHGVTPAEYIN-FAYFIPQSGAMDSIMLSLKEWLG 241
Query: 233 ILIAYYR 239
Y++
Sbjct: 242 ----YWK 244
>gi|254369442|ref|ZP_04985454.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|157122392|gb|EDO66532.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 158
Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
++EP+ +Y RI +T +Y Q IIISGG P L+E+ +Y + L + G+
Sbjct: 8 GKLEPTLSAYDRILKTAEVYHQHLQQ-----IIISGGAPFGEKLSEAEIYADVLDKLGIP 62
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ I LE S +T+QNA+F ++ N + LV+ H KR+++ F F INT + S
Sbjct: 63 KSKIILEKNSKNTYQNAEFIKKILMNDK-NTYCLVTGGIHYKRAKIIFDKFAINTISIAS 121
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
I+P + NFY+T+ + EY+GI+ Y
Sbjct: 122 SKFVPNIKILPNAYNFYITQNIVHEYLGIIRIYL 155
>gi|90424829|ref|YP_533199.1| hypothetical protein RPC_3338 [Rhodopseudomonas palustris BisB18]
gi|90106843|gb|ABD88880.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB18]
Length = 264
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 15/211 (7%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+ + +LL L + P + +IVL G+ I + R + +
Sbjct: 54 FSPLGNVLLLSLTERF--PAWQADGRAPDGVIVLGGS---IDAEVSTARNALELDASA-- 106
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSL 155
E + + + I+ SGG + +AE+ + L G+ + I LE +S
Sbjct: 107 -ERIVVMLQLARRFPDARIVFSGGSANLLQAPVAEAPIAGRLLHSFGIAPERIVLEDRSR 165
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY---- 211
T +NA F+ +++ G+ +LV+SA+H+ RS F+ G + +A D+ +
Sbjct: 166 TTAENAAFTRALVTPAAGERWLLVTSAFHMPRSIAAFRAVGFDVEAYPVDWRTRGWIDAA 225
Query: 212 -SIIPLSANFYLTELALKEYIGILIAYYRGN 241
LSA T++A+ E++G++ G
Sbjct: 226 MPFDRLSAGLARTDVAVHEWVGLIAYRLAGR 256
>gi|123966515|ref|YP_001011596.1| hypothetical protein P9515_12821 [Prochlorococcus marinus str. MIT
9515]
gi|123200881|gb|ABM72489.1| Hypothetical protein P9515_12821 [Prochlorococcus marinus str. MIT
9515]
Length = 236
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 26/243 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
LI+ ++ + +R I+ +L+FS G+ L + L++ ++R S DG
Sbjct: 2 LILLVIFIIRKKLRFIYSALIILLVFS---NGVFSECLWRLLEYPWKRLEFSSINSADG- 57
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD--PQK 125
IV+L G + + R + LYK+ K + +I +GG
Sbjct: 58 -IVVLSGGRHLP---LGNTKIIEWHDPDRFLAGIELYKANKSN----KLIFTGGVSLLTS 109
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNIILVSSA 182
+ E +Y + + G+ + D+ +T + A+ +++ K + K IILV+SA
Sbjct: 110 NLPPEGTIYIKEAISMGIPKKDVLTTYPVYNTLEEAEAVKALLYREKPLSKKKIILVTSA 169
Query: 183 YHLKRSQLYFQHFGINTKASCSDY---------LNAYYSIIPLSANFYLTELALKEYIGI 233
+H+KR++ F+ G+N D+ L + IP S+N Y + +A++E IG
Sbjct: 170 FHMKRAKKVFEREGMNVLPYPVDFKSSRNFISSLTNIFKWIPSSSNLYKSSMAVREIIGR 229
Query: 234 LIA 236
+I
Sbjct: 230 MIY 232
>gi|115315002|ref|YP_763725.1| hypothetical protein FTH_1231 [Francisella tularensis subsp.
holarctica OSU18]
gi|167010037|ref|ZP_02274968.1| hypothetical protein Ftulh_04754 [Francisella tularensis subsp.
holarctica FSC200]
gi|115129901|gb|ABI83088.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
Length = 158
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
++EP+ +Y RI +T +Y Q IIISGG P L+E+ +Y + L + G+
Sbjct: 8 GKLEPALSAYDRILKTAEVYHQHLQQ-----IIISGGAPFGEKLSEAEIYADVLDKLGIP 62
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ I LE S +T+QNA+F ++ N + LV+ H KR+++ F F INT + S
Sbjct: 63 KSKIILEKNSKNTYQNAEFIKKILMNDK-NTYCLVTGGIHYKRAKIIFDKFTINTISIAS 121
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
I+P + NFY+T+ + EY+GI+ Y
Sbjct: 122 SKFVPNIKILPNAYNFYITQNIVHEYLGIIRIYL 155
>gi|124007832|ref|ZP_01692534.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123986778|gb|EAY26559.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 256
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 21/251 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQ-SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
M ++W+ L+ ++ L + R+ + LL+ F I+ LL L + PL S
Sbjct: 14 MPVTWLCLVFTWALLTKKPRRRRQLLRTGVFLLWLFTNPFIVNQALL--LWEAPPTPLHS 71
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ D I++ G T P R+ + RI + + LY+ K I+IS
Sbjct: 72 IRQNYDVGIVL---TGVTNTDKKPHDRVYLD-KGGDRITQALMLYRVGKIK----KILIS 123
Query: 120 GGD---PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKN 175
GG Q+ AE+ + LL++ V DI +ET++ +T +NA ++ ++ K ++
Sbjct: 124 GGSFDPKQRLERAEAYLLKQVLLQAKVPSHDIIIETKARNTRENALNTAKILNKQFPRQS 183
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKE 229
+L++SA+H++R+ F+ GI D+ +S+ P Y + E
Sbjct: 184 YLLITSAFHIRRAVGCFRQAGIRVTPFSVDFYTIDKGFTFPFSLFPAEKALYKWYVLSHE 243
Query: 230 YIGILIAYYRG 240
IG ++ G
Sbjct: 244 VIGYIVYKVLG 254
>gi|323137866|ref|ZP_08072941.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
gi|322396869|gb|EFX99395.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
Length = 263
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 14/210 (6%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+G + L L+ + RP +IVL GT + + R+
Sbjct: 54 FGPVGQFLGAPLESRFPRPGD--DMPAPDGVIVL--GGTVDEKLSAELGHTAMVDAAERL 109
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
+ L + + I+ +GG + E+ + G++ DI E +S
Sbjct: 110 TAPIALKRRY----PNARIVFTGGTAALRGSPFTEAEGVKRFWRDVGLDAGDILYEDRSR 165
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA--YYSI 213
+TF+NA F+ +++ G+ +LV+SA H+ RS F+ A DY + I
Sbjct: 166 NTFENAIFTRELVQPKPGERWLLVTSAMHMPRSIGIFRKANFPVIAYPVDYRTNGKFSFI 225
Query: 214 IPLSA--NFYLTELALKEYIGILIAYYRGN 241
+P A + E A E++G++ G
Sbjct: 226 LPRFAVKAIGVVEFAAHEWMGLVAYRLTGK 255
>gi|225626650|ref|ZP_03784689.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254707196|ref|ZP_05169024.1| hypothetical protein BpinM_09538 [Brucella pinnipedialis
M163/99/10]
gi|254713318|ref|ZP_05175129.1| hypothetical protein BcetM6_08187 [Brucella ceti M644/93/1]
gi|256030782|ref|ZP_05444396.1| hypothetical protein BpinM2_09053 [Brucella pinnipedialis
M292/94/1]
gi|256254188|ref|ZP_05459724.1| hypothetical protein BcetB_07825 [Brucella ceti B1/94]
gi|256368571|ref|YP_003106077.1| hypothetical protein BMI_I109 [Brucella microti CCM 4915]
gi|260169686|ref|ZP_05756497.1| hypothetical protein BruF5_15273 [Brucella sp. F5/99]
gi|225618307|gb|EEH15350.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|255998729|gb|ACU47128.1| hypothetical protein BMI_I109 [Brucella microti CCM 4915]
Length = 272
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 14 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 73 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAARFYHECQSSGVSCTFITTG 130
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 131 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 190
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL S S +F +LAL E IG
Sbjct: 191 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 247
>gi|225851646|ref|YP_002731879.1| hypothetical protein BMEA_A0113 [Brucella melitensis ATCC 23457]
gi|225640011|gb|ACN99924.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
Length = 272
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 14 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 73 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAARFYHECQSSGVSCTFITTG 130
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 131 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 190
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL S S +F +LAL E IG
Sbjct: 191 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 247
>gi|190150356|ref|YP_001968881.1| hypothetical protein APP7_1087 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307254915|ref|ZP_07536737.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307259356|ref|ZP_07541083.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307263699|ref|ZP_07545307.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189915487|gb|ACE61739.1| hypothetical protein APP7_1087 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306862156|gb|EFM94128.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306866592|gb|EFM98453.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306870953|gb|EFN02689.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 246
Score = 144 bits (365), Expect = 6e-33, Method: Composition-based stats.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 28/247 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + W+F ++ YW L + + F+ L + T L L L+
Sbjct: 18 IAVIWLFSLICYWLNLKKISYSLAFLGIGSL--YLFSTPYVATKLTDSL---VTEDNLAL 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K IV+LG G I ++ E MR Y + Q ++I+G
Sbjct: 73 EDYKKAQAIVVLGGGVRDSKEI-----YNPIAVGNQALERMR-YAAYLQKETQLPLLITG 126
Query: 121 GDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
P +G +E+ N+ V LE ++ T +NAQFS ++ IILV
Sbjct: 127 SSP--NGTSEAKTMANEFQYFFSVPTQ--WLEEKAKTTKENAQFSRELLAKEGINKIILV 182
Query: 180 SSAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++ +H+KR+++ F+ G + ++Y+N + IP S L+LKE++G
Sbjct: 183 TNQWHMKRAKMLFEKQGFEVLPASIGHGVTPAEYIN-FAYFIPQSGAMDSIMLSLKEWLG 241
Query: 233 ILIAYYR 239
Y++
Sbjct: 242 ----YWK 244
>gi|23501020|ref|NP_697147.1| hypothetical protein BR0106 [Brucella suis 1330]
gi|163842380|ref|YP_001626784.1| hypothetical protein BSUIS_A0110 [Brucella suis ATCC 23445]
gi|254705285|ref|ZP_05167113.1| hypothetical protein Bsuib36_15473 [Brucella suis bv. 3 str. 686]
gi|23346882|gb|AAN29062.1| conserved hypothetical protein [Brucella suis 1330]
gi|163673103|gb|ABY37214.1| protein of unknown function DUF218 [Brucella suis ATCC 23445]
Length = 272
Score = 144 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 14 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMSRLQEPYSSKLAEP 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 73 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAARFYHECQSSGVSCTFITTG 130
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 131 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 190
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL S S +F +LAL E IG
Sbjct: 191 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 247
>gi|114048174|ref|YP_738724.1| hypothetical protein Shewmr7_2682 [Shewanella sp. MR-7]
gi|113889616|gb|ABI43667.1| protein of unknown function DUF218 [Shewanella sp. MR-7]
Length = 244
Score = 144 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 13/241 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIR-KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
M + +I L++ L+ + R + + L + + L+K L+ Y ++
Sbjct: 13 MPIPFILLLLLLSLLIWRKPRLAKWAIGGAFTLLLVLSSQLSVDYLVKPLETQYP---IN 69
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
++++LG+G IP A++ S + +R+ E +R Q CT+++S
Sbjct: 70 STPIAGTCVVMVLGSGHADIPGATAVQ-SLSTVALTRLTEGLR----QLQLGQDCTLVVS 124
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + + + V +E GV+ I DT + A + + + + LV
Sbjct: 125 GWEGELTQHPHAEVMAKAAIELGVDASRIVQLPLPRDTIEEAHYFKE---HFGNQAVRLV 181
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA-NFYLTELALKEYIGILIAYY 238
+SA H+ RS F G+ A+ +D+ L+A N ++ A+ EYIG L +
Sbjct: 182 TSASHMPRSMAIFSGQGLAASAAPTDFRARDGFYWRLTADNLLASQRAIHEYIGRLWLWI 241
Query: 239 R 239
+
Sbjct: 242 K 242
>gi|221369405|ref|YP_002520501.1| hypothetical protein RSKD131_3568 [Rhodobacter sphaeroides KD131]
gi|221162457|gb|ACM03428.1| Hypothetical Protein RSKD131_3568 [Rhodobacter sphaeroides KD131]
Length = 267
Score = 144 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 15/217 (6%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L F +G + + L L+ + P + II+L G+ R
Sbjct: 50 LAFLAVGALPLSYLALSSLERVWP---ADPPVGEVAGIILL--GGSEDAAAARKWRRPAV 104
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG--LAESIVYNNKLLESGVERDDI 148
++ R T+ L + + ++ +GG + G + E+ + L+ +GV+ +
Sbjct: 105 TEAGDRYLATIALARRFPE----ARVLFTGGSGRLFGAEIPEARIAREILVSAGVDPARL 160
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI-NTKASCSDYL 207
LE QS +T +NA F+ +++ N + +LV+SA+H+ R+ F G + +DY
Sbjct: 161 ILEGQSRNTAENAHFAKALVANQGQGSWLLVTSAFHMPRAVETFCAAGWQDLVPWPTDYR 220
Query: 208 NAYYSI---IPLSANFYLTELALKEYIGILIAYYRGN 241
A L+ N L +A++E+IGIL G
Sbjct: 221 TASLRDGIGWDLARNLDLLNVAVREWIGILAYRVTGR 257
>gi|209964476|ref|YP_002297391.1| hypothetical protein RC1_1164 [Rhodospirillum centenum SW]
gi|209957942|gb|ACI98578.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 271
Score = 144 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 95/258 (36%), Gaps = 36/258 (13%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWG--------------------IIPTILL 46
F++ + L + + + F GW + +L
Sbjct: 3 FILSKLFWTLAAPGNALLLILLAGMGFLLAGWQRTGLWLAGGATVALAAVATLPVGAWML 62
Query: 47 KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS-YSRIFETMRLYK 105
L+ + P P + I++LG + P + A R +P+ R+ E L +
Sbjct: 63 WSLESRFPSPATLP---GRVDGIIVLGG--AVRPILTADRGQPALNEHAERLTEIPALAR 117
Query: 106 SCKQHSMHCTIIISGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
I+ +GG + L E+ V G + + E +S +T++NA
Sbjct: 118 RY----PDARIVFTGGSGLVFEQDLKEAPVARAAWERMGFDTARVLFEQESRNTWENALL 173
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI----IPLSAN 219
S + ++G+ +LV+SA H+ RS F+ G N D+ S+ L+
Sbjct: 174 SRDLAHPVEGEAWLLVTSAMHMPRSVGIFRRIGWNVVPYPVDFHVPDRSLYRIGFDLTDG 233
Query: 220 FYLTELALKEYIGILIAY 237
AL EYIG+++
Sbjct: 234 LRSLSYALHEYIGLVVYR 251
>gi|254718327|ref|ZP_05180138.1| hypothetical protein Bru83_02063 [Brucella sp. 83/13]
gi|265983286|ref|ZP_06096021.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306837219|ref|ZP_07470109.1| protein of unknown function DUF218 [Brucella sp. NF 2653]
gi|264661878|gb|EEZ32139.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306407678|gb|EFM63867.1| protein of unknown function DUF218 [Brucella sp. NF 2653]
Length = 263
Score = 144 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 5 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 64 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAARFYHECQSSGVSCTFITTG 121
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 122 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL S S +F +LAL E IG
Sbjct: 182 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 238
>gi|192291940|ref|YP_001992545.1| hypothetical protein Rpal_3570 [Rhodopseudomonas palustris TIE-1]
gi|192285689|gb|ACF02070.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
TIE-1]
Length = 264
Score = 144 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 52/245 (21%), Positives = 100/245 (40%), Gaps = 18/245 (7%)
Query: 6 IFLIVSYWHLLCQSIRK-IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+ + +L + R + ++L G+ + +LL L + P +
Sbjct: 21 MICVAGLVLMLTRWWRAGRALLIGGVVLLLIAGYSPLGNVLLLSLSERF--PPWHEAGRA 78
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQS-YSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
IIVL G I + R + R+ + L + + I+ SGG
Sbjct: 79 PDGIIVLGGA---IDSELSVARNTLEVDASAERVLAALDLARRYPK----ARIVYSGGSG 131
Query: 124 Q--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ +AE+ + L G+ D + LE +S T +NA ++ +++ G+ +LV+S
Sbjct: 132 NLIQRSVAEAPLAGELLERFGLASDRLVLEDKSRTTAENAAYTRALVVPKPGELWLLVTS 191
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ RS + F+ G + D+ A + L+A T++A+ E+ G+L
Sbjct: 192 AFHMPRSIIAFRAAGFDVVPYPVDWRTRGSEDAARTFSTLAAGLARTDVAVHEWAGLLAY 251
Query: 237 YYRGN 241
G
Sbjct: 252 RLGGK 256
>gi|315281729|ref|ZP_07870291.1| integral membrane protein [Listeria marthii FSL S4-120]
gi|313614619|gb|EFR88201.1| integral membrane protein [Listeria marthii FSL S4-120]
Length = 356
Score = 144 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 44/241 (18%), Positives = 100/241 (41%), Gaps = 24/241 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ I + W + + + + +G+ + F YQ
Sbjct: 114 IIGLGILAFIITWFVSILKTGSPILGIAVVFIVALVGYFSFLFLSFLLSTFLYQFNF--- 170
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIIS 119
+ + + +++LG+G +P + SR+ ++ Y K + T I+S
Sbjct: 171 -PRYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIKFYDKQYAKKGKRATFIVS 222
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIIL 178
GG ++E+ LL G++ + I +E +S++T QN +FS + + M N +
Sbjct: 223 GGQGANETISEAEAMRGYLLNQGIDENFIIMEDKSVNTLQNMKFSKAKMDAIMPSYNSLF 282
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y
Sbjct: 283 STNNFHLFRAGIYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMYK 331
Query: 239 R 239
+
Sbjct: 332 K 332
>gi|148560500|ref|YP_001258145.1| hypothetical protein BOV_0103 [Brucella ovis ATCC 25840]
gi|254700918|ref|ZP_05162746.1| hypothetical protein Bsuib55_08674 [Brucella suis bv. 5 str. 513]
gi|254709259|ref|ZP_05171070.1| hypothetical protein BpinB_03136 [Brucella pinnipedialis B2/94]
gi|254716328|ref|ZP_05178139.1| hypothetical protein BcetM_07820 [Brucella ceti M13/05/1]
gi|256158803|ref|ZP_05456664.1| hypothetical protein BcetM4_07968 [Brucella ceti M490/95/1]
gi|261218109|ref|ZP_05932390.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261221336|ref|ZP_05935617.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261314677|ref|ZP_05953874.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316765|ref|ZP_05955962.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321044|ref|ZP_05960241.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261751433|ref|ZP_05995142.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261759222|ref|ZP_06002931.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265987836|ref|ZP_06100393.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265997296|ref|ZP_06109853.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|294851511|ref|ZP_06792184.1| hypothetical protein BAZG_00416 [Brucella sp. NVSL 07-0026]
gi|148371757|gb|ABQ61736.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|260919920|gb|EEX86573.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260923198|gb|EEX89766.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293734|gb|EEX97230.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261295988|gb|EEX99484.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303703|gb|EEY07200.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261739206|gb|EEY27202.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261741186|gb|EEY29112.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|262551764|gb|EEZ07754.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264660033|gb|EEZ30294.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|294820100|gb|EFG37099.1| hypothetical protein BAZG_00416 [Brucella sp. NVSL 07-0026]
Length = 263
Score = 144 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 5 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 64 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAARFYHECQSSGVSCTFITTG 121
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 122 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL S S +F +LAL E IG
Sbjct: 182 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 238
>gi|239787465|emb|CAX83936.1| conserved uncharacterized protein [uncultured bacterium]
Length = 258
Score = 144 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 48/244 (19%), Positives = 93/244 (38%), Gaps = 22/244 (9%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+ LIV +W L R + + +++F I ++ + + ++ P L+P
Sbjct: 20 LLALIVVWWWLPRSPHRARWLLGLIIVIFYGITLPVVGNLSMATVES---IPPLTPAQIA 76
Query: 65 DGNII--VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
V+LG+G + +RI L++ I+ SGG
Sbjct: 77 ATQAQAIVILGHGRYPAAPEYDGADTVNTGGLARIRYGAWLHRR-----TGLPILTSGGK 131
Query: 123 PQKHGLAESIVYNNKL-LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P + +E+ + L E GV E S +T +NA+ + ++ +++LV+
Sbjct: 132 PFQEKESEAQLMKRALEKEFGVPVR--WTEDSSDNTLENARNTQKILAAQGIDHVLLVTH 189
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLS-ANFYLTELALKEYIGILI 235
H+ R+ F G+ + + + +PLS ++ L EY+G L
Sbjct: 190 GNHMVRALQTFHQAGLKITPAPTLFQTPTPNAGILDWLPLSCRGVWVP---LHEYVGRLW 246
Query: 236 AYYR 239
R
Sbjct: 247 YQLR 250
>gi|17988125|ref|NP_540759.1| hypothetical protein BMEI1842 [Brucella melitensis bv. 1 str. 16M]
gi|256045898|ref|ZP_05448772.1| hypothetical protein Bmelb1R_15424 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256112611|ref|ZP_05453532.1| hypothetical protein Bmelb3E_08010 [Brucella melitensis bv. 3 str.
Ether]
gi|256264843|ref|ZP_05467375.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260563183|ref|ZP_05833669.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265992310|ref|ZP_06104867.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994051|ref|ZP_06106608.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17983881|gb|AAL53023.1| putative membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|260153199|gb|EEW88291.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|262765032|gb|EEZ10953.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263003376|gb|EEZ15669.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263095299|gb|EEZ18926.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|326408125|gb|ADZ65190.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326537837|gb|ADZ86052.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 263
Score = 144 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 5 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 64 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAARFYHECQSSGVSCTFITTG 121
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 122 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL S S +F +LAL E IG
Sbjct: 182 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 238
>gi|257869611|ref|ZP_05649264.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
gi|257803775|gb|EEV32597.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
Length = 356
Score = 144 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 102/242 (42%), Gaps = 30/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L+ + + S+ H L + +F + LL+ F+ + L L S P
Sbjct: 117 IVLTILLVSDSFLHALPSWVSVLFTIFPASLLYFFV-------VFLNFLSISVIYQFNHP 169
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIIS 119
++ D + I++LG G + ++ P RI + + Y + ++S
Sbjct: 170 RY--DQDFIIVLGAGL-----LNGEKVSPLL--AQRIDKAIAFYHLQFRAKKTAPRFLMS 220
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NII 177
GG + E++ + G+ +I +E S T++N +FS ++ +++ + + I
Sbjct: 221 GGQGSDEKIPEAVAMKEYAVSQGIPESEILVEANSTTTYENMKFSKEIMDSLRPEGYHAI 280
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
VS+ YH+ R+ +Y + S +A +YL L+EYI IL +
Sbjct: 281 FVSNNYHIFRAGMYADQVHVKADGIGSH-----------TAFYYLPNAFLREYIAILFMH 329
Query: 238 YR 239
+
Sbjct: 330 KK 331
>gi|261755996|ref|ZP_05999705.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261745749|gb|EEY33675.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 263
Score = 144 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 5 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMSRLQEPYSSKLAEP 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 64 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAARFYHECQSSGVSCTFITTG 121
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 122 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL S S +F +LAL E IG
Sbjct: 182 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 238
>gi|289209654|ref|YP_003461720.1| hypothetical protein TK90_2494 [Thioalkalivibrio sp. K90mix]
gi|288945285|gb|ADC72984.1| protein of unknown function DUF218 [Thioalkalivibrio sp. K90mix]
Length = 215
Score = 144 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 85/220 (38%), Gaps = 17/220 (7%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ +LL + + L+K LQ + P + D IV+LG G +
Sbjct: 2 LLVIGLLLSYSLSTPVFSYALMKPLQEGFAPPDDN--QLADAQAIVVLGAGYRSGAEEFS 59
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ R+ Y + H +++SGG P+ + E+ L E GV
Sbjct: 60 GETVHDL-ALVRLR-----YAAYLHHRTGLPVMVSGGGPE-ERVPEADYMAEVLKEYGVH 112
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
I E + DT+ NA+ S+ + + + LVS A+H+ R+ F+ G+ + +
Sbjct: 113 P--ILREPNARDTWGNARHSAEQLHAEGIERVALVSHAHHMPRATWSFERAGLEIIPAPT 170
Query: 205 DYLNAY------YSIIPLSANFYLTELALKEYIGILIAYY 238
P ++ + + LAL EY G+ +
Sbjct: 171 GAYVPRDNGWSLEGFRPQASAVWASWLALHEYWGMAWYRW 210
>gi|90407003|ref|ZP_01215193.1| putative membrane protein [Psychromonas sp. CNPT3]
gi|90311874|gb|EAS39969.1| putative membrane protein [Psychromonas sp. CNPT3]
Length = 267
Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 23/246 (9%)
Query: 1 MLLSWIF-----LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR 55
M L + F ++ + Q + K + F+ LF + ++ L+
Sbjct: 15 MPLPFFFCLFLMALILLFFTKKQKMAKFLLIVSFVFLFVA-SYRPFSASFVQTLERE-NV 72
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
+L +D + I+LLG+ T T+P I + S + SR E +RLY++ + + T
Sbjct: 73 AMLETDTAQDLDYILLLGSSGTFDATLP-ITGQLSATALSRFIEALRLYQA----NPNAT 127
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I+SGG + + + L+ + + I ++ DT +I+ GK
Sbjct: 128 LIVSGGSFGDEK-SHAQLLEELALQFAIPLNHIIRIDEAKDTDDEIAAMQKIIR---GKK 183
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY-------YSIIPLSANFYLTELALK 228
LV+SA H+ R+ F+ G++ + + YL Y Y +P S T +A
Sbjct: 184 AALVTSATHMPRALSLFKAQGLSPIPAPAHYLAPYSKTVLPSYRKLPSSLALRHTTIAWH 243
Query: 229 EYIGIL 234
EY+G L
Sbjct: 244 EYLGAL 249
>gi|39936223|ref|NP_948499.1| hypothetical protein RPA3160 [Rhodopseudomonas palustris CGA009]
gi|39650078|emb|CAE28601.1| DUF218 [Rhodopseudomonas palustris CGA009]
Length = 264
Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 18/245 (7%)
Query: 6 IFLIVSYWHLLCQSIRK-IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+ + +L + R + ++L G+ + +LL L + P +
Sbjct: 21 MICVAGLVLMLTRWWRAGRALLIGGVVLLLIAGYSPLGNVLLLSLSERF--PPWHEAGRA 78
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQS-YSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
IIVL G I + A R + R+ + L + + I+ SGG
Sbjct: 79 PDGIIVLGGA---IASELSAARNALEVDASAERVLAALDLARRYPK----ARIVYSGGSG 131
Query: 124 Q--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ +AE+ + L G+ D + LE +S T +NA ++ +++ G+ +LV+S
Sbjct: 132 NLIQRSVAEAPLAGELLERFGLASDRLVLEDKSRTTAENAAYTRALVAPKPGELWLLVTS 191
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIA 236
A+H+ RS + F+ G + D+ A + L+A T++A+ E+ G+L
Sbjct: 192 AFHMPRSIIAFRAAGFDVVPYPVDWRTRGSEDAARTFSTLAAGLARTDVAVHEWAGLLAY 251
Query: 237 YYRGN 241
G
Sbjct: 252 RLGGK 256
>gi|226943043|ref|YP_002798116.1| hypothetical protein Avin_09020 [Azotobacter vinelandii DJ]
gi|226717970|gb|ACO77141.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
Length = 253
Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 41/228 (17%), Positives = 89/228 (39%), Gaps = 16/228 (7%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPT---ILLKHLQFSYQRPLLS-PQWKKDGNIIVLLG 73
+ +CF L + +P L + ++ P+ + IV+LG
Sbjct: 28 RQRAPRLAAACFTLGAGGLWLLSLPVTVEWLARAIEREPALAEAQWPRLAQRAEAIVVLG 87
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G +PS + R+ RL ++ ++ SGG +E+ +
Sbjct: 88 GGRERGDPAWGG-DQPSPLALERLRYAARLARAS-----GLPLLASGGLHFGAPPSEAAL 141
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L + + E +S T++NA++S+ +++ + ++LV+ A+H+ R++ F+
Sbjct: 142 LGEVLEKDHGLQLR-WREERSRTTWENARYSAELLQAEGIRRVVLVTQAWHMPRARWCFE 200
Query: 194 HFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
G + + + +L +P + + L L E +G L
Sbjct: 201 RAGFSVLPAPAGFLGVPNGRPLGGWLPEGRALWQSGLLLNEALGRLAY 248
>gi|320540492|ref|ZP_08040142.1| conserved inner membrane protein [Serratia symbiotica str. Tucson]
gi|320029423|gb|EFW11452.1| conserved inner membrane protein [Serratia symbiotica str. Tucson]
Length = 264
Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 19/207 (9%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
+ LL+ ++ YQ + N IV+LG T P A S R+ E
Sbjct: 58 PVADRLLRPIESEYQTY----RGHDPVNYIVVLGGSYTFNPD-WAPSSNLIGNSLPRVTE 112
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+RLY ++ +G + L+ + GV DI + LDT Q
Sbjct: 113 GVRLY----LTHPGAKLVFTGARGV-NTLSNAATAARVTESLGVPSRDILRLDRPLDTEQ 167
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSI 213
A ++++ + ILV+SA H+ R+ +F+ G++ + ++ LN + +
Sbjct: 168 EAGQVAALV---GNQPFILVTSACHMPRAMRFFKAKGLHPIPAPANQLAISSPLNTWQRV 224
Query: 214 IPLSANFYLTELALKEYIGILIAYYRG 240
+P S +E A E +G L G
Sbjct: 225 MPSSMFLSHSEHAWYETLGSLWQRLTG 251
>gi|152993138|ref|YP_001358859.1| hypothetical protein SUN_1551 [Sulfurovum sp. NBC37-1]
gi|151424999|dbj|BAF72502.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 248
Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 52/244 (21%), Positives = 99/244 (40%), Gaps = 16/244 (6%)
Query: 2 LLSWIFLIVSYWHLLCQS-IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ +F+ ++ + + F +L + + ++LL L+ + L+
Sbjct: 16 PIFLLFMAFGFYFFSQKRYVGSKRFFLVGILWIILLSYAPFSSLLLLPLERQFSSVDLN- 74
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I +LG IP + E +R+ E + LYK K ++ SG
Sbjct: 75 --GTNAGYIHVLGTAHVAREGIP-LSSELDPSGLARVTEGVLLYKQHK----GMKLVFSG 127
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ L+ + GV +DI + DT + A S M QGK+++LV+
Sbjct: 128 Y-GKDEPLSNAKCSAALAQALGVREEDIIVFETPKDTLEEAGAMSEM---AQGKHVVLVT 183
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI---IPLSANFYLTELALKEYIGILIAY 237
SA H+ R+ F+ GI + +D+ +P + +E A EY+G+L +
Sbjct: 184 SASHMLRASRLFKKAGIKVIEAPTDFKVKKPDDLLQLPGAEGLRRSETAFHEYLGLLWFW 243
Query: 238 YRGN 241
+G+
Sbjct: 244 LKGD 247
>gi|257883084|ref|ZP_05662737.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
gi|257818742|gb|EEV46070.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
Length = 368
Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 30/227 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L Q I +FF +L++ FI + L + + RP + + + IV+LG G
Sbjct: 146 LPQWINALFFCVPLILIYLFI---VFYNFLTVSFLYQFNRP------RYNQDFIVVLGAG 196
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVY 134
T+ S RI + + Y++ + +++ I++ SGG + E+I
Sbjct: 197 LINGETV-------SPLLAKRINKAIAFYRAQSRATLNPPILLMSGGQGADEKVPEAIAM 249
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYF 192
+E G+ DI +ET S T +N +S ++ I S+ YH+ R+ LY
Sbjct: 250 KQYAMEQGIPERDILVETNSTTTLENMLYSKEIMDQQMKGPYRAIFSSNNYHIFRAGLYA 309
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + +A +YL L+EYI IL+ +
Sbjct: 310 WQAKLKANGIGA-----------KTAFYYLPNAFLREYIAILMMNKK 345
>gi|165976456|ref|YP_001652049.1| hypothetical protein APJL_1049 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|307257077|ref|ZP_07538852.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|165876557|gb|ABY69605.1| hypothetical protein APJL_1049 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|306864448|gb|EFM96356.1| Molybdate ABC transporter permease protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 246
Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 28/247 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + W+F ++ YW L + + F+ L + T L L L+
Sbjct: 18 IAVIWLFSLICYWLNLKKISYSLAFLGIGSL--YLFSTPYVATKLTDSL---VTEDNLAL 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K IV+LG G I ++ E MR Y + Q ++I+G
Sbjct: 73 EDYKKAQAIVVLGGGVRDSKEI-----YNPIVVGNQALERMR-YAAYLQKETQLPLLITG 126
Query: 121 GDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
P +G +E+ N+ V LE ++ T +NAQFS ++ IILV
Sbjct: 127 SSP--NGTSEAKTMANEFQYFFSVPTQ--WLEEKAKTTKENAQFSRELLAKEGINKIILV 182
Query: 180 SSAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++ +H+KR+++ F+ G + ++Y+N + IP S L+LKE++G
Sbjct: 183 TNQWHMKRAKMLFEKQGFEVLPASIGHGVTPAEYIN-FAYFIPQSGAMDSIMLSLKEWLG 241
Query: 233 ILIAYYR 239
Y++
Sbjct: 242 ----YWK 244
>gi|71906187|ref|YP_283774.1| hypothetical protein Daro_0547 [Dechloromonas aromatica RCB]
gi|71845808|gb|AAZ45304.1| Protein of unknown function DUF218 [Dechloromonas aromatica RCB]
Length = 252
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 18/233 (7%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
++ L + LL ++ L+ L+ L Q G +I
Sbjct: 25 MAIAGLGRRRRWAFSLAFLGALLLLLQSLPLVGAGLMGTLERRAGPVL---QDAAGGQVI 81
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG+G + + R R Y + +++SGG P +
Sbjct: 82 VVLGSGLELNAEEYG-----GDTATDRTLLRTR-YGATLARRFDLPVLVSGGRPVNATRS 135
Query: 130 ESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ V + L E V E QS+DT QNA S++++K + I+LV+ A+H+ R+
Sbjct: 136 EAEVMADILENEFKVPVR--WREMQSMDTIQNAALSAAILKKSGVRRIVLVTQAFHMPRA 193
Query: 189 QLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGILI 235
F+ G+ + + + I+P ++ + + AL E++GI+
Sbjct: 194 VRLFRAAGLEVIPAPTHFKTGGVGTIGVADILPSASALHNSFYALHEWLGIVW 246
>gi|313624306|gb|EFR94349.1| integral membrane protein [Listeria innocua FSL J1-023]
Length = 344
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 106/239 (44%), Gaps = 25/239 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L + L + ++ + ++ I M + L +F+G+ + F YQ
Sbjct: 105 LVIVILFIFWFGSILKNGSPILGMVV-VFLMAFVGYFSFLFLSFLLSTFLYQFNF----P 159
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGG 121
+ + + +++LG+G +P + SR+ + Y K + T I+SGG
Sbjct: 160 RYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIAFYEKQYDKKGKRATFIVSGG 212
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVS 180
++E+ + L+ G++ + I +E +S++T QN QFS + + M N + +
Sbjct: 213 QGANETVSEAKAMRDYLISKGIDENFIIMEDKSVNTLQNMQFSKAKMDAIMPTYNSLFST 272
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL R+ LY + G+ ++ + +A +Y+ ++E+I I + Y +
Sbjct: 273 NNFHLFRAGLYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMYKK 320
>gi|258404265|ref|YP_003197007.1| hypothetical protein Dret_0127 [Desulfohalobium retbaense DSM 5692]
gi|257796492|gb|ACV67429.1| protein of unknown function DUF218 [Desulfohalobium retbaense DSM
5692]
Length = 258
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 48/246 (19%), Positives = 106/246 (43%), Gaps = 18/246 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L++ + ++ + ++ R + +LL S +P ++ L+ + ++
Sbjct: 21 LLVAGLVILFGF-RRWQRTGRWLVLAGTAVLLVSTT--PAVPQWAMRTLEGRFPAIDMTA 77
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D +V+LG G P +P + + + R+ E +R+ + T+++SG
Sbjct: 78 AKAADAQWVVVLGGGHASDPGLP-VSAKVGTSTMYRLVEGVRIVRQL----PGATLLLSG 132
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
K ++ + + + G + LE + DT Q A + + + + +LV+
Sbjct: 133 YAG-KEAVSNARIKADLAKALGY-EGPLVLEERPRDTAQEA---AMITERLGQAPFVLVT 187
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGILI 235
SA H+ R+ FQ G + A+ + +L + P + + Y + A+ EY+G+
Sbjct: 188 SASHMPRAMALFQGQGSHPIAAPTGHLAPREALQAWDWFPNAQDAYCLQRAVYEYLGLGW 247
Query: 236 AYYRGN 241
A+ RG
Sbjct: 248 AWLRGQ 253
>gi|256060248|ref|ZP_05450424.1| hypothetical protein Bneo5_07795 [Brucella neotomae 5K33]
Length = 272
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 14 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP Y IF R Y C+ + CT I +G
Sbjct: 73 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFFYGSIFAAARFYHECQSSGVSCTFITTG 130
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 131 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 190
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL S S +F +LAL E IG
Sbjct: 191 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 247
>gi|82701477|ref|YP_411043.1| hypothetical protein Nmul_A0343 [Nitrosospira multiformis ATCC
25196]
gi|82409542|gb|ABB73651.1| Protein of unknown function DUF218 [Nitrosospira multiformis ATCC
25196]
Length = 251
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 80/207 (38%), Gaps = 17/207 (8%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
I+ LL+ L+ P + I++LG GT + R
Sbjct: 52 STPIVADALLQVLE----TPSEKNPFDDTIQAIIVLGGGTYYYAPEYGDHTV-GRYTLER 106
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG-VERDDIKLETQSL 155
+ ++Y+ I+ +GG P + +E++ L E V + +E S
Sbjct: 107 VRYAAKIYR-----LTGKPILTAGGAPLGNHSSEAMQMKAVLEEEFLVPVE--WVEETSS 159
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY----Y 211
+T +NA S ++++ + I LV+ A+H+ R+ F+ G + + Y Y
Sbjct: 160 NTRENAYKSFAILQKQGIRQIALVTHAWHMPRAAREFEQAGFEVTPAATGYTRRYKTDLL 219
Query: 212 SIIPLSANFYLTELALKEYIGILIAYY 238
+ IP + + L E IGIL
Sbjct: 220 TFIPNAGALLKSSLFFHEVIGILWYRL 246
>gi|114319324|ref|YP_741007.1| hypothetical protein Mlg_0162 [Alkalilimnicola ehrlichii MLHE-1]
gi|114225718|gb|ABI55517.1| protein of unknown function DUF218 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 247
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 86/209 (41%), Gaps = 18/209 (8%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
+ L+ LQ P + P +D IV+LG G + + R+
Sbjct: 50 PVGYALMDGLQADC--PPVQPAQLRDAQAIVVLGAGYRSGADEFSGETVNDL-ALVRLRY 106
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
L++ +I SGG E+ L E GV+ I E+++ DT+
Sbjct: 107 AAYLHR-----ETGLPVIASGGAATDR-EPEARWMAEVLAEFGVDP--ILTESEARDTWG 158
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS------DYLNAYYSI 213
NAQ ++ ++ + LVS A+H+ R+ F+ G+ + + D ++ +
Sbjct: 159 NAQHTAELLARQGLSRVALVSHAHHMPRAVWAFEQAGVTVLPAPTGAFVPHDRGWSWGML 218
Query: 214 IPLSANFYLTELALKEYIGILIA-YYRGN 241
P + ++ LA+ EY+G+ + RG+
Sbjct: 219 RPQANALRMSWLAMHEYLGLFWYRWMRGD 247
>gi|307721211|ref|YP_003892351.1| hypothetical protein Saut_1291 [Sulfurimonas autotrophica DSM
16294]
gi|306979304|gb|ADN09339.1| protein of unknown function DUF218 [Sulfurimonas autotrophica DSM
16294]
Length = 248
Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 105/241 (43%), Gaps = 16/241 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ +F I + + + +S + L + L+++L+ Y +
Sbjct: 20 LVVTLFAIGLFLLHVKRVRAAKIMLSLGLFLLLLFSYPPFTNFLVQNLENQYPKF----D 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ ++ I +LGNG + P S R+ E + ++K II +G
Sbjct: 76 YTQNVKYIHVLGNGHNTDKSQPISSQISSG-GTKRVLEGVIIHKRM----PGSKIIFTGY 130
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ K +++ G++ +D+ + + DT + A F+ +++ ++ ILV+S
Sbjct: 131 EG-KTDTPNAVMNAKLANALGIKYEDMIINGKPTDTKEEALFTKTLV---GNESFILVTS 186
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYS---IIPLSANFYLTELALKEYIGILIAYY 238
A H+ R+ + F G++ + ++Y + + P F+++ +A+ EY+GIL A
Sbjct: 187 ATHMPRAMMLFTSLGMHPIPAPTNYYKSEFRGYLRAPDPGCFFISSIAIHEYLGILWAKL 246
Query: 239 R 239
+
Sbjct: 247 K 247
>gi|261324222|ref|ZP_05963419.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261300202|gb|EEY03699.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 263
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 5 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP Y IF R Y C+ + CT I +G
Sbjct: 64 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFFYGSIFAAARFYHECQSSGVSCTFITTG 121
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 122 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL S S +F +LAL E IG
Sbjct: 182 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 238
>gi|294085382|ref|YP_003552142.1| hypothetical protein SAR116_1815 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664957|gb|ADE40058.1| DUF218 [Candidatus Puniceispirillum marinum IMCC1322]
Length = 264
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 52/236 (22%), Positives = 95/236 (40%), Gaps = 16/236 (6%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L F ++L G+ + I L+ L+ + P+L + + I++LG
Sbjct: 30 RLFKNRRWARMFTIVAVILPLLYGFIPLSHIPLQFLENRFDVPILE---GRPLDGIIILG 86
Query: 74 NGTTIIPTIPAIRIEPSFQSYS-RIFETMRLYKSCKQHSMHCTIIISG--GDPQKHGLAE 130
G T I R +P + + R + L++ I+ SG G+ G +E
Sbjct: 87 -GHTGNGEISEGRGQPQLSAAAERFTTALHLHRQF----PDLPILFSGFSGELMPKGWSE 141
Query: 131 SIVYNNKLLESGVERD-DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+ L E G+ +I E+ S +T++NA +S +++ G +LV+SA H+ R+
Sbjct: 142 TQTIKRLLDELGMAESPNILFESTSRNTYENALYSETVLSPQPGSFWVLVTSASHMPRAV 201
Query: 190 LYFQHFGI-NTKASCSDYLN---AYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
F++ G DY + I L + + EY G+ + G
Sbjct: 202 GSFRNAGWGGVIPYPVDYQTLPSGFPYIWNLPRGLHTMTIVFHEYAGLFAYWLSGK 257
>gi|62289087|ref|YP_220880.1| hypothetical protein BruAb1_0103 [Brucella abortus bv. 1 str.
9-941]
gi|82699025|ref|YP_413599.1| hypothetical protein BAB1_0103 [Brucella melitensis biovar Abortus
2308]
gi|237814579|ref|ZP_04593577.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254696534|ref|ZP_05158362.1| hypothetical protein Babob28_02155 [Brucella abortus bv. 2 str.
86/8/59]
gi|256258668|ref|ZP_05464204.1| hypothetical protein Babob9C_15246 [Brucella abortus bv. 9 str.
C68]
gi|297247504|ref|ZP_06931222.1| hypothetical protein BAYG_00411 [Brucella abortus bv. 5 str. B3196]
gi|62195219|gb|AAX73519.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615126|emb|CAJ10059.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|237789416|gb|EEP63626.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|297174673|gb|EFH34020.1| hypothetical protein BAYG_00411 [Brucella abortus bv. 5 str. B3196]
Length = 272
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 14 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP S IF R Y C+ + CT I +G
Sbjct: 73 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSDGSIFAAARFYHECQSSGVSCTFITTG 130
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 131 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 190
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL S S +F +LAL E IG
Sbjct: 191 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 247
>gi|117921230|ref|YP_870422.1| hypothetical protein Shewana3_2789 [Shewanella sp. ANA-3]
gi|117613562|gb|ABK49016.1| protein of unknown function DUF218 [Shewanella sp. ANA-3]
Length = 244
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 52/241 (21%), Positives = 103/241 (42%), Gaps = 13/241 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIR-KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
M + +I L++ L+ + R + + L + + L+K L+ Y ++
Sbjct: 13 MPIPFILLLLLLSLLIWRKPRLAKWAIGGVFTLLLVLSSQLSVDYLVKPLEAQYP---IN 69
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
++++LG+ + IP A++ S + +R+ E +R K CT+++S
Sbjct: 70 STPFAGTCVVMVLGSAHSDIPGATAVQ-SLSTVALARLTEGLRQLK----LGQDCTLVVS 124
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + + + V +E GV+ I DT + A + + + + LV
Sbjct: 125 GWEGELTQHPHAEVMAKAAVELGVDATRIVQLPLPRDTIEEAHYFKE---HFGDQAVRLV 181
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA-NFYLTELALKEYIGILIAYY 238
+SA H+ RS F G+ A+ +D+ L+A N ++ A+ EYIG L +
Sbjct: 182 TSASHMPRSMAIFSGQGLTASAAPTDFRARDGFYWRLTADNLLASQRAIHEYIGRLWLWI 241
Query: 239 R 239
+
Sbjct: 242 K 242
>gi|116872406|ref|YP_849187.1| hypothetical protein lwe0988 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741284|emb|CAK20406.1| putative membrane protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 344
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 45/241 (18%), Positives = 108/241 (44%), Gaps = 25/241 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L + LI+ ++ + ++ I ++ + + + +G+ + F YQ
Sbjct: 105 LGILVLIIMWFGSILKTGSPILGLAI-VFVVALVGYFSFLFLSFLLSTFLYQFNF----P 159
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGG 121
+ + + +++LG+G +P + SR+ ++ + K + T I+SGG
Sbjct: 160 RYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIKFHEKQYLKKGKRATFIVSGG 212
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILVS 180
++E+ L+E G++ + I +E +S++T QN +FS + M N + +
Sbjct: 213 QGANETISEAEAMRAYLIEKGIDENFIIMEDKSVNTLQNMKFSKEKMDAIMPTYNSLFAT 272
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +HL R+ +Y + G+ ++ + +A +Y+ ++E+I I + Y +
Sbjct: 273 NNFHLFRAGIYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMYKKA 321
Query: 241 N 241
+
Sbjct: 322 H 322
>gi|87301698|ref|ZP_01084538.1| hypothetical protein WH5701_03449 [Synechococcus sp. WH 5701]
gi|87283915|gb|EAQ75869.1| hypothetical protein WH5701_03449 [Synechococcus sp. WH 5701]
Length = 266
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 24/240 (10%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + + + L+ L+ R L+P G+ IV+LG G
Sbjct: 32 RRRWSGPLGGLGLAMLWISAMPLTARELVWGLEARSAR--LTPAPVPRGDAIVVLGGGLR 89
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC---TIIISGGDPQKHGLAESIVY 134
+P ++ R+ +RL + + + + SGGDP AE+I
Sbjct: 90 --AALPPRAGVEVNEAGDRLLSGIRLLRDQRAPLLLLSGGRVSFSGGDP---APAEAISA 144
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ LE GV D + + Q+ T + A+ + ++ ++LV+SA H+ R+ F+
Sbjct: 145 RSLALELGVPADRLLVSDQARTTAEEARDLRRIGQSRGWSTVLLVTSALHMPRALASFRR 204
Query: 195 F-GINTKASCSDYLNA-------------YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G+ DYL S+ P + + L+ LA+KE++G+L+ RG
Sbjct: 205 QSGLQVVPVACDYLLPARDQLGRPTAGSVLLSLWPDAGSLLLSSLAIKEHLGLLVYRLRG 264
>gi|189023362|ref|YP_001934130.1| hypothetical protein BAbS19_I00980 [Brucella abortus S19]
gi|254690416|ref|ZP_05153670.1| hypothetical protein Babob68_09644 [Brucella abortus bv. 6 str.
870]
gi|254694904|ref|ZP_05156732.1| hypothetical protein Babob3T_09632 [Brucella abortus bv. 3 str.
Tulya]
gi|254731447|ref|ZP_05190025.1| hypothetical protein Babob42_09674 [Brucella abortus bv. 4 str.
292]
gi|260546384|ref|ZP_05822124.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260755963|ref|ZP_05868311.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260759187|ref|ZP_05871535.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260760911|ref|ZP_05873254.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884984|ref|ZP_05896598.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261215238|ref|ZP_05929519.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|189018934|gb|ACD71656.1| hypothetical protein BAbS19_I00980 [Brucella abortus S19]
gi|260096491|gb|EEW80367.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260669505|gb|EEX56445.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671343|gb|EEX58164.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260676071|gb|EEX62892.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260874512|gb|EEX81581.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260916845|gb|EEX83706.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
Length = 263
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 5 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP S IF R Y C+ + CT I +G
Sbjct: 64 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSDGSIFAAARFYHECQSSGVSCTFITTG 121
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 122 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL S S +F +LAL E IG
Sbjct: 182 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 238
>gi|270291245|ref|ZP_06197467.1| hypothetical protein HMPREF9024_01427 [Pediococcus acidilactici
7_4]
gi|270280091|gb|EFA25927.1| hypothetical protein HMPREF9024_01427 [Pediococcus acidilactici
7_4]
Length = 342
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 55/245 (22%), Positives = 97/245 (39%), Gaps = 32/245 (13%)
Query: 3 LSWIF---LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLK-HLQFSYQRPLL 58
LS IF L++ + + +L FIG + T + +L +S+ ++
Sbjct: 99 LSLIFRINLLLVLVAGATILLASQYLGRLTGVLLVFIGIDVTFTFIFSCYLFYSFLYQII 158
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ K N I+ LG G P ++ R+ + + + + I+
Sbjct: 159 PIREKV--NYIITLGAGIRSETVTPLLK--------GRLDKALEYFWKQD---GNPKFIV 205
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI----KNMQGK 174
SGG ++E+ L V D I LE QS T QN +FS I K
Sbjct: 206 SGGQGPDEPVSEAYAMAKYLKSQHVPEDKIILEDQSTTTLQNMKFSKQKIEKDWKKSGVP 265
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+I ++ YH+ RS +Y + G+N S ++ ++L ++EYI +L
Sbjct: 266 KVIFATNNYHVLRSAIYARKAGLNANGVGSP-----------TSFYFLPSALIREYIALL 314
Query: 235 IAYYR 239
+ Y +
Sbjct: 315 VIYKK 319
>gi|113970950|ref|YP_734743.1| hypothetical protein Shewmr4_2615 [Shewanella sp. MR-4]
gi|113885634|gb|ABI39686.1| protein of unknown function DUF218 [Shewanella sp. MR-4]
Length = 244
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 95/228 (41%), Gaps = 12/228 (5%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
+ + + + + L + + L+K L+ Y ++ ++++L
Sbjct: 26 FWVWRKPRLAKWAIGGAFSLLLVLSSQLSVDYLVKPLETQYP---INSTPIAGTCVVMVL 82
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G+ + IP A++ S + +R+ E +R Q CT+++SG + + +
Sbjct: 83 GSAHSDIPGATAVQ-SLSAVALARLTEGLR----QLQLGQDCTLVVSGWEGELTQHPHAE 137
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V +E GV+ I DT + A + + + + LV+SA H+ RS F
Sbjct: 138 VMAKAAVELGVDASRIVQLPLPRDTIEEAHYFKE---HFGNQAVRLVTSASHMPRSMAIF 194
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSA-NFYLTELALKEYIGILIAYYR 239
G+ A+ +D+ L+A N ++ A+ EYIG L + +
Sbjct: 195 SGQGLTASAAPTDFRARDGFYWRLTADNLLASQRAIHEYIGRLWLWIK 242
>gi|114562500|ref|YP_750013.1| hypothetical protein Sfri_1322 [Shewanella frigidimarina NCIMB 400]
gi|114333793|gb|ABI71175.1| protein of unknown function DUF218 [Shewanella frigidimarina NCIMB
400]
Length = 252
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 44/245 (17%), Positives = 104/245 (42%), Gaps = 16/245 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFF----MSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
+ S + L+++ I+ + F + +++ + + L L+ +
Sbjct: 15 IPFSIMLLVLAAVLWRTNRIKLLQFGRMLLVSAIVVLTLTSQSQVSYFLANSLESQHN-- 72
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
++ Q ++++LG+G + A++ + S + +R+ E +R ++ CT+
Sbjct: 73 -VNHQPIAGSCVVMVLGSGNSEQQGHTAVQ-QLSSTALARLTEGVRQFR----LGQQCTL 126
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I+SG A + + E G+ + I + DT + A +I +
Sbjct: 127 IVSGWSGGYLKTAHATIMAQAAEELGIPKASIVAFNEPKDTIEEAHALQQLI---GLQPF 183
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL-SANFYLTELALKEYIGILI 235
LV+SA H+ R+ + F G+ + + SD++ L + ++ ++ EY+G+L
Sbjct: 184 RLVTSATHMPRAMMIFTSLGMQPQPAPSDFIAHQGFWWRLDADQLLASQKSIHEYVGMLW 243
Query: 236 AYYRG 240
+ +G
Sbjct: 244 LHIKG 248
>gi|167947128|ref|ZP_02534202.1| probable transmembrane protein [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 250
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 54/246 (21%), Positives = 102/246 (41%), Gaps = 22/246 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LL ++ L+ YW R++F +LL I +L + L+ +
Sbjct: 20 ILLGFLGLL--YWRF--GYGRRVF--VFALLLLWVTSLPITADLLAQGLEI-HPALSEER 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG G + S + R+ +L + +I SG
Sbjct: 73 LAESHPEAIIVLGGGRNLDAPEYGG-DTVSARELERLRYAAKLARQ-----TGLPVIPSG 126
Query: 121 GDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G P G E+ + L E GV I E S T+ NA+ S+ ++K + K ++LV
Sbjct: 127 GAPIYFGEPEAKIAARILQDEFGVSVSQI--EAASNTTWDNARLSAQLLKKLGIKQVLLV 184
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGI 233
++A H++R+ F+ G+ A+ + + + + +P A+ EY+G+
Sbjct: 185 TNALHMRRAIYAFERNGVEVIAAPTSFIHKTNTRHVWLEGLPNGLAVKNVAYAMHEYVGL 244
Query: 234 LIAYYR 239
L Y++
Sbjct: 245 LWYYFK 250
>gi|161618094|ref|YP_001591981.1| hypothetical protein BCAN_A0109 [Brucella canis ATCC 23365]
gi|161334905|gb|ABX61210.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
Length = 272
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 14 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMSRLQEPYSSKLAEP 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF Y C+ + CT I +G
Sbjct: 73 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAAHFYHECQSSGVSCTFITTG 130
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 131 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 190
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL S S +F +LAL E IG
Sbjct: 191 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 247
>gi|290893441|ref|ZP_06556425.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|290556942|gb|EFD90472.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
Length = 344
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 106/239 (44%), Gaps = 25/239 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L I L ++++ + ++ I + + + +F+G+ + F YQ
Sbjct: 105 LVIIILFIAWFGSILKNGSPILGVVV-LFVMAFVGYFSFLFLSFLLSTFLYQFNF----P 159
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGG 121
+ + + +++LG+G +P + SR+ + Y K + T I+SGG
Sbjct: 160 RYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIAFYEKQYSKTGKRATFIVSGG 212
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVS 180
++E+ + L+ G++ I +E QS++T QN QFS + + + N + +
Sbjct: 213 QGANETVSEAQAMRDYLISKGIDETFIIMEDQSVNTLQNMQFSKAKMDAIMPDYNSLFST 272
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL R+ LY + G+ ++ + +A +Y+ ++E+I I + Y +
Sbjct: 273 NNFHLFRAGLYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMYKK 320
>gi|310829787|ref|YP_003962144.1| integral membrane protein [Eubacterium limosum KIST612]
gi|308741521|gb|ADO39181.1| integral membrane protein [Eubacterium limosum KIST612]
Length = 403
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 47/244 (19%), Positives = 102/244 (41%), Gaps = 31/244 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LL + ++S+ ++ + + + +L + + +L + RP+L
Sbjct: 156 ILLWLVLGMLSFKNVEINDVLSVIMLVVNTILLYLL--LVFSNFILSSFIYGIYRPVL-- 211
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIIS 119
+ I++LG+G + ++ P RI +++Y+ +I+S
Sbjct: 212 ----RQDYIIVLGSGL-----MGGNKVTPLL--AGRIDRALKVYRRQADKKKSPPMLIMS 260
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK----N 175
GG +AE LE G+ D I +E QS +T++N FS +I++ +
Sbjct: 261 GGQGGDEQIAEGEAMKQYALEQGIPEDHILVEDQSKNTYENMLFSRQLIESREADMKHLR 320
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I+ +S YH+ R+ +Y + G+ + + + ++ L+EY+ IL
Sbjct: 321 ILFSTSNYHVFRAGIYARKAGLKAQGIGA-----------KTKFYFWYNALLREYVAILA 369
Query: 236 AYYR 239
+ +
Sbjct: 370 MHKK 373
>gi|322514156|ref|ZP_08067222.1| hypothetical protein HMPREF0027_0974 [Actinobacillus ureae ATCC
25976]
gi|322119969|gb|EFX91970.1| hypothetical protein HMPREF0027_0974 [Actinobacillus ureae ATCC
25976]
Length = 248
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 19/244 (7%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ WIF + + +S +F + + +I + + +Q L+ +
Sbjct: 19 LILWIFSLFLHKLHFKKSS---YFCTLLGITILYICSTPYFSH--QLIQAVTFTQKLTIE 73
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV+LG G + + E MR Y + I+++GG
Sbjct: 74 DYKKAQAIVVLGGGLRDSNELFGNYAIAAPP-----LERMR-YAAYLHKQTGLPILVTGG 127
Query: 122 DPQKHGLAESIVYNNKL-LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
P+ E+ + +L V +E +S T +NA FS ++ + ++I+LV+
Sbjct: 128 SPEGR-EPEAKIMAQELNDFFHVPVT--WVEEKSNVTEENATFSKPILMHAGIQHIVLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIA 236
+ +H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 185 NQWHMKRAKMLFEREGFNVLAASTTAHQALDIGILPFIPQAQALQNSSIALKEWIGYWKE 244
Query: 237 YYRG 240
G
Sbjct: 245 KLIG 248
>gi|217964896|ref|YP_002350574.1| integral membrane protein [Listeria monocytogenes HCC23]
gi|217334166|gb|ACK39960.1| integral membrane protein [Listeria monocytogenes HCC23]
gi|307570545|emb|CAR83724.1| membrane protein, putative [Listeria monocytogenes L99]
Length = 344
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 106/239 (44%), Gaps = 25/239 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L I L ++++ + ++ I + + + +F+G+ + F YQ
Sbjct: 105 LVIIILFIAWFGSILKNGSPILGVVV-LFVMAFVGYFSFLFLSFLLSTFLYQFNF----P 159
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGG 121
+ + + +++LG+G +P + SR+ + Y K + T I+SGG
Sbjct: 160 RYNQDFLIVLGSGLIGGDRVPPL-------LASRLNRAIAFYEKQYSKTGKRATFIVSGG 212
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVS 180
++E+ + L+ G++ I +E QS++T QN QFS + + + N + +
Sbjct: 213 QGANETVSEAQAMRDYLISKGIDETFIIMEDQSVNTLQNMQFSKAKMDAIMPDYNSLFST 272
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL R+ LY + G+ ++ + +A +Y+ ++E+I I + Y +
Sbjct: 273 NNFHLFRAGLYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAITVMYKK 320
>gi|257085374|ref|ZP_05579735.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
gi|256993404|gb|EEU80706.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
Length = 359
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 37/237 (15%)
Query: 10 VSYWHLLCQSIRKIFFMSCFML---LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ LL + ++ F+L F F + + T+ + + +P K
Sbjct: 129 FFFQSLLPTWLSLPLTIAPFILTYFAFVFYNFLTVSTL------YQFNQP------KYTQ 176
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIISGGDPQK 125
+ IV+LG+G +P + +RI + ++ YK+ + +++ I++SGG
Sbjct: 177 DYIVVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPD 229
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNI--ILVSSA 182
L ES+ L G+ DDI +E S +T +N +FS MI++ N I ++
Sbjct: 230 ELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNN 289
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R+ L+ + G+ + +A ++L ++E+I I++ Y R
Sbjct: 290 YHLFRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMYKR 335
>gi|229592788|ref|YP_002874907.1| hypothetical protein PFLU5409 [Pseudomonas fluorescens SBW25]
gi|229364654|emb|CAY52578.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 253
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 44/247 (17%), Positives = 89/247 (36%), Gaps = 16/247 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLS 59
+L IFL++ + R CF L + +P + + PL
Sbjct: 11 LLPPGIFLLLLALAWWFRRSRPRLAAVCFALGLGGMWLISLPVAVEWGARALESEPPLAR 70
Query: 60 PQW---KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
W + + IV+LG+G +P+ R RL K+ +
Sbjct: 71 EDWSTLAQRADAIVVLGSGRERGDPAWGT-DQPTGIGLERQRYAARLAKAS-----GLPV 124
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+ +GG +E+ + ++ E +S T++NAQ S+ ++ K +
Sbjct: 125 LTTGGLHYGTPPSEAALMA-VSMQDDFGVTVRWKEERSRTTWENAQMSAEILLPEGIKRV 183
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYI 231
++V+ A+H+ RS F+ G + +L +P + + + + E +
Sbjct: 184 VVVTQAWHMPRSVWSFEKAGFTVVPAPVGFLGVDNARPLGGWMPEFKSVWQSGQLINEAV 243
Query: 232 GILIAYY 238
G +
Sbjct: 244 GQIGYRL 250
>gi|144899829|emb|CAM76693.1| Protein of unknown function DUF218 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 261
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 53/236 (22%), Positives = 91/236 (38%), Gaps = 18/236 (7%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ W + + ++ +F+ W I L++ L+ + P PQ + +
Sbjct: 30 FTRWKAWQRPLLLALVGGLAIV--AFVPWQAI---LVQPLENRFPGPSSLPQ---RVDGV 81
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL- 128
++LG + P + A R + + E + +H ++ SGG
Sbjct: 82 IVLGG--ALDPVVSAARDQVAANGA---VERVNALIWLGRHYPKARLVFSGGSGSVTTPD 136
Query: 129 -AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ V L E G D I E QS +T +NA ++ ++ G+ +LV+SA H+ R
Sbjct: 137 KKEAPVARRYLNELGFGTDGIVFEDQSRNTRENAVYTKQLMAPKNGEVWLLVTSAMHMPR 196
Query: 188 SQLYFQHFGINTKASCSDYLNAYYS---IIPLSANFYLTELALKEYIGILIAYYRG 240
S F A DYL L + F L E++G+L RG
Sbjct: 197 SMGAFAAVDWPVIAYPVDYLTTGEGGGFAFDLGSAFSSIGNGLHEWLGLLYYRMRG 252
>gi|257876627|ref|ZP_05656280.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
gi|257810793|gb|EEV39613.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
Length = 356
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 98/242 (40%), Gaps = 30/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L+ + + H IR +F + LL+ F+ + L L S P
Sbjct: 118 VVLTVLLFSDTLLHFFPDWIRTLFGIVPLSLLYLFV-------VFLNFLSISVIYQFNHP 170
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIIS 119
++ + + I++LG G S RI + Y+ K +++S
Sbjct: 171 RYNQ--DFIIVLGAGL-------LNGTTVSPLLAKRINTAISFYESQFKAKKTAPRLLMS 221
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNII 177
GG L E++ + + GV +I +ET S T++N +FS ++ +++ G I
Sbjct: 222 GGQGSDEQLPEAVAMKDYAIAQGVPEGEILVETNSTTTYENMKFSKEIMDSLKPNGYKAI 281
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S+ YH+ R+ LY + + +A +YL L+E++ IL +
Sbjct: 282 FASNNYHIFRAGLYADQAQLKADGIGAP-----------TAFYYLPNAFLREFVAILFMH 330
Query: 238 YR 239
R
Sbjct: 331 KR 332
>gi|304384982|ref|ZP_07367328.1| conserved hypothetical protein [Pediococcus acidilactici DSM 20284]
gi|304329176|gb|EFL96396.1| conserved hypothetical protein [Pediococcus acidilactici DSM 20284]
Length = 338
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 49/214 (22%), Positives = 88/214 (41%), Gaps = 29/214 (13%)
Query: 31 LLFSFIGWGIIPTILLK-HLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+L FIG + T + +L +S+ ++ + K + I+ LG G P ++
Sbjct: 130 VLLVFIGIDVTFTFIFSCYLFYSFLYQIIPIREKV--DYIITLGAGIRSETVTPLLK--- 184
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
R+ + + + + I+SGG ++E+ L V D I
Sbjct: 185 -----GRLDKALEYFWKQD---GNPKFIVSGGQGPDEPVSEAYAMAKYLKSQHVPEDKII 236
Query: 150 LETQSLDTFQNAQFSSSMI----KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
LE QS T QN +FS I K +I ++ YH+ RS +Y + G+N S
Sbjct: 237 LEDQSTTTLQNMKFSKQKIEKDWKKSGVPKVIFATNNYHVLRSAIYARKAGLNANGVGSP 296
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++ ++L ++EYI +L+ Y +
Sbjct: 297 -----------TSFYFLPSALIREYIALLVIYKK 319
>gi|260567250|ref|ZP_05837720.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260156768|gb|EEW91848.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
Length = 263
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + + L V W + + ++ ++ + I +P L+ LQ Y L P
Sbjct: 5 LITALLVLGVFLWWGKWRKT-GVLLIALAVISYGAIVSTWLPNFLMSRLQEPYSSKLAEP 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + V+ G GT + +EP SY IF Y C+ + CT I +G
Sbjct: 64 --LEDNTVFVVFGLGTQTVNEQGHNTVEPLTFSYGSIFAAAHFYHECQSSGVSCTFITTG 121
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 122 ADVAGTGVSEAASTAAELEKAGVDSRAIIQDDRPHNAWTTARNVAATLRELKPARVVVLQ 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL S S +F +LAL E IG
Sbjct: 182 PAPMMGRTLLYLAHFGIKPEPVATSYLTVNGSTHFSTSLSFLAMDLALNEEIGAWRY 238
>gi|325571076|ref|ZP_08146648.1| hypothetical protein HMPREF9087_2937 [Enterococcus casseliflavus
ATCC 12755]
gi|325156161|gb|EGC68347.1| hypothetical protein HMPREF9087_2937 [Enterococcus casseliflavus
ATCC 12755]
Length = 399
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 100/242 (41%), Gaps = 30/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L+ + + H IR +F + L++ F+ + L L S P
Sbjct: 161 VVLTVLLFSDTLLHFFPYWIRTLFGVVPLSLMYLFV-------VFLNFLSISVIYQFNHP 213
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSC-KQHSMHCTIIIS 119
++ + + I++LG G S RI + + Y++ K +++S
Sbjct: 214 RYNQ--DFIIVLGAGL-------LNGTTVSPLLAKRINKAISFYEAQFKAKKTAPRLLMS 264
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNII 177
GG L E++ + GV +I +ET S T++N +FS ++ +++ G +I
Sbjct: 265 GGQGSDEKLPEAVAMKEYAVAQGVPEGEILVETNSTTTYENMKFSKEIMDSLKPNGYKVI 324
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S+ YH+ R+ LY + + +A +YL L+E++ IL +
Sbjct: 325 FSSNNYHIFRAGLYADQAQLKADGIGAP-----------TAFYYLPNAFLREFVAILFMH 373
Query: 238 YR 239
R
Sbjct: 374 KR 375
>gi|114321439|ref|YP_743122.1| hypothetical protein Mlg_2290 [Alkalilimnicola ehrlichii MLHE-1]
gi|114227833|gb|ABI57632.1| protein of unknown function DUF218 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 252
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
W + LL L+ + P+ + + IV+LG+G + +P + + + R+
Sbjct: 53 WAPVADRLLAPLEQRHP-PVHDARDHPEAQAIVVLGSGYSPHLALP-VTAQLNDSGLVRL 110
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E +RL++ +I+SGG + + + GV D + T+ DT
Sbjct: 111 NEGIRLHRQ----RPALPLIVSGGARPDQAPI-AEGFRRAAIALGVADDRLLPLTEPRDT 165
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS----- 212
Q A + ++ G ++LV+SA H+ R+Q +F G+N + + + +
Sbjct: 166 AQEAYATREVLGE--GATVLLVTSASHIHRAQAHFHRAGLNPIPAPTRHKAGHVRPATPG 223
Query: 213 -IIPLSANFYLTELALKEYIGILIA 236
IP + + +E AL EY+G+L A
Sbjct: 224 YWIPSATHLRKSERALYEYMGLLAA 248
>gi|46143233|ref|ZP_00135637.2| COG1434: Uncharacterized conserved protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207969|ref|YP_001053194.1| hypothetical protein APL_0485 [Actinobacillus pleuropneumoniae L20]
gi|126096761|gb|ABN73589.1| hypothetical protein APL_0485 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
Length = 252
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ WIF + + H L F + M + L++ ++ L
Sbjct: 23 LILWIFSL--FLHKLQFKKLSYFCTALGMTILYICSTPYFSHQLIQ--AVTFSEKLTIED 78
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+KK IV+LG G + R + R+ L+K I+++GG
Sbjct: 79 YKK-AQAIVVLGGGVRNSHELFG-RYAIAAAPLERMRYAAYLHKQ-----TGLPILVTGG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ E+ + +L +E+ S T QNA S +M+K IILV++
Sbjct: 132 SPEGR-EPEAKIMAQEL-HDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDRIILVTN 189
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAY 237
+H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 190 QWHMKRAKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIGYWKEK 249
Query: 238 YRG 240
G
Sbjct: 250 LIG 252
>gi|298489000|ref|ZP_07007023.1| Putative membrane protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298156498|gb|EFH97595.1| Putative membrane protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 256
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 92/240 (38%), Gaps = 13/240 (5%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQ 61
+ ++ LI+ +W + F + + + + + ++ P
Sbjct: 16 ILFVLLILGWWLRRSRPSLAAAFFAVGLGGLWLMSLPVAVEFAARKMERVPPLPQQQWAT 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL + I+ +GG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTWGT-DTPTGLGLERLRLAARL-----SKTSGLPILTTGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+E+ + L E S T++NA ++++++ + K ++LV+
Sbjct: 130 LHFDQPPSEASIIAQSL-HDDFGVTARWQEGLSRTTWENATMTAAVLQPLGIKRVVLVTQ 188
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
A+H++R++ F+ G ++ +L + +P S F + + L E G+L+
Sbjct: 189 AWHMQRARWSFEKAGFIVVSAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVY 248
>gi|254370529|ref|ZP_04986534.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|151568772|gb|EDN34426.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
Length = 158
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
++EP+ +Y RI +T +Y Q IIISGG P L+E+ +Y + L + G+
Sbjct: 8 GKLEPALSAYDRILKTAEVYHQHPQQ-----IIISGGAPFGEKLSEAEIYADVLDKLGIL 62
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ I LE S +T+QNA+F ++ N + LV+ H KR+++ F F INT + S
Sbjct: 63 KSKIILEKNSKNTYQNAEFIKKILMNDK-NTYCLVTGGIHYKRAKIIFDKFAINTISIAS 121
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
I+P + NFY+T+ + EY+GI+ Y
Sbjct: 122 SKFVPNIKILPNAYNFYITQNIVHEYLGIIRIYL 155
>gi|91977540|ref|YP_570199.1| hypothetical protein RPD_3072 [Rhodopseudomonas palustris BisB5]
gi|91683996|gb|ABE40298.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB5]
Length = 264
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 54/252 (21%), Positives = 104/252 (41%), Gaps = 28/252 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ L+ + L+++ W + + + G+ + ++LL L + P
Sbjct: 22 ICLAGVVLLLTRWRRAGARVLGVGVVLL-----LVAGYSPLGSVLLLTLSERF------P 70
Query: 61 QWKKDGNI---IVLLGNGTTIIPTIPAIRIEPSFQ-SYSRIFETMRLYKSCKQHSMHCTI 116
W+ +G I++LG + + A R S R+ + L + I
Sbjct: 71 PWQFNGRAPDGIIVLGG--AVDSEVSAARSSLEIDSSAERVVAALELARQY----PQARI 124
Query: 117 IISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
I SGG + +AE+ + L GV D + LE++S T +NA F+ ++ G+
Sbjct: 125 IYSGGSGNLIANSVAEAPIAGELLARFGVAPDRVVLESKSRTTAENASFTRELVSPKPGE 184
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKE 229
+LV+SA+H+ RS F+ + +A D+ + LS+ ++A+ E
Sbjct: 185 VWLLVTSAFHMPRSIEAFRAVEFDVQAYPVDWRTRGWRDAALPFDRLSSGLARMDVAVHE 244
Query: 230 YIGILIAYYRGN 241
+ G+L G
Sbjct: 245 WAGLLAYRLGGK 256
>gi|307260971|ref|ZP_07542653.1| hypothetical protein appser12_5380 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306869273|gb|EFN01068.1| hypothetical protein appser12_5380 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 252
Score = 141 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ WIF + + H L F + M + L++ ++ L
Sbjct: 23 LILWIFSL--FLHKLQFKKLSYFCTALGMTILYICSTPYFSHQLIQ--VVTFSEKLTIED 78
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+KK IV+LG G + R + R+ L+K I+++GG
Sbjct: 79 YKK-AQAIVVLGGGVRNSHELFG-RYAIAAAPLERMRYAAYLHKQ-----TGLPILVTGG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ E+ + +L +E+ S T QNA S +M+K IILV++
Sbjct: 132 SPEGR-EPEAKIMAQEL-HDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDRIILVTN 189
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAY 237
+H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 190 QWHMKRAKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIGYWKEK 249
Query: 238 YRG 240
G
Sbjct: 250 LIG 252
>gi|54298617|ref|YP_124986.1| hypothetical protein lpp2681 [Legionella pneumophila str. Paris]
gi|53752402|emb|CAH13834.1| hypothetical protein lpp2681 [Legionella pneumophila str. Paris]
Length = 250
Score = 141 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 56/242 (23%), Positives = 110/242 (45%), Gaps = 20/242 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L I + + Y + + F+ +LL GW +P+ L L+ Y +
Sbjct: 19 LLTLGICIFLLYRRRAPTFTKVMLFVVLIVLLAMSTGW--LPSYLTYQLESRYP---IVK 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG G I +PA + S S R+ E +RL+++ +++SG
Sbjct: 74 RVNPNVKWVVVLGGGQNIGEEMPANDLLTS-ASIKRLIEGVRLFRTL----PDAKLLLSG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E+++ ++ + I +ET S++T A ++++ + + LV+
Sbjct: 129 GGSAGE-QSEALLLTELAKWFAIDSEKIVVETASINTADQALELAAIVHD---QPFYLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIGIL 234
SA H+ RS Q G++ A+ +D+ + + +IP S N T +AL E +G +
Sbjct: 185 SAIHMPRSMALCQQQGLHPIAAPTDFTFFWSTDTWVKMVIPNSYNLAYTSIALHEILGKI 244
Query: 235 IA 236
A
Sbjct: 245 WA 246
>gi|257867722|ref|ZP_05647375.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257874049|ref|ZP_05653702.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
gi|257801805|gb|EEV30708.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257808213|gb|EEV37035.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
Length = 356
Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 97/242 (40%), Gaps = 30/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L+ + + H IR +F + LL+ F+ + L L S P
Sbjct: 118 VVLTVLLFSDTLLHFFPDWIRTLFGIVPLSLLYLFV-------VFLNFLSISVIYQFNHP 170
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIIS 119
++ + + I++LG G S RI + Y+ K +++S
Sbjct: 171 RYNQ--DFIIVLGAGL-------LNGTTVSPLLAKRINTAISFYESQFKAKKTAPRLLMS 221
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNII 177
GG L E++ + GV +I +ET S T++N +FS ++ +++ G I
Sbjct: 222 GGQGSDEQLPEAVAMKEYAIAQGVPEGEILVETNSTTTYENMKFSKEIMDSLKPNGYKAI 281
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S+ YH+ R+ LY + + +A +YL L+E++ IL +
Sbjct: 282 FASNNYHIFRAGLYADQAQLKADGIGAP-----------TAFYYLPNAFLREFVAILFMH 330
Query: 238 YR 239
R
Sbjct: 331 KR 332
>gi|315187461|gb|EFU21217.1| protein of unknown function DUF218 [Spirochaeta thermophila DSM
6578]
Length = 249
Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 104/243 (42%), Gaps = 26/243 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L L+V L S R F L ++ +LL L+ ++ P
Sbjct: 18 LWVVFALLVGAVSLRRGSRRGAVAAWVFAGLLYLGNTHLVEHLLLAPLERAF------PV 71
Query: 62 WKKDGNI--IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
W G + +V+LG G + P S +R++ +R + + ++++
Sbjct: 72 WDAGGGVRYVVVLGGGAQAGTPAGDV---PGVVSLARLWGGLRYARM-----LGVPLVLA 123
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG G +E + + + E G +++ +E +S T++NA+ ++ M+ ++LV
Sbjct: 124 GGSVWDEGKSEGEMMADLVRELGW--EEVVVEGESRTTWENARNTARMV---GRGPVLLV 178
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGIL 234
+SAYH++R+ F+ G+ + D+ + + + + + AL+EY+G++
Sbjct: 179 TSAYHMQRAVWCFRAQGVEVIPAPVDFRDERPAHWIFYLGISAEAARDVQAALREYVGMV 238
Query: 235 IAY 237
Sbjct: 239 WYR 241
>gi|217974034|ref|YP_002358785.1| hypothetical protein Sbal223_2876 [Shewanella baltica OS223]
gi|217499169|gb|ACK47362.1| protein of unknown function DUF218 [Shewanella baltica OS223]
Length = 233
Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 45/226 (19%), Positives = 99/226 (43%), Gaps = 12/226 (5%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + + +SC L F+ + L++ L+ +Y ++ +++LG+
Sbjct: 16 VWRRRSMAKYLVSCAFFLLLFLSSQLGVNTLVRPLESAYP---INSTPITGACFVMVLGS 72
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
+ I A++ S + +R+ E +R C +I+SG + ++ + +
Sbjct: 73 AHSDIQGATAVQ-SLSAVALARLSEGVR----QLNLGQECKLIVSGWGGELTQVSHAEMM 127
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
N +E GV++ I + DT + AQ+ + + LV+SA H+ R+ F
Sbjct: 128 VNAAVELGVDKRRIIQFPLARDTLEEAQYLQW---ELGEEPFRLVTSATHMPRAMAIFTA 184
Query: 195 FGINTKASCSDYLNAYYSIIPLSA-NFYLTELALKEYIGILIAYYR 239
++ +A+ +D++ L+A N ++ A+ E IG L + +
Sbjct: 185 KDLHPEAAPTDFIGRDDFWWRLTADNLVASQRAIHECIGRLWLWLK 230
>gi|158424456|ref|YP_001525748.1| hypothetical protein AZC_2832 [Azorhizobium caulinodans ORS 571]
gi|158331345|dbj|BAF88830.1| uncharacterized conserved protein [Azorhizobium caulinodans ORS
571]
Length = 271
Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats.
Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 16/225 (7%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
F G+ L+ L+ + + + + I++LG +P
Sbjct: 43 FAVLATAGLMGFGFSPAGNYLMSPLEERFPPFVGD---GRPVDGIIMLGG-----AEVPE 94
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV- 143
+ + + + E + + + + ++ SGG + + +L + V
Sbjct: 95 VSVVRGVTALNDAAERVLAFAALARRYPQAKLVFSGGSGEYDESMPAAQDAVRLAFADVG 154
Query: 144 -ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ + E +S +T QNA + +I + G+ +LV+SA+H+ R+ F+ G A
Sbjct: 155 LDVTRVIYERRSRNTAQNAVETRKLITPVPGERWLLVTSAFHMPRAIGCFREVGFPVTAY 214
Query: 203 CSDYLNAYYSII-----PLSANFYLTELALKEYIGILIAYYRGNR 242
DY + +++ +T++A++E++G L AYY R
Sbjct: 215 PVDYRTLGPGRLNGVFRRVASGLDITDIAVREWMG-LGAYYASGR 258
>gi|304397080|ref|ZP_07378959.1| protein of unknown function DUF218 [Pantoea sp. aB]
gi|304355229|gb|EFM19597.1| protein of unknown function DUF218 [Pantoea sp. aB]
Length = 260
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 50/206 (24%), Positives = 85/206 (41%), Gaps = 22/206 (10%)
Query: 42 PTILLKHLQFSYQRPLLSPQWK--KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
LL L Y P WK + + IV+LG G T P A S R+ E
Sbjct: 59 ADRLLLPLDSRY------PTWKGAEKVDYIVVLGGGYTFNPG-WAPSSNLLNNSLPRVAE 111
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+R ++ + T+I +G + + + V GV + I++ Q DT
Sbjct: 112 GVRQWR----RNPQSTLIFTGAAGGTNPKSSAWVAAQVAESLGVPHEHIQILDQPRDTAD 167
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY------LNAYYSI 213
AQ ++ + ++LV+SA H+ R+ +F G+ A+ ++ LN +
Sbjct: 168 EAQAVKTV---AGNRPLMLVTSANHMPRAIRFFHAVGLKPIAAPANQLAITSPLNGWERA 224
Query: 214 IPLSANFYLTELALKEYIGILIAYYR 239
IP S +E A+ E +G L+ +
Sbjct: 225 IPSSIWLSHSERAVYETLGTLLQRLK 250
>gi|83643535|ref|YP_431970.1| hypothetical protein HCH_00644 [Hahella chejuensis KCTC 2396]
gi|83631578|gb|ABC27545.1| uncharacterized conserved protein [Hahella chejuensis KCTC 2396]
Length = 251
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 91/246 (36%), Gaps = 22/246 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFF--MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+ L+ + ++ L+ RK+ + L I L+ L+ Y
Sbjct: 15 LPLALLISFIALMMLIRGRRRKLALGMLGVVWLGLFVISTPWFSDKLMAPLESQYP---- 70
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P ++ +V+LG ++P + RI E MR+ + +++
Sbjct: 71 -PYAGQEVRYVVVLGGYHESDSSLPITSYIEG-DAIYRIIEGMRVA----LLNPESRLLV 124
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SG + L+ + Y G R+ I L+ DT + A + + + + L
Sbjct: 125 SGY-ARTDPLSNAEAYARLAESLGFPRERIDLQEDPRDTHEEALAAQARMGE---QPFAL 180
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYIG 232
V+SAYH+ R+ F+ G++ + + + + P T+ A EY+G
Sbjct: 181 VTSAYHMPRAMQLFEGVGLHPIPAPTGHTIKQHQELDWRRFRPALGGLAATQKAWHEYLG 240
Query: 233 ILIAYY 238
L A
Sbjct: 241 ALWANL 246
>gi|33240920|ref|NP_875862.1| hypothetical protein Pro1471 [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238449|gb|AAQ00515.1| Uncharacterized conserved protein with signal peptide
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 241
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 53/250 (21%), Positives = 103/250 (41%), Gaps = 24/250 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML I L + HL + +S F+ L++F G++ +L K ++ +QR +
Sbjct: 1 MLPLGITLCTLFLHLNKKYSSST--LSIFIFLWTF-SIGLVSQMLWKFVEHPWQR--IDE 55
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+L +G + P I + R ++L+K K + +G
Sbjct: 56 SHAPTADAIVVLSSGGRSLA--PGISNIIEWNDPDRFLAGVKLFKEKK----APKLFFTG 109
Query: 121 GDPQKHGL--AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNII 177
G E +Y + + G+ + I + +T + A IK+ I+
Sbjct: 110 GASPYRKALKTEGDLYKEEAISLGIPKKAISTTGRVFNTAEEAFQIRRNIKDKGSPSKIL 169
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLN----------AYYSIIPLSANFYLTELAL 227
LV+SA+H++R++ F+ G + D+ Y+ IP S + +++ AL
Sbjct: 170 LVTSAFHMQRAKRQFERQGFIVQPFPVDFKTERKFRKTYWKNPYNWIPNSESLFMSSKAL 229
Query: 228 KEYIGILIAY 237
+E +G +
Sbjct: 230 RELLGRAVYR 239
>gi|254430947|ref|ZP_05044650.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
gi|197625400|gb|EDY37959.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
Length = 265
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 26/214 (12%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY 104
L+ L+ L P + +V+LG G P P R ++ R+ +RL
Sbjct: 58 LIWGLEERST--ALEPASLPAADAVVVLGGGLR--PAQPPRRGVEVGEAGDRLLTGVRLL 113
Query: 105 KSCKQHSMHCTIIISGGD----PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
+ K T++ SGG K E+ + +E G+ + I L ++ T +
Sbjct: 114 RQGK----APTLVTSGGRVHFTAGKPPPPEAEWARDLAVELGIAPERILLAREARTTAEE 169
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF-QHFGINTKASCSDYL------------ 207
A+ +M + ++LV+SA H+ R+ F + G+ A +D+
Sbjct: 170 ARDLGAMGRTRGWSRVLLVTSASHMPRALATFQRRSGLEVVAVPTDFQLPQRASYGAPTL 229
Query: 208 -NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+A S+ P + YL+ + LKE++G+L+ RG
Sbjct: 230 GSALLSVAPDAEALYLSTVMLKEHLGLLVYRLRG 263
>gi|152994702|ref|YP_001339537.1| hypothetical protein Mmwyl1_0668 [Marinomonas sp. MWYL1]
gi|150835626|gb|ABR69602.1| protein of unknown function DUF218 [Marinomonas sp. MWYL1]
Length = 255
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
W + L+ ++ Y + ++ + +++LG+G + P + + +
Sbjct: 61 GLTSWNPVANSLIATVEHDYPVFDV----QQPVDAVIVLGSGHKDLSNTPTV-MALGNSA 115
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
R+ E +R+ K+ + + + +SG Q + V +E GV+ D IK
Sbjct: 116 LFRLEEGLRILKA----NPNAQLFVSGYSGQMT-EPHAEVMRRAAIELGVQPDRIKAFPL 170
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS- 212
+ DT + A ++ GKN LV+ A HLKR+ ++F+ GI + + YL + S
Sbjct: 171 AKDTEEEANSMKPYLE---GKNAALVTEASHLKRASIFFEQAGIKIIPAPAMYLGSEKSD 227
Query: 213 IIPLSANFYLTELALKEYIGILIAYYRG 240
+ Y ++ A E++G + +G
Sbjct: 228 WQIDATAAYKSQRAFYEWLGRTWQWIKG 255
>gi|328543434|ref|YP_004303543.1| hypothetical protein [polymorphum gilvum SL003B-26A1]
gi|326413179|gb|ADZ70242.1| DUF218 protein [Polymorphum gilvum SL003B-26A1]
Length = 265
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 52/250 (20%), Positives = 103/250 (41%), Gaps = 20/250 (8%)
Query: 4 SWIFLIVSYWHLLCQ-SIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+++FL+++ +L R+I S LL G + +L+ L+ + P P
Sbjct: 17 NFVFLLIAAGLVLAFGRFRRIGLVLASAGGLLLGVAGLSPLANLLMVPLEDRFPAPSTLP 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG + + R P + E + + + I+ SG
Sbjct: 77 E---TVDGILVLGGAIDTV--VTGKRPFPGLTTAG---ERVAVIPGLARRYPQALIVHSG 128
Query: 121 GDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G + E+ G+ D + LE +SL+T+QNA ++ ++++ G+ +L
Sbjct: 129 GSGLLFGNSSTEAEGAAQLFESFGLAPDRLVLEDRSLNTWQNAVYTKALVEPRAGQTWLL 188
Query: 179 VSSAYHLKRSQLYFQHFGIN-TKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIG 232
V+SA H+ R+ F+ G D+ +S ++A +E++G
Sbjct: 189 VTSAMHMPRAVGVFRKAGWTGVVPYPVDWRTRGPEDRLRVFGAVSDGLTRLDIAFREWVG 248
Query: 233 ILIAYYRGNR 242
L+AY R
Sbjct: 249 -LVAYRASGR 257
>gi|332307549|ref|YP_004435400.1| hypothetical protein Glaag_3198 [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332174878|gb|AEE24132.1| protein of unknown function DUF218 [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 251
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 13/230 (5%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLL 72
++ + R ++SC +L+ F + P++LL K L+ Y +S + ++ + IV+L
Sbjct: 28 RIVPKGKRVYQWLSCLPILWVFFCSLVYPSVLLIKPLEDQYPTVKVSSKLWQNADAIVVL 87
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
+P + P R +YK I+ + +++
Sbjct: 88 ACNHFDDEGLPFVSRWPQCTM-QRNLHAALMYKEKHLPIHLAAGIL----NELDSASQAH 142
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
L+ GV +DI Q DT + +KN K + LV+SA HL R+ YF
Sbjct: 143 YNKTFLMTLGVSPNDIYTHPQGHDTESEVDALAPHLKN---KYVALVTSASHLPRAVQYF 199
Query: 193 QHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ I ++L+ ++ +P + + Y +E A+ EY+G++ Y
Sbjct: 200 ELHDIKVLPIPVEHLSRKNVSFTIGLPNAFSLYRSERAIHEYLGLIYQRY 249
>gi|254455840|ref|ZP_05069269.1| conserved hypothetical protein [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082842|gb|EDZ60268.1| conserved hypothetical protein [Candidatus Pelagibacter sp.
HTCC7211]
Length = 228
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 12/208 (5%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
I+ L+ +L+ YQ L P + + IV+L I + + E ++ R
Sbjct: 27 SLPIVSDKLVAYLESDYQ--LSKPSNIEPADSIVVLSGMIRTINSKDGLDYEFG-EASDR 83
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
IF + L+K K + I+ G P G+ E + +G+ ++I L +
Sbjct: 84 IFAGINLFKEKKAPKL---ILTRGKLPWSVGIPEGEYLKEIAINNGISENNILLTENVEN 140
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YY 211
T Q A+ ++ + K ++LV+SA+H+ R+Q F+ GIN D+ +
Sbjct: 141 TDQEAKAIKKLLSEDKSK-VLLVTSAFHMPRAQKVFEAAGINVVPFPVDFQKGLSKITFM 199
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYR 239
S IP + T ++E IG + +
Sbjct: 200 SFIPSANALSGTSFFVREMIGRIYYNLK 227
>gi|320527634|ref|ZP_08028808.1| hypothetical protein HMPREF9430_00919 [Solobacterium moorei F0204]
gi|320131955|gb|EFW24511.1| hypothetical protein HMPREF9430_00919 [Solobacterium moorei F0204]
Length = 268
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 90/211 (42%), Gaps = 22/211 (10%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+L G+ ++ L+ Y + D + +V+LG G + P+
Sbjct: 59 MLKMGFGFSVLYISLVFVAFMFYSMFIQLLPRHVDFDYVVVLGAGLID-------GLRPT 111
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
+R+ + +R++ C I++SGG ++E+ L++ G++ I +
Sbjct: 112 KLLANRLDKAIRVFNKSVSS---CYIVVSGGQGSDEKVSEAEAMRTYLIDKGIKNHQIIM 168
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
E +S++TFQN + S +IK G+ I +V+S +H+ R+ L + I +
Sbjct: 169 EDKSVNTFQNMRNSYEIIKRRGGRMRIAVVTSNFHVYRALLLCRSLDIPAIGIGAPI--- 225
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
A ++ ++EY+ + Y +G
Sbjct: 226 --------AFYFWPSAMIREYVALCKHYLKG 248
>gi|303252155|ref|ZP_07338323.1| hypothetical protein APP2_1129 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247491|ref|ZP_07529536.1| hypothetical protein appser2_4870 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302648938|gb|EFL79126.1| hypothetical protein APP2_1129 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855994|gb|EFM88152.1| hypothetical protein appser2_4870 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 252
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ WIF + + H L F + M + L++ ++ L
Sbjct: 23 LILWIFSL--FLHKLQFKKLSYFCTALGMTILYICSTPYFSHQLIQ--AVTFSEKLTIED 78
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+KK IV+LG G + R + R+ L+K I+++GG
Sbjct: 79 YKK-AQAIVVLGGGVRNSHELFG-RYAIAAAPLERMRYAAYLHKQ-----TGLPILVTGG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ E+ + +L +E+ S T QNA S +M+K IILV++
Sbjct: 132 SPEGR-EPEAKIMAQEL-HDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDRIILVTN 189
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAY 237
+H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 190 QWHMKRTKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIGYWKEK 249
Query: 238 YRG 240
G
Sbjct: 250 LIG 252
>gi|217976941|ref|YP_002361088.1| protein of unknown function DUF218 [Methylocella silvestris BL2]
gi|217502317|gb|ACK49726.1| protein of unknown function DUF218 [Methylocella silvestris BL2]
Length = 264
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 45/249 (18%), Positives = 97/249 (38%), Gaps = 16/249 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWG-IIPTILLKHLQFSYQRPLLS 59
+ + ++ + + R ++ + + + LL ++ + P +
Sbjct: 16 LTFLILLALIGVVLMFTRFWRAGRALAAAGAFAMALLFLTPVGVALLLPMENRFPPPPV- 74
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
I++LG ++ + R+ + L K ++ +
Sbjct: 75 --DLPAPTGIIVLGGALNQSRSVARGQATFGGDG-ERLIAGIELSKRY----PSARLVFT 127
Query: 120 GGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
GG + + ES L+ GV D ++ E++S +T++NA F+ +++ G+ +
Sbjct: 128 GGSGNLVEQTIVESTGVKKFWLDMGVPPDRMEFESRSRNTWENALFTRDLLRPKPGETWL 187
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIG 232
LV+SA+H+ RS F+ G + A Y + + + P L LA +E+IG
Sbjct: 188 LVTSAWHMPRSMGIFRRLGFDVIAYPVAYRTSGDSSDWSFLRPAFERVPLVVLAFREWIG 247
Query: 233 ILIAYYRGN 241
+L G
Sbjct: 248 LLAYRLTGK 256
>gi|91793951|ref|YP_563602.1| hypothetical protein Sden_2600 [Shewanella denitrificans OS217]
gi|91715953|gb|ABE55879.1| protein of unknown function DUF218 [Shewanella denitrificans OS217]
Length = 264
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 45/215 (20%), Positives = 94/215 (43%), Gaps = 11/215 (5%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ ML + I +L L+ Y + Q + +++LG+G ++ + A
Sbjct: 48 GLVITMLAIVLLSQLQISHLLGGSLEQRYS---ANHQAIQGECTVMVLGSGHSLTLGLSA 104
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQ---HSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ + S + +R+ E +R K + C +++SG + + G + + V E
Sbjct: 105 TQ-QLSPTALARLVEGIRQLKLSEPTTEAPHSCRLVVSGWNGGREGASHAEVMALAAQEL 163
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + I ++ DT + ++ + LV+SA H+ R+ + G+N +A
Sbjct: 164 GVSKAQITTFPEARDTIEELMSMKQIMGEAPFR---LVTSATHMSRAMRIARSLGLNPEA 220
Query: 202 SCSDYLNAYYSIIP-LSANFYLTELALKEYIGILI 235
+ S++L + N L++ +L EY+G+L
Sbjct: 221 APSNFLAGDGYWWRLSADNLILSQASLHEYVGMLW 255
>gi|323342995|ref|ZP_08083226.1| hypothetical protein HMPREF0357_11407 [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322463059|gb|EFY08254.1| hypothetical protein HMPREF0357_11407 [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 346
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 48/247 (19%), Positives = 101/247 (40%), Gaps = 42/247 (17%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKI------FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR 55
L+ ++F+I L+ Q +R + SCF +F FI + L S+
Sbjct: 114 LIFFVFIIPLLSKLIPQELRWMHTLLTCITFSCFYFIFVFINF----------LSSSFLY 163
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
P KD + I++LG+G +P + +RI + Y ++
Sbjct: 164 QFFKP--HKDRDFIIVLGSGLRNGTEVPPL-------LAARIDVALEYYH---HQTVPPR 211
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+I SGG + + E + L G+ +ET+S T++N FS ++ + +
Sbjct: 212 LIFSGGQGEDECVPEGQAMRDYALNRGIPESHALMETRSTTTYENMLFSKEIMDTYEFDH 271
Query: 176 ---IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+ S+ +H+ R+ Y + G++ + +A +++ ++E+I
Sbjct: 272 PYTCLFSSNTFHIFRASQYARRVGLDAHGIGA-----------KTAGYFVPNALIREFIA 320
Query: 233 ILIAYYR 239
+++ + R
Sbjct: 321 LMVMHRR 327
>gi|52842834|ref|YP_096633.1| hypothetical protein lpg2628 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629945|gb|AAU28686.1| membrane protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 250
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 56/242 (23%), Positives = 112/242 (46%), Gaps = 20/242 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L I + + Y L + + F+ +LL GW +P+ L L+ Y +
Sbjct: 19 LLALGICIFLLYRRLAPTFTKVMLFVVLIVLLAMSTGW--LPSYLTYQLESRYP---IVK 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG G I +PA + S S R+ E +RL+++ +++SG
Sbjct: 74 RVNPNVKWVVVLGGGQNIGEEMPANDLLTS-ASIKRLIEGVRLFRTL----PDAKLLLSG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E+++ ++ + + +ET S++T A+ ++++ + + LV+
Sbjct: 129 GGSAGE-QSEALLLTELAKWFAIDSEKVVVETVSINTADQARELAAIVHD---QPFYLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIGIL 234
SA H+ RS Q G++ A+ +D+ + + +IP S N T +AL E +G +
Sbjct: 185 SAIHMPRSMALCQQQGLHPIAAPTDFTFFWSTDTWVKMVIPNSYNLAYTSIALHEILGKI 244
Query: 235 IA 236
A
Sbjct: 245 WA 246
>gi|238763350|ref|ZP_04624314.1| hypothetical protein ykris0001_3060 [Yersinia kristensenii ATCC
33638]
gi|238698449|gb|EEP91202.1| hypothetical protein ykris0001_3060 [Yersinia kristensenii ATCC
33638]
Length = 273
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 57/247 (23%), Positives = 98/247 (39%), Gaps = 25/247 (10%)
Query: 1 MLLSWIFLI-----VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR 55
M L ++ +I + W Q K F + L+ I + LL L+ Y
Sbjct: 32 MPLPFLLIIMGLALILLWFTRWQKSGKTLF-ALSWLILLLISLQPVADRLLLPLEKQYAT 90
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
Q + IV+LG G T P A S R+ E +RLY++ +
Sbjct: 91 Y----QGNDPVDYIVVLGGGYTFNPN-WAPSANLFSNSLPRVTEGIRLYRAH----PNAK 141
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
++ +GG + + + GV DI Q DT + A ++++ K
Sbjct: 142 MVFTGGAGP-NSQSSAKTAAQVAESLGVPAADIIALEQPKDTAEEAAAVATLV---GNKP 197
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKE 229
+LV+SA HL R+ +F G++ + ++ L ++ IIP + TE A E
Sbjct: 198 FLLVTSASHLPRAIKFFTAKGLHPIPAPANQLAITSPLHSWERIIPAATYLGHTERAWYE 257
Query: 230 YIGILIA 236
+G++
Sbjct: 258 TLGLIWQ 264
>gi|254381969|ref|ZP_04997332.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194340877|gb|EDX21843.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 338
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 39/238 (16%), Positives = 102/238 (42%), Gaps = 29/238 (12%)
Query: 5 WIFLIVSYWHLLCQSIRKIF--FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
IF +++ + + ++ + C +LL ++ + + + L
Sbjct: 105 GIFALIALVVTVPERGSRLVDSLVVCLVLLAGYVSFLFVCFLAYACLYGR-------ITV 157
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGG 121
+ + + +V+LG+G T +P + SR+ + R++ + +++ SGG
Sbjct: 158 RGNVDYVVVLGSGLTGGEDVPPL-------LASRLEKGHRIHTAQLARGGPAPLLLASGG 210
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNIILVS 180
+ E+ + L+ GV R+ ++LE +S T +N +FS ++ + G ++V+
Sbjct: 211 QGPGEAVPEARAMADWLIARGVAREHVRLEDRSRTTEENLRFSRELMAEENPGYRCVVVT 270
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+++H R+ + + G+N + S +A ++ ++E++ + +
Sbjct: 271 NSFHAFRAAMTARRAGVNGQVLGSP-----------TAAYFWPSATIREFVAVFWEHR 317
>gi|315174445|gb|EFU18462.1| conserved hypothetical protein [Enterococcus faecalis TX1346]
Length = 401
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 37/237 (15%)
Query: 10 VSYWHLLCQSIRKIFFMSCFML---LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ LL + ++ F+L F F + + T+ + + +P K
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAFVFYNFLTVSTL------YQFNQP------KYTQ 218
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIISGGDPQK 125
+ IV+LG+G +P + +RI + ++ YK+ + +++ I++SGG
Sbjct: 219 DYIVVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPD 271
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNI--ILVSSA 182
L ES+ L G+ DDI +E S +T +N +FS MI++ N I ++
Sbjct: 272 ELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNN 331
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R+ L+ + G+ + +A ++L ++E+I I++ Y R
Sbjct: 332 YHLFRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMYKR 377
>gi|315145674|gb|EFT89690.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
gi|315160239|gb|EFU04256.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
Length = 401
Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 105/237 (44%), Gaps = 37/237 (15%)
Query: 10 VSYWHLLCQSIRKIFFMSCFML---LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ LL + ++ F+L F F + + T+ + + +P K
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAFVFYNFLTVSTL------YQFNQP------KYTQ 218
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIISGGDPQK 125
+ IV+LG+G +P + +RI + ++ YK+ + +++ I++SGG
Sbjct: 219 DYIVVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPD 271
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNI--ILVSSA 182
L ES+ L G+ DDI +E S +T +N +FS MI++ N I ++
Sbjct: 272 ELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNN 331
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R+ L+ + G+ + +A ++L+ ++E+I I++ Y R
Sbjct: 332 YHLFRAGLFARMAGLKADGIGA-----------KTAFYFLSNAFIREFIAIVVMYKR 377
>gi|229494703|ref|ZP_04388461.1| integral membrane protein [Rhodococcus erythropolis SK121]
gi|229318370|gb|EEN84233.1| integral membrane protein [Rhodococcus erythropolis SK121]
Length = 336
Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 42/239 (17%), Positives = 104/239 (43%), Gaps = 30/239 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ ++ L + LL Q + F L+ S++G+ +L Y
Sbjct: 102 LLVPYVLLASA---LLTQRYWLAVVLGSFSLVASYLGFLFTSFLL-------YSYVYGRQ 151
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + IV+ G G + P + SR+ + ++++ + +++SG
Sbjct: 152 KYQPGMDAIVVHGAGLSGADVTPLL--------ASRLDKAADVFRAEVREGRSPLLVVSG 203
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILV 179
G ++E+ L++ G+ R+ + LE +S T +N +++ +++ K ++LV
Sbjct: 204 GKGSDEVVSEAEAMCVYLVDHGIPRESVILEDRSTTTLENLEYTRDLLRANTTKPRMVLV 263
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S +H+ R+ + + ++ + S +A +YL L+E+ + + +
Sbjct: 264 TSNFHILRTATFARSLDLDAEVIGSH-----------TARYYLPSAILREFAAVTVEHK 311
>gi|165975946|ref|YP_001651539.1| hypothetical protein APJL_0514 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|303250279|ref|ZP_07336479.1| hypothetical protein APP6_1694 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252044|ref|ZP_07533944.1| hypothetical protein appser6_5630 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|165876047|gb|ABY69095.1| hypothetical protein APJL_0514 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|302650895|gb|EFL81051.1| hypothetical protein APP6_1694 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860513|gb|EFM92526.1| hypothetical protein appser6_5630 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 252
Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ WIF + + H L F + M + L++ ++ L
Sbjct: 23 LILWIFSL--FLHKLQFKKLSYFCTALGMTILYICSTPYFSHQLIQ--AVTFSEKLTIED 78
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+KK IV+LG G + R + R+ L+K I+++GG
Sbjct: 79 YKK-AQAIVVLGGGVRNSHELFG-RYTIAAAPLERMRYAAYLHKQ-----TGLPILVTGG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ E+ + +L +E+ S T QNA S +M+K IILV++
Sbjct: 132 SPEGR-EPEAKIMAQEL-HDFFNVSVKWVESASNTTEQNAILSKAMLKQESIDRIILVTN 189
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAY 237
+H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 190 QWHMKRTKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIGYWKEK 249
Query: 238 YRG 240
G
Sbjct: 250 LIG 252
>gi|311747747|ref|ZP_07721532.1| membrane protein [Algoriphagus sp. PR1]
gi|126575735|gb|EAZ80045.1| membrane protein [Algoriphagus sp. PR1]
Length = 256
Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 50/251 (19%), Positives = 104/251 (41%), Gaps = 21/251 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M L+ + +++ + + + ++L F I + + ++
Sbjct: 14 MPLTIVIILIVMGAVYIKRKWGKKSLWAGIILLWFFSNQFISNQAMLAWEPDFKEF---S 70
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K IVL G + A + RI ++LY+ K I+I+G
Sbjct: 71 EIKNHEIGIVLTG---VTNLSKTAYDRTFFNKGADRITHALQLYRMGKIK----KILITG 123
Query: 121 GDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KN 175
G + +E+ + L+ +GV +D+ +E ++ +T QNAQF+ + ++ +
Sbjct: 124 GQGLNPVNPQSEAELLQRFLIMTGVPPEDVMIEDKAKNTAQNAQFTKTFLEEKGINIDQE 183
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI------IPLSANFYLTELALKE 229
+L++SA+H+ RS+ F G+ T+ +DY + P ++ +KE
Sbjct: 184 FLLITSAFHMYRSKGCFDKVGLKTETFPTDYYSYDTKYDFPTFMYPSPSSIENWHKLVKE 243
Query: 230 YIGILIAYYRG 240
+IGI + G
Sbjct: 244 WIGITVYKLVG 254
>gi|307245325|ref|ZP_07527413.1| hypothetical protein appser1_5300 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254278|ref|ZP_07536118.1| hypothetical protein appser9_5280 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258738|ref|ZP_07540470.1| hypothetical protein appser11_5360 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853666|gb|EFM85883.1| hypothetical protein appser1_5300 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862757|gb|EFM94711.1| hypothetical protein appser9_5280 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867089|gb|EFM98945.1| hypothetical protein appser11_5360 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 252
Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ WIF + + H L F + M + L++ ++ L
Sbjct: 23 LILWIFSL--FLHKLQFKKLSYFCTALGMTILYICSTPYFSHQLIQ--AVTFSEKLTIED 78
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+KK IV+LG G + R + R+ L+K I+++GG
Sbjct: 79 YKK-AQAIVVLGGGVRNSHELFG-RYTIAAAPLERMRYAAYLHKQ-----TGLPILVTGG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ E+ + +L +E+ S T QNA S +M+K IILV++
Sbjct: 132 SPEGR-EPEAKIMAQEL-HDFFNVSVKWVESASNTTEQNAILSKAMLKQESIDRIILVTN 189
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAY 237
+H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 190 QWHMKRTKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIGSWKEK 249
Query: 238 YRG 240
G
Sbjct: 250 LIG 252
>gi|299822466|ref|ZP_07054352.1| conserved domain protein [Listeria grayi DSM 20601]
gi|299815995|gb|EFI83233.1| conserved domain protein [Listeria grayi DSM 20601]
Length = 339
Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 44/243 (18%), Positives = 107/243 (44%), Gaps = 30/243 (12%)
Query: 3 LSWIFLIVSYWHLLCQS--IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + +++ +L + +++ +++ + ++ LL + + Y P L
Sbjct: 103 FAVLIIVIGVLTVLLAHPDTWLENIVLGLLIIIAYVTFLLVS-FLLSTIIYQYNGPRL-- 159
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK-SCKQHSMHCTIIIS 119
+ + I++LG G + +R+ + ++ ++ K+ T I+S
Sbjct: 160 ----NKDFIIVLGCGLKGKKVPQLL--------ANRLDKAIQFHRKQQKKRGRTATFIVS 207
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIIL 178
GG +AE+ L++ G+ ++ I +E S +T +N QFS ++ ++Q +
Sbjct: 208 GGKGPNEEIAEARAMQAYLIDKGIPKEQIFMEADSTNTEENMQFSKKLMTSIQKNFKSVF 267
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V++ +HL R+ +Y + G++ + +A +YL L+E+I +L Y
Sbjct: 268 VTNNFHLFRASIYARKAGLDAQGIGG-----------KTALYYLPTALLREFIAVLFLYR 316
Query: 239 RGN 241
+ +
Sbjct: 317 KAH 319
>gi|330984301|gb|EGH82404.1| hypothetical protein PLA107_04649 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 244
Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 13/220 (5%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK---KDGNIIVLLGNGTT 77
R + ++ L ++G T LL + R + Q D +IV+LG G
Sbjct: 18 RWLKILAVGASLALYVG----GTGLLNSAIERWARGGEAQQHTSAFADKQLIVVLGLGVE 73
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
P + + R+ + + +Y+ C+ S CT++ISGG + L E+ VY ++
Sbjct: 74 FQDGKPVVPTY----ALPRLLKAIEVYRDCQTVS-QCTLLISGGPTGETTLTEAEVYQDR 128
Query: 138 LLESGVE-RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+L S + I+LE +S +T++NA+FSSS K LV+S H++RSQ YF HF
Sbjct: 129 ILHSAPDLAGHIELEAKSRNTWENARFSSSWAKAHGYGQARLVTSLLHMRRSQSYFAHFD 188
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
T S+ + S +P + N + E+ + E IG+
Sbjct: 189 FPTSPEYSEQVVGPTSWLPSAWNLAMVEVLIHEQIGLWRY 228
>gi|302392084|ref|YP_003827904.1| hypothetical protein Acear_1326 [Acetohalobium arabaticum DSM 5501]
gi|302204161|gb|ADL12839.1| protein of unknown function DUF218 [Acetohalobium arabaticum DSM
5501]
Length = 264
Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGN--IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
+L K L+ + L+S + K GN IVLLG+G + E +
Sbjct: 69 LLTKPLESQFDPLLISNRESKVGNSTAIVLLGSGVRRGTSRGVEIGEITL---------A 119
Query: 102 RLYKSCKQHS-MHCTIIISGGDPQKHGL------AESIVYNNKLLESGVERDDIKLETQS 154
RLY++ + H +++SGG + + + V LL+ GV+ D I LE ++
Sbjct: 120 RLYRTWQIHKETGLDLVVSGGV-----VPGADNTSGAEVMKEVLLDLGVKEDKIILEKKA 174
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYL----NA 209
+T+QNA ++ +++ + + IILV+SA H+KR+ F+ + ++Y +
Sbjct: 175 KNTWQNAVNTALLLEEREYEQIILVTSALHMKRAVYSFERNCNQRLIPAPANYTFNTDVS 234
Query: 210 YYSIIPLSANFYLTELALKEYIGILIA 236
+P + + AL E+IG++
Sbjct: 235 LLDYLPNRESLDNSLAALHEWIGLVWY 261
>gi|227518630|ref|ZP_03948679.1| integral membrane protein [Enterococcus faecalis TX0104]
gi|227553161|ref|ZP_03983210.1| integral membrane protein [Enterococcus faecalis HH22]
gi|229545952|ref|ZP_04434677.1| integral membrane protein [Enterococcus faecalis TX1322]
gi|229550144|ref|ZP_04438869.1| integral membrane protein [Enterococcus faecalis ATCC 29200]
gi|293383072|ref|ZP_06628990.1| putative membrane protein [Enterococcus faecalis R712]
gi|293387775|ref|ZP_06632319.1| putative membrane protein [Enterococcus faecalis S613]
gi|294779558|ref|ZP_06744952.1| putative membrane protein [Enterococcus faecalis PC1.1]
gi|300860460|ref|ZP_07106547.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|307271145|ref|ZP_07552428.1| hypothetical protein HMPREF9498_03231 [Enterococcus faecalis
TX4248]
gi|307288139|ref|ZP_07568149.1| hypothetical protein HMPREF9505_01545 [Enterococcus faecalis
TX0109]
gi|307291350|ref|ZP_07571234.1| hypothetical protein HMPREF9509_01659 [Enterococcus faecalis
TX0411]
gi|312900627|ref|ZP_07759924.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|312907338|ref|ZP_07766329.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|312909955|ref|ZP_07768803.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|312952369|ref|ZP_07771244.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|227073925|gb|EEI11888.1| integral membrane protein [Enterococcus faecalis TX0104]
gi|227177687|gb|EEI58659.1| integral membrane protein [Enterococcus faecalis HH22]
gi|229304730|gb|EEN70726.1| integral membrane protein [Enterococcus faecalis ATCC 29200]
gi|229308915|gb|EEN74902.1| integral membrane protein [Enterococcus faecalis TX1322]
gi|291079737|gb|EFE17101.1| putative membrane protein [Enterococcus faecalis R712]
gi|291082845|gb|EFE19808.1| putative membrane protein [Enterococcus faecalis S613]
gi|294453348|gb|EFG21756.1| putative membrane protein [Enterococcus faecalis PC1.1]
gi|300849499|gb|EFK77249.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|306497581|gb|EFM67114.1| hypothetical protein HMPREF9509_01659 [Enterococcus faecalis
TX0411]
gi|306500875|gb|EFM70193.1| hypothetical protein HMPREF9505_01545 [Enterococcus faecalis
TX0109]
gi|306512643|gb|EFM81292.1| hypothetical protein HMPREF9498_03231 [Enterococcus faecalis
TX4248]
gi|310626366|gb|EFQ09649.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|310629753|gb|EFQ13036.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|311289913|gb|EFQ68469.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|311292108|gb|EFQ70664.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|315027393|gb|EFT39325.1| conserved hypothetical protein [Enterococcus faecalis TX2137]
gi|315033767|gb|EFT45699.1| conserved hypothetical protein [Enterococcus faecalis TX0017]
gi|315036853|gb|EFT48785.1| conserved hypothetical protein [Enterococcus faecalis TX0027]
gi|315147862|gb|EFT91878.1| conserved hypothetical protein [Enterococcus faecalis TX4244]
gi|315150660|gb|EFT94676.1| conserved hypothetical protein [Enterococcus faecalis TX0012]
gi|315153332|gb|EFT97348.1| conserved hypothetical protein [Enterococcus faecalis TX0031]
gi|315155890|gb|EFT99906.1| conserved hypothetical protein [Enterococcus faecalis TX0043]
gi|315157942|gb|EFU01959.1| conserved hypothetical protein [Enterococcus faecalis TX0312]
gi|315164245|gb|EFU08262.1| conserved hypothetical protein [Enterococcus faecalis TX1302]
gi|315166661|gb|EFU10678.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
gi|315170055|gb|EFU14072.1| conserved hypothetical protein [Enterococcus faecalis TX1342]
gi|315575579|gb|EFU87770.1| conserved hypothetical protein [Enterococcus faecalis TX0309B]
gi|315579979|gb|EFU92170.1| conserved hypothetical protein [Enterococcus faecalis TX0309A]
gi|323480601|gb|ADX80040.1| conserved hypothetical protein [Enterococcus faecalis 62]
gi|327535007|gb|AEA93841.1| integral membrane protein [Enterococcus faecalis OG1RF]
Length = 401
Score = 139 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 37/237 (15%)
Query: 10 VSYWHLLCQSIRKIFFMSCFML---LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ LL + ++ F+L F F + + T+ + + +P K
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAFVFYNFLTVSTL------YQFNQP------KYTQ 218
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIISGGDPQK 125
+ IV+LG+G +P + +RI + ++ YK+ + +++ I++SGG
Sbjct: 219 DYIVVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPD 271
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNI--ILVSSA 182
L ES+ L G+ DDI +E S +T +N +FS MI++ N I ++
Sbjct: 272 ELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNN 331
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R+ L+ + G+ + +A ++L ++E+I I++ Y R
Sbjct: 332 YHLFRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMYKR 377
>gi|307277497|ref|ZP_07558589.1| hypothetical protein HMPREF9521_03090 [Enterococcus faecalis
TX2134]
gi|306505762|gb|EFM74940.1| hypothetical protein HMPREF9521_03090 [Enterococcus faecalis
TX2134]
Length = 401
Score = 139 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 37/237 (15%)
Query: 10 VSYWHLLCQSIRKIFFMSCFML---LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ LL + ++ F+L F F + + T+ + + +P K
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAFIFYNFLTVSTL------YQFNQP------KYTQ 218
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIISGGDPQK 125
+ IV+LG+G +P + +RI + ++ YK+ + +++ I++SGG
Sbjct: 219 DYIVVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPD 271
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNI--ILVSSA 182
L ES+ L G+ DDI +E S +T +N +FS MI++ N I ++
Sbjct: 272 ELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNN 331
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R+ L+ + G+ + +A ++L ++E+I I++ Y R
Sbjct: 332 YHLFRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMYKR 377
>gi|115525420|ref|YP_782331.1| hypothetical protein RPE_3419 [Rhodopseudomonas palustris BisA53]
gi|115519367|gb|ABJ07351.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisA53]
Length = 267
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 21/249 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ + + L ++ + L G+ + LL L + P W
Sbjct: 19 IALVCAFGAVLALTRWRRAGSRILALGIGLLLVAGYSPLGNALLLVLTERF------PSW 72
Query: 63 KKDGNI---IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ +G IV+LG G+ A + S R+F + L + + I+ +
Sbjct: 73 QAEGRAPDGIVVLG-GSIDSDISAARNALETDASAERVFAMLDLARRY----PNARIVFT 127
Query: 120 GGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
GG AE+ V L + G+ D I LE+ S T +NA + ++ G+ +
Sbjct: 128 GGSANLIGDTAAEAPVAGQLLEQFGIAPDRIVLESGSRTTAENATMTRDLVAPKPGERWL 187
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIG 232
LV+SA+H+ RS F+ G +A D+ + LSA ++A+ E++G
Sbjct: 188 LVTSAFHMPRSIGVFRAIGFEVEAYPVDWRTRGWIDLRWPFGKLSAGLARIDVAVHEWVG 247
Query: 233 ILIAYYRGN 241
++ G
Sbjct: 248 LIAYRLTGR 256
>gi|298291473|ref|YP_003693412.1| hypothetical protein Snov_1483 [Starkeya novella DSM 506]
gi|296927984|gb|ADH88793.1| protein of unknown function DUF218 [Starkeya novella DSM 506]
Length = 274
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 44/234 (18%), Positives = 95/234 (40%), Gaps = 20/234 (8%)
Query: 19 SIRKIFFMSCFMLLFSFI--GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R++ + + + G I +L+ L+ + + + +++LG
Sbjct: 32 WFRRLGTVLTVLGGVGLLVAGLSPIGRMLMVPLENRFPAYV---DEGSPVDGVIVLGG-- 86
Query: 77 TIIPTIPAIRIEPSF-QSYSRIFETMRLYKSCKQHSMHCTIIISGGD---PQKHGLAESI 132
+ I A R + SF ++ R+ L + I+ +GG + + E+
Sbjct: 87 AELAGITAARGQSSFQEAGERMLAMGELARRY----PGARIVFAGGSSNLVEASPMQEAD 142
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
V L + GV+ ++ E S +T +NA+ + ++K + +LV+SA+H+ R+ F
Sbjct: 143 VVRLALPQIGVDPARVEFERYSRNTAENARLARELVKPQPDQRWLLVTSAFHMPRAIGCF 202
Query: 193 QHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ G DY + ++ +LA +E++G++ Y G
Sbjct: 203 RAAGFPVIPYPVDYRTIGRPELFRLFGTVADGLSFVDLATREWMGLVAYYLAGR 256
>gi|74316470|ref|YP_314210.1| transmembrane protein [Thiobacillus denitrificans ATCC 25259]
gi|74055965|gb|AAZ96405.1| probable transmembrane protein [Thiobacillus denitrificans ATCC
25259]
Length = 251
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 52/248 (20%), Positives = 98/248 (39%), Gaps = 18/248 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFML---LFSFIGWGIIPTILLKHLQFSYQRPL 57
+L +IV + + MS ++ + + +LLK L+ S
Sbjct: 14 LLPPLSLVIVLGAGIAIRRRNPRLAMSLILVSTAALYALSTPWVGGLLLKSLEISVPVDP 73
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
Q + IV+L G + S R+ +RL+++ ++
Sbjct: 74 ARLQ----ADAIVVLSGGRRMASREYGGDTLNGI-SLERLRYAVRLHRA-----TGLPLL 123
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
++GG+P LAE + L + +E +L T+ NA+ S+ ++K I
Sbjct: 124 VTGGNPGGGTLAEGQILAQVLRDDYGIEPR-WVEDAALTTWDNARLSAPLLKKSGVHRIA 182
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGI 233
LV+ A+HL+R+ F+ + + + L+ ++P A + AL E++GI
Sbjct: 183 LVTHAWHLRRAVPLFEAQELEVIPAGIQFASTDLDRILDLLPTPAGLRDSSFALHEWLGI 242
Query: 234 LIAYYRGN 241
L R N
Sbjct: 243 LWYKLRSN 250
>gi|167724440|ref|ZP_02407676.1| hypothetical protein BpseD_35802 [Burkholderia pseudomallei DM98]
Length = 143
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 49/127 (38%), Positives = 80/127 (62%)
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
C I++SGGD +++G+ E+ VY + L+ G++ D+ E +S++T+QNAQF+ +
Sbjct: 1 ADCKILVSGGDARRNGVPEASVYRDALVGVGIDAADVLSEPRSMNTWQNAQFTRVALDGY 60
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
+ ++LV+S HL+RS LYF HFG+ A ++YL A +PL+ NF + +LAL EY+
Sbjct: 61 RADRVLLVTSGIHLRRSMLYFAHFGVAAIAVRAEYLQAVTFPLPLAYNFAIADLALHEYL 120
Query: 232 GILIAYY 238
GI
Sbjct: 121 GIARYRL 127
>gi|29375933|ref|NP_815087.1| hypothetical protein EF1366 [Enterococcus faecalis V583]
gi|256853003|ref|ZP_05558373.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256958856|ref|ZP_05563027.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256962050|ref|ZP_05566221.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|257078888|ref|ZP_05573249.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|257082665|ref|ZP_05577026.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|257086869|ref|ZP_05581230.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|257415976|ref|ZP_05592970.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
gi|257419178|ref|ZP_05596172.1| predicted protein [Enterococcus faecalis T11]
gi|257422744|ref|ZP_05599734.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|29343395|gb|AAO81157.1| conserved hypothetical protein [Enterococcus faecalis V583]
gi|256711462|gb|EEU26500.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256949352|gb|EEU65984.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256952546|gb|EEU69178.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256986918|gb|EEU74220.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|256990695|gb|EEU77997.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|256994899|gb|EEU82201.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|257157804|gb|EEU87764.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
gi|257161006|gb|EEU90966.1| predicted protein [Enterococcus faecalis T11]
gi|257164568|gb|EEU94528.1| conserved hypothetical protein [Enterococcus faecalis X98]
Length = 359
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 37/237 (15%)
Query: 10 VSYWHLLCQSIRKIFFMSCFML---LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ LL + ++ F+L F F + + T+ + + +P K
Sbjct: 129 FFFQSLLPTWLSLPLTIAPFILTYFAFVFYNFLTVSTL------YQFNQP------KYTQ 176
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIISGGDPQK 125
+ IV+LG+G +P + +RI + ++ YK+ + +++ I++SGG
Sbjct: 177 DYIVVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPD 229
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNI--ILVSSA 182
L ES+ L G+ DDI +E S +T +N +FS MI++ N I ++
Sbjct: 230 ELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNN 289
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R+ L+ + G+ + +A ++L ++E+I I++ Y R
Sbjct: 290 YHLFRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMYKR 335
>gi|237808220|ref|YP_002892660.1| hypothetical protein Tola_1459 [Tolumonas auensis DSM 9187]
gi|237500481|gb|ACQ93074.1| protein of unknown function DUF218 [Tolumonas auensis DSM 9187]
Length = 251
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 51/230 (22%), Positives = 95/230 (41%), Gaps = 21/230 (9%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
Q K+ +LL +F + L + L+ Y + + I++LG+G
Sbjct: 35 WQKSGKLLVSVATLLLVTF-SLRPVSVGLNRPLEQLYPPFPE----GQTVDFIIVLGHGH 89
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
P++P + + + + +RI E +R+ + + M I SG ++ + +Y
Sbjct: 90 VSDPSVP-LNSQLTEAASARIQEALRIKRLNPKAHM----IFSG-SIAGDPVSGAQMYAR 143
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+G+ R+D+ L + DT + S +I N LV+SA H+ R+ F+
Sbjct: 144 VAEANGISRNDMTLIENARDTEEEVALDSQLISNHPTA---LVTSASHMPRAMSLFRDTA 200
Query: 197 INTKASCSDYLN-------AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
N + + Y+ Y +P +E+AL E+IG L R
Sbjct: 201 ANVIPAPAQYVGRLVQGDIPLYGYLPSGRYLMYSEMALHEWIGTLWNRIR 250
>gi|306844381|ref|ZP_07476971.1| protein of unknown function DUF218 [Brucella sp. BO1]
gi|306275194|gb|EFM56944.1| protein of unknown function DUF218 [Brucella sp. BO1]
Length = 263
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 4/236 (1%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L + L+V + + + + ++ + I +P L+ LQ Y L P
Sbjct: 5 LITVLLVVGVFLWWGKWRKTGVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP- 63
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 64 -LEDNTVFVVFGLGTQTVNEQGHNIVEPLAFSYGSIFAAARFYHECQSSGISCTFITTGA 122
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ + ++++
Sbjct: 123 DVAGTGVSEAASAAAELEKAGVDSQAIIQDDKPRNAWTTARNVAATLRELKPERVVVLQP 182
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL S S +F +LAL E IG
Sbjct: 183 APMMGRTLLYLAHFGIKPEPVATSYLTVNASTHFSTSLSFLAMDLALHEEIGAWRY 238
>gi|306842605|ref|ZP_07475254.1| protein of unknown function DUF218 [Brucella sp. BO2]
gi|306287250|gb|EFM58738.1| protein of unknown function DUF218 [Brucella sp. BO2]
Length = 263
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 4/236 (1%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L + L+V + + + + ++ + I +P L+ LQ Y L P
Sbjct: 5 LITVLLVVGVFLWWGKWRKTGVLLIALAVISYGAIVSTWLPNFLMNRLQEPYSSKLAEP- 63
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+D + V+ G GT + +EP SY IF R Y C+ + CT I +G
Sbjct: 64 -LEDNTVFVVFGLGTQTVNEQGHNTVEPLAFSYGSIFAAARFYHECQSSGISCTFITTGA 122
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D G++E+ +L ++GV+ I + + + + A+ ++ ++ ++ ++++
Sbjct: 123 DVAGTGVSEAASAAAELEKAGVDSQAIIQDDKPRNAWTTARNVAATLRELKPARVVVLQP 182
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-IPLSANFYLTELALKEYIGILIA 236
A + R+ LY HFGI + + YL S S +F +LAL E IG
Sbjct: 183 APMMGRTLLYLAHFGIKPEPVATSYLTVNASTHFSTSLSFLAMDLALHEEIGAWRY 238
>gi|330811913|ref|YP_004356375.1| hypothetical protein PSEBR_a4949 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380021|gb|AEA71371.1| Conserved hypothetical protein; putative membrane protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 253
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 40/233 (17%), Positives = 89/233 (38%), Gaps = 17/233 (7%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK---KDGNI 68
+W + + + F + ++ K L+ + PLL +W + +
Sbjct: 25 WWWRHSRPRLARLCFAVGLGGFWLMSLPVVVQWSAKALER--EPPLLRSEWATLAQRADA 82
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG+G +P+ R RL K ++ +GG
Sbjct: 83 IVVLGSGRERGDLAWGA-DQPTGVGLERQRYAARLAK-----VSGLPVLTTGGLHYGTPP 136
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+E+ + + +L+ + E +S T++NAQ S+ ++ K +++++ A+H+ RS
Sbjct: 137 SEAKLMADSMLD-DFGVNVRWQEGRSRTTWENAQMSAEILLPEGIKRVVVITQAWHMPRS 195
Query: 189 QLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA 236
F+ G + +L +P + + + + E G++
Sbjct: 196 VWSFERAGFEVVPAPVGFLGQDNARPLGGWMPEFKSIWQSGQLMNEAAGLVGY 248
>gi|255036862|ref|YP_003087483.1| hypothetical protein Dfer_3103 [Dyadobacter fermentans DSM 18053]
gi|254949618|gb|ACT94318.1| protein of unknown function DUF218 [Dyadobacter fermentans DSM
18053]
Length = 256
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 19/250 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS- 59
M +S +FL++ Y L+ ++ + + ++L + + L++ Y+ PL++
Sbjct: 14 MPMSMLFLLLIYAFLVKNRRKQKWVIGLVIVLMYLMSN----SFLVRAALNWYEAPLVNI 69
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
++ ++ +LL G +P R+ +T LYK+ K I+I+
Sbjct: 70 SDIRETYDVGILLSGGLANTD-MPDADHALMGDRGDRVLQTFLLYKAGKIR----KILIT 124
Query: 120 GGDPQK---HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-N 175
G E+ L++ GV DI E ++ +T QNA S+ +++ M
Sbjct: 125 GASADDAMAGKRGETKTAAALLVQWGVPAGDIVFEEKAKNTRQNALNSAQILRKMFPSGK 184
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-----IPLSANFYLTELALKEY 230
IL++SA+H++RS F+ GI TK +D+ Y + IP + + E
Sbjct: 185 YILITSAFHMRRSVGCFEKAGIKTKPFPADFYGGYGELTVRKMIPEPSALDSFNVLWHEM 244
Query: 231 IGILIAYYRG 240
+G +I G
Sbjct: 245 VGFVIYKIMG 254
>gi|220935563|ref|YP_002514462.1| integral membrane protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219996873|gb|ACL73475.1| integral membrane protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 250
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 51/249 (20%), Positives = 108/249 (43%), Gaps = 27/249 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKI-----FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR 55
+L S + ++ L+ R++ ++ +++ G G + LL L++ Y
Sbjct: 9 VLPSGLLVLCLAGALVLSPWRRMRPGAAGLVALAAVIYLVFGSGPVAHALLGGLEYRYPA 68
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
P P+ + IV+L ++ + + + R+ E L + + +
Sbjct: 69 PENMPEL----DHIVVL-AAYGAHDPRVSVINQVNSHALIRLVEASLLAREHPEAILT-- 121
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+ GG+ K + + L+ GV I++E S +TF++A + +K+ +
Sbjct: 122 -VTGGGEVPK-------LMADVLIVLGVPESRIRVEALSSNTFESALHLQAELKD---QR 170
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI----IPLSANFYLTELALKEYI 231
LV+SA H+ R+ + F+ G+ + +DYL+ + N L++LA+ EYI
Sbjct: 171 FALVTSAGHMSRAMMVFRGQGLEPIPAPTDYLSFADIWSAQIMAKPGNLLLSDLAIHEYI 230
Query: 232 GILIAYYRG 240
++ +RG
Sbjct: 231 ALVWYRWRG 239
>gi|255972921|ref|ZP_05423507.1| predicted protein [Enterococcus faecalis T1]
gi|256762373|ref|ZP_05502953.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|255963939|gb|EET96415.1| predicted protein [Enterococcus faecalis T1]
gi|256683624|gb|EEU23319.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|315030014|gb|EFT41946.1| conserved hypothetical protein [Enterococcus faecalis TX4000]
Length = 366
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 37/237 (15%)
Query: 10 VSYWHLLCQSIRKIFFMSCFML---LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ LL + ++ F+L F F + + T+ + + +P K
Sbjct: 136 FFFQSLLPTWLSLPLTIAPFILTYFAFVFYNFLTVSTL------YQFNQP------KYTQ 183
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIISGGDPQK 125
+ IV+LG+G +P + +RI + ++ YK+ + +++ I++SGG
Sbjct: 184 DYIVVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPD 236
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNI--ILVSSA 182
L ES+ L G+ DDI +E S +T +N +FS MI++ N I ++
Sbjct: 237 ELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNN 296
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R+ L+ + G+ + +A ++L ++E+I I++ Y R
Sbjct: 297 YHLFRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMYKR 342
>gi|319947009|ref|ZP_08021243.1| hypothetical protein HMPREF9421_1424 [Streptococcus australis ATCC
700641]
gi|319747057|gb|EFV99316.1| hypothetical protein HMPREF9421_1424 [Streptococcus australis ATCC
700641]
Length = 342
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 49/242 (20%), Positives = 108/242 (44%), Gaps = 31/242 (12%)
Query: 2 LLSWIFLIVSYW-HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
LL IF+I + H L K + + + + +L +
Sbjct: 102 LLYGIFIIGALALHFLPDFPGKDILIYPTDFALFYSTFLYLSYVLYGTFCNYFPV----- 156
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+K+ + I++LG+G P + R+ + +Y+ + +I+SG
Sbjct: 157 --RKEPDAIIVLGSGLIGDKVPPLL--------AQRLTKGKAIYEQFEGR---PKLIVSG 203
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILV 179
G +E+ N L+E GV ++DI +E +S TF+N FS +++++ GK++++V
Sbjct: 204 GQGADELTSEATAMANYLIEQGVPKEDILIENRSRTTFENLTFSKAILEDQGLGKSVLVV 263
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++++H R+ ++ + I ++ S +A +YL ++E +G++ Y++
Sbjct: 264 TNSFHALRAGVFMRRLKIPGRSVGS-----------KTAFYYLPSAWIRETVGLVSLYWK 312
Query: 240 GN 241
+
Sbjct: 313 WH 314
>gi|307273352|ref|ZP_07554597.1| hypothetical protein HMPREF9514_02117 [Enterococcus faecalis
TX0855]
gi|306509879|gb|EFM78904.1| hypothetical protein HMPREF9514_02117 [Enterococcus faecalis
TX0855]
Length = 401
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 104/237 (43%), Gaps = 37/237 (15%)
Query: 10 VSYWHLLCQSIRKIFFMSCFML---LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ LL + ++ F+L F F + + T+ + + +P +
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAFVFYNFLTVSTL------YQFNQP------RYTQ 218
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIISGGDPQK 125
+ IV+LG+G +P + +RI + ++ YK+ + +++ I++SGG
Sbjct: 219 DYIVVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPD 271
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNI--ILVSSA 182
L ES+ L G+ DDI +E S +T +N +FS MI++ N I ++
Sbjct: 272 ELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNN 331
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R+ L+ + G+ + +A ++L ++E+I I++ Y R
Sbjct: 332 YHLFRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMYKR 377
>gi|312904109|ref|ZP_07763277.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|310632585|gb|EFQ15868.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|315578454|gb|EFU90645.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
Length = 401
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 104/237 (43%), Gaps = 37/237 (15%)
Query: 10 VSYWHLLCQSIRKIFFMSCFML---LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ LL + ++ F+L F F + + T+ + + +P +
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAFVFYNFLTVSTL------YQFNQP------RYTQ 218
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIISGGDPQK 125
+ IV+LG+G +P + +RI + ++ YK+ + +++ I++SGG
Sbjct: 219 DYIVVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPD 271
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNI--ILVSSA 182
L ES+ L G+ DDI +E S +T +N +FS MI++ N I ++
Sbjct: 272 ELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNN 331
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R+ L+ + G+ + +A ++L ++E+I I++ Y R
Sbjct: 332 YHLFRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMYKR 377
>gi|223933030|ref|ZP_03625024.1| protein of unknown function DUF218 [Streptococcus suis 89/1591]
gi|302023799|ref|ZP_07249010.1| membrane protein [Streptococcus suis 05HAS68]
gi|330832826|ref|YP_004401651.1| hypothetical protein SSUST3_1032 [Streptococcus suis ST3]
gi|223898347|gb|EEF64714.1| protein of unknown function DUF218 [Streptococcus suis 89/1591]
gi|329307049|gb|AEB81465.1| protein of unknown function DUF218 [Streptococcus suis ST3]
Length = 336
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 45/234 (19%), Positives = 97/234 (41%), Gaps = 25/234 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + Y + ++ + +S ++F ++G+ + I++ L + +
Sbjct: 102 MGLAVALTFYLFIAPFVVQSLSGISLLNMVFVYVGFLVSYAIIISMLYTTSSFVNFVNLF 161
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ +V+LG G P + SRI + + +Y+ +I+SGG
Sbjct: 162 PGKLDYVVVLGAGLIGDKVTPLL--------ASRIDKGIAIYQKQ----PGSKLIMSGGQ 209
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+AE N LE G+ +DI +E QS +T +N +FS +++K G LV++
Sbjct: 210 GPDELIAEGQAMANYALEQGIPAEDIIIENQSTNTEENLKFSYALMK--PGSRFALVTNY 267
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
YH+ R+ L + I + + ++ ++E++G ++
Sbjct: 268 YHVFRALLLARQLKIKCIGYGA-----------KTKFYFSLNAFIREFVGYVVM 310
>gi|307256540|ref|ZP_07538321.1| hypothetical protein appser10_5450 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306864950|gb|EFM96852.1| hypothetical protein appser10_5450 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 252
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 96/243 (39%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ WIF + + H L F + M + L++ ++ L
Sbjct: 23 LILWIFSL--FLHKLQFKKLSYFCTALGMTILYICSTPYFSHQLIQ--AVTFSEKLTIED 78
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+KK IV+LG G + R + R+ L+K I+ +GG
Sbjct: 79 YKK-AQAIVVLGGGVRNSHELFG-RYAIAAAPLERMRYAAYLHKQ-----TGLPILATGG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ E+ + +L +E+ S T QNA S +M+K IILV++
Sbjct: 132 SPEGR-EPEAKIMAQEL-HDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDRIILVTN 189
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAY 237
+H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 190 QWHMKRTKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIGYWKEK 249
Query: 238 YRG 240
G
Sbjct: 250 LIG 252
>gi|146292475|ref|YP_001182899.1| hypothetical protein Sputcn32_1372 [Shewanella putrefaciens CN-32]
gi|145564165|gb|ABP75100.1| protein of unknown function DUF218 [Shewanella putrefaciens CN-32]
gi|319425777|gb|ADV53851.1| protein of unknown function DUF218 [Shewanella putrefaciens 200]
Length = 231
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 47/240 (19%), Positives = 104/240 (43%), Gaps = 12/240 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M + +I L++ + + + ++ +L F+ + + L++ L+ Y ++
Sbjct: 1 MPIPFILLLLLVSLFIWRRTMAKYLVASAFILLLFLSSQLSVSTLVRPLESIYP---INS 57
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++LG+ + I A++ S + +R+ E +R C +I+SG
Sbjct: 58 TPISGQCFVMVLGSSHSDIQAATAVQ-SLSAVALARLSEGIR----QLGLGQDCILIVSG 112
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ ++ + + +E GV++ I + DT + AQ+ + + LV+
Sbjct: 113 WGGELTQISHAEMMAKAAVELGVDKSKIIQFPLARDTLEEAQYLKW---ELGDSSFRLVT 169
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA-NFYLTELALKEYIGILIAYYR 239
SA H+ R+ F G+ A+ +D+ L+A N ++ A+ EYIG L + +
Sbjct: 170 SASHMPRAMAIFTGKGLLASAAPTDFRARDDFWWRLTADNLVSSQRAIHEYIGRLWLWIK 229
>gi|312963224|ref|ZP_07777708.1| protein of unknown function DUF218 [Pseudomonas fluorescens WH6]
gi|311282490|gb|EFQ61087.1| protein of unknown function DUF218 [Pseudomonas fluorescens WH6]
Length = 253
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 39/232 (16%), Positives = 83/232 (35%), Gaps = 16/232 (6%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQW---KKDGNIIVL 71
+ R CF L + +P ++ + PL +W + + IV+
Sbjct: 26 WFRRSRPRLAGCCFALGLGGMWLISLPVMVEWGARVLETEPPLAREEWSTLAQRADAIVV 85
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG+G +P+ R RL K+ ++ SGG +E+
Sbjct: 86 LGSGRERGDPAWGA-DQPTGIGLERQRYAARLAKAS-----GLPVLTSGGLHYGTPPSEA 139
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ ++ E +S T++NA+ S+ ++ K +++V+ A+H+ R+
Sbjct: 140 QLMA-VSMQDDFGVTVRWKEERSRTTWENARMSAEILLPEGIKRVVVVTQAWHMSRAVWS 198
Query: 192 FQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
F+ G + +L +P + + + + E +G
Sbjct: 199 FEKAGFTVVPAPVGFLGVDNARPLGGWMPEFKSVWQSGQLINEAVGQTGYRL 250
>gi|317968461|ref|ZP_07969851.1| hypothetical protein SCB02_02886 [Synechococcus sp. CB0205]
Length = 266
Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 50/240 (20%), Positives = 91/240 (37%), Gaps = 27/240 (11%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+ + S +++ F I L+ L+ L+P+ + + +V+LG G
Sbjct: 34 RLSRALGASGIAMVWLF-AMPITSRQLIWGLEER--AAALTPKTIPNADAVVVLGGGLK- 89
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD----PQKHGLAESIVY 134
P +P R + R+ +RL T++ SG AE+
Sbjct: 90 -PALPPRRGVEVSEGGDRLLTGVRL----MSQKKAGTLVTSGAQISFTAADPAPAEAFSA 144
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF-Q 193
E GV I S T + A+ + K ++LV+SA+H+ RS F +
Sbjct: 145 KALAEELGVPSQRIVPNPLSKTTAEEARDIGQLAKQRGWSQVLLVTSAFHMPRSLATFQR 204
Query: 194 HFGINTKASCSDYLNA-------------YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G+ D+L ++P + YL+ +ALKE++G+ + +G
Sbjct: 205 RSGLQVIPVACDFLLPERQRLGSPTPGSLVQDLLPSAEALYLSSVALKEHLGLALYRLKG 264
>gi|302039339|ref|YP_003799661.1| hypothetical protein NIDE4067 [Candidatus Nitrospira defluvii]
gi|300607403|emb|CBK43736.1| conserved protein of unknown function DUF218 [Candidatus Nitrospira
defluvii]
Length = 270
Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 81/213 (38%), Gaps = 23/213 (10%)
Query: 42 PTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
+ + L+ Y P P + +V+L G E S S R
Sbjct: 67 SLVYIALLETQY--PSFLPASASKFDAVVVLAGG-VFQKGSLRPADEVSDASRQRTSCGT 123
Query: 102 RLYKSCKQHSMHCTIIISGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
L+K ++ ++++GGD + GL ES + GV I E QS T++
Sbjct: 124 DLWKQ----NLAPKLLLTGGDATVFRTGLMESHEMKRWAIRLGVPESAILTEEQSRTTYE 179
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-----------LN 208
NA + SM+ I+LV++AYHL R+ F+ G +
Sbjct: 180 NAVQTKSML---GSGRILLVTAAYHLPRAVRLFEKQGFVVTPFPCGFESQHTPQQAWEQA 236
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ +P + +T A+ E GI++ + G
Sbjct: 237 TLFDFLPTAKALLITSQAVDEVAGIIVYWLAGK 269
>gi|316933607|ref|YP_004108589.1| hypothetical protein Rpdx1_2264 [Rhodopseudomonas palustris DX-1]
gi|315601321|gb|ADU43856.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
DX-1]
Length = 264
Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 22/249 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ ++ + L+++ W +++ + G+ + +LL L Y P
Sbjct: 22 ICVAGLVLLLTRWRRAGRALLIGGVVLL-----LIAGYSPLGNVLLLSLSERY--PPWHD 74
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS-YSRIFETMRLYKSCKQHSMHCTIIIS 119
+ IIVL G I + A R + R+ T+ L + I+ S
Sbjct: 75 TGRAPDGIIVLGGA---INSEVSAARNTVELDASAERVLATLDLARRY----PQARIVYS 127
Query: 120 GGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
GG + AE+ + L G+ + LE QS T +NA + +++ G+ +
Sbjct: 128 GGSGNLIQRSAAEAPLAGELLERFGLAAGRVVLEDQSRTTAENAANTRALVSPKPGELWL 187
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIG 232
LV+S++H+ RS + FQ G + A D+ L+A T++A E+ G
Sbjct: 188 LVTSSFHMPRSIMAFQAAGFDVVAYPVDWRTRGREDVALPFATLAAGLARTDVAAHEWAG 247
Query: 233 ILIAYYRGN 241
+L G
Sbjct: 248 LLAYRLGGK 256
>gi|119502798|ref|ZP_01624883.1| hypothetical protein MGP2080_05817 [marine gamma proteobacterium
HTCC2080]
gi|119461144|gb|EAW42234.1| hypothetical protein MGP2080_05817 [marine gamma proteobacterium
HTCC2080]
Length = 236
Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 18/242 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLL I +I + + + + + F++++ F L++ L+ + P SP
Sbjct: 1 MLLLLIAVISG--AIGRRGLSWLMTLLGFLVIY-FPATEFGSEALMQPLEGRH--PAFSP 55
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IVLLG + R + R+ LY + K I+ISG
Sbjct: 56 EELPAAQAIVLLGGASNGAARFG--RGADLNDAADRVMFAAELYFAGK----APIILISG 109
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P+ E+ + +L + R + LETQS TF NA + M+KN ++I+LV+
Sbjct: 110 GAPE-TMQPEAELLAQQLQALQIPRKQLLLETQSRTTFDNAVMAGEMLKNAGLQHILLVT 168
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIGIL 234
S H++RS F+ G+ A+ +D+ +S IP A + A+ E++G
Sbjct: 169 SGAHMRRSLALFERQGLQVTAAATDHQIPKFSDPYIPGWIPTYARLARSSRAIHEWVGYW 228
Query: 235 IA 236
Sbjct: 229 AY 230
>gi|296108273|ref|YP_003619974.1| membrane protein [Legionella pneumophila 2300/99 Alcoy]
gi|295650175|gb|ADG26022.1| membrane protein [Legionella pneumophila 2300/99 Alcoy]
Length = 250
Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 57/242 (23%), Positives = 112/242 (46%), Gaps = 20/242 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L I + + Y L + + F+ +LL GW +P+ L L+ Y +
Sbjct: 19 LLALGICIFLLYRRLAPAFTKVMLFVVLIVLLAMSTGW--LPSYLTYQLESRYP---IVK 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + +V+LG G I +PA + S S R+ E +RL+++ +++SG
Sbjct: 74 QVNPNVKWVVVLGGGQNIGEGMPANDLLTS-ASIKRLIEGVRLFRTL----PDAKLLLSG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E+++ ++ + + +ET S++T A+ ++++ + + LV+
Sbjct: 129 GGSAGE-QSEALLLTELTSWFAIDSEKVVIETASINTADQARELAAIVHD---QPFYLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIGIL 234
SA H+ RS Q G++ A+ +D+ + + +IP S N T +AL E +G +
Sbjct: 185 SAIHMPRSMALCQQQGLHPIAAPTDFTFFWSTDTWVKLVIPNSYNLAYTSIALHEILGKI 244
Query: 235 IA 236
A
Sbjct: 245 WA 246
>gi|256618946|ref|ZP_05475792.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256965248|ref|ZP_05569419.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|256598473|gb|EEU17649.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256955744|gb|EEU72376.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
Length = 359
Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 104/237 (43%), Gaps = 37/237 (15%)
Query: 10 VSYWHLLCQSIRKIFFMSCFML---LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ LL + ++ F+L F F + + T+ + + +P +
Sbjct: 129 FFFQSLLPTWLSLPLTIAPFILTYFAFVFYNFLTVSTL------YQFNQP------RYTQ 176
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIISGGDPQK 125
+ IV+LG+G +P + +RI + ++ YK+ + +++ I++SGG
Sbjct: 177 DYIVVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPD 229
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNI--ILVSSA 182
L ES+ L G+ DDI +E S +T +N +FS MI++ N I ++
Sbjct: 230 ELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNN 289
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R+ L+ + G+ + +A ++L ++E+I I++ Y R
Sbjct: 290 YHLFRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMYKR 335
>gi|257089760|ref|ZP_05584121.1| predicted protein [Enterococcus faecalis CH188]
gi|256998572|gb|EEU85092.1| predicted protein [Enterococcus faecalis CH188]
Length = 359
Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 104/237 (43%), Gaps = 37/237 (15%)
Query: 10 VSYWHLLCQSIRKIFFMSCFML---LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ LL + ++ F+L F F + + T+ + + +P +
Sbjct: 129 FFFQSLLPTWLSLPLTIAPFILTYFAFVFYNFLTVSTL------YQFNQP------RYTQ 176
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIISGGDPQK 125
+ IV+LG+G +P + +RI + ++ YK+ + +++ I++SGG
Sbjct: 177 DYIVVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPD 229
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNI--ILVSSA 182
L ES+ L G+ DDI +E S +T +N +FS MI++ N I ++
Sbjct: 230 ELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNN 289
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R+ L+ + G+ + +A ++L ++E+I I++ Y R
Sbjct: 290 YHLFRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMYKR 335
>gi|190149832|ref|YP_001968357.1| hypothetical protein APP7_0563 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307249724|ref|ZP_07531703.1| hypothetical protein appser4_5270 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307263153|ref|ZP_07544774.1| hypothetical protein appser13_5750 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189914963|gb|ACE61215.1| hypothetical protein APP7_0563 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306858232|gb|EFM90309.1| hypothetical protein appser4_5270 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306871515|gb|EFN03238.1| hypothetical protein appser13_5750 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 252
Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 17/243 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ WIF + + H L F + M + L++ ++ L
Sbjct: 23 LILWIFSL--FLHKLQFKKLSYFCTALGMTILYICSTPYFSHQLIQ--AVTFSEKLTIED 78
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+KK IV+LG G + R + R+ L+K I+++GG
Sbjct: 79 YKK-AQAIVVLGGGVRNSHELFG-RYAIAAAPLERMRYAAYLHKQ-----TGLPILVTGG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ E+ + +L +E+ S T QNA S +M+K IILV++
Sbjct: 132 SPEGR-EPEAKIIAQEL-HDFFNVSVKWVESASNTTEQNAILSKAMLKQEGIDRIILVTN 189
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAY 237
+H+KR+++ F+ G N A+ + A IP + + +ALKE+IG
Sbjct: 190 QWHMKRAKMLFEREGFNVLAAGTTAHQALDIGILPFIPQAQALQNSSIALKEWIGYWKEK 249
Query: 238 YRG 240
G
Sbjct: 250 LIG 252
>gi|226309357|ref|YP_002769317.1| hypothetical protein RER_58700 [Rhodococcus erythropolis PR4]
gi|226188474|dbj|BAH36578.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length = 336
Score = 138 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 42/239 (17%), Positives = 105/239 (43%), Gaps = 30/239 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ ++ L + LL Q + F L+ S++G+ +L Y
Sbjct: 102 LLVPYVLLASA---LLTQRYWLAVVLGSFSLVASYLGFLFTSFLL-------YSYVYGRQ 151
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + IV+ G G + P + SR+ + ++++ + +++SG
Sbjct: 152 KYQPGMDAIVVHGAGLSGADVTPLL--------ASRLDKAADIFRAEVREGRSPLLVVSG 203
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILV 179
G ++E+ L++ G+ R+++ LE +S T +N +++ +++ K ++LV
Sbjct: 204 GKGSDEVVSEAEAMCVYLVDHGIPRENVMLEDRSTTTLENLEYTRDLLRADTTKPRMVLV 263
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S +H+ R+ + + ++ + S +A +YL L+E+ + + +
Sbjct: 264 TSNFHILRTATFARSLDLDAEVIGSH-----------TARYYLPSAILREFAAVTVEHK 311
>gi|322515196|ref|ZP_08068195.1| hypothetical protein HMPREF0027_1947 [Actinobacillus ureae ATCC
25976]
gi|322118806|gb|EFX91007.1| hypothetical protein HMPREF0027_1947 [Actinobacillus ureae ATCC
25976]
Length = 247
Score = 138 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 98/241 (40%), Gaps = 22/241 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ L WI ++ + R F + +++ I ++ T L L L+
Sbjct: 18 IALLWILSLILARFHYKKLSR--FLAAFGIIVLYLISTPLVATKLSDSL---VTNDNLTL 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+L G + S + + MR Y + I+++G
Sbjct: 73 DDYRSAQAIVVLSGGMRDSQELFG-----SIATGDSTLDRMR-YGAFLTKETSLPILVTG 126
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
P + +E+ + + E + LE ++ T +NAQFS M+ I+LV+
Sbjct: 127 SSPNGN--SEAAMMAKEF-EQFFQVKAKWLEEKAKTTKENAQFSREMLAKEGINKIVLVT 183
Query: 181 SAYHLKRSQLYFQHFGINTKASCS-------DYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ +H+KR+++ F+ G + + DY N Y+ +P + ++LKE++G
Sbjct: 184 NQWHMKRAKMLFEKQGFEVLPASTGAGVTPEDYYN-YFYYLPQAGALSSVMISLKEWMGY 242
Query: 234 L 234
L
Sbjct: 243 L 243
>gi|219666444|ref|YP_002456879.1| hypothetical protein Dhaf_0376 [Desulfitobacterium hafniense DCB-2]
gi|219536704|gb|ACL18443.1| protein of unknown function DUF218 [Desulfitobacterium hafniense
DCB-2]
Length = 258
Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats.
Identities = 40/238 (16%), Positives = 92/238 (38%), Gaps = 27/238 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + + + W L R F F L I WGI+ + +
Sbjct: 37 ILPAGVGSLFLLWGLWGDKFRNTLFSQRFPGLRKLIRWGIVLLLGSFFIIEGLILWNTED 96
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + G ++++LG G + S+ R+ + + + + +++SG
Sbjct: 97 RRPEQGKVLIILGAGLN--------GEQLSWTLRERVDKGVGILAE----NPQMKVVVSG 144
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG----KNI 176
G + E+ L+ G+ + I E +S T +N +FS ++ ++G + +
Sbjct: 145 GQGPGEWIPEAEAMAQYLIGQGIAPERILKEDRSTSTMENFRFSRVLLDQLEGFDPAEPV 204
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++++S +H+ RS++ + G+N + + L+EY ++
Sbjct: 205 LVITSDFHMFRSKILAERNGLNPVGVPC-----------STPWYIRPNAYLREYFAVV 251
>gi|322389504|ref|ZP_08063055.1| hypothetical protein HMPREF8577_0525 [Streptococcus parasanguinis
ATCC 903]
gi|321143779|gb|EFX39206.1| hypothetical protein HMPREF8577_0525 [Streptococcus parasanguinis
ATCC 903]
Length = 324
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 93/212 (43%), Gaps = 23/212 (10%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+L + + L SY +K+ + I++LG+G P +
Sbjct: 107 ILIYLTDFALFYMTFLYLSYVSYGTFCNLFPVRKEPDAIIILGSGLIGDKVPPLL----- 161
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R+ + +Y+ + +I+SGG +AE+ L+E GV D I +
Sbjct: 162 ---AQRLDKGKAIYEQFEGR---PKLIVSGGQGSDELIAEAEAMAGYLMEHGVPEDAILI 215
Query: 151 ETQSLDTFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
E +S TF+N FS +++ GK +++V++++H R+ ++ + I ++ S
Sbjct: 216 ENRSRTTFENLTFSKRLLEEEGLGKRVLVVTNSFHALRAGVFMRRLKIPGRSIGS----- 270
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+A +YL ++E IG++ Y++ +
Sbjct: 271 ------RTAFYYLPSAWIRETIGLVSLYWKWH 296
>gi|149197614|ref|ZP_01874664.1| hypothetical protein LNTAR_20313 [Lentisphaera araneosa HTCC2155]
gi|149139184|gb|EDM27587.1| hypothetical protein LNTAR_20313 [Lentisphaera araneosa HTCC2155]
Length = 247
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 47/233 (20%), Positives = 92/233 (39%), Gaps = 16/233 (6%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
W R L + + + ++ + L++ Y D I
Sbjct: 26 FYLWKKKDDKKRAYKVAMIASLSILLLSFPPVSHLIARPLEYQYP----PSSNHLDAKYI 81
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
+LG+G + P ++ S + SR+ E +R KQ + I G
Sbjct: 82 AVLGSGHSSQKHWP-DSLKLSRTARSRLMEGLR----QKQLNPEAKFIFFG-FGVNGKQP 135
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+ + GV +DI Q DT + AQF+ + + ++LV+ A H R+
Sbjct: 136 HGEIMTQAAISLGVNPEDISFSVQPRDTNEEAQFAKEVC---GTEKLLLVTDATHTPRAM 192
Query: 190 LYFQHFGINTKASCSDYL---NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
F+ +G+N A+ ++Y +A++ +P + LT ++ EY+G++ +
Sbjct: 193 KLFKSYGLNVFATPANYESYGDAWFVPMPSAEALELTRKSIYEYVGLIWVNLK 245
>gi|308048831|ref|YP_003912397.1| hypothetical protein Fbal_1114 [Ferrimonas balearica DSM 9799]
gi|307631021|gb|ADN75323.1| protein of unknown function DUF218 [Ferrimonas balearica DSM 9799]
Length = 243
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 99/238 (41%), Gaps = 16/238 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFM--LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+ + ++ LL + K+ + + + I T L L+ Y
Sbjct: 14 LPIPLACALILAGLLLRRRAPKLALTLLLAGPVYLLALSFSPISTALANSLESHYT---- 69
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
S Q + +++LG+ + P A + S + R+ E +R++++ + T+++
Sbjct: 70 SWQPGAEVAYVLVLGSSHSSHPDR-AATAQLSATALGRLMEGIRVWRA----NPDATLVL 124
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SG + + +E GV I Q+ DT Q A+ ++ ++ +L
Sbjct: 125 SGFAGSD-PTPHAELMKCAAIEQGVPESHIHTFPQARDTEQEARLTAPLV---GAAPAVL 180
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYL-NAYYSIIPLSANFYLTELALKEYIGILI 235
V+SA H+ R+ +Q G++ + +D++ + + N + ++ + EY+G L
Sbjct: 181 VTSASHMDRALSLYQAQGLSVTPAATDFIAQPTRAWYFSARNLWTSQRVIHEYLGQLW 238
>gi|307279173|ref|ZP_07560231.1| hypothetical protein HMPREF9515_01492 [Enterococcus faecalis
TX0860]
gi|306504298|gb|EFM73510.1| hypothetical protein HMPREF9515_01492 [Enterococcus faecalis
TX0860]
Length = 401
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 37/237 (15%)
Query: 10 VSYWHLLCQSIRKIFFMSCFML---LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ LL + ++ F+L F F + + T+ + + +P K
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAFVFYNFLTVSTL------YQFNQP------KYTQ 218
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIISGGDPQK 125
+ IV+LG+G +P + +RI + ++ YK+ + +++ I++SGG
Sbjct: 219 DYIVVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPD 271
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNI--ILVSSA 182
L ES+ L G+ DDI +E S +T +N +FS MI++ N I ++
Sbjct: 272 ELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNN 331
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R+ L+ + G+ + +A ++L ++E+I I++ Y R
Sbjct: 332 YHLFRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMYQR 377
>gi|227524764|ref|ZP_03954813.1| integral membrane protein [Lactobacillus hilgardii ATCC 8290]
gi|227088071|gb|EEI23383.1| integral membrane protein [Lactobacillus hilgardii ATCC 8290]
Length = 351
Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats.
Identities = 53/274 (19%), Positives = 104/274 (37%), Gaps = 59/274 (21%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF-------------------------------FMSCF 29
++ S++FL ++ + + R + F++ F
Sbjct: 78 LIFSFVFLFINAYFAWKREGRSLSSSLTLILGIGVILVDIFFLFDPINAPKPIQNFITMF 137
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+ LF F + ++ + ++ P K D + I++LG+G +
Sbjct: 138 LTLFIFYILLTVWNTMVSMIVYNLYFP------KYDKDYIIVLGSGLID-------GYKV 184
Query: 90 SFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
+RI + + Y K+ S H +I SGG + E + L+ GV D
Sbjct: 185 GRLLGNRINKGIEFYHLQLKKTSKHAKLIFSGGQGGDEKIPEGVAMKKYALDQGVPETDT 244
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+E +S++T QN FS +IKN G+ I+ V++ +H R + GI +
Sbjct: 245 LVEDKSINTRQNLIFSDRIIKNDSGRDDSKIVFVTNNFHTLRGGILAGKLGIPATGIGA- 303
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +YL ++EY+ + + + R
Sbjct: 304 ----------KTPFYYLPNAVIREYLALFVMHKR 327
>gi|319939407|ref|ZP_08013767.1| GdmH protein [Streptococcus anginosus 1_2_62CV]
gi|319811393|gb|EFW07688.1| GdmH protein [Streptococcus anginosus 1_2_62CV]
Length = 332
Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ L ++++ +RK+ ++ +L++ + + I+ + ++ K
Sbjct: 110 LSLALTFFFPHFIVLRKMLSITNGLLIYG--SYLYVTYIIYGFVYNTFPV-------IKH 160
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + R+ + +Y+ H I++SGG
Sbjct: 161 PDYIIILGSGLIGDKVPPLL--------AQRLEKGKTMYEKFHNH---PKIVVSGGQGVD 209
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IILVSSAY 183
+ E+ L + + ++DI +E QS +T +N QFS +++ +N ++V++++
Sbjct: 210 EPITEAEAMAQYLRQVCIPQEDIIIEQQSTNTLENLQFSKTILDQKSKENYYCLVVTNSF 269
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
H R+ +Y + GI ++ S +A ++L ++E IG+++ Y++ +
Sbjct: 270 HSLRAGIYMRKLGIKGRSIGS-----------RTALYFLPSAWIRETIGLIVLYWKWH 316
>gi|315302477|ref|ZP_07873325.1| integral membrane protein [Listeria ivanovii FSL F6-596]
gi|313629156|gb|EFR97441.1| integral membrane protein [Listeria ivanovii FSL F6-596]
Length = 344
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 52/239 (21%), Positives = 107/239 (44%), Gaps = 25/239 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L I LIV ++ + Q+ + + +++F G + L L ++ P++
Sbjct: 105 LGIIALIVIWFGHILQANSPVLGI---LIVFIMTVVGYFSFLFLSFLLSTFIYQYSFPRY 161
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGG 121
+ + +++LG+G I R+ P S R+ + Y K + T I+SGG
Sbjct: 162 NQ--DFLIVLGSGL-----IGGDRVSPLLAS--RLDRAISFYQKQLMKKGKRATFIVSGG 212
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NMQGKNIILVS 180
++E+ L+ G++ I +E +S++T QN QFS + M N + +
Sbjct: 213 QGTNETISEAEAMRGYLISKGIDETFIIMENKSVNTLQNMQFSKKKMDVIMPDYNSLFST 272
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL R+ LY + G+ ++ + +A +Y+ ++E+I I++ Y +
Sbjct: 273 NNFHLFRASLYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAIIVMYKK 320
>gi|89893171|ref|YP_516658.1| hypothetical protein DSY0425 [Desulfitobacterium hafniense Y51]
gi|89332619|dbj|BAE82214.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 257
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 40/238 (16%), Positives = 92/238 (38%), Gaps = 27/238 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + + + W L R F F L I WGI+ + +
Sbjct: 36 ILPAGVGSLFLLWGLWGDKSRNTLFSQRFPGLRKLIRWGIVLLLGSFFIIEGLILWNTED 95
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + G ++++LG G + S+ R+ + + + + +++SG
Sbjct: 96 RIPEQGKVLIILGAGLN--------GEQLSWTLRERVDKGVGILAE----NPQMKVVVSG 143
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG----KNI 176
G + E+ L+ G+ + I E +S T +N +FS ++ ++G + +
Sbjct: 144 GQGPGEWIPEAEAMAQYLIGQGIAPERILKEDRSTSTMENFRFSRVLLDQLEGFDPAEPV 203
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++++S +H+ RS++ + G+N + + L+EY ++
Sbjct: 204 LVITSDFHMFRSKILAERNGLNPVGVPC-----------STPWYIRPNAYLREYFAVV 250
>gi|196228088|ref|ZP_03126955.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
gi|196227491|gb|EDY21994.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
Length = 265
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 47/249 (18%), Positives = 97/249 (38%), Gaps = 20/249 (8%)
Query: 3 LSWIFLIV-SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+W+ L+V ++W + + ++L + +G + +L L+ Y +
Sbjct: 18 LTWLCLLVLTFWLAFKRQRGPAILAALGVILVTAVGSTSLAGRMLGSLERPYAG--VKID 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ IV+LG G+ P+ Q+ R+ +Y+ K +++ GG
Sbjct: 76 ELPKADAIVMLGGGS--APSRYEALGVHLTQAGDRLVMAHEVYRLGK-----APVLLLGG 128
Query: 122 DPQKHGLA---ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+ K ES + + G+ D + ++ DT A ++++ K ++L
Sbjct: 129 NVNKLDGVRKFESEIVRDLFKTWGIPEDAMIPLGENQDTHDEALKTAALAKEHGWHRVLL 188
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLN-------AYYSIIPLSANFYLTELALKEYI 231
V+SA H++R+ + G+ ++L +P F + L E I
Sbjct: 189 VTSASHMRRASGVLRAQGLEVIPVPCNFLTTVATAPPPPGLSVPRYDGFVKIAIWLHEEI 248
Query: 232 GILIAYYRG 240
G +RG
Sbjct: 249 GWYTYRHRG 257
>gi|148358637|ref|YP_001249844.1| hypothetical protein LPC_0513 [Legionella pneumophila str. Corby]
gi|148280410|gb|ABQ54498.1| conserved hypothetical protein; DUF218 [Legionella pneumophila str.
Corby]
Length = 250
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 57/242 (23%), Positives = 111/242 (45%), Gaps = 20/242 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L I + + Y L + + F+ +LL GW +P+ L L+ Y +
Sbjct: 19 LLALGICIFLLYRRLAPAFTKVMLFVVLIVLLAMSTGW--LPSYLTYQLESRYP---IVK 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + +V+LG G I +PA + S S R+ E +RL+++ +++SG
Sbjct: 74 QVNPNVKWVVVLGGGQNIGEGMPANDLLTS-ASIKRLIEGVRLFRTL----PDAKLLLSG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E+++ ++ + +ET S++T A+ ++++ + + LV+
Sbjct: 129 GGSAGE-QSEALLLTELTSWFAIDSKKVVIETASINTADQARELAAIVHD---QPFYLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIGIL 234
SA H+ RS Q G++ A+ +D+ + + +IP S N T +AL E +G +
Sbjct: 185 SAIHMPRSMALCQQQGLHPIAAPTDFTFFWSTDTWVKLVIPNSYNLAYTSIALHEILGKI 244
Query: 235 IA 236
A
Sbjct: 245 WA 246
>gi|307273126|ref|ZP_07554372.1| hypothetical protein HMPREF9514_01892 [Enterococcus faecalis
TX0855]
gi|306510111|gb|EFM79135.1| hypothetical protein HMPREF9514_01892 [Enterococcus faecalis
TX0855]
Length = 360
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 309
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 310 ALIREYIALLVHDKR 324
>gi|255975975|ref|ZP_05426561.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|255968847|gb|EET99469.1| conserved hypothetical protein [Enterococcus faecalis T2]
Length = 366
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 37/237 (15%)
Query: 10 VSYWHLLCQSIRKIFFMSCFML---LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ LL + ++ F+L F F + + T+ + + +P K
Sbjct: 136 FFFQSLLPTWLSLPLTIAPFILTYFAFVFYNFLTVSTL------YQFNQP------KYTQ 183
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIISGGDPQK 125
+ IV+LG+G +P + +RI + ++ YK+ + +++ I++SGG
Sbjct: 184 DYIVVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPD 236
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNI--ILVSSA 182
L ES+ L G+ DDI +E S +T +N +FS MI++ N I ++
Sbjct: 237 ELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNN 296
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R+ L+ + G+ + +A ++L ++E+I I++ Y R
Sbjct: 297 YHLFRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMYQR 342
>gi|126651406|ref|ZP_01723610.1| hypothetical protein BB14905_06979 [Bacillus sp. B14905]
gi|126591659|gb|EAZ85755.1| hypothetical protein BB14905_06979 [Bacillus sp. B14905]
Length = 297
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 49/237 (20%), Positives = 102/237 (43%), Gaps = 28/237 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L F+I+ W++ I+ + + ++F+ +G T+ L +Y
Sbjct: 59 ILGLSFVIMMIWYVFVIFIQIENVLWHILFFYAFLIFGY--TMFLYTSVLAYAVLYHFTP 116
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + N I+ LG+G P + SR+ E ++ YK + II+SGG
Sbjct: 117 IRYEPNYIIALGSGLIGDRVPPLL--------ASRLNEAVKQYKKYGERPF---IIVSGG 165
Query: 122 DPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNII 177
++E+ LL+ + + I +E QS +T +N F+ +++ + I
Sbjct: 166 QGTDEKVSEARAMKTYLLDVHDIPANKILMEDQSTNTEENMIFTKNIMDQHAQGEKYRSI 225
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
V++ +H+ R+ LY + ++ + S +A +Y+ +E+IG+L
Sbjct: 226 FVTNNFHVFRASLYAKKAKLDAEGVGS-----------KTAFYYVPNAFTREFIGLL 271
>gi|16800072|ref|NP_470340.1| hypothetical protein lin1003 [Listeria innocua Clip11262]
gi|16413462|emb|CAC96234.1| lin1003 [Listeria innocua Clip11262]
gi|313619596|gb|EFR91250.1| integral membrane protein [Listeria innocua FSL S4-378]
Length = 344
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 48/245 (19%), Positives = 103/245 (42%), Gaps = 28/245 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQ----SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
ML +I L++ + + + +F+G+ + F YQ
Sbjct: 98 MLPLFIGLVIVILFIFWFGSILKNGSPILGMVVVFVMAFVGYFSFLFLSFLLSTFLYQFN 157
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCT 115
+ + + +++LG+G +P + SR+ + Y K + T
Sbjct: 158 F----PRYNQDFLIVLGSGLIDGDRVPPL-------LASRLNRAIAFYEKQYDKKGKRAT 206
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGK 174
I+SGG ++E+ + L+ G++ + I +E +S++T QN QFS + + M
Sbjct: 207 FIVSGGQGANETVSEARAMRDYLISKGIDENFIIMEDKSVNTLQNMQFSKAKMDAIMPTY 266
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
N + ++ +HL R+ LY + G+ ++ + +A +Y+ ++E+I I
Sbjct: 267 NSLFSTNNFHLFRAGLYARKAGLKSQGIGA-----------KTALYYMPNALIREFIAIT 315
Query: 235 IAYYR 239
+ Y +
Sbjct: 316 VMYKK 320
>gi|227510603|ref|ZP_03940652.1| integral membrane protein [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227190255|gb|EEI70322.1| integral membrane protein [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 351
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 52/274 (18%), Positives = 104/274 (37%), Gaps = 59/274 (21%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF-------------------------------FMSCF 29
++ S++FL ++ + + R + F++ F
Sbjct: 78 LIFSFVFLFINAYFAWKREGRSLSSSLTLILGIGVILVDIFFLFDPINAPKPIQNFITMF 137
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+ LF F + ++ + ++ P K D + I++LG+G +
Sbjct: 138 LTLFIFYILLTVWNTMVSMIVYNLYFP------KYDKDYIIVLGSGLID-------GYKV 184
Query: 90 SFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
+RI + + Y K+ + H +I SGG + E + L+ GV D
Sbjct: 185 GRLLGNRINKGIEFYHLQLKKTAKHAKLIFSGGQGGDEKIPEGVAMKKYALDQGVPETDT 244
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+E +S++T QN FS +IKN G+ I+ V++ +H R + GI +
Sbjct: 245 LVEDKSINTRQNLIFSDRIIKNDSGRDDNKIVFVTNNFHTLRGGILAGKLGIPATGIGA- 303
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +YL ++EY+ + + + R
Sbjct: 304 ----------KTPFYYLPNAVIREYLALFVMHKR 327
>gi|315150439|gb|EFT94455.1| conserved hypothetical protein [Enterococcus faecalis TX0012]
Length = 344
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 153 YSWMYQMIPLKKSVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 309
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 310 ALIREYIALLVHDKR 324
>gi|222084312|ref|YP_002542841.1| hypothetical protein Arad_0152 [Agrobacterium radiobacter K84]
gi|221721760|gb|ACM24916.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 263
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 50/243 (20%), Positives = 94/243 (38%), Gaps = 16/243 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGI-IPTILLKHLQFSYQRPLLSPQ 61
L+++F ++++ +L + S +L F+ +++ L+ + R P
Sbjct: 17 LAFLFGVLAFISVLVRRRGIALASSLLSILILFVALYTNAGAYVVQGLEERFPRVAADP- 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D +++LG T T E R+ E +RL + I++SGG
Sbjct: 76 --ADLKCMIVLGGATQNQVTTVRGGYELD-SGGDRLIEALRLAQKY----PQARIVVSGG 128
Query: 122 DPQKHGLAESIVY--NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
D G E G+ +D + + S TF+NA + ++ +L+
Sbjct: 129 DGSIGGDYEGDAVISERFFTALGIGKDRLVEDKTSRTTFENAVNTKELLAQNGLSGCLLI 188
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGIL 234
+S +H+ RS F+ GI+ DY S N L ++E+IG++
Sbjct: 189 TSGFHMPRSMGIFRKQGIDVVPWPVDYRSTGKETLGLDFTQPSLNAQLLSTGVREWIGLV 248
Query: 235 IAY 237
Y
Sbjct: 249 GYY 251
>gi|326799244|ref|YP_004317063.1| hypothetical protein Sph21_1831 [Sphingobacterium sp. 21]
gi|326550008|gb|ADZ78393.1| protein of unknown function DUF218 [Sphingobacterium sp. 21]
Length = 242
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 59/235 (25%), Positives = 108/235 (45%), Gaps = 18/235 (7%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ L + K F+ F+ LF I IP IL+ L+ Y+ S + I
Sbjct: 18 FLFGKLKRTVVSKRLFVGGFLWLFI-ITCSPIPNILIYGLESKYRTYSRS--RNDKIDYI 74
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG G T T+P + S S SRI E MR+ K+ +++SG ++
Sbjct: 75 LVLGGGFTENKTLPNFE-QLSTASLSRISEAMRI----KKIFPAAKLVMSG-SKMNRTIS 128
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
++ +Y + + E G +R+D+ L + +T + A+ S K +G ILV+ A H++R+
Sbjct: 129 QAEIYAHTVFELGFQRNDVVLLNEPKNTAEEAK--SFNNKFGKGAKFILVTDAAHMQRAL 186
Query: 190 LYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILIAYYR 239
F+ ++ + +++ YY+ P + +A+ EYIG+L +
Sbjct: 187 YAFRD--MSPIPAPTNHYVKEPEKIYYAFKPSYLKIKMMNIAIHEYIGLLFYKLK 239
>gi|154249896|ref|YP_001410721.1| hypothetical protein Fnod_1217 [Fervidobacterium nodosum Rt17-B1]
gi|154153832|gb|ABS61064.1| protein of unknown function DUF218 [Fervidobacterium nodosum
Rt17-B1]
Length = 219
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 105/237 (44%), Gaps = 26/237 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+FL++ + + + F F L+F F+ + ++ + + +
Sbjct: 1 MFLLL-FALYFKKRKKLAFLFLSFALVFYFLTSNLFAYLI--------SKTFVLKDTEDK 51
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
G IV+LG G +E + R+++ + LYK+ + II++GG K
Sbjct: 52 GIFIVVLGGGVDEFSN----NVEIGKHTLRRLYKALELYKNRPR-----KIIVTGGIIDK 102
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
G+ E+++ N LL GV +DI L +++ +TF+N + + +I ++ I LV+S H+
Sbjct: 103 -GVPEALIMKNVLLNFGVPEEDIILGSKARNTFENGKCTFELIGDV---PITLVTSTIHM 158
Query: 186 KRSQLYFQHFGINTKA----SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
KRS F+ F + D+ N+Y IP + FY E G++
Sbjct: 159 KRSLFVFRKFFKDVSFVSADVPVDFRNSYLDYIPSANAFYSLCNFSHELFGMIQYKL 215
>gi|292558336|gb|ADE31337.1| hypothetical protein SSGZ1_0880 [Streptococcus suis GZ1]
Length = 336
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 101/239 (42%), Gaps = 25/239 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + Y + ++ + +S F ++F ++G+ + TI++ L L +
Sbjct: 102 MGLAVALTFYLFIAPFVVQSLSAISFFNMVFVYVGFFVSYTIIISMLYTMSSFVNLVNFF 161
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ +V+LG G P + SRI + + +Y+ +I+SGG
Sbjct: 162 PGKLDYVVVLGAGLIGDKVTPLL--------ASRIEKGIAIYQKQ----PGSKLIMSGGQ 209
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+AE N LE GV +DI +E QS +T +N +FS +++K G LV++
Sbjct: 210 GPDELIAEGQAMANYALEKGVPAEDILIENQSTNTEENLKFSYALMK--PGSRFALVTNY 267
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
YH+ R+ L + I + + ++ ++E++G ++ + +
Sbjct: 268 YHVFRALLLARQLRIKCIGYGA-----------KTKFYFSLNAFIREFVGYVVMSRKAH 315
>gi|254490468|ref|ZP_05103654.1| conserved hypothetical protein [Methylophaga thiooxidans DMS010]
gi|224464212|gb|EEF80475.1| conserved hypothetical protein [Methylophaga thiooxydans DMS010]
Length = 276
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 101/231 (43%), Gaps = 18/231 (7%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
Q+ R+I + FS + + + L+ L+ + P P + + I++LG
Sbjct: 39 QAARRIITLMSLAG-FSMLAY-PVSDYLMYPLETRFALPEDLPD---NVDGIIVLGGAEK 93
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD---PQKHGLAESIVY 134
+ ++ + E ++ RI + L + +I +GG ++ + V
Sbjct: 94 LKLSMSWKQAEVG-EAAERILKAAELSRRY----PDVPVIYTGGSNLVQMQNLDTQGSVS 148
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L ++G+++ + +ETQ+ +T +N + ++ QG N ILV+SA+H+ RS +
Sbjct: 149 QTLLTQAGIDKQRLIIETQARNTAENFFYIKPLLPKQQG-NYILVTSAFHIPRSVGIARK 207
Query: 195 FGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
GI+ DY ++ Y L + + E A E++G+ + G
Sbjct: 208 LGIDVIPYPVDYRSSRPDERYWDFDLFDHLQVLEPAWHEWLGLTAYFVTGK 258
>gi|261344282|ref|ZP_05971926.1| putative membrane protein [Providencia rustigianii DSM 4541]
gi|282567885|gb|EFB73420.1| putative membrane protein [Providencia rustigianii DSM 4541]
Length = 268
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 85/235 (36%), Gaps = 18/235 (7%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN--IIV 70
W Q K + +++ + +G I LL ++ Y + + IV
Sbjct: 31 WLTRWQKSGKTLVTASLLMI-ALLGLQPISDRLLAPVESQYNKRYELITDNPPSDVKYIV 89
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G T P S R+ E +RLY +I + G +
Sbjct: 90 VLGGGFTYNPDWSPSSNL-LSNSLPRVTEGVRLYLQH----PGSKLIFT-GGKASSSKSS 143
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ V GV D T+ DT + A +I + +LV+SA HL R+
Sbjct: 144 AEVAAMVAQSLGVPAQDTLPLTEPKDTQEEAFEVEKII---GKQPFLLVTSANHLPRALK 200
Query: 191 YFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
F G+ + ++ L N + IP S F +E A E +G + + +
Sbjct: 201 MFTSRGMQPYPAPANQLVITSEINPWERYIPSSFYFSHSERAWYELLGSIWWHIK 255
>gi|108758987|ref|YP_633512.1| hypothetical protein MXAN_5362 [Myxococcus xanthus DK 1622]
gi|15076969|gb|AAK83000.1|AF285783_5 unknown [Myxococcus xanthus]
gi|108462867|gb|ABF88052.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 258
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 48/245 (19%), Positives = 98/245 (40%), Gaps = 17/245 (6%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+ + +V++ + ++ + L++ + R Q
Sbjct: 19 ALLLWLVAWGLRRRRERLSRVLSVLGGVVLYAFSIEPVAMGLMRAAEAGAVRSF---QPG 75
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS-RIFETMRLYKSCKQHSMHCTIIISGG- 121
+ +++LG + P P + + + R+ L + +++SGG
Sbjct: 76 ATYDAVIVLGG--ALDPAATERTGVPEYNAAAERVLRGFELLHEGRAR----RVLLSGGS 129
Query: 122 -DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
DP+ + E+ V +L + G+ R+ I E +S +T +NA S+ +I+ K+++LV+
Sbjct: 130 LDPRPEAVVEADVLLRQLQQWGIPRERIVTEGRSRNTRENAVESARIIQERGWKSLLLVT 189
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELALKEYIGILI 235
SA H+ R+ F G+ D + S +P S L+ AL+E G +
Sbjct: 190 SAAHMPRAAGCFAAVGLRPDLLPVDSRASNTPLRRMSWLPRSGALNLSTDALRELAGRAV 249
Query: 236 AYYRG 240
RG
Sbjct: 250 YRVRG 254
>gi|34496963|ref|NP_901178.1| transmembrane protein [Chromobacterium violaceum ATCC 12472]
gi|34102819|gb|AAQ59183.1| probable transmembrane protein [Chromobacterium violaceum ATCC
12472]
Length = 254
Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 14/234 (5%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ +L + + L + IP + Q + P + P + I
Sbjct: 28 IVAGAMLVRRWQ-HAGRVLLALGVALTYMLSIPQTAIWLAQGVERYPPIRPADLAAADAI 86
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG G P PS + +R+ L + ++++GG P G
Sbjct: 87 VVLGGGKRPAPEFGGN--APSSDTLARLRYAAYLARQS-----GKPVLVTGGSPLG-GEP 138
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E V + L + R +E +S T NA+ S+ M+K I LVS +HL R+
Sbjct: 139 EGKVMASALHDDYGIRAR-WVEDRSDTTLDNARLSAEMLKAAGATRIALVSQGWHLGRAV 197
Query: 190 LYFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+FQ G+ + + ++ A+ +P + L+EYIG+L R
Sbjct: 198 PFFQSQGLQVSPAPTGFVRYEGPAFTRYLPSGKAMGDCHVLLREYIGLLYYRLR 251
>gi|227513619|ref|ZP_03943668.1| integral membrane protein [Lactobacillus buchneri ATCC 11577]
gi|227083135|gb|EEI18447.1| integral membrane protein [Lactobacillus buchneri ATCC 11577]
Length = 351
Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 53/274 (19%), Positives = 104/274 (37%), Gaps = 59/274 (21%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF-------------------------------FMSCF 29
++ S++FL ++ + + R + F++ F
Sbjct: 78 LIFSFVFLFINAYFAWKREGRSLSSSLTLILGIGVILVDIFFLFDPINAPKPIQNFITMF 137
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+ LF F + ++ + ++ P K D + I++LG+G +
Sbjct: 138 LTLFIFYILLTVWNTMVSMIVYNLYFP------KYDKDYIIVLGSGLID-------GYKV 184
Query: 90 SFQSYSRIFETMRLYK-SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
+RI + + Y K+ S H +I SGG + E + L+ GV D
Sbjct: 185 GRLLGNRINKGIEFYHLQLKKTSKHAKLIFSGGQGGDEKIPEGVAMKKYALDQGVPETDT 244
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+E +S++T QN FS +IKN G+ I+ V++ +H R + GI +
Sbjct: 245 LVEDKSINTRQNLIFSDRIIKNDSGRDDSKIVFVTNNFHTLRGGILAGKLGIPATEIGA- 303
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +YL ++EY+ + + + R
Sbjct: 304 ----------KTPFYYLPNAVIREYLALFVMHKR 327
>gi|296876546|ref|ZP_06900597.1| GdmH protein [Streptococcus parasanguinis ATCC 15912]
gi|296432539|gb|EFH18335.1| GdmH protein [Streptococcus parasanguinis ATCC 15912]
Length = 342
Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 93/212 (43%), Gaps = 23/212 (10%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+L + + L SY K+ + I++LG+G P +
Sbjct: 125 ILIYLTDFALFYMTFLYLSYVSYGTFCNLFPVGKEPDAIIILGSGLIGDKVPPLL----- 179
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R+ + +Y+ ++ +I+SGG +AE+ L+E GV D I +
Sbjct: 180 ---AQRLEKGKAIYEQFERR---PKLIVSGGQGSDELIAEAEAMAGYLIEHGVPEDAILI 233
Query: 151 ETQSLDTFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
E +S TF+N FS +++ GK ++LV++++H R+ ++ + I ++ S
Sbjct: 234 ENRSRTTFENLTFSKRILEEEGLGKRVLLVTNSFHALRAGVFMRRLKIPGRSIGS----- 288
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+A +YL ++E +G++ Y++ +
Sbjct: 289 ------RTAFYYLPSAWIRETVGLVSLYWKWH 314
>gi|307289203|ref|ZP_07569159.1| hypothetical protein HMPREF9505_02573 [Enterococcus faecalis
TX0109]
gi|306499912|gb|EFM69273.1| hypothetical protein HMPREF9505_02573 [Enterococcus faecalis
TX0109]
gi|315164112|gb|EFU08129.1| conserved hypothetical protein [Enterococcus faecalis TX1302]
Length = 343
Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 152 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 199
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 200 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 259
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 260 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 308
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 309 ALIREYIALLVHDKR 323
>gi|284039129|ref|YP_003389059.1| hypothetical protein Slin_4276 [Spirosoma linguale DSM 74]
gi|283818422|gb|ADB40260.1| protein of unknown function DUF218 [Spirosoma linguale DSM 74]
Length = 272
Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 51/254 (20%), Positives = 104/254 (40%), Gaps = 17/254 (6%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
W+ + + L+ + + + + +F G + L ++ + + +P
Sbjct: 17 GWLVVALIGALLVKTARLRRQLIGLALGVFWLFGNSFLVNELALWWEYPIKPDMHAPGDS 76
Query: 64 KDGNIIVLLGN---GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
IVL G G P P R + R + + + ++ISG
Sbjct: 77 VKRVAIVLTGGMINGEREAPGKPLNRTHLARFLLGREADRIGQALYLYKTGAVQKVLISG 136
Query: 121 GDPQK--HGLA---ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK- 174
G ++ E + L+ +GV +DI LE +S +T +NA+FS+ +++ K
Sbjct: 137 GLGSWPFQPISLNDEGHLAGELLIIAGVRPEDIMLEGKSRNTHENARFSAPILRKHFDKA 196
Query: 175 --NIILVSSAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELA 226
+L++SA+H+KR+ FQ G+ T S++L ++P F+ +
Sbjct: 197 HYEYVLITSAWHMKRAIACFQKEGVQTIPFPSNFLGNRRLSGPAEWLLPDEEAFFESYYL 256
Query: 227 LKEYIGILIAYYRG 240
++E++G + G
Sbjct: 257 IREFVGYITYKVVG 270
>gi|315168937|gb|EFU12954.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
Length = 344
Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 309
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 310 ALIREYIALLVHDKR 324
>gi|315155656|gb|EFT99672.1| conserved hypothetical protein [Enterococcus faecalis TX0043]
Length = 344
Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 309
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 310 ALIREYIALLVHDKR 324
>gi|299534489|ref|ZP_07047822.1| hypothetical protein BFZC1_00605 [Lysinibacillus fusiformis ZC1]
gi|298730117|gb|EFI70659.1| hypothetical protein BFZC1_00605 [Lysinibacillus fusiformis ZC1]
Length = 338
Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 52/241 (21%), Positives = 101/241 (41%), Gaps = 28/241 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L F+I+ W++ I + ++F+ +G T+ L +Y L
Sbjct: 100 ILGLSFVIMMIWYVFVIFIEIENVFWHILFFYAFLIFGY--TMFLYTSVLAYSILYLLTP 157
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + N I+ LG+G P + SR+ E ++ Y M II+SGG
Sbjct: 158 IRYEPNYIIALGSGLIGDTVPPLL--------ASRLDEAVKQYIKY---EMKPYIIVSGG 206
Query: 122 DPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNII 177
++E+ L+E + D I +E +S +T QN FS ++ + + I
Sbjct: 207 QGNDEKVSEAYAMKQYLIEVHHIPTDKIVMEDRSANTEQNMIFSKQIMDHHSHGENYRSI 266
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
V++ +H+ R+ +Y + ++ + S +A +Y+ +E+IG+L Y
Sbjct: 267 FVTNNFHVFRASIYARKAALDAEGIGS-----------KTAFYYVPNAFTREFIGLLAMY 315
Query: 238 Y 238
Sbjct: 316 K 316
>gi|298695620|gb|ADI98842.1| probable membrane protein [Staphylococcus aureus subsp. aureus
ED133]
Length = 322
Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 47/237 (19%), Positives = 99/237 (41%), Gaps = 36/237 (15%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
S + I + + + + F + C LL +FI + + + +
Sbjct: 97 SALLFISTIQSPIVKGLSMWFAILCLSLLLTFICYLV------------WTVSYRHRSYN 144
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K+ +II++LG G P + +R+ + +Y+ + II+SGG
Sbjct: 145 KEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQASAT---KIIVSGGQG 193
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNIILVSS 181
+ E++ L+ GV++ DI +E+ S++T+ N +S +I N + I+ V+S
Sbjct: 194 PDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIVCVTS 253
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+H+ R+ Q G++ S + + + +K+Y+G++ Y
Sbjct: 254 QFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQYR 299
>gi|315172207|gb|EFU16224.1| conserved hypothetical protein [Enterococcus faecalis TX1346]
Length = 344
Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ +R+ + + Y + +
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------NRLDKGIEYY----EKNP 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKKPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 309
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 310 ALIREYIALLVHDKR 324
>gi|307277969|ref|ZP_07559053.1| hypothetical protein HMPREF9515_00304 [Enterococcus faecalis
TX0860]
gi|306505366|gb|EFM74552.1| hypothetical protein HMPREF9515_00304 [Enterococcus faecalis
TX0860]
Length = 344
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 309
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 310 ALIREYIALLVHDKR 324
>gi|169825776|ref|YP_001695934.1| hypothetical protein Bsph_0170 [Lysinibacillus sphaericus C3-41]
gi|168990264|gb|ACA37804.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
Length = 242
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 101/238 (42%), Gaps = 30/238 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M LS++ +++ Y ++ I + + F F G+ T+ L +Y
Sbjct: 5 MGLSFVIMMIGYVFVIFIQIENVLWHILFFYAFLIFGY----TMFLYTSVLAYAVLYHFT 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + N I+ LG+G P + SR+ E ++ YK + II+SG
Sbjct: 61 PIRYEPNYIIALGSGLIGDRVPPLL--------ASRLNEAVKQYKKYGERPF---IIVSG 109
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNI 176
G ++E+ LL+ + + + +E QS +T +N F+ +++ +
Sbjct: 110 GQGTDENVSEAKAMKKYLLDVHDIPANKVLMEDQSTNTEENMIFTKNIMDQHAQGEKYRS 169
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I V++ +H+ R+ LY + ++ + S +A +Y+ +E+IG+L
Sbjct: 170 IFVTNNFHVFRASLYAKKAKLDAEGVGS-----------KTAFYYVPNAFTREFIGLL 216
>gi|300722543|ref|YP_003711833.1| hypothetical protein XNC1_1572 [Xenorhabdus nematophila ATCC 19061]
gi|297629050|emb|CBJ89635.1| putative enzyme [Xenorhabdus nematophila ATCC 19061]
Length = 269
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 18/246 (7%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY-QRPLLS 59
+++S + LI+ ++ + + I +S +L + I LL ++ Y QR
Sbjct: 20 IIISLVALILLWFTRWQKIGKAILSLSWLVL--LLLSLQPIADKLLLPIEGKYVQRYEPD 77
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
I +LG G T P S R+ E +RLY + +I +
Sbjct: 78 ISQTTPIKHIAVLGGGFTYNPHWAPSANLISNN-LPRVTEGIRLYH----LNPGAKMIFT 132
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG + ++ + V G+ +D LDT + A + + + + ILV
Sbjct: 133 GGKGV-NSISSAEVAAMVAQSMGIPVEDTIALKNPLDTEEEA---AEIENVIGKQPFILV 188
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGI 233
+SA H++R+ +F+ G+ A+ ++ L + IP + F TE A E +G
Sbjct: 189 TSANHMERAVRFFEQRGLRPIAAPANQLAITTPLYPWEKYIPSAYYFSHTERAWYETLGR 248
Query: 234 LIAYYR 239
+ +
Sbjct: 249 IWQAIK 254
>gi|332701660|ref|ZP_08421748.1| protein of unknown function DUF218 [Desulfovibrio africanus str.
Walvis Bay]
gi|332551809|gb|EGJ48853.1| protein of unknown function DUF218 [Desulfovibrio africanus str.
Walvis Bay]
Length = 263
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 46/235 (19%), Positives = 84/235 (35%), Gaps = 20/235 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W + R+ + LL + + L+ L+ + RP+ P + I++L
Sbjct: 30 WTRWSRWGRRCVGFALAGLL--ILAVLPVGQALMSPLEERFPRPVEMPAEVEG---IIVL 84
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAE 130
G G + + R+ + L + H +++SGG + L E
Sbjct: 85 G-GYQDLLVFENRGQPELTAAADRLVAFVELARRY----PHAKLVVSGGSGMLLRQDLKE 139
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
S V L G + + E S T +NA S + Q +LV+SA H+ R+
Sbjct: 140 SDVTRAALACLGFDDSRVIYEEISRTTHENAMVS----RPSQDGLWLLVTSASHMPRAVG 195
Query: 191 YFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
F+ DY + L A++E++G+++ G
Sbjct: 196 VFRAQDWRVLPYPVDYRTVAGMVWEFPFQTGQRLALVSAAMREWVGLVVYRLIGR 250
>gi|258512251|ref|YP_003185685.1| hypothetical protein Aaci_2287 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478977|gb|ACV59296.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 259
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 55/253 (21%), Positives = 103/253 (40%), Gaps = 25/253 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFI--GWGIIPTILLKHLQFSYQRPLL 58
+ + +L R+ F ++ + +F + LL L+ +Y P
Sbjct: 13 LPPGLFASLTLVLAILLARHRRGFAIAFAAVSLAFAAACTPAVGNWLLIPLERAYAPPA- 71
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF----QSYSRIFETMRLYKSCKQHSMHC 114
+ G+ IV+LG G + A + S R+ LY+ +H
Sbjct: 72 ----RPTGDAIVVLGAGFSAATPDFADPALDTGTLYGDSGERVLAAAALYRR-----LHL 122
Query: 115 TIIISGG---DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
I++SGG A +++ L GV + D+ ++ S T +NA+ ++ M++ +
Sbjct: 123 PIVLSGGPLIRANGKSYAFALIAARDLAALGVPQRDLYVDATSRTTEENAEHTAVMLRRL 182
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY------YSIIPLSANFYLTEL 225
ILV+SA + R+ + F+ G+ + Y+ + Y+ +P A T
Sbjct: 183 HRSRPILVASAAQMARAVIDFRRVGVKVEPYPVGYVASSVCTPLAYAWLPSQAGLDETCT 242
Query: 226 ALKEYIGILIAYY 238
AL E +GIL A+
Sbjct: 243 ALHEDLGILAAHL 255
>gi|312903405|ref|ZP_07762585.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|310633281|gb|EFQ16564.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|315169828|gb|EFU13845.1| conserved hypothetical protein [Enterococcus faecalis TX1342]
gi|315577610|gb|EFU89801.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
Length = 344
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 80/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG + E+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVTEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 309
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 310 ALIREYIALLVHDKR 324
>gi|121999045|ref|YP_001003832.1| hypothetical protein Hhal_2266 [Halorhodospira halophila SL1]
gi|121590450|gb|ABM63030.1| protein of unknown function DUF218 [Halorhodospira halophila SL1]
Length = 268
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 50/254 (19%), Positives = 102/254 (40%), Gaps = 22/254 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR---PL 57
++L+ I ++ + R + + L W + LL L+ Y P
Sbjct: 18 LVLAGILGVILLLTRYWRWGRGVLIGTVVAL--YLASWEPTASRLLAPLEQRYPALLDPA 75
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ + IV+LG+G + P +P I + + +R+ E +RL + H T+
Sbjct: 76 GVAETQGPVTDIVVLGHGHRLDPQLP-ITAQANADGVTRVLEGVRLQR----HFPDSTLW 130
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
++GG + S V + E G++ ++ + +T + AQ + + + G II
Sbjct: 131 LTGGAVRG-DTPNSEVLYRLMGEVGLDAGAVERLAEPRNTAEEAQAVAERLTDDAG-TII 188
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLN----------AYYSIIPLSANFYLTELAL 227
LV+ A H+ R+ F+ + + + + + + P ++T+ A
Sbjct: 189 LVTEASHMPRAMGLFRGQELEPIPAPTRHRVRAHEPDAGTHPGHGVRPSVHALHMTKRAF 248
Query: 228 KEYIGILIAYYRGN 241
EY+G+ RG
Sbjct: 249 HEYLGMAWGRMRGQ 262
>gi|311899501|dbj|BAJ31909.1| hypothetical protein KSE_61430 [Kitasatospora setae KM-6054]
Length = 330
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 45/229 (19%), Positives = 94/229 (41%), Gaps = 36/229 (15%)
Query: 16 LCQSIRKIFFMSCFM--LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L R +F ++C++ L F+G+ + L+ ++D + +V+LG
Sbjct: 121 LVTVARTVFAVACYLSFLFACFVGYAYLYGRLI---------------PREDVDYVVVLG 165
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + R+ P S R+ RLY+ +++SGG L E+
Sbjct: 166 AGL-----LDGSRVPPLLAS--RLDRGRRLYERQVDRGRSPLLLVSGGKGGDEQLPEADA 218
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYF 192
L+E G D I E +S T +N +FS +++ ++V++ +H R+ ++
Sbjct: 219 MAGYLVERGFPADRIVREDRSATTEENLRFSHAIMAAADPDYRCVVVTNNFHAFRAAVFA 278
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ G+ S +A ++ ++E++ +++ Y N
Sbjct: 279 RREGVRGHVVGSP-----------TAAYFWPSATIREFVALIVVYRWAN 316
>gi|29376218|ref|NP_815372.1| hypothetical protein EF1664 [Enterococcus faecalis V583]
gi|227518851|ref|ZP_03948900.1| integral membrane protein [Enterococcus faecalis TX0104]
gi|227553467|ref|ZP_03983516.1| integral membrane protein [Enterococcus faecalis HH22]
gi|229545724|ref|ZP_04434449.1| integral membrane protein [Enterococcus faecalis TX1322]
gi|229549915|ref|ZP_04438640.1| integral membrane protein [Enterococcus faecalis ATCC 29200]
gi|293382896|ref|ZP_06628814.1| conserved hypothetical protein [Enterococcus faecalis R712]
gi|293389615|ref|ZP_06634072.1| conserved hypothetical protein [Enterococcus faecalis S613]
gi|300860845|ref|ZP_07106932.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|307274861|ref|ZP_07556024.1| hypothetical protein HMPREF9521_00474 [Enterococcus faecalis
TX2134]
gi|307291900|ref|ZP_07571769.1| hypothetical protein HMPREF9509_02197 [Enterococcus faecalis
TX0411]
gi|312899511|ref|ZP_07758841.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|312907633|ref|ZP_07766624.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|312910250|ref|ZP_07769097.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|312951594|ref|ZP_07770490.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|29343681|gb|AAO81442.1| conserved hypothetical protein [Enterococcus faecalis V583]
gi|227073700|gb|EEI11663.1| integral membrane protein [Enterococcus faecalis TX0104]
gi|227177402|gb|EEI58374.1| integral membrane protein [Enterococcus faecalis HH22]
gi|229304988|gb|EEN70984.1| integral membrane protein [Enterococcus faecalis ATCC 29200]
gi|229309174|gb|EEN75161.1| integral membrane protein [Enterococcus faecalis TX1322]
gi|291079561|gb|EFE16925.1| conserved hypothetical protein [Enterococcus faecalis R712]
gi|291081232|gb|EFE18195.1| conserved hypothetical protein [Enterococcus faecalis S613]
gi|300849884|gb|EFK77634.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|306496898|gb|EFM66446.1| hypothetical protein HMPREF9509_02197 [Enterococcus faecalis
TX0411]
gi|306508309|gb|EFM77416.1| hypothetical protein HMPREF9521_00474 [Enterococcus faecalis
TX2134]
gi|310626661|gb|EFQ09944.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|310630560|gb|EFQ13843.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|311289523|gb|EFQ68079.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|311293381|gb|EFQ71937.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|315027821|gb|EFT39753.1| conserved hypothetical protein [Enterococcus faecalis TX2137]
gi|315029286|gb|EFT41218.1| conserved hypothetical protein [Enterococcus faecalis TX4000]
gi|315034068|gb|EFT46000.1| conserved hypothetical protein [Enterococcus faecalis TX0017]
gi|315147360|gb|EFT91376.1| conserved hypothetical protein [Enterococcus faecalis TX4244]
gi|315152384|gb|EFT96400.1| conserved hypothetical protein [Enterococcus faecalis TX0031]
gi|315158173|gb|EFU02190.1| conserved hypothetical protein [Enterococcus faecalis TX0312]
gi|315575767|gb|EFU87958.1| conserved hypothetical protein [Enterococcus faecalis TX0309B]
gi|315580419|gb|EFU92610.1| conserved hypothetical protein [Enterococcus faecalis TX0309A]
gi|327535229|gb|AEA94063.1| hypothetical protein OG1RF_11376 [Enterococcus faecalis OG1RF]
Length = 344
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 309
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 310 ALIREYIALLVHDKR 324
>gi|146318649|ref|YP_001198361.1| hypothetical protein SSU05_0995 [Streptococcus suis 05ZYH33]
gi|146320855|ref|YP_001200566.1| hypothetical protein SSU98_1008 [Streptococcus suis 98HAH33]
gi|253751768|ref|YP_003024909.1| hypothetical protein SSUSC84_0901 [Streptococcus suis SC84]
gi|253753592|ref|YP_003026733.1| membrane protein [Streptococcus suis P1/7]
gi|253755527|ref|YP_003028667.1| membrane protein [Streptococcus suis BM407]
gi|145689455|gb|ABP89961.1| Uncharacterized conserved protein [Streptococcus suis 05ZYH33]
gi|145691661|gb|ABP92166.1| Uncharacterized conserved protein [Streptococcus suis 98HAH33]
gi|251816057|emb|CAZ51677.1| putative membrane protein [Streptococcus suis SC84]
gi|251817991|emb|CAZ55773.1| putative membrane protein [Streptococcus suis BM407]
gi|251819838|emb|CAR45817.1| putative membrane protein [Streptococcus suis P1/7]
gi|319758117|gb|ADV70059.1| hypothetical protein SSUJS14_0982 [Streptococcus suis JS14]
Length = 336
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 100/239 (41%), Gaps = 25/239 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + Y + ++ + +S F ++F ++G+ + I++ L L +
Sbjct: 102 MGLAVALTFYLFIAPFVVQSLSAISFFNMVFVYVGFFVSYAIIISMLYTMSSFVNLVNFF 161
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ +V+LG G P + SRI + + +Y+ +I+SGG
Sbjct: 162 PGKLDYVVVLGAGLIGDKVTPLL--------ASRIEKGIAIYQKQ----PGSKLIMSGGQ 209
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+AE N LE GV +DI +E QS +T +N +FS +++K G LV++
Sbjct: 210 GPDELIAEGQAMANYALEKGVPAEDILIENQSTNTEENLKFSYALMK--PGSRFALVTNY 267
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
YH+ R+ L + I + + ++ ++E++G ++ + +
Sbjct: 268 YHVFRALLLARQLRIKCIGYGA-----------KTKFYFSLNAFIREFVGYVVMSRKAH 315
>gi|315145143|gb|EFT89159.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
gi|315162313|gb|EFU06330.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
Length = 344
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 309
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 310 ALIREYIALLVHDKR 324
>gi|148241215|ref|YP_001226372.1| hypothetical protein SynRCC307_0116 [Synechococcus sp. RCC307]
gi|147849525|emb|CAK27019.1| Uncharacterised conserved membrane protein [Synechococcus sp.
RCC307]
Length = 265
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 92/243 (37%), Gaps = 26/243 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + L+ + ++ LL+ L+ L+P+ + + +++LG G
Sbjct: 30 RKQRWALPLSITGWLVIAVPAMPVVSDALLRQLEDQ--AASLTPKSLPEADAVLVLGGGI 87
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP----QKHGLAESI 132
P ++ R+ +RL++ K +I SG E++
Sbjct: 88 RPAPAKGQGVEVN--EAGDRLLCGVRLWRQGK----APVLITSGARVSFTLNDPIAPEAV 141
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ E GV + L ++ T + AQ + + K +ILV+SA+H+ R+ F
Sbjct: 142 LSQQLAQELGVPASALLLNEKARTTAEEAQRINQLAAEQGWKQLILVTSAFHMPRALASF 201
Query: 193 QHFG-INTKASCSDY------LNAYYSI-------IPLSANFYLTELALKEYIGILIAYY 238
+ + DY N +S IP S T LKE++G+L+
Sbjct: 202 KRQSELQIIPVACDYQLDPQHQNQAFSWGELLIDLIPSSDALDQTTQVLKEHLGLLVYQL 261
Query: 239 RGN 241
RG
Sbjct: 262 RGQ 264
>gi|296446397|ref|ZP_06888341.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
gi|296256032|gb|EFH03115.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
Length = 265
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 41/249 (16%), Positives = 94/249 (37%), Gaps = 21/249 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ + L+ + + + + + + + + + L+ L+ + P
Sbjct: 22 LMTLGVALLFTRYAKTGRRLATLGLAALLI-----MAATPLGGALMAALENRFPAPPQDA 76
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
IV+LG T R + ++ R+ + L + ++ SG
Sbjct: 77 PPPDG---IVVLGGAMDEHITAARGRAAFN-EAGERLLAFVELARRY----PQARLVFSG 128
Query: 121 GDPQKHGL--AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G E+ E+G+ + + E +S +T++NA ++ + + + +L
Sbjct: 129 GSASLTEARFTEADAAAVFFREAGLAPERVLYENRSRNTWENAVYTRDLARPASSERWLL 188
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA---YYSIIPL---SANFYLTELALKEYIG 232
V+SA H+ R+ F+ G A DY +S+ P + + A E+IG
Sbjct: 189 VTSAAHMPRAMGIFRQVGFPATAFPVDYRTTGHIGWSLRPDKHIADGLAFFDTAAHEWIG 248
Query: 233 ILIAYYRGN 241
+ + ++ G
Sbjct: 249 LAVYHWTGK 257
>gi|117923765|ref|YP_864382.1| hypothetical protein Mmc1_0451 [Magnetococcus sp. MC-1]
gi|117607521|gb|ABK42976.1| protein of unknown function DUF218 [Magnetococcus sp. MC-1]
Length = 230
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 89/233 (38%), Gaps = 10/233 (4%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
++++ + F + ML + ++++L+ Q +
Sbjct: 2 LLAFLCMRRWPKLARFTLVLAMLALYLQSAPWVSEAMIQYLESKTQALNPQRAAADPAQL 61
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
V+LG G S +R+ LY++ I+++GG P
Sbjct: 62 TVVLGCGRYPEAPEYGGVDTLSTCGLARVRYGAYLYRA-----TGRPILVAGGAPYGEQR 116
Query: 129 AESIVYNNKL-LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+E+ L E + + E S +T++NA+ S++++K +I LV+ A + R
Sbjct: 117 SEADAMAEVLEREFRIPV--MFREGGSRNTWENAKNSAAILKREGLTHIFLVTHAKDMSR 174
Query: 188 SQLYFQHFGINTKASCSDYLN--AYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ F+ GI + + + + + L NFY AL E +GIL
Sbjct: 175 AAWAFREQGIQVTEAPTLFKTKSPAWPLPYLPDNFYEFRWALHELVGILYYRL 227
>gi|312866618|ref|ZP_07726833.1| putative membrane protein [Streptococcus parasanguinis F0405]
gi|311097917|gb|EFQ56146.1| putative membrane protein [Streptococcus parasanguinis F0405]
Length = 342
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 44/212 (20%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+L + + L SY +K+ + I++LG+G P +
Sbjct: 125 ILIYLTDFALFYMTFLYLSYVSYGTFCNLFPVRKEPDAIIILGSGLIGDKVPPLL----- 179
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R+ + +Y+ ++ +I+SGG +AE+ L+E GV D I +
Sbjct: 180 ---AQRLEKGKAIYEQFERR---PKLIVSGGQGSDELIAEAEAMAGYLIEHGVPEDAILI 233
Query: 151 ETQSLDTFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
E +S TF+N FS +++ GK +++V++++H R+ ++ + I ++ S
Sbjct: 234 ENRSRTTFENLTFSKRILEEEGLGKRVLVVTNSFHALRAGVFMRRLKIPGRSIGS----- 288
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+A +YL ++E +G++ Y++ +
Sbjct: 289 ------KTAFYYLPSAWIRETVGLVSLYWKWH 314
>gi|257416189|ref|ZP_05593183.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
gi|257422515|ref|ZP_05599505.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|257158017|gb|EEU87977.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
gi|257164339|gb|EEU94299.1| conserved hypothetical protein [Enterococcus faecalis X98]
Length = 337
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 146 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 194 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 253
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 254 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 302
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 303 ALIREYIALLVHDKR 317
>gi|240948368|ref|ZP_04752754.1| hypothetical protein AM305_05929 [Actinobacillus minor NM305]
gi|240297407|gb|EER47948.1| hypothetical protein AM305_05929 [Actinobacillus minor NM305]
Length = 247
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 49/246 (19%), Positives = 101/246 (41%), Gaps = 26/246 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + WI ++ ++ L + I + + LL+ F + T+L L + L+
Sbjct: 19 IAVIWILSLI-FYRLHYKKISRSLTILGITLLYLF-STPFMATLLSNSL---VKENTLTL 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + IV+LG G + + + E MR Y + I+ +G
Sbjct: 74 QDYRQAQAIVVLGGGLRDSNELYGKLTVTNNE-----LERMR-YAAYLHKETQLPILATG 127
Query: 121 GDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
P + +E+ + + + V +E+Q+ T +NA ++ ++K I+LV
Sbjct: 128 SAPNGN--SEAEIIAKEFKQFFDVPTK--WIESQAKTTKENALYTKDILKKEGINTIVLV 183
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGI 233
+ +H++R++L F+ G + + Y + +P S L LKE++G
Sbjct: 184 TQNWHMQRAKLLFEQQGFHVLPAGVGYGKTPSEYINFMYFVPQSGAMDNIMLFLKEWLG- 242
Query: 234 LIAYYR 239
Y++
Sbjct: 243 ---YWK 245
>gi|307611505|emb|CBX01179.1| hypothetical protein LPW_28781 [Legionella pneumophila 130b]
Length = 250
Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 56/242 (23%), Positives = 110/242 (45%), Gaps = 20/242 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L I + + Y L + + F+ +LL GW +P+ L L+ Y +
Sbjct: 19 LLTLGICIFLLYRRLAPTFTKVMLFVVLLVLLAMSTGW--LPSYLTYQLESRYP---IVK 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG G I +PA + S S R+ E +RL++ +++SG
Sbjct: 74 RVNPNVKWVVVLGGGQNIGEGMPANDLLTS-ASLKRLVEGVRLFRDL----PDAKLLLSG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E+++ ++ + + +ET S++T A+ ++++ + LV+
Sbjct: 129 GGSAGE-QSEALLLAELTKWFAIDPEKVVIETVSINTADQARELAAIVHDH---PFYLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIGIL 234
SA H+ RS Q G++ A+ +D+ + + +IP S N T +AL E +G +
Sbjct: 185 SAIHMPRSMALCQQQGLHPIAAPTDFTFFWSTDTWVKMVIPNSYNLAYTSIALHEILGKI 244
Query: 235 IA 236
A
Sbjct: 245 WA 246
>gi|255975750|ref|ZP_05426336.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|255968622|gb|EET99244.1| conserved hypothetical protein [Enterococcus faecalis T2]
Length = 337
Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 146 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 194 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 253
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 254 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 302
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 303 ALIREYIALLVHDKR 317
>gi|257465061|ref|ZP_05629432.1| hypothetical protein AM202_01030 [Actinobacillus minor 202]
gi|257450721|gb|EEV24764.1| hypothetical protein AM202_01030 [Actinobacillus minor 202]
Length = 247
Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 49/246 (19%), Positives = 101/246 (41%), Gaps = 26/246 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + WI ++ ++ L + I + + LL+ F + T+L L + L+
Sbjct: 19 IAVIWILSLI-FYRLHYKKISRSLTILGIALLYLF-STPFMATLLSNSLVKEHT---LTL 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + IV+LG G + + + E MR Y + I+ +G
Sbjct: 74 QDYRQAQAIVVLGGGLRDSNELYGKLTVTNNE-----LERMR-YAAYLHKETQLPILATG 127
Query: 121 GDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
P + +E+ + + + V +E+Q+ T +NA ++ +++ IILV
Sbjct: 128 SAPNGN--SEAEIIAKEFKQFFDVPTK--WIESQAKTTKENALYTKDILEKEGINTIILV 183
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIGI 233
+ +H++R++L F+ G + + Y + +P S L LKE++G
Sbjct: 184 TQNWHMQRAKLLFEQQGFHVLPAGVGYGKTPSEYINFMYFVPQSGAMDNIMLFLKEWLG- 242
Query: 234 LIAYYR 239
Y++
Sbjct: 243 ---YWK 245
>gi|257082455|ref|ZP_05576816.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|256990485|gb|EEU77787.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
Length = 337
Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 146 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 194 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 253
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 254 QKMSSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 302
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 303 ALIREYIALLVHDKR 317
>gi|255972698|ref|ZP_05423284.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|256619159|ref|ZP_05476005.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256762595|ref|ZP_05503175.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|256853221|ref|ZP_05558591.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256961832|ref|ZP_05566003.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256965029|ref|ZP_05569200.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|257086952|ref|ZP_05581313.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|255963716|gb|EET96192.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|256598686|gb|EEU17862.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256683846|gb|EEU23541.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|256711680|gb|EEU26718.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256952328|gb|EEU68960.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256955525|gb|EEU72157.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|256994982|gb|EEU82284.1| conserved hypothetical protein [Enterococcus faecalis D6]
Length = 337
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 146 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 194 TAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 253
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 254 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 302
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 303 ALIREYIALLVHDKR 317
>gi|257089980|ref|ZP_05584341.1| conserved hypothetical protein [Enterococcus faecalis CH188]
gi|256998792|gb|EEU85312.1| conserved hypothetical protein [Enterococcus faecalis CH188]
Length = 337
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 80/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 146 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG + E+ LL + + I +E QS T++N FS ++I+
Sbjct: 194 TAKFVVSGGQGPDEPVTEAFAMKKYLLSQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 253
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 254 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 302
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 303 ALIREYIALLVHDKR 317
>gi|329571598|gb|EGG53279.1| hypothetical protein HMPREF9520_02582 [Enterococcus faecalis
TX1467]
Length = 344
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLLQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 309
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 310 ALIREYIALLVHDKR 324
>gi|300716091|ref|YP_003740894.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
gi|299061927|emb|CAX59043.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
Length = 262
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 43/241 (17%), Positives = 85/241 (35%), Gaps = 19/241 (7%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
++ W Q KI + +L + + + LL + Y +
Sbjct: 25 IALLLLWFSRWQKTGKIILSAACLL-LALLSLQPVADNLLAPTENRYPTWQNQQKVGYVV 83
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ G A S R+ E +RL++ + +I +G Q +
Sbjct: 84 VL-----GGGYTWNPDWAPGSNMINNSLPRLVEGIRLWRE----NPGAKLIFTGAAAQNN 134
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
++ + V + GV I + DT Q A + ++ +LV+SA HL
Sbjct: 135 PVSSAEVTSRVAQSLGVPLSAIVTLDKPRDTRQEAAEVAKVV---GKTPFLLVTSASHLP 191
Query: 187 RSQLYFQHFGINTKASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
R+ ++FQ G++ + ++ LN + IP ++ A+ E++G
Sbjct: 192 RAMIFFQQQGLDPLPAPANQLAIDSPLNVWERAIPSPLWLGHSDRAIYEWLGRGWQRLTS 251
Query: 241 N 241
Sbjct: 252 G 252
>gi|86749502|ref|YP_485998.1| hypothetical protein RPB_2382 [Rhodopseudomonas palustris HaA2]
gi|86572530|gb|ABD07087.1| Protein of unknown function DUF218 [Rhodopseudomonas palustris
HaA2]
Length = 264
Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 15/192 (7%)
Query: 60 PQWKKDGNI---IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P W+ G I++LG G A S R+ + L + I
Sbjct: 70 PPWQFSGRAPDGIIVLG-GAIDSEVSAARDAVELDSSAERVMAALELARDY----PQARI 124
Query: 117 IISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+ SGG ++ +AE+ + + GV D +E++S T +NA F+ ++ G+
Sbjct: 125 VYSGGSGNLIQNSVAEAPIAADLFARFGVAPDRFVVESRSRTTAENASFTRELVSPKPGE 184
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-----IIPLSANFYLTELALKE 229
+LV+SA+H+ RS F+ G + A+ D+ + LS+ T++A E
Sbjct: 185 VWLLVTSAFHMPRSITAFRAAGFDVTAAPVDWRTRGWGDAARPFDRLSSGLARTDVAAHE 244
Query: 230 YIGILIAYYRGN 241
+ G+L G
Sbjct: 245 WAGLLAYRLSGR 256
>gi|288958654|ref|YP_003448995.1| hypothetical protein AZL_018130 [Azospirillum sp. B510]
gi|288910962|dbj|BAI72451.1| hypothetical protein AZL_018130 [Azospirillum sp. B510]
Length = 264
Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF-QSYSRIFE 99
+ ++ L+ + R + + + I++LG + P I A R +PS ++ RI
Sbjct: 59 LGALVALPLENRFPR----SEPEGRIDGIIMLGG--AVNPPITADRGDPSLNEAAERILG 112
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
L + + + +GG Q L E + L ++G+ D + E +S +T
Sbjct: 113 FADLVRRHPEAKA----VFTGGSGQLLAPDLKEDVTARAALAQAGIPADRVLYEAESRNT 168
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS----I 213
++NA FS M++ G+ IL++SA H+ RS F+ G + DY + +
Sbjct: 169 WENAVFSKEMVRPRPGERWILITSAMHMPRSVGIFREVGWPVEPYPVDYRTRHDARPILR 228
Query: 214 IPLSANFYLTELALKEYIGILIAYYRGN 241
L N + + A++E+IG+ + G
Sbjct: 229 FQLDQNLVILDDAVREWIGLAAYWAMGR 256
>gi|134099149|ref|YP_001104810.1| hypothetical protein SACE_2594 [Saccharopolyspora erythraea NRRL
2338]
gi|291009369|ref|ZP_06567342.1| hypothetical protein SeryN2_33020 [Saccharopolyspora erythraea NRRL
2338]
gi|133911772|emb|CAM01885.1| putative membrane protein [Saccharopolyspora erythraea NRRL 2338]
Length = 331
Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 44/257 (17%), Positives = 103/257 (40%), Gaps = 44/257 (17%)
Query: 7 FLIVSYWHLLCQSIRKI---FFMSCFMLLFSFIGWGIIPTIL-LKHLQFS---------- 52
FLI + +L + R++ ++ + + + I + + LQ +
Sbjct: 75 FLIANGLTMLRREGRRLANLLSLAAGVGIIALIALRALANSTRWRPLQVAMDAVGSVLAY 134
Query: 53 ----------YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
Y + ++D + +V+LG+G R+ P S R+
Sbjct: 135 VSLLFVCFLLYAFVYGMLRHRRDVDFVVVLGSGLI------GSRVPPLLAS--RLDRGRE 186
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
++++ + +++SGG + E+ + L GV D I +E QS T +N +
Sbjct: 187 VFETAQAKGRDPMLVVSGGQGPGEDVPEARAMADYLGSRGVPEDRILIEDQSRSTEENLR 246
Query: 163 FSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFY 221
FS ++++ + ++V++ +H+ R+ + +N + S +A ++
Sbjct: 247 FSKAIMQERRSDYRCLVVTNNFHVMRAARTARSEKVNGQVIGS-----------RTARYF 295
Query: 222 LTELALKEYIGILIAYY 238
++E+I I +A+
Sbjct: 296 WPSAIIREFIAIFLAHR 312
>gi|229035448|ref|ZP_04189344.1| hypothetical protein bcere0028_54330 [Bacillus cereus AH1271]
gi|228727867|gb|EEL78947.1| hypothetical protein bcere0028_54330 [Bacillus cereus AH1271]
Length = 176
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG+G P + SRI + + Y + + I SGG ++E
Sbjct: 1 MLGSGLIGDRVPPLL--------ASRINKGIEFYHRQAEVTSPPIFIFSGGQGADELVSE 52
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRS 188
+ +E G+ + + E QS++T+QN FS ++ +++G N I ++ +HL R+
Sbjct: 53 AHAMQAYAVEKGIPIEHTRKEDQSVNTYQNMLFSKRIMDSLKGATYNSIFTTNNFHLFRA 112
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
L+ + G+N++ S +A +Y ++EYI +++ Y++
Sbjct: 113 GLFAKQSGLNSQGIGS-----------KTAFYYWPNAMIREYIAVVVMYHK 152
>gi|120599528|ref|YP_964102.1| hypothetical protein Sputw3181_2731 [Shewanella sp. W3-18-1]
gi|120559621|gb|ABM25548.1| protein of unknown function DUF218 [Shewanella sp. W3-18-1]
Length = 231
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 47/240 (19%), Positives = 103/240 (42%), Gaps = 12/240 (5%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M + +I L++ + + + ++ +L F+ + L++ L+ Y ++
Sbjct: 1 MPIPFILLLLLVSLFIWRRTMAKYLVASAFILLLFLSSQLSVRTLVRPLESIYP---INS 57
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++LG+ + I A++ S + +R+ E +R C +I+SG
Sbjct: 58 APISGQCFVMVLGSSHSDIQAATAVQ-SLSAVALARLSEGIR----QLGLGQDCILIVSG 112
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ ++ + + +E GV++ I + DT + AQ+ + + LV+
Sbjct: 113 WGGELTQISHAEMMAKAAVELGVDKIKIIQFPLARDTLEEAQYLKW---ELGDSSFRLVT 169
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA-NFYLTELALKEYIGILIAYYR 239
SA H+ R+ F G+ A+ +D+ L+A N ++ A+ EYIG L + +
Sbjct: 170 SASHMPRAMAIFTGKGLLASAAPTDFRARDDFWWRLTADNLVSSQRAIHEYIGRLWLWIK 229
>gi|294781623|ref|ZP_06746959.1| putative membrane protein [Enterococcus faecalis PC1.1]
gi|307269476|ref|ZP_07550815.1| hypothetical protein HMPREF9498_01609 [Enterococcus faecalis
TX4248]
gi|294451319|gb|EFG19785.1| putative membrane protein [Enterococcus faecalis PC1.1]
gi|306514096|gb|EFM82672.1| hypothetical protein HMPREF9498_01609 [Enterococcus faecalis
TX4248]
gi|323480825|gb|ADX80264.1| conserved hypothetical protein [Enterococcus faecalis 62]
Length = 344
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLLQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 309
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 310 ALIREYIALLVHDKR 324
>gi|315037077|gb|EFT49009.1| conserved hypothetical protein [Enterococcus faecalis TX0027]
Length = 344
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 153 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 201 TAKFVVSGGQGPDEPVAEAFAMKKYLLLQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 260
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 261 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 309
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 310 ALIREYIALLVHDKR 324
>gi|167854576|ref|ZP_02477357.1| hypothetical protein HPS_02329 [Haemophilus parasuis 29755]
gi|167854331|gb|EDS25564.1| hypothetical protein HPS_02329 [Haemophilus parasuis 29755]
Length = 247
Score = 134 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 53/247 (21%), Positives = 101/247 (40%), Gaps = 27/247 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ W+F ++ + + F+ ML I + L L LS
Sbjct: 18 ILILWLFSLICFRLKWKKLGYLSTFLGVAMLYIFSIPYT--SQKLHDSL---VTEDNLSI 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K IVLL G + ++ S + R+ Y + Q ++I+G
Sbjct: 73 EDYKSAQAIVLLSGGLRDSKELFG-KLAISEIALERVR-----YAAFLQKETGLPLLITG 126
Query: 121 GDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
P+ G +E+ V +L + + LE ++ T +NA+FS +++ I+LV
Sbjct: 127 SSPK--GTSEAAVMKKELEQFFHIPTQ--WLEEKAKTTAENAKFSKPILEKEGINKIVLV 182
Query: 180 SSAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++ +H++R+++ F+ G + Y + IP S + ALKE+IG
Sbjct: 183 TNQWHMQRARMLFEREGFKILPASVGAGKMPETYGLNVFYFIPQSGALHSNMHALKEWIG 242
Query: 233 ILIAYYR 239
Y++
Sbjct: 243 ----YWK 245
>gi|256377332|ref|YP_003100992.1| hypothetical protein Amir_3239 [Actinosynnema mirum DSM 43827]
gi|255921635|gb|ACU37146.1| protein of unknown function DUF218 [Actinosynnema mirum DSM 43827]
Length = 336
Score = 134 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ +LL ++G+ +L L ++ + I++LG G
Sbjct: 123 WVLAAAGSLVLLAGYLGFAFTLFLLYSVLYGRVRK-------RTGHTAIIVLGAG----- 170
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+P R+ P R+ ++LY+ ++ SGG +E+ V N L E
Sbjct: 171 -VPGGRVTPLL--AGRLDRALKLYRRAAAKGASPVVVASGGQGPDEPASEAEVMANYLRE 227
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINT 199
G+ + + E +S T++N + SS+++ +++V+S+YH+ R+ + + G+
Sbjct: 228 RGIPDEALLEERESTSTWENLRLSSALLAERGVTGRLLVVTSSYHVPRAAILSRRAGLKA 287
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+A +++ L+E+ +L+ Y
Sbjct: 288 DVRGG-----------RTAWYFVPNAFLREFAALLVQYR 315
>gi|329571446|gb|EGG53133.1| hypothetical protein HMPREF9520_02827 [Enterococcus faecalis
TX1467]
Length = 401
Score = 134 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 103/237 (43%), Gaps = 37/237 (15%)
Query: 10 VSYWHLLCQSIRKIFFMSCFML---LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ LL + ++ F+L F F + + T+ + + +P K
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAFVFYNFLTVSTL------YQFNQP------KYTQ 218
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIISGGDPQK 125
+ I +LG+G +P + +RI + ++ YK+ + +++ I++SGG
Sbjct: 219 DYIDVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPD 271
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNI--ILVSSA 182
L ES+ L G+ DDI +E S +T +N +FS MI++ N I ++
Sbjct: 272 ELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNN 331
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R+ L+ + G+ + +A ++L ++E+I I++ Y R
Sbjct: 332 YHLFRAGLFARMAGLKADGIGA-----------KTAFYFLPNAFIREFIAIVVMYKR 377
>gi|260582799|ref|ZP_05850585.1| molybdate ABC transporter permease [Haemophilus influenzae NT127]
gi|260094125|gb|EEW78027.1| molybdate ABC transporter permease [Haemophilus influenzae NT127]
Length = 247
Score = 134 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 51/241 (21%), Positives = 101/241 (41%), Gaps = 19/241 (7%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+++ LI++ L + F++ + +I +LL + P L+
Sbjct: 18 TFVLLIIAAILYLVHFKKLAKFIALISFTWLYIISTPFTGLLLT---DNDDTPALTLDDY 74
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IV+LG G+ + A S Q E +R Y + Q ++ +G
Sbjct: 75 KQAQAIVILGGGSYPTKELYAETASGSPQ-----LERLR-YAAFLQKETGLPVLTTGYS- 127
Query: 124 QKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
G++E + +L + V +E ++ +T +NA F+ +++ + IILV++
Sbjct: 128 -LIGISEGDLMAKELNQFFNVPTQ--WIENKARNTEENASFTKNILVKDHIQKIILVTNQ 184
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILIAY 237
+H+KR++ F+ G + + + + S IP + LKE+IG A+
Sbjct: 185 WHMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAH 244
Query: 238 Y 238
Y
Sbjct: 245 Y 245
>gi|78188131|ref|YP_378469.1| hypothetical protein Cag_0148 [Chlorobium chlorochromatii CaD3]
gi|78170330|gb|ABB27426.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
Length = 251
Score = 134 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 51/247 (20%), Positives = 96/247 (38%), Gaps = 21/247 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ L + + + L +RK + L+ + L+ ++ R + P
Sbjct: 13 LPLGVVLIAIIVGTL----VRKQVLLWYAALVLWAFSIPTVADGLMHFVEG--NRTVALP 66
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + IV+LG + + R + LY++ K ++ +
Sbjct: 67 QTLHQADAIVVLGGMIRRVEGAAEGEWN---DAADRFEAGVTLYRAGK----APLLLFTR 119
Query: 121 GD--PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G + E + + L+ GV + L +T A + +++ + IIL
Sbjct: 120 GRMPWSPDAVPEGELLVERALQRGVPEAALGLTAPVANTEDEAADVARLLRERGAERIIL 179
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLN------AYYSIIPLSANFYLTELALKEYIG 232
V+SAYH++RSQL F+H G++ + D+ A P + Y +E AL+E IG
Sbjct: 180 VTSAYHMRRSQLLFEHTGLSVEPYPVDFRVDSYPEPAVLRFAPSAEALYRSETALRELIG 239
Query: 233 ILIAYYR 239
L +
Sbjct: 240 WLYYRVK 246
>gi|330685387|gb|EGG97045.1| putative membrane protein [Staphylococcus epidermidis VCU121]
Length = 320
Score = 134 bits (338), Expect = 9e-30, Method: Composition-based stats.
Identities = 49/240 (20%), Positives = 98/240 (40%), Gaps = 27/240 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M LS + LI+ S+ + ++ L S IG+ + L ++ S
Sbjct: 85 MCLSIMRLILFMSACFYISLSPLVIINGIALWLSLIGFTTLFAFLCY---LTWSSTFGSR 141
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + ++I++LG G P ++ R+ + +Y + +++SG
Sbjct: 142 HFNQSVDLIIVLGAGIFTEEVTPMLK--------ERLDRALEIYHYSEHK---PKLLVSG 190
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIIL 178
G + ESI L++ GV D+I LE QS +T N +S +I + I+
Sbjct: 191 GQGPDEPIPESIAMQRYLIKQGVPNDNILLEQQSTNTHTNFVYSKDIIHDYFVNMPKIVC 250
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+S +H+ R+ ++ I T S +F+ +++++G++ Y
Sbjct: 251 VTSQFHILRALKLAKNLDIPTYGVGSH----------TPYHFFHI-ALIRDFLGVMYQYR 299
>gi|315640651|ref|ZP_07895756.1| integral membrane protein [Enterococcus italicus DSM 15952]
gi|315483590|gb|EFU74081.1| integral membrane protein [Enterococcus italicus DSM 15952]
Length = 399
Score = 134 bits (338), Expect = 9e-30, Method: Composition-based stats.
Identities = 51/236 (21%), Positives = 95/236 (40%), Gaps = 29/236 (12%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPT--ILLKHLQFSYQRPLLSPQWKKDG 66
I + Q + F L +G+ ++ L L + + P K +
Sbjct: 165 IYLIFDFFLQPQSPWYIKIPFTYLSIVLGYLLMNFIIFLTATLLYQFYYP------KYNQ 218
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIIISGGDPQK 125
+ +++LG G I R+ P RI + Y + + S H +I+SGG
Sbjct: 219 DFLIVLGAGL-----INGERVTPLL--AKRIDRAILFYHTQRTKSGHPLKLIMSGGQGAD 271
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNIILVSSAY 183
+ E++ E GV D+ LE S T++N +FS +I+ + I VS+ Y
Sbjct: 272 EKVPEAVAMKQYACEQGVPESDVLLEANSSTTYENMRFSKELIEQSAVNDPKAIFVSNNY 331
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
H+ R+ ++ + ++ + +A +YL L+E+ IL+ + R
Sbjct: 332 HIFRAGIFARQAKLSAEGIGC-----------KTALYYLPNATLREFAAILVMHKR 376
>gi|257085087|ref|ZP_05579448.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
gi|256993117|gb|EEU80419.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
Length = 337
Score = 134 bits (338), Expect = 9e-30, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 146 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 194 TAKFVVSGGQGPDEPVAEAFAMKKYLLLQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 253
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 254 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 302
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 303 ALIREYIALLVHDKR 317
>gi|262197868|ref|YP_003269077.1| hypothetical protein Hoch_4693 [Haliangium ochraceum DSM 14365]
gi|262081215|gb|ACY17184.1| protein of unknown function DUF218 [Haliangium ochraceum DSM 14365]
Length = 247
Score = 134 bits (338), Expect = 9e-30, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 96/243 (39%), Gaps = 16/243 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSC---FMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
+L FL ++ LC R L ++ +LL LQ + P+
Sbjct: 10 VLPPGGFLSLAALGWLCARFRPRLGRGVMFTAWLFLWLASTPLVAGMLLVSLQTAPALPV 69
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ IV+L G + R P + +RI L QH I+
Sbjct: 70 VG--ELPPAQAIVILSAGQDLDAPEYG-RAMPDNDTLTRIAYGAHL-----QHRTALPIL 121
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
++GG A + V + L R + ++++T +NA+ +++++ + I
Sbjct: 122 VTGGAATPGSAAVAQVMLHTLESQLGARVR-WTDERAMNTHENARNAAAILSAEGIERIY 180
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY----SIIPLSANFYLTELALKEYIGI 233
LV+ A+H+ R+ F+ G++ + + + + + S+IP + T A E++G
Sbjct: 181 LVTHAWHMPRALRSFEAEGLDVVPAPTGFRDRPWRGPRSLIPRWSAIRDTYRAAHEWVGR 240
Query: 234 LIA 236
L
Sbjct: 241 LYY 243
>gi|310823295|ref|YP_003955653.1| hypothetical protein STAUR_6067 [Stigmatella aurantiaca DW4/3-1]
gi|309396367|gb|ADO73826.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 256
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 50/246 (20%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 2 LLSW-IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
L+W + IV L + + + + L++ ++ +
Sbjct: 15 PLTWGVLFIVLGLLLRRKRRLAAGLQVLGLAVLYTFSIEPVAGGLMRWVESG---AKETY 71
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + + +++LG G T + R E + + RI L + + +++SG
Sbjct: 72 RPEVVYDAVIVLGGGLDPDATERSGRPEYN-AAVERILRGYELLREGRARH----VLLSG 126
Query: 121 GDPQKHGLA--ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G A E+ V +LL G+ + I +E S +T +NA S +I+ K ++L
Sbjct: 127 GSLDTRPEAVIEATVLQRQLLAWGIAPERIVVEGHSRNTRENALDSKKLIEERGWKTLLL 186
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGIL 234
++SA HL R+ F G+ +D + S +P + + + AL+E G +
Sbjct: 187 ITSAAHLPRAYGCFAAVGLRPDTLAADVRASDGKRPPSWLPRANHLSASTDALRELAGRV 246
Query: 235 IAYYRG 240
+ RG
Sbjct: 247 VYRLRG 252
>gi|315221464|ref|ZP_07863385.1| integral membrane protein with DUF218 domain protein [Streptococcus
anginosus F0211]
gi|315189583|gb|EFU23277.1| integral membrane protein with DUF218 domain protein [Streptococcus
anginosus F0211]
Length = 333
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 86/180 (47%), Gaps = 24/180 (13%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K + I++LG+G P + R+ + +Y+ H I++SGG
Sbjct: 159 KHPDYIIILGSGLIGDKVPPLL--------AQRLEKGKTMYEKFHNH---PKIVVSGGQG 207
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSS 181
+ E+ L + G+ ++DI +E QS +T +N +FS +++ + K ++V++
Sbjct: 208 VDEPITEAEAMAQYLRQVGIPQEDIIIERQSTNTLENLRFSKAILDETREKNYRCLVVTN 267
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++H R+ +Y + G+ ++ S +A ++L ++E +G+++ Y++ +
Sbjct: 268 SFHSLRAGIYMRKIGLKGRSIGS-----------RTAPYFLPSSWIRETLGLIVLYWKWH 316
>gi|283471580|emb|CAQ50791.1| membrane protein [Staphylococcus aureus subsp. aureus ST398]
Length = 322
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 45/237 (18%), Positives = 99/237 (41%), Gaps = 36/237 (15%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
S + I + + + + + C L+ +FI + + + +
Sbjct: 97 SALLFISTIQSPIVKGMSMWLAILCLSLILTFICYLV------------WTVSYRHRSYT 144
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K+ +II++LG G P + +R+ + +Y+ + II+SGG
Sbjct: 145 KEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQASAT---KIIVSGGQG 193
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNIILVSS 181
++E++ L+ GV++ DI +E+ S++T+ N +S +I N + I+ V+S
Sbjct: 194 PDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIVCVTS 253
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+H+ R+ Q G++ S + + + +K+Y+G++ Y
Sbjct: 254 QFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQYR 299
>gi|256959075|ref|ZP_05563246.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|257079106|ref|ZP_05573467.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|256949571|gb|EEU66203.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256987136|gb|EEU74438.1| conserved hypothetical protein [Enterococcus faecalis JH1]
Length = 337
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 146 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 194 TAKFVVSGGQGPDEPVAEAFAMKKYLLLQNIPAEAILMEDQSTTTYENMLFSKAIIQADW 253
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 254 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 302
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 303 ALIREYIALLVHDKR 317
>gi|289207946|ref|YP_003460012.1| hypothetical protein TK90_0761 [Thioalkalivibrio sp. K90mix]
gi|288943577|gb|ADC71276.1| protein of unknown function DUF218 [Thioalkalivibrio sp. K90mix]
Length = 262
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 87/217 (40%), Gaps = 21/217 (9%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
++ L L+ + +L+ + IV+LG G + A + +++ R
Sbjct: 52 SLQVVAQPLADTLEREVRDSVLA---TGRADAIVILGGGRWVGRAEDAGHDALNPRTHER 108
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHG--LAESIVYNNKLLESGVERDDIKLETQS 154
+ RL+++ I++SGG P+ +E+ + L + + LE S
Sbjct: 109 VRAGARLHRA-----TDLPIVVSGGTPRALPGRRSEAELMAATL-QQDLGVSARWLENTS 162
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL------N 208
+T +NA + ++ + +++V+ A HL R+ F+ G + + + +
Sbjct: 163 RNTCENATHTRQRLQGQGVEAVLVVTQAMHLPRALECFERAGFDAYPAPAGFRGTTGEPR 222
Query: 209 AYYSIIPLSANFYLTELALKEYIGI----LIAYYRGN 241
+P + + AL+E++ L RG+
Sbjct: 223 GLQDFLPTAEAIETSRFALREWLARVALPLRERLRGS 259
>gi|289550052|ref|YP_003470956.1| membrane protein [Staphylococcus lugdunensis HKU09-01]
gi|289179584|gb|ADC86829.1| membrane protein [Staphylococcus lugdunensis HKU09-01]
Length = 317
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 25/213 (11%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
F LF + I T+ L + + I++LG G P +
Sbjct: 109 VFTGLFIWFSLIAISTLTTFALYLCFSSAFGRMTNHCTFDGIIVLGAGIFTEAVTPLL-- 166
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
SR+ + +Y HCTII+SGG + ++E++ LL GV
Sbjct: 167 ------ASRLNRALSIYNQQ----SHCTIIVSGGQGKDEPISEALAMKRYLLSHGVPEQS 216
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I +E S +T +N +S S+I M K +++V+S +H+ R+ + Q FG+ + S
Sbjct: 217 IIMEAHSTNTAENFLYSKSIIDAMTPKPNKLLVVTSQFHILRALRFAQKFGLPVQGIGS- 275
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ L +++++G++ Y
Sbjct: 276 ----------STPCHLLARSLIRDFLGLMHQYK 298
>gi|47566094|ref|ZP_00237132.1| uncharacterized conserved membrane protein of SANA family CAC0441
[Bacillus cereus G9241]
gi|47557011|gb|EAL15341.1| uncharacterized conserved membrane protein of SANA family CAC0441
[Bacillus cereus G9241]
Length = 192
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 80/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 39 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 86
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 87 GEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 145
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 146 MFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWF 188
>gi|315659320|ref|ZP_07912184.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
gi|315495745|gb|EFU84076.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
Length = 317
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
+ FS I + T L +L FS ++ DG I++LG G P +
Sbjct: 113 LFIWFSLIAISTLTTFAL-YLCFSSAFGRMTNHCTFDG--IIVLGAGIFTEAVTPLL--- 166
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
SR+ + +Y HCTII+SGG + ++E++ LL GV I
Sbjct: 167 -----ASRLNRALSIYNQQ----SHCTIIVSGGQGKDEPISEALAMKRYLLSHGVPEQSI 217
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+E S +T +N +S S+I M K +++V+S +H+ R+ + Q FG+ + S
Sbjct: 218 IMEAHSTNTAENFLYSKSIIDAMTPKPNKLLVVTSQFHILRALRFAQKFGLPVQGIGS-- 275
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ L +++++G++ Y
Sbjct: 276 ---------STPCHLLARSLIRDFLGLMHQYK 298
>gi|3056882|gb|AAC14002.1| unknown [Actinosynnema pretiosum subsp. auranticum]
Length = 336
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 89/219 (40%), Gaps = 27/219 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ LL ++G+ +L L ++ + IV+LG G
Sbjct: 123 WVLAAAGSLFLLAGYLGFAFTLFLLYSVLYGRVRK-------RTGHTAIVVLGAG----- 170
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
+P R+ P R+ ++LY+ ++ SGG +E+ V N L E
Sbjct: 171 -VPGGRVTPLL--AGRLDRALKLYRRAAAKGASPLVVASGGQGPDEPASEAEVMANYLRE 227
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINT 199
G+ + + E +S T++N + SS+++ +++V+S+YH+ R+ + + G+
Sbjct: 228 RGIPDEALLEERESTSTWENLRLSSALLAERGVTGRLLVVTSSYHVPRAAILSRRAGLKA 287
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+A +++ L+E+ +L+ Y
Sbjct: 288 DVRGG-----------RTAWYFVPNAFLREFAALLVQYR 315
>gi|115380347|ref|ZP_01467350.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|115362646|gb|EAU61878.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
Length = 233
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 95/221 (42%), Gaps = 15/221 (6%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+ +L++F + L++ ++ + + + + +++LG G T +
Sbjct: 18 VLGLAVLYTF-SIEPVAGGLMRWVESG---AKETYRPEVVYDAVIVLGGGLDPDATERSG 73
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA--ESIVYNNKLLESGV 143
R E + + RI L + + +++SGG A E+ V +LL G+
Sbjct: 74 RPEYN-AAVERILRGYELLREGRARH----VLLSGGSLDTRPEAVIEATVLQRQLLAWGI 128
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ I +E S +T +NA S +I+ K ++L++SA HL R+ F G+
Sbjct: 129 APERIVVEGHSRNTRENALDSKKLIEERGWKTLLLITSAAHLPRAYGCFAAVGLRPDTLA 188
Query: 204 SDYLNA----YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+D + S +P + + + AL+E G ++ RG
Sbjct: 189 ADVRASDGKRPPSWLPRANHLSASTDALRELAGRVVYRLRG 229
>gi|268608564|ref|ZP_06142291.1| hypothetical protein RflaF_03567 [Ruminococcus flavefaciens FD-1]
Length = 254
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 26/240 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L+ IF+ + L SI + F++L S + G I +L L S R + P
Sbjct: 40 VLTVIFVFHGRFTSLVSSIWEKPVGKVFIVLISLLMAGGI--VLASVLSVSMAREMNDPP 97
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+D ++VL G + PS R+ YK H C + +SGG
Sbjct: 98 QNEDTTLVVL---GCKVKDGR------PSLMLSRRLNAA---YKYMSGHETVCAV-VSGG 144
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILVS 180
++E+ L E G++ I +E +S T +N +FS +I + + LV+
Sbjct: 145 QGSDEVMSEAECMKIYLTEKGIDPQRIFMEDKSTTTKENLEFSKKLIAENGLPQKVTLVT 204
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+H R+++ + GI++ + S Y ++ + + ++E+ GI+ G
Sbjct: 205 DGFHQLRAEMLAEKTGISSPYNISGY----------TSWYIVPTYWVREWFGIVFYKLFG 254
>gi|227815532|ref|YP_002815541.1| hypothetical protein BAMEG_2945 [Bacillus anthracis str. CDC 684]
gi|229604535|ref|YP_002866117.1| hypothetical protein BAA_1717 [Bacillus anthracis str. A0248]
gi|227002403|gb|ACP12146.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|229268943|gb|ACQ50580.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
Length = 178
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 25 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 72
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 73 GEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 131
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 132 MFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWF 174
>gi|145629203|ref|ZP_01785002.1| hypothetical protein CGSHi22121_10385 [Haemophilus influenzae
22.1-21]
gi|145639142|ref|ZP_01794749.1| hypothetical protein CGSHiII_03869 [Haemophilus influenzae PittII]
gi|144978706|gb|EDJ88429.1| hypothetical protein CGSHi22121_10385 [Haemophilus influenzae
22.1-21]
gi|145271704|gb|EDK11614.1| hypothetical protein CGSHiII_03869 [Haemophilus influenzae PittII]
gi|309750723|gb|ADO80707.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
Length = 247
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 51/241 (21%), Positives = 102/241 (42%), Gaps = 19/241 (7%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+++ LI++ L + F++ + +I +LL + P L+
Sbjct: 18 TFVLLIIAAILYLVHFKKLAKFIALISFTWLYIISTPFTGLLLT---DNDDTPALTLDDY 74
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IV+LG G+ + A S Q E +R Y + Q ++ +G
Sbjct: 75 KQAQAIVILGGGSYPTKELYAETASGSPQ-----LERLR-YAAFLQKETGLPVLTTGYS- 127
Query: 124 QKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
G++E + +L + V +E ++ +T +NA F+ +++ + IILV++
Sbjct: 128 -LIGISEGDLMAKELNQFFNVPTQ--WIENKARNTEENASFTKNILIKDNIQKIILVTNQ 184
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILIAY 237
+H+KR++ F+ G + + + ++ S IP + LKE+IG A+
Sbjct: 185 WHMKRAKYLFEKQGFDVLPAAAASYSSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAH 244
Query: 238 Y 238
Y
Sbjct: 245 Y 245
>gi|109897531|ref|YP_660786.1| hypothetical protein Patl_1206 [Pseudoalteromonas atlantica T6c]
gi|109699812|gb|ABG39732.1| protein of unknown function DUF218 [Pseudoalteromonas atlantica
T6c]
Length = 251
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 15/231 (6%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLL 72
L Q R + SC +L+ + P++LL K L+ Y LS + + IV+L
Sbjct: 28 RLPLQGRRIYQWASCVPILWVLFCSLVYPSVLLIKPLEDQYPTIKLSSNEWQLTDGIVVL 87
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL-AES 131
+P + P R +Y I ++ G + L +++
Sbjct: 88 ACNHFDDDGLPFVSKWPQCTM-QRNLHAALMYNEKP-----LPIYLAAGILNETDLKSQA 141
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ L+ GV DI DT + + ++N K++ LVSSA HL R+ Y
Sbjct: 142 QYNKDFLVTLGVNPKDIHTFPMGHDTESEVEALAPYLQN---KHMALVSSASHLPRAVEY 198
Query: 192 FQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAYY 238
F+ G++ ++L+ ++ +P + + Y +E A+ EY+G++ Y
Sbjct: 199 FRLHGLSVLPIPVEHLSRKHVSFTIGLPNAYSLYRSERAIHEYLGLIYQRY 249
>gi|307705359|ref|ZP_07642221.1| conserved hypothetical protein [Streptococcus mitis SK597]
gi|307621146|gb|EFO00221.1| conserved hypothetical protein [Streptococcus mitis SK597]
Length = 259
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 38/246 (15%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMS--CFMLLFSFI-------GWGIIPTILLKHLQF 51
MLL + L+ R F + +LF+FI G+ + IL L
Sbjct: 15 MLLGIVILLFFALMSFRLGGRHELFYTNHFLNILFAFIAYSYFIFGFAFVAFILYSIL-- 72
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
L KK + I++ G G + ++ P + RI + + Y K +
Sbjct: 73 -----YLFIPKKKHYDFIIIHGAGL-----LDGEKVTPLLKR--RIDKAVEAY--YKSKN 118
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ II SGG ++E+ N LLE V +D I LE QS T++N FS + +
Sbjct: 119 SNIKIIASGGKGADEKISEAQAITNYLLEETDVPQDAIILEDQSRTTYENLLFSKELGEE 178
Query: 171 MQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
+ K + V++ YH+ R+ Y + + +A +Y+ ++E
Sbjct: 179 LVAKPQFLFVTNDYHVFRTSTYARKLNMKGDGLGC-----------RTAGYYIPSAFIRE 227
Query: 230 YIGILI 235
Y+ + +
Sbjct: 228 YVALCV 233
>gi|145631591|ref|ZP_01787357.1| hypothetical protein CGSHi22421_02276 [Haemophilus influenzae
R3021]
gi|144982791|gb|EDJ90317.1| hypothetical protein CGSHi22421_02276 [Haemophilus influenzae
R3021]
Length = 247
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 51/241 (21%), Positives = 101/241 (41%), Gaps = 19/241 (7%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+++ LI++ + F++ + +I +LL + S P L+
Sbjct: 18 TFVLLIIATILYRVHFKKLAKFLAIISFTWLYIMSAPFTGLLLTNNDDS---PALTLDKY 74
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IV+LG G + P + S + E +R Y + Q I+ +G
Sbjct: 75 KQAQAIVILGGG-----SYPTKELYAETASGAPQLERLR-YAAFLQKETGLPILTTGYS- 127
Query: 124 QKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
G++E + +L + V +E ++ +T +NA F+ +++ + IILV++
Sbjct: 128 -LIGISEGDLMAKELNQFFNVPTQ--WIENKARNTEENASFTKNILIKDHIQKIILVTNQ 184
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILIAY 237
+H+KR++ F+ G + + + + S IP + LKE+IG A+
Sbjct: 185 WHMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAH 244
Query: 238 Y 238
Y
Sbjct: 245 Y 245
>gi|320140100|gb|EFW31959.1| conserved domain protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143369|gb|EFW35150.1| conserved domain protein [Staphylococcus aureus subsp. aureus
MRSA177]
Length = 208
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ K+ +II++LG G P + +R+ + +Y+ + II+SGG
Sbjct: 29 YNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQASAT---KIIVSGG 77
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNIILV 179
++E++ L+ GV++ DI +E+ S++T+ N +S +I N + I+ V
Sbjct: 78 QGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIVCV 137
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S +H+ R+ Q G++ S + + + +K+Y+G++ Y
Sbjct: 138 TSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQYR 185
>gi|218290184|ref|ZP_03494343.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
gi|218239779|gb|EED06969.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
Length = 259
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 55/253 (21%), Positives = 102/253 (40%), Gaps = 26/253 (10%)
Query: 2 LLSWIFLIVSYWH--LLCQSIRKIFFMSCFMLLFSFIGWGI-IPTILLKHLQFSYQRPLL 58
L +F +++ LL + R + L + +LL L+ +Y P
Sbjct: 13 LPPGLFASITFALSVLLARHRRGFAIAFAAVSLAFAAACTPAVGNLLLIPLERAYAPPA- 71
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF----QSYSRIFETMRLYKSCKQHSMHC 114
+ G+ IV+LG G + A + S R+ LY+ +H
Sbjct: 72 ----RPTGDAIVVLGAGFSAAAPDFADPAANTGTLYGDSGERVLAAAALYRR-----LHL 122
Query: 115 TIIISGG---DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
I++SGG A +++ L GV ++ ++ S T +NA+ +++++ +
Sbjct: 123 PIVLSGGPLIRANGKSYAFALIAARDLAALGVPARELYVDATSRTTEENAEHTAAILHRL 182
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY------YSIIPLSANFYLTEL 225
ILV+SA + R+ + F+ G+ + Y+ + Y+ +P A T
Sbjct: 183 HRSRPILVASAAQMARAVIDFRRVGVKVEPYPVGYVASPVPTPLAYAWLPSEAGLDETCT 242
Query: 226 ALKEYIGILIAYY 238
AL E +GIL A
Sbjct: 243 ALHEDLGILAARL 255
>gi|309972903|gb|ADO96104.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 247
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 100/241 (41%), Gaps = 19/241 (7%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+++ LI++ + F++ + +I +LL + P L+
Sbjct: 18 TFVLLIIAAILYRVHFKKLAKFIAFIGFTWLYIMSAPFTGLLLT---DNDDTPALTLDDY 74
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IV+LG G+ + A S Q E +R Y + Q ++ +G
Sbjct: 75 KQAQAIVILGGGSYPTKELYAETASGSPQ-----LERLR-YAAFLQKETGLPVLTTGYS- 127
Query: 124 QKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
G++E + +L + V +E ++ +T +NA F+ +++ + IILV++
Sbjct: 128 -LIGISEGDLMAKELNQFFNVPTQ--WIENKARNTEENASFTKNILIKDHIQKIILVTNQ 184
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILIAY 237
+H+KR++ F+ G + + + + S IP + LKE+IG A+
Sbjct: 185 WHMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAH 244
Query: 238 Y 238
Y
Sbjct: 245 Y 245
>gi|47526931|ref|YP_018280.1| hypothetical protein GBAA_1645 [Bacillus anthracis str. 'Ames
Ancestor']
gi|65318981|ref|ZP_00391940.1| COG1434: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
gi|47502079|gb|AAT30755.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
Length = 172
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 19 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 66
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 67 GEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 125
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 126 MFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWF 168
>gi|228914293|ref|ZP_04077908.1| hypothetical protein bthur0012_15250 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228926749|ref|ZP_04089817.1| hypothetical protein bthur0010_14650 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|229121266|ref|ZP_04250497.1| hypothetical protein bcere0016_15720 [Bacillus cereus 95/8201]
gi|228662111|gb|EEL17720.1| hypothetical protein bcere0016_15720 [Bacillus cereus 95/8201]
gi|228832862|gb|EEM78431.1| hypothetical protein bthur0010_14650 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228845287|gb|EEM90323.1| hypothetical protein bthur0012_15250 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 159
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 6 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 53
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 54 GEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 112
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 113 MFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWF 155
>gi|322385255|ref|ZP_08058902.1| hypothetical protein HMPREF9422_0267 [Streptococcus cristatus ATCC
51100]
gi|321270879|gb|EFX53792.1| hypothetical protein HMPREF9422_0267 [Streptococcus cristatus ATCC
51100]
Length = 337
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 46/234 (19%), Positives = 98/234 (41%), Gaps = 31/234 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
++ H L +S LL + + + I+ + KK+ I
Sbjct: 111 LALLHFLAPRSFLAILISFADLLLFYGTFLYLSYIIYAFFLNIFPV-------KKEPQTI 163
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG G P + R+ + + +Y+ + II+SGG ++
Sbjct: 164 IILGAGLFGDKVPPLL--------AQRLDKGIAIYEKFNRK---PVIIVSGGQGDDEWIS 212
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKR 187
E+ L+E GV D I LE +S T +N FS ++ + ++ ++LV++++H R
Sbjct: 213 EAEAMAGYLMEKGVPADSIFLENKSRTTLENLIFSKELMLSQGLEQDRVLLVTNSFHALR 272
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ +Y + G+ ++ S +A ++L ++E G++ Y++ +
Sbjct: 273 AGIYMRQVGLKGRSIGS-----------RTAFYFLPSAWIRETAGLIRIYWKWH 315
>gi|134100940|ref|YP_001106601.1| hypothetical protein SACE_4407 [Saccharopolyspora erythraea NRRL
2338]
gi|291003446|ref|ZP_06561419.1| hypothetical protein SeryN2_02872 [Saccharopolyspora erythraea NRRL
2338]
gi|133913563|emb|CAM03676.1| hypothetical membrane spanning protein [Saccharopolyspora erythraea
NRRL 2338]
Length = 331
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 44/257 (17%), Positives = 100/257 (38%), Gaps = 44/257 (17%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL----LKHLQFS---------- 52
FLIV+ ++ + ++ + IG + + LQ +
Sbjct: 75 FLIVNGVTMMRREGKRPANLLSLAAGLGIIGIVAVKALANITRWLPLQVAVEAVSDVLAY 134
Query: 53 ----------YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
Y + ++D + IV+LG+G R+ P R+
Sbjct: 135 VSLLFVCFLLYSFVYGRIRHRRDVDFIVVLGSGLI------GSRVPPLL--AGRLDRARA 186
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
+++ + ++ SGG L E+ + L+ GV D I +E QS T +N +
Sbjct: 187 AFEAEEAKGRRPVLVTSGGQGPGEDLPEARAMADYLIAQGVPEDRILVEDQSRSTEENLR 246
Query: 163 FSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFY 221
FS ++++ + ++V++++H+ R+ + +N + S +A ++
Sbjct: 247 FSKAIMRERRPDYRCLVVTNSFHVMRAARIARGEKVNAQVIGS-----------RTARYF 295
Query: 222 LTELALKEYIGILIAYY 238
L ++E++ + +A+
Sbjct: 296 LPSATIREFVAVFLAHR 312
>gi|116334676|ref|YP_796203.1| hypothetical protein LVIS_2118 [Lactobacillus brevis ATCC 367]
gi|116100023|gb|ABJ65172.1| hypothetical protein LVIS_2118 [Lactobacillus brevis ATCC 367]
Length = 357
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 43/246 (17%), Positives = 87/246 (35%), Gaps = 25/246 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFF--MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
ML ++ L + + + F+ LF + + +L
Sbjct: 110 MLTLFLGLAILLAPFFSRWAALNLSKPVDTFINLFPSLVITYVLFWFYNYLTMLVLYQFN 169
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-II 117
P++ + + +++LG G + S RI + Y+ + +I
Sbjct: 170 RPRYNQ--DFLIVLGAGLLNGNEV-------SPLLGRRIDRALTFYRKQLAKTGQAPMVI 220
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--N 175
SGG + E + + G+ + +E QS T++N FS +I +
Sbjct: 221 FSGGQGGDETVPEGRAMRDYAIAHGLPAEQALVEDQSKTTYENMVFSKQLIAATGQQRPR 280
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ V++ YH R+ + + G+ + +A F+L L+EYI I +
Sbjct: 281 VTFVTNGYHTFRAGMIARKAGLKANGIGAH-----------TAKFFLPNAILREYIAIFV 329
Query: 236 AYYRGN 241
R +
Sbjct: 330 GNKRWH 335
>gi|153941422|ref|YP_001392099.1| hypothetical protein CLI_2871 [Clostridium botulinum F str.
Langeland]
gi|152937318|gb|ABS42816.1| putative membrane protein [Clostridium botulinum F str. Langeland]
gi|295320103|gb|ADG00481.1| putative membrane protein [Clostridium botulinum F str. 230613]
Length = 351
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 95/239 (39%), Gaps = 24/239 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + W +I + + +FI + I ++ + + +K
Sbjct: 104 LGIFIILWIWFTPNIIRGVTNPILTAIIAFITFLITYFFMMMFIFAISAAINIYMPKRKK 163
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + SRI + + +YK + II +G
Sbjct: 164 YDYIIVLGSGLIGDRVPPLL--------ASRIDKGIEIYKRQLKKGNPSKIIFTGAKGAD 215
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-----NIILVS 180
++E + + G+ + + +E Q+++T++N S +++ I+V+
Sbjct: 216 EKISEGLAMWKYAKDKGIPTEHMIIEDQAVNTYENLYNSKKLLEEDHKAREKEYRCIVVT 275
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL RS ++ + G+ + S + ++ ++EYIG++ Y +
Sbjct: 276 NNFHLFRSLIWARIVGLECDGAGS-----------KTKLYFSLNALIREYIGVMYIYKK 323
>gi|148827124|ref|YP_001291877.1| hypothetical protein CGSHiGG_02255 [Haemophilus influenzae PittGG]
gi|148718366|gb|ABQ99493.1| molybdate ABC transporter permease protein [Haemophilus influenzae
PittGG]
Length = 247
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 51/241 (21%), Positives = 100/241 (41%), Gaps = 19/241 (7%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+++ LI++ L + F+ + +I +LL + P L+
Sbjct: 18 TFVLLIIAAILYLVHFKKLAKFIVLISFTWLYIMSAPFTGLLLT---DNDDIPALTLDEY 74
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IV+LG G + P + S + E +R Y + Q I+ +G
Sbjct: 75 KQAQAIVILGGG-----SYPTKELYAETASGAPQLERLR-YAAFLQKETGLPILTTGYS- 127
Query: 124 QKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
G++E + +L + V +E ++ +T +NA F+ +++ + IILV++
Sbjct: 128 -LIGISEGDLMAKELNQFFNVPTQ--WIENKARNTEENASFTKNILIKDHIQKIILVTNQ 184
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILIAY 237
+H+KR++ F+ G + + + + S IP + LKE+IG A+
Sbjct: 185 WHMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAH 244
Query: 238 Y 238
Y
Sbjct: 245 Y 245
>gi|229090673|ref|ZP_04221906.1| hypothetical protein bcere0021_14970 [Bacillus cereus Rock3-42]
gi|228692615|gb|EEL46341.1| hypothetical protein bcere0021_14970 [Bacillus cereus Rock3-42]
Length = 172
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 19 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 66
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 67 GEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 125
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 126 MFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWF 168
>gi|218902828|ref|YP_002450662.1| hypothetical protein BCAH820_1711 [Bacillus cereus AH820]
gi|218538682|gb|ACK91080.1| conserved hypothetical protein [Bacillus cereus AH820]
Length = 192
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 39 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 86
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 87 GEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 145
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 146 MFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWF 188
>gi|52143746|ref|YP_083083.1| hypothetical protein BCZK1488 [Bacillus cereus E33L]
gi|51977215|gb|AAU18765.1| conserved hypothetical protein [Bacillus cereus E33L]
Length = 192
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 39 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 86
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 87 GEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 145
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 146 MFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWF 188
>gi|49184541|ref|YP_027793.1| hypothetical protein BAS1526 [Bacillus anthracis str. Sterne]
gi|49477297|ref|YP_035830.1| hypothetical protein BT9727_1498 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|165869545|ref|ZP_02214204.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167633396|ref|ZP_02391721.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167639097|ref|ZP_02397370.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170686196|ref|ZP_02877418.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170706539|ref|ZP_02896999.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177650599|ref|ZP_02933566.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190566262|ref|ZP_03019180.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|254683202|ref|ZP_05147063.1| hypothetical protein BantC_05040 [Bacillus anthracis str.
CNEVA-9066]
gi|254723792|ref|ZP_05185578.1| hypothetical protein BantA1_15178 [Bacillus anthracis str. A1055]
gi|254734554|ref|ZP_05192266.1| hypothetical protein BantWNA_05205 [Bacillus anthracis str. Western
North America USA6153]
gi|254740963|ref|ZP_05198651.1| hypothetical protein BantKB_08062 [Bacillus anthracis str. Kruger
B]
gi|254755205|ref|ZP_05207239.1| hypothetical protein BantV_22267 [Bacillus anthracis str. Vollum]
gi|254759741|ref|ZP_05211765.1| hypothetical protein BantA9_15636 [Bacillus anthracis str.
Australia 94]
gi|270000571|ref|NP_844092.2| hypothetical protein BA_1645 [Bacillus anthracis str. Ames]
gi|49178468|gb|AAT53844.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|49328853|gb|AAT59499.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|164714985|gb|EDR20503.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167512887|gb|EDR88260.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167531434|gb|EDR94112.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170128637|gb|EDS97504.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170669893|gb|EDT20634.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172083743|gb|EDT68803.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190562397|gb|EDV16364.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|269850294|gb|AAP25578.2| conserved hypothetical protein [Bacillus anthracis str. Ames]
Length = 192
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 39 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 86
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 87 GEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 145
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 146 MFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWF 188
>gi|331004989|ref|ZP_08328398.1| hypothetical protein IMCC1989_103 [gamma proteobacterium IMCC1989]
gi|330421202|gb|EGG95459.1| hypothetical protein IMCC1989_103 [gamma proteobacterium IMCC1989]
Length = 144
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
Y +I+SGG+ + + L++ + D E +S +T++NA F
Sbjct: 3 YGGYLAKRWDLPVIVSGGNVRSFDVVSEADMGVYFLQNELNVDIAWPEGESRNTWENAHF 62
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLS 217
+ M+ ++ LV+ AYH+ RS FQ G+ + L+ + + +P +
Sbjct: 63 TKKMLDKQSIHHVALVTHAYHMPRSVYAFQQAGLTVSPMPTGQLSQQSSTSYWLNWLPSA 122
Query: 218 ANFYLTELALKEYIGILIAYYR 239
+++ LAL EY+G+L +
Sbjct: 123 GALHISRLALHEYLGLLFYSLK 144
>gi|157149755|ref|YP_001450471.1| GdmH [Streptococcus gordonii str. Challis substr. CH1]
gi|157074549|gb|ABV09232.1| GdmH [Streptococcus gordonii str. Challis substr. CH1]
Length = 340
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 46/263 (17%), Positives = 111/263 (42%), Gaps = 44/263 (16%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG---------------------WG 39
++ S +FL+ + ++ +++ + + IG +
Sbjct: 74 IIFSTVFLLFNGRQMMSFEGKRLGNLLSLLYGIFIIGALALHFLPYFPGKDLLIYPTDFA 133
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
+ + L Y + + + I++LG+G P + R+ +
Sbjct: 134 LFYSTFLYLSYVLYGTFCNYFPVRIEPDAIIVLGSGLIGDKVPPLL--------AQRLTK 185
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+Y+ + +I+SGG +E+ N L+E GV++D I +E +S TF+
Sbjct: 186 GKTIYEQFEGR---PKLIVSGGQGADELTSEAAAMANYLMEQGVQKDAILIENRSRTTFE 242
Query: 160 NAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
N FS ++++ GK++++V++++H R+ ++ + I ++ S +A
Sbjct: 243 NLTFSKAILEEQGLGKSVLVVTNSFHALRAGVFMRRLKIPGRSVGS-----------KTA 291
Query: 219 NFYLTELALKEYIGILIAYYRGN 241
+YL ++E +G++ Y++ +
Sbjct: 292 FYYLPSAWIRETVGLVSLYWKWH 314
>gi|228932998|ref|ZP_04095861.1| hypothetical protein bthur0009_14690 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228826599|gb|EEM72370.1| hypothetical protein bthur0009_14690 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 194
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS K+ I+SGG +
Sbjct: 41 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHKKAIA----IVSGGKGK 88
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E S T +N +FS +I + K +I V++ +H
Sbjct: 89 GEDISEALAMKNELMKLNIAEDRIIMEDTSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 147
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 148 MFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWF 190
>gi|220929859|ref|YP_002506768.1| hypothetical protein Ccel_2459 [Clostridium cellulolyticum H10]
gi|220000187|gb|ACL76788.1| protein of unknown function DUF218 [Clostridium cellulolyticum H10]
Length = 256
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 37/229 (16%), Positives = 89/229 (38%), Gaps = 27/229 (11%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
I+ + + + L+ F G ++ + + P ++ +
Sbjct: 45 IILWALFKKTGLYRKKQNLFGKLIKVFTGLFLVWLVSFIIITAIIIT-SAIPDKEQQVDS 103
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+++LG G P+ R+ T+ YK + II+SGG + +
Sbjct: 104 VIVLGAGLK--------GETPTLVLKKRLDYTLEYYK----LNPDVRIIVSGGQGKGETI 151
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHL 185
E+ L++ + + I E +S T++N Q+S ++ +N GK ++++++ +H+
Sbjct: 152 TEAEAMKRYLVKHNIHENIILKEERSTSTYENMQYSKNLYENTMGKPLGKVMIITNDFHM 211
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
R+++ + G+ S + + + L+EY +
Sbjct: 212 FRAKILAKRAGLKPYGISSG-----------TPWYLYPNVCLREYFALF 249
>gi|196039056|ref|ZP_03106363.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196030201|gb|EDX68801.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
Length = 192
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 80/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 39 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 86
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S+ T +N +FS +I + K +I V++ +H
Sbjct: 87 GEDISEALAMKNELMKLNIAEDRIIMEDKSMSTDENIKFSKPLIPDNMKKGMI-VTNDFH 145
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 146 MFRAKKIAAKQGLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWF 188
>gi|54295467|ref|YP_127882.1| hypothetical protein lpl2553 [Legionella pneumophila str. Lens]
gi|53755299|emb|CAH16793.1| hypothetical protein lpl2553 [Legionella pneumophila str. Lens]
Length = 250
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 56/242 (23%), Positives = 111/242 (45%), Gaps = 20/242 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L I + + Y L + + F+ +LL GW +P+ L L+ Y +
Sbjct: 19 LLTLGICIFLLYRRLAPTFTKVMLFVVLLVLLAMSTGW--LPSYLTYQLESRYP---IVK 73
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG G I +PA + S S R+ E +RL+++ +++SG
Sbjct: 74 RVNPNVKWVVVLGGGQNIGEEMPANDLLTS-ASIKRLIEGVRLFRTL----PDAKLLLSG 128
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E+++ ++ + + +ET S++T A ++++ + + LV+
Sbjct: 129 GGSAGE-QSEALLLTELAKWFAIDSEKVVVETASINTADQAHELAAIVHD---QPFYLVT 184
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIGIL 234
SA H+ RS Q G++ A+ +D+ + + +IP S N T +AL E +G +
Sbjct: 185 SAIHMPRSMALCQQQGLHPIAAPTDFTFFWSTDTWVKMVIPNSYNLAYTSIALHEILGKI 244
Query: 235 IA 236
A
Sbjct: 245 WA 246
>gi|187778595|ref|ZP_02995068.1| hypothetical protein CLOSPO_02190 [Clostridium sporogenes ATCC
15579]
gi|187772220|gb|EDU36022.1| hypothetical protein CLOSPO_02190 [Clostridium sporogenes ATCC
15579]
Length = 351
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 40/239 (16%), Positives = 95/239 (39%), Gaps = 24/239 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + W +I + + FI + I ++ + +K
Sbjct: 104 LGIFIILWIWFTPNIIRGVTNPILTGIIGFITFLISYFFMMMFIFAISAAINTYMPKRKK 163
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + SRI + + +YK+ + II +G
Sbjct: 164 YDYIIVLGSGLIGDRVPPLL--------ASRIDKGIEIYKNQLEKGHPSKIIFTGAKGAD 215
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-----NIILVS 180
++E + + G+ + + +E Q+++T++N S +++ G I+V+
Sbjct: 216 EKISEGLAMWKYAKDKGIPNEHMIIEDQAVNTYENLSNSKKLLEEDYGTREKQYRCIVVT 275
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL RS ++ + G+ + S + ++ ++EYIG++ Y +
Sbjct: 276 NNFHLFRSLIWARIVGLECDGAGS-----------KTKLYFSLNALIREYIGVMYIYKK 323
>gi|145641039|ref|ZP_01796620.1| hypothetical protein CGSHiR3021_08216 [Haemophilus influenzae
R3021]
gi|145274200|gb|EDK14065.1| hypothetical protein CGSHiR3021_08216 [Haemophilus influenzae
22.4-21]
Length = 247
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 23/243 (9%)
Query: 4 SWIFLIVS--YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+++ LI++ + + + + K + F L+ I +LL + S P L+
Sbjct: 18 TFVLLIIAAIIYCVHFKKLAKFLAIISFTWLY--IMSAPFTGLLLTNNDDS---PALTLD 72
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV+LG G + P + S + E +R Y + Q I+ +G
Sbjct: 73 EYKQAQAIVILGGG-----SYPTKELYAETASGAPQLERLR-YAAFLQKETGLPILTTGY 126
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G++E + +L + V +E ++ +T +NA F+ +++ + IILV+
Sbjct: 127 S--LIGISEGDLMAKELNQFFNVPTQ--WIENKARNTEENASFTKNILIKDHIQKIILVT 182
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILI 235
+ +H+KR++ F+ G + + + + S IP + LKE+IG
Sbjct: 183 NQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWK 242
Query: 236 AYY 238
A+Y
Sbjct: 243 AHY 245
>gi|68250305|ref|YP_249417.1| hypothetical protein NTHI2008 [Haemophilus influenzae 86-028NP]
gi|145633636|ref|ZP_01789363.1| hypothetical protein CGSHi3655_00981 [Haemophilus influenzae 3655]
gi|148825756|ref|YP_001290509.1| hypothetical protein CGSHiEE_03525 [Haemophilus influenzae PittEE]
gi|229845236|ref|ZP_04465369.1| hypothetical protein CGSHi6P18H1_02444 [Haemophilus influenzae
6P18H1]
gi|229847322|ref|ZP_04467424.1| hypothetical protein CGSHi7P49H1_00484 [Haemophilus influenzae
7P49H1]
gi|68058504|gb|AAX88757.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
gi|144985513|gb|EDJ92329.1| hypothetical protein CGSHi3655_00981 [Haemophilus influenzae 3655]
gi|148715916|gb|ABQ98126.1| hypothetical protein CGSHiEE_03525 [Haemophilus influenzae PittEE]
gi|229809747|gb|EEP45471.1| hypothetical protein CGSHi7P49H1_00484 [Haemophilus influenzae
7P49H1]
gi|229811831|gb|EEP47527.1| hypothetical protein CGSHi6P18H1_02444 [Haemophilus influenzae
6P18H1]
Length = 247
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 23/243 (9%)
Query: 4 SWIFLIVS--YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+++ LI++ + + + + K + F L+ I +LL + S P L+
Sbjct: 18 TFVLLIIAAIIYCVHFKKLAKFLAIISFTWLY--IMSVPFTGLLLTNNDDS---PALTLD 72
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV+LG G+ + A + Q E +R Y + Q I+ +G
Sbjct: 73 EYKQAQAIVILGGGSYQTKELYAETASGAPQ-----LERLR-YAAFLQKETGLPILTTGY 126
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G++E + +L + V +E ++ +T +NA F+ +++ + IILV+
Sbjct: 127 S--LIGISEGDLMAKELNQFFNVPTQ--WIENKARNTEENASFTKNILVKDHIQKIILVT 182
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILI 235
+ +H+KR++ F+ G + + + + S IP + LKE+IG
Sbjct: 183 NQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWK 242
Query: 236 AYY 238
A+Y
Sbjct: 243 AHY 245
>gi|189500837|ref|YP_001960307.1| hypothetical protein Cphamn1_1910 [Chlorobium phaeobacteroides BS1]
gi|189496278|gb|ACE04826.1| protein of unknown function DUF218 [Chlorobium phaeobacteroides
BS1]
Length = 251
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 44/247 (17%), Positives = 105/247 (42%), Gaps = 20/247 (8%)
Query: 2 LLSWIFLIVSY---WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+L FL + ++ RK + ++L + I L++ ++ R ++
Sbjct: 7 ILPVFFLPIGLGILVLVIGALFRKWIVVWLGIVLLWVLSMPITGDWLMRQIEGVETRVVV 66
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ + G+ +V+LG +P++ R ++ R + ++++ K +I
Sbjct: 67 --ESLEQGDAVVVLGGVLWQVPSV---RYGEWGEAADRFEGGVEVFRAGK----APLLIF 117
Query: 119 SGGD--PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
G E + + + GV + +++ + +T A+ ++ ++ +
Sbjct: 118 MGAKMPWMPDTRPEGEILAERAIRLGVPEEAVRVTERVGNTADEARAVKELLAGIERPEV 177
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY------SIIPLSANFYLTELALKEY 230
ILV+SA+H+ R+ + F++ GI + D+ +YY +P + +E+A+KE
Sbjct: 178 ILVTSAFHMNRASMLFRNAGIEVQPFPVDFRTSYYNELTLIDFLPSADGVENSEIAMKEM 237
Query: 231 IGILIAY 237
+G L
Sbjct: 238 LGTLYYK 244
>gi|257419391|ref|ZP_05596385.1| conserved hypothetical protein [Enterococcus faecalis T11]
gi|257161219|gb|EEU91179.1| conserved hypothetical protein [Enterococcus faecalis T11]
Length = 337
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y KK + I++LG+G P ++ SR+ + + Y + +
Sbjct: 146 YSWMYQMIPLKKAVDYIIVLGSGIRSEEVPPLLK--------SRLDKGIEYY----EKNP 193
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--- 169
++SGG +AE+ LL + + I +E QS T++N FS ++I+
Sbjct: 194 TAKFVVSGGKGPDEPVAEAFAMKKYLLSQNIPAEAILMEGQSTTTYENMLFSKAIIQADW 253
Query: 170 -----NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ + ++I ++ YH+ R +Y G+ + + +A ++L
Sbjct: 254 QKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGAP-----------TALYFLPT 302
Query: 225 LALKEYIGILIAYYR 239
++EYI +L+ R
Sbjct: 303 ALIREYIALLVHDKR 317
>gi|162449133|ref|YP_001611500.1| hypothetical protein sce0863 [Sorangium cellulosum 'So ce 56']
gi|161159715|emb|CAN91020.1| hypothetical protein sce0863 [Sorangium cellulosum 'So ce 56']
Length = 253
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 96/228 (42%), Gaps = 12/228 (5%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS--PQWKKDGNIIV 70
+ I + S ++ L+ + + + L + + + R L + + ++V
Sbjct: 30 FRTRGAKIGRALAWSAWLALW-LLSTPWLSSALARRI-STVPRDLHAELAGSSPERRVLV 87
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+L G S R +R+Y+ +I+SG D +
Sbjct: 88 ILTAGIDADEFGEPAMERQSAAGLERGLAAVRVYREYGFGH----VIVSGKDVRGAPTQL 143
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ + L+E GV R I LET+S DT +NA S+ + + + +++V+SA H+ RS
Sbjct: 144 ASAMADLLVELGVPRKKIILETESRDTRENALHSTRIARGLSADAVVVVTSALHMPRSLR 203
Query: 191 YFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGIL 234
F+ G++ + + + ++P S + ++ A+ E +G+L
Sbjct: 204 MFERAGLDVLPAPVRFQSLPPEGPERLLPESLSLRRSQRAVHELVGLL 251
>gi|42780808|ref|NP_978055.1| hypothetical protein BCE_1734 [Bacillus cereus ATCC 10987]
gi|42736728|gb|AAS40663.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 192
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 80/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+ +PS+ RI + K+ ++ I+SGG +
Sbjct: 39 EADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKAHEKAIA----IVSGGKGK 86
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K ++V++ +H
Sbjct: 87 GEDISEALAMKNELIKLKIAEDRIIMEDKSTSTDENIKFSKPLIPD-NMKKGLIVTNDFH 145
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 146 MFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWF 188
>gi|326204163|ref|ZP_08194023.1| protein of unknown function DUF218 [Clostridium papyrosolvens DSM
2782]
gi|325985674|gb|EGD46510.1| protein of unknown function DUF218 [Clostridium papyrosolvens DSM
2782]
Length = 256
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 88/237 (37%), Gaps = 44/237 (18%)
Query: 10 VSYWHLLCQS---------IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ W L ++ RK+ + + L + + II +++
Sbjct: 45 IILWALFKKTPSYRRRPNLYRKLIKVFTGLFLIWLVSFAIITAVIITS---------AMS 95
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ + +++LG G P+ R+ T+ YK + II+SG
Sbjct: 96 DKEQKVDSVIVLGAGLK--------GETPTLVLKKRLDYTLDYYK----SNPDVKIIVSG 143
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G + E+ L++ + + I E S T++N +S +N GK ++
Sbjct: 144 GQGIGETITEAEAMKRYLVKHDIPENIILKEESSTSTYENMLYSKKAYENTIGKPLDKVM 203
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++++ +H+ R+++ + G+ S + + + L+EY +
Sbjct: 204 IITNDFHMFRAKILAKRAGLKAYGISSG-----------TPWYIYPNVCLREYFALF 249
>gi|52424963|ref|YP_088100.1| hypothetical protein MS0908 [Mannheimia succiniciproducens MBEL55E]
gi|52307015|gb|AAU37515.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 250
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 53/246 (21%), Positives = 97/246 (39%), Gaps = 27/246 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++LS++FL + + + + +S +L+ F +L L L+
Sbjct: 24 LVLSFLFLAFKF-----KKLAALCALSGLTILYVF-SIPYTAQLLNDSL---TTEDNLTV 74
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV+LG G + P E MR Y + I+ISG
Sbjct: 75 EDYRSAQAIVVLGAGLRDSKELYNKITVPGIA-----LERMR-YAAYLHKETELPILISG 128
Query: 121 GDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
P + +E+ + + GV+ LE +S +T QNA ++ M++ K IILV
Sbjct: 129 AGPNGN--SEAKIMGQEFFTFFGVQPK--WLEERSTNTKQNALYTREMLEREGIKRIILV 184
Query: 180 SSAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++ +H++R++L F+ G + Y IP + LKE++G
Sbjct: 185 TNQWHMQRAKLLFEAQGFEVLPASVGSGVTPESYELNAMHFIPQAGAMAANMQLLKEWLG 244
Query: 233 ILIAYY 238
+
Sbjct: 245 FIKEKL 250
>gi|229029391|ref|ZP_04185475.1| hypothetical protein bcere0028_14820 [Bacillus cereus AH1271]
gi|228731922|gb|EEL82820.1| hypothetical protein bcere0028_14820 [Bacillus cereus AH1271]
Length = 194
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ PS+ RI E Y + ++ I+SGG +
Sbjct: 41 DADYIIVLGS--------KVNGTTPSYSLQYRIDEAAE-YLQSHEKTIA---IVSGGKGK 88
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 89 GEDISEALAMKNGLMKQKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 147
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 148 MFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWF 190
>gi|228984797|ref|ZP_04144969.1| hypothetical protein bthur0001_14980 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229155285|ref|ZP_04283396.1| hypothetical protein bcere0010_14780 [Bacillus cereus ATCC 4342]
gi|228628210|gb|EEK84926.1| hypothetical protein bcere0010_14780 [Bacillus cereus ATCC 4342]
gi|228774995|gb|EEM23389.1| hypothetical protein bthur0001_14980 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 194
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 80/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 41 EADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 88
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 89 GEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 147
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 148 MFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWF 190
>gi|170756849|ref|YP_001782427.1| hypothetical protein CLD_1753 [Clostridium botulinum B1 str. Okra]
gi|169122061|gb|ACA45897.1| putative membrane protein [Clostridium botulinum B1 str. Okra]
Length = 351
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 96/239 (40%), Gaps = 24/239 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + W +I + + +FI + I ++ + + +K
Sbjct: 104 LGIFIILWIWFTPNIIRGVTNPILTAIIAFITFLITYFFMMMFIFAISAAINIYMPKRKK 163
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + SRI + + +YK + II +G
Sbjct: 164 YDYIIVLGSGLIGDRVPPLL--------ASRIDKGIEIYKRQLKKGNPSKIIFTGAKGAD 215
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-----MQGKNIILVS 180
++E + + G+ + + +E Q+++T++N S +++ + I+V+
Sbjct: 216 EKISEGLAMWKYAKDKGIPTEHMIIEDQAVNTYENLYNSKKLLEEDYKAREKEYRCIVVT 275
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL RS ++ + G+ + S + ++ ++EYIG++ Y +
Sbjct: 276 NNFHLFRSLIWARIVGLECDGAGS-----------KTKLYFSLNALIREYIGVMYIYKK 323
>gi|331268940|ref|YP_004395432.1| hypothetical protein CbC4_0755 [Clostridium botulinum BKT015925]
gi|329125490|gb|AEB75435.1| conserved protein [Clostridium botulinum BKT015925]
Length = 262
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 45/240 (18%), Positives = 97/240 (40%), Gaps = 33/240 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCF---MLLFSFIGWGIIPTILLKHLQFSYQRPL 57
M+ ++ + V + + I K + ++ FI G+ IL++ L
Sbjct: 41 MIWLFLGVFVIVFQRFKERILKFYKKINIKFRTVIIFFIVIGLSSFILIEGLIIH----S 96
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ + +++LG S R+ T+ K + II
Sbjct: 97 AISKTTDEKKYMIVLGAAVHGD--------YMSLILKKRMDTTLEYLKKY----PNTKII 144
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--- 174
+SGG + E+ L+++G+ D I E +S +T +N ++S ++K + K
Sbjct: 145 VSGGKGPGELITEAEAMKRYLIQNGINHDQIIKEEKSRNTAENFKYSLEILKQREKKDNP 204
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++ +V++ +H+ R++ + GIN A S + + N+Y ++EY ++
Sbjct: 205 SVCVVTTDFHMFRAKFLAKRAGINVHAVPSK------GYLSSAPNYY-----IREYFAVI 253
>gi|228957994|ref|ZP_04119731.1| hypothetical protein bthur0005_15050 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228801701|gb|EEM48581.1| hypothetical protein bthur0005_15050 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 194
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 81/174 (46%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+ ++PS+ RI + KS ++ I+SGG +
Sbjct: 41 EADYIIVLGS--------KVNGMKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 88
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 89 GEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 147
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 148 MFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWF 190
>gi|16273588|ref|NP_439843.1| hypothetical protein HI1701 [Haemophilus influenzae Rd KW20]
gi|260581042|ref|ZP_05848864.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|1176139|sp|P44292|Y1701_HAEIN RecName: Full=Uncharacterized protein HI_1701
gi|1574555|gb|AAC23347.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|260092282|gb|EEW76223.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 247
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 51/241 (21%), Positives = 101/241 (41%), Gaps = 19/241 (7%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+++ LI++ + F++ + +I +LL + S P L+
Sbjct: 18 TFVLLIIAAIIYCVHFKKLAKFIAIISFTWLYIMSAPFTGLLLTNNDDS---PALTLDEY 74
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IV+LG G+ + A + Q E +R Y + Q I+ +G
Sbjct: 75 KQAQAIVILGGGSYQTKELYAETASGAPQ-----LERLR-YAAFLQKETGLPILTTGYS- 127
Query: 124 QKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
G++E + +L + V +E ++ +T +NA F+ +++ + IILV++
Sbjct: 128 -LIGISEGDLMAKELNQFFNVPTQ--WIENKARNTEENASFTKNILIKDHIQKIILVTNQ 184
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILIAY 237
+H+KR++ F+ G + + + + S IP + LKE+IG A+
Sbjct: 185 WHMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAH 244
Query: 238 Y 238
Y
Sbjct: 245 Y 245
>gi|170744388|ref|YP_001773043.1| hypothetical protein M446_6345 [Methylobacterium sp. 4-46]
gi|168198662|gb|ACA20609.1| protein of unknown function DUF218 [Methylobacterium sp. 4-46]
Length = 273
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 84/208 (40%), Gaps = 15/208 (7%)
Query: 40 IIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
+ LL+ L+ + + + +V+LG IR E +R +
Sbjct: 59 PLDQWLLRPLEERFPAAAGLAR----VDGVVVLGGALAE-----GIRAERGAPGLNREAD 109
Query: 100 TMRLYKSCKQHSMHCTIIISGG--DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ + + + ++ +GG ++ GL E+ L E G+ + ++ +S T
Sbjct: 110 RLVAFAALARRYPAAKLVFAGGPASGRREGLTEAQASRALLEEIGLPPGRLLVDDRSRST 169
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT-KASCSDYLNAYYS---I 213
++NA + ++ + G+ +LV+SA H+ R+ F+ G A Y +
Sbjct: 170 WENAVEARALARPGPGETWLLVTSASHMPRAMGAFRRAGWPPLLAWPVAYRTTRRGAAAL 229
Query: 214 IPLSANFYLTELALKEYIGILIAYYRGN 241
PL A +LA E+ G+L RG
Sbjct: 230 RPLGAKLAAIDLAAHEWAGLLAYRLRGR 257
>gi|229043469|ref|ZP_04191179.1| hypothetical protein bcere0027_15170 [Bacillus cereus AH676]
gi|228725847|gb|EEL77094.1| hypothetical protein bcere0027_15170 [Bacillus cereus AH676]
Length = 196
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+ +PS+ RI + KS + I+SGG +
Sbjct: 43 EADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHDKAIA----IVSGGKGK 90
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 91 GEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 149
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 150 MFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWF 192
>gi|229109172|ref|ZP_04238771.1| hypothetical protein bcere0018_14430 [Bacillus cereus Rock1-15]
gi|228674182|gb|EEL29427.1| hypothetical protein bcere0018_14430 [Bacillus cereus Rock1-15]
Length = 196
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+ +PS+ RI + KS + I+SGG +
Sbjct: 43 EADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHDKAIA----IVSGGKGK 90
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 91 GEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 149
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 150 MFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWF 192
>gi|332968000|gb|EGK07087.1| protein of hypothetical function DUF218 [Desmospora sp. 8437]
Length = 190
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 80/208 (38%), Gaps = 24/208 (11%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L+S + +I +L+ R + ++LG PA+R
Sbjct: 5 WLWSGVILCLIFALLIIPFWVQASRYDDVRVADHPRDAALVLGAALWDSQPSPALR---- 60
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R+ + LY + II SGG G++E+ L+E GV D+ L
Sbjct: 61 ----ERLQMALSLYHKGQVQW----IICSGGVG-DDGISEAEGMKRYLMEQGVPPKDLLL 111
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E +S +T +N Q+S ++K +NI LV+ YH+ RS + GI + +
Sbjct: 112 EEESTNTKENLQYSKKLLKPNDIQNIYLVTHDYHMYRSLALARQAGIRAEPAPVH----- 166
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYY 238
S+ + +E + I+
Sbjct: 167 ------SSVLFTPYYKARECLSIIKYRL 188
>gi|145637641|ref|ZP_01793296.1| hypothetical protein CGSHiHH_03118 [Haemophilus influenzae PittHH]
gi|145269164|gb|EDK09112.1| hypothetical protein CGSHiHH_03118 [Haemophilus influenzae PittHH]
Length = 247
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 99/241 (41%), Gaps = 19/241 (7%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+++ LI++ + F+ + +I +LL + P L+
Sbjct: 18 TFVLLIIATILYRVHFKKLAKFIVLISFTWLYIMSAPFTGLLLT---DNDDIPALTLDEY 74
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IV+LG G + P + S + E +R Y + Q I+ +G
Sbjct: 75 KQAQAIVILGGG-----SYPTKELYAETASGAPQLERLR-YAAFLQKETGLPILTTGYS- 127
Query: 124 QKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
G++E + +L + V +E ++ +T +NA F+ +++ + IILV++
Sbjct: 128 -LIGISEGDLMAKELNQFFNVPTQ--WIENKARNTEENASFTKNILIKDHIQKIILVTNQ 184
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILIAY 237
+H+KR++ F+ G + + + + S IP + LKE+IG A+
Sbjct: 185 WHMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWKAH 244
Query: 238 Y 238
Y
Sbjct: 245 Y 245
>gi|148380781|ref|YP_001255322.1| hypothetical protein CBO2822 [Clostridium botulinum A str. ATCC
3502]
gi|153934201|ref|YP_001385066.1| hypothetical protein CLB_2765 [Clostridium botulinum A str. ATCC
19397]
gi|153935183|ref|YP_001388535.1| hypothetical protein CLC_2698 [Clostridium botulinum A str. Hall]
gi|148290265|emb|CAL84385.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502]
gi|152930245|gb|ABS35745.1| putative membrane protein [Clostridium botulinum A str. ATCC 19397]
gi|152931097|gb|ABS36596.1| putative membrane protein [Clostridium botulinum A str. Hall]
Length = 351
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 96/239 (40%), Gaps = 24/239 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + W +I + + +FI + I ++ + + +K
Sbjct: 104 LGIFIILWIWFTPNIIRGVTNPILTAIIAFITFLITYFFMMMFIFAISAAINIYMPKRKK 163
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + SRI + + +YK + II +G
Sbjct: 164 YDYIIVLGSGLIGDRVPPLL--------ASRIDKGIEIYKKQLKKGNPSKIIFTGAKGAD 215
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-----MQGKNIILVS 180
++E + + G+ D + +E ++++T++N S +++ + I+V+
Sbjct: 216 EKISEGLAMWKYAKDKGIPTDHMIIEDKAVNTYENLYNSRKLLEEDYKTREKEYRCIVVT 275
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL RS ++ + G+ + S + ++ ++EYIG++ Y +
Sbjct: 276 NNFHLFRSLIWARIVGLECDGAGS-----------KTKLYFSLNALIREYIGVMYIYKK 323
>gi|294507679|ref|YP_003571737.1| hypothetical protein SRM_01864 [Salinibacter ruber M8]
gi|294344007|emb|CBH24785.1| Conserved hypothetical protein [Salinibacter ruber M8]
Length = 180
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 105 KSCKQHSMHCTIIISGG-DPQKHGLA-ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
++ + +I SGG P K A E+ N L + GV D I LE++S +T++NA
Sbjct: 11 RASTTPARCPLVIASGGTQPWKRPDAREAPATNVLLQDWGVPGDAILLESKSANTYENAT 70
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLS 217
++ ++ ++LV+SA H+ R+ F+ GI + +D ++P +
Sbjct: 71 RTAELLDRRGLNCVLLVTSALHMPRALAVFRSAGIKAVPAPTDVQVGDRNYTVLDVLPDA 130
Query: 218 ANFYLTELALKEYIGILIAYYRG 240
+ A++EY+G L+ +RG
Sbjct: 131 GALAGSTAAIREYVGYLVYDWRG 153
>gi|301170456|emb|CBW30063.1| conserved hypothetical protein [Haemophilus influenzae 10810]
Length = 247
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 52/243 (21%), Positives = 103/243 (42%), Gaps = 23/243 (9%)
Query: 4 SWIFLIVS--YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+++ LI++ + + + + K + F L+ I +LL + P L+
Sbjct: 18 TFVLLIIAAIIYCVHFKKLAKFLAIISFTWLY--IMSAPFTGLLLT---DNDDIPALTLD 72
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV+LG G + P + S + E +R Y + Q I+ +G
Sbjct: 73 EYKQAQAIVILGGG-----SYPTKELYAETASGAPQLERLR-YAAFLQKETGLPILTTGY 126
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G++E + +L + V +E ++ +T +NA F+ +++ + IILV+
Sbjct: 127 S--LIGISEGDLMAKELNQFFNVPTQ--WIENKARNTEENASFTKNILIKDHIQKIILVT 182
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILI 235
+ +H+KR++ F+ G + + + + S IP + LKE+IG
Sbjct: 183 NQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWK 242
Query: 236 AYY 238
A+Y
Sbjct: 243 AHY 245
>gi|241888952|ref|ZP_04776256.1| integral membrane protein [Gemella haemolysans ATCC 10379]
gi|241864201|gb|EER68579.1| integral membrane protein [Gemella haemolysans ATCC 10379]
Length = 345
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 46/237 (19%), Positives = 94/237 (39%), Gaps = 25/237 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ F +V Y+ + + L+S++G ++ + + +
Sbjct: 105 LATFFFLVGYFIYWPRVADYTYGNLILSALYSYVGLVVLYFLCIAMSYLVSSVLNIINIL 164
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + +V+LG G P + SRI + + +YK+ + +I+SGG
Sbjct: 165 PRRIDYVVVLGAGLIGERVTPLL--------ASRIRKGINVYKA----NPGSKLIMSGGQ 212
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ N E GV+ +DI LE +S T +N FS I K+ +V++
Sbjct: 213 GPDEVVSEAFAMKNYAFEQGVDENDIILEDKSTSTEENIIFSKKFIPA--DKSFAVVTNY 270
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YH+ R+ + + G + + ++ ++E+IG L +
Sbjct: 271 YHVYRALVQARTLGFRCIGYGAP-----------TKFYFTLNAFIREFIGYLYFKRK 316
>gi|256830641|ref|YP_003159369.1| hypothetical protein Dbac_2878 [Desulfomicrobium baculatum DSM
4028]
gi|256579817|gb|ACU90953.1| protein of unknown function DUF218 [Desulfomicrobium baculatum DSM
4028]
Length = 260
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 51/240 (21%), Positives = 96/240 (40%), Gaps = 13/240 (5%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ--WK 63
+F + + LL +S I LL + L++ L+ +Y LS K
Sbjct: 26 LFALGLLYVLLRRSKDAIAPFVMGGLLLYAFSLNSVSGYLIRPLENAYPPLNLSNAEIVK 85
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K +V+LG+G +P + R+ E +R+ +++SGG
Sbjct: 86 KPVKWVVVLGSGHWTDQRLPPG-AMLEEAALYRLNEGIRVANRF----PGAILVLSGGKF 140
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ + + V ++ G I L Q+LDT A ++ +LV+SA
Sbjct: 141 KDE-QSNAQVMAAAAVDLGFNPGRIMLSDQALDTHDEAMRIKAL---AGSDLFVLVTSAS 196
Query: 184 HLKRSQLYFQHFGINTKASCSDY--LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
H+ R+ F++ G+ + + Y +P + N +A+ EY+G+ ++ RG
Sbjct: 197 HMLRAVKLFENQGLKPIPAPTCYQSKGEPEYFLPRADNIKTCHMAVHEYLGLAWSFVRGQ 256
>gi|254479072|ref|ZP_05092426.1| conserved hypothetical protein [Carboxydibrachium pacificum DSM
12653]
gi|214034988|gb|EEB75708.1| conserved hypothetical protein [Carboxydibrachium pacificum DSM
12653]
Length = 192
Score = 131 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 29/219 (13%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
F +L+F+ + II + + + F + + K + I++LG
Sbjct: 2 SRFLKLVVVLIFAL--FSIIAILAYQIVSFGFT------EKPKKSDAIIVLGCAVYGD-- 51
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
PS R+ E ++LYK H IIISGG ++E+ LLE
Sbjct: 52 ------TPSPFFKERLEEALKLYKEGYGHY----IIISGGKGPGESISEAEAGKRYLLEK 101
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV +I L+ +S T++N FS +++ K I+VS+ +HLKR+ + + GI+
Sbjct: 102 GVASKNILLDNKSFSTYENLLFSKEIMEKNSLKTAIIVSNKFHLKRASVIAKRIGIDASF 161
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
S + L+E + +L Y RG
Sbjct: 162 SGVFVKEYVGDEVYG---------FLREVLALLYTYLRG 191
>gi|296502298|ref|YP_003663998.1| hypothetical protein BMB171_C1462 [Bacillus thuringiensis BMB171]
gi|296323350|gb|ADH06278.1| putative cytoplasmic protein [Bacillus thuringiensis BMB171]
Length = 192
Score = 131 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+ +PS+ RI + KS + I+SGG +
Sbjct: 39 EADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHDKAIA----IVSGGKGK 86
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 87 GEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 145
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ + G+ + + IIP + ++EY+ I ++
Sbjct: 146 MFRAKKIAEKQGLQLEGLPAK--TPKPIIIPSN---------VREYLAITQYWF 188
>gi|254360560|ref|ZP_04976709.1| hypothetical protein MHA_0110 [Mannheimia haemolytica PHL213]
gi|261492312|ref|ZP_05988874.1| hypothetical protein COK_0742 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496099|ref|ZP_05992507.1| hypothetical protein COI_1840 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|153091100|gb|EDN73105.1| hypothetical protein MHA_0110 [Mannheimia haemolytica PHL213]
gi|261308201|gb|EEY09496.1| hypothetical protein COI_1840 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311995|gb|EEY13136.1| hypothetical protein COK_0742 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 247
Score = 131 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 87/233 (37%), Gaps = 23/233 (9%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L FF +L+ L L + + + K+ IV+LG
Sbjct: 29 FSLGYKYAAYFFALLGILILYIFSIPYTSQKLGDSLVEAEP---FTIEKYKNAQAIVVLG 85
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + E MR Y + I+ +G P +G +E+ V
Sbjct: 86 GGLRDSQELFGKLAITGIP-----LERMR-YAAYLHKETGLPILATGSSP--NGTSEAKV 137
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
++ + + LE ++ T +NA FS +++ IILV++ +H+KR+++ F
Sbjct: 138 MADEF-KMFFNIETKWLENKAKTTKENAIFSREILEKENIHKIILVTNQWHMKRAEMLFS 196
Query: 194 HFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
G ++ Y + IP + LALKE+IG Y++
Sbjct: 197 QQGFEVMSASVGSGDTPDHYKLNFMHFIPQAGAMNSNMLALKEWIG----YWK 245
>gi|328883409|emb|CCA56648.1| hypothetical protein SVEN_3362 [Streptomyces venezuelae ATCC 10712]
Length = 340
Score = 131 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 101/243 (41%), Gaps = 26/243 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL+ + ++V + + + + ++ + + G + + L + +++ L +
Sbjct: 99 LLAGLGMVVVMGLAVAAVLTRSPVLGT-IVGTTLLVLGYVSFLFLCFVGYAFLYGRL--R 155
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS----MHCTII 117
++D +V+LG+G I R+ P S R+ +Y+ +I
Sbjct: 156 LRRDAAYVVVLGSGL-----IGGRRVSPLLAS--RLDRGREVYEKLAARKRRDGTAPLLI 208
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNI 176
SGG L ES + L+ G D + E +S T +N FS ++ ++ G
Sbjct: 209 TSGGQGPDETLPESHAMADYLVARGFPPDALVREDRSRTTEENLLFSKELMERDRPGSAC 268
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++V++ +H R+ + + G++ + S +A ++ ++E++ + +
Sbjct: 269 VIVTNNFHAFRAAILARRAGVDGQVVGSP-----------TAAYFWPSATMREFVAVFLQ 317
Query: 237 YYR 239
Y R
Sbjct: 318 YKR 320
>gi|152978996|ref|YP_001344625.1| hypothetical protein Asuc_1330 [Actinobacillus succinogenes 130Z]
gi|150840719|gb|ABR74690.1| protein of unknown function DUF218 [Actinobacillus succinogenes
130Z]
Length = 274
Score = 131 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 92/230 (40%), Gaps = 24/230 (10%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + F + F + ++ L + R L+ + ++ IV+LG G
Sbjct: 58 RFKKLAFLTALFGAVVLYVSSIPYTAERLNNSLTQEDR--LTVEDYRNAQAIVILGGGLR 115
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ P + E MR Y + I+ISG P + +E+ V +
Sbjct: 116 DSKELFNTITVPGL-----VLERMR-YAAYLHKETELPILISGASPNGN--SEAKVMGQE 167
Query: 138 LL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
G++ LE +S +T QNA +S +++ K I+L+++ +H++R+++ F+ G
Sbjct: 168 FFTFFGIQPK--WLEERSTNTKQNALYSKEILERENIKRIVLITNQWHMQRAKMLFEKQG 225
Query: 197 INTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ Y + IP + LKE+IG Y++
Sbjct: 226 FEVLPASVGPGIVPVSYEHNAMHFIPQAGALNANMQLLKEWIG----YWK 271
>gi|81429248|ref|YP_396249.1| hypothetical protein LSA1636 [Lactobacillus sakei subsp. sakei 23K]
gi|78610891|emb|CAI55943.1| Hypothetical protein LCA_1636 [Lactobacillus sakei subsp. sakei
23K]
Length = 277
Score = 131 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 47/240 (19%), Positives = 92/240 (38%), Gaps = 28/240 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L +F + +LL F+ +F L + + + RP
Sbjct: 38 LIALFFVPMLANLLHVPEDLRIFIGTISTVFLLYIPLFFYLYLSSLIIYLFNRP------ 91
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGG 121
+ + + I++LG+G +P + SRI M Y + K+ ++ SGG
Sbjct: 92 RYNQDYIIVLGSGLIDGQYVPPL-------LASRIERAMTFYHRQVKKGRPAPKLVFSGG 144
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK---NMQGKNIIL 178
L ES+ ++ G+ + E +S++T QN QFS +I+ + II
Sbjct: 145 QGGDEKLPESVAMQRYAIDHGIPVEQTLTEEKSVNTLQNMQFSKQIIEADTDKDKPRIIF 204
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ YH R+ L+ + + + ++ ++L ++E+I IL
Sbjct: 205 STNNYHTFRAGLFAKQAHLKADGIGA-----------KTSKYFLPNATIREFIAILSMKR 253
>gi|319776039|ref|YP_004138527.1| hypothetical protein HICON_13870 [Haemophilus influenzae F3047]
gi|319896847|ref|YP_004135042.1| hypothetical protein HIBPF05050 [Haemophilus influenzae F3031]
gi|329123197|ref|ZP_08251766.1| hypothetical protein HMPREF9095_0984 [Haemophilus aegyptius ATCC
11116]
gi|317432351|emb|CBY80706.1| conserved hypothetical protein [Haemophilus influenzae F3031]
gi|317450630|emb|CBY86850.1| conserved hypothetical protein [Haemophilus influenzae F3047]
gi|327471542|gb|EGF16986.1| hypothetical protein HMPREF9095_0984 [Haemophilus aegyptius ATCC
11116]
Length = 247
Score = 131 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 53/243 (21%), Positives = 106/243 (43%), Gaps = 23/243 (9%)
Query: 4 SWIFLIVS--YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+++ LI++ + + + + K + F L+ I +LL + P L+
Sbjct: 18 TFVLLIIAAIIYCVHFKKLAKFIALISFTWLY--IMSAPFTGLLLT---DNDDIPALTLD 72
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV+LG G + P + S + E +R Y + Q I+ +G
Sbjct: 73 EYKQAQAIVILGGG-----SYPTKELYAETASGAPQLERLR-YAAFLQKETGLPILTTGY 126
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G++E + +L + V +E ++ +T +NA F+ +++ + IILV+
Sbjct: 127 S--LIGISEGDLMAKELNQFFNVPTQ--WIENKARNTEENASFTKNILIKDHIQKIILVT 182
Query: 181 SAYHLKRSQLYFQHFGINTKA-SCSDYLN----AYYSIIPLSANFYLTELALKEYIGILI 235
+ +H+KR++ F+ G + + ++Y + + S IP + LKE+IG
Sbjct: 183 NQWHMKRAKYLFEKQGFDVLPAAAANYGSKGNLSAKSFIPDLGALNSNMVLLKEWIGYWK 242
Query: 236 AYY 238
A+Y
Sbjct: 243 AHY 245
>gi|145635442|ref|ZP_01791143.1| hypothetical protein CGSHiAA_03441 [Haemophilus influenzae PittAA]
gi|145267316|gb|EDK07319.1| hypothetical protein CGSHiAA_03441 [Haemophilus influenzae PittAA]
Length = 247
Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats.
Identities = 51/243 (20%), Positives = 103/243 (42%), Gaps = 23/243 (9%)
Query: 4 SWIFLIVS--YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+++ LI++ + + + + K + F L+ I +LL + P L+
Sbjct: 18 TFVLLIIAAIIYCVHFKKLAKFLAIISFTWLY--IMSAPFTGLLLT---DNDDIPALTLD 72
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV+LG G + P + S + E +R Y + Q I+ +G
Sbjct: 73 EYKQAQAIVILGGG-----SYPTKELYAETASGAPQLERLR-YAAFLQKETGLPILTTGY 126
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G++E + +L + V +E ++ +T +NA F+ +++ + IILV+
Sbjct: 127 S--LIGISEGDLMAKELNQFFNVPTQ--WIENKARNTEENASFTKNILIKDHIQKIILVT 182
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGILI 235
+ +H+KR++ F+ G + + + + S +P + LKE+IG
Sbjct: 183 NQWHMKRAKYLFEKQGFDVLPAAAASYGSKGNLSAKSFVPDLGALNSNMVLLKEWIGYWK 242
Query: 236 AYY 238
A+Y
Sbjct: 243 AHY 245
>gi|168184465|ref|ZP_02619129.1| putative membrane protein [Clostridium botulinum Bf]
gi|237796257|ref|YP_002863809.1| hypothetical protein CLJ_B3049 [Clostridium botulinum Ba4 str. 657]
gi|182672403|gb|EDT84364.1| putative membrane protein [Clostridium botulinum Bf]
gi|229263461|gb|ACQ54494.1| putative membrane protein [Clostridium botulinum Ba4 str. 657]
Length = 351
Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats.
Identities = 37/239 (15%), Positives = 94/239 (39%), Gaps = 24/239 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + W +I + + +F + I ++ + + +K
Sbjct: 104 LGIFIILWIWFTPNIIRGVTNPILTAIIAFTTFLITYFFMMMFIFAISAAINIYMPKRKK 163
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + SRI + + +YK + II +G
Sbjct: 164 YDYIIVLGSGLIGDRVPPLL--------ASRIDKGIEIYKRQLKKGNPSKIIFTGAKGAD 215
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-----QGKNIILVS 180
++E + + + D + +E ++++T++N S +++ + I+V+
Sbjct: 216 EKISEGLAMWKYAKDKDIPTDHMIIEDKAVNTYENLYNSKKLLEEDYKARGKEYRCIIVT 275
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL RS ++ + G+ + S + ++ ++EYIG++ Y +
Sbjct: 276 NNFHLFRSLIWARIVGLECDGAGS-----------KTKLYFSLNALIREYIGVMYIYKK 323
>gi|170017164|ref|YP_001728083.1| integral membrane protein [Leuconostoc citreum KM20]
gi|169804021|gb|ACA82639.1| Integral membrane protein [Leuconostoc citreum KM20]
Length = 353
Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 99/242 (40%), Gaps = 24/242 (9%)
Query: 2 LLSWIFLIVSYWHL-LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
L+ I LI+ L + F+ S+ + +L L + ++ P
Sbjct: 113 LVIGILLIMMPVLFNLLNHYLPNNKIVTFIENVSYSCQNYLVFWVLAFLASYFLTKIVKP 172
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIIS 119
++ K+ ++LG+G T+ S SRI + K + +I+S
Sbjct: 173 KYNKE--YAIVLGSGLINGDTV-------SPLLGSRILVAAKFKAKQLAKSKKKMILIMS 223
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NII 177
GG L ES+ +++GV DI ++ QS +T+QN FS +I + I
Sbjct: 224 GGQGSDEKLPESVAMKAYAIKNGVPESDILVDDQSKNTYQNMLFSKQVIIDNGLDLQKGI 283
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ YH+ R+ + + G+N S ++ ++L ++EYI IL+ +
Sbjct: 284 FTTNDYHVFRAAGFARLVGLNIDGIGS-----------KTSKYFLPNALIREYIAILVKH 332
Query: 238 YR 239
+
Sbjct: 333 KK 334
>gi|168179230|ref|ZP_02613894.1| putative membrane protein [Clostridium botulinum NCTC 2916]
gi|226950231|ref|YP_002805322.1| hypothetical protein CLM_3185 [Clostridium botulinum A2 str. Kyoto]
gi|182669494|gb|EDT81470.1| putative membrane protein [Clostridium botulinum NCTC 2916]
gi|226844033|gb|ACO86699.1| putative membrane protein [Clostridium botulinum A2 str. Kyoto]
Length = 351
Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 37/239 (15%), Positives = 94/239 (39%), Gaps = 24/239 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + W +I + + +F + I ++ + + +K
Sbjct: 104 LGIFIILWIWFTPNIIRGVTNPILTAIIAFTTFLITYFFMMMFIFAISAAINIYMPKRKK 163
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + SRI + + +YK + II +G
Sbjct: 164 YDYIIVLGSGLIGDRVPPLL--------ASRIDKGIEIYKRQLKKGNPSKIIFTGAKGAD 215
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-----QGKNIILVS 180
++E + + + D + +E ++++T++N S +++ + I+V+
Sbjct: 216 EKISEGLAMWKYAKDKDIPTDHMIIEDKAVNTYENLYNSKKLLEEDYKARGKEYRCIIVT 275
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL RS ++ + G+ + S + ++ ++EYIG++ Y +
Sbjct: 276 NNFHLFRSLIWARIVGLECDGAGS-----------KTKLYFSLNALIREYIGVMYIYKK 323
>gi|331700708|ref|YP_004397667.1| hypothetical protein Lbuc_0328 [Lactobacillus buchneri NRRL
B-30929]
gi|329128051|gb|AEB72604.1| protein of unknown function DUF218 [Lactobacillus buchneri NRRL
B-30929]
Length = 355
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 88/221 (39%), Gaps = 32/221 (14%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
F++ + W I +++L L F +KD + I++LG+G
Sbjct: 136 FLTLLIGYVLLTVWNTISSMILYRLYFP----------RKDKDYIIVLGSGLID------ 179
Query: 85 IRIEPSFQSYSRIFETMRLYKSC-KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ +RI + Y+S K H +I SGG L E LE G+
Sbjct: 180 -GYKVGRLLGNRIETALSFYRSEIKATGKHPKLIFSGGQGGDELLPEGEAMQKYALEHGI 238
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFGINTK 200
+ D +E +S++T QN FS +I+ G+ +I VS+ YH+ R+ + +
Sbjct: 239 PKVDTLVEDKSINTEQNLAFSRKIIEKDSGRDDNKVIFVSNNYHILRAGVLARKLKFAAF 298
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + ++L ++E++ L+ R N
Sbjct: 299 GVGAP-----------TPFYFLPNAVIREHLAFLVMNKRAN 328
>gi|313638523|gb|EFS03686.1| integral membrane protein [Listeria seeligeri FSL S4-171]
Length = 344
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 43/230 (18%), Positives = 99/230 (43%), Gaps = 26/230 (11%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ +++ + + + + F++ + + LL + Y P + + + +++
Sbjct: 115 FGNIIQANNQVLGIVIVFIVTLVGYFSFLFLSFLLSTFIYQYNFP------RNNQDFLIV 168
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGGDPQKHGLAE 130
LG+G +P + SR+ + Y K + T I+SGG ++E
Sbjct: 169 LGSGLIGGDRVPPL-------LASRLDRAIAFYEKQLAKKGKRATFIVSGGKGDNETISE 221
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQ 189
+ L+ G+E I +E +S++T QN QFS + + + N + ++ +HL R+
Sbjct: 222 AEAMRGYLISKGIEETFIIMENKSVNTLQNMQFSKKKMDAIMPEYNSLFSTNNFHLFRAS 281
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
LY + G+ ++ + +A +Y+ ++E+I + Y +
Sbjct: 282 LYARKAGLKSQGIGA-----------KTALYYMPNALIREFIATIFMYKK 320
>gi|187933235|ref|YP_001885962.1| hypothetical protein CLL_A1769 [Clostridium botulinum B str. Eklund
17B]
gi|187721388|gb|ACD22609.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund
17B]
Length = 253
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 27/207 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFM----LLFSFIGWGIIPTILLKHLQFSYQRP 56
+ + + +I+ +H + Q +FF CF+ ++ FI GI+ I ++ + S +
Sbjct: 32 LPIFILGIILVLYHFIKQK---LFFNRCFIKINKIIKFFICIGIVLFIAVEIVIISCPK- 87
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
K++ + IV+LG G + S+ SR+ ++ +S I
Sbjct: 88 ----SNKENTDYIVVLGAGLNNGD-------QLSYILKSRLDSALQCINEFNNNSY---I 133
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN- 175
++SGG ++E++ LLE G+ D+I +E +S +TF+N ++S +I+ KN
Sbjct: 134 VVSGGKGNDERISEAMAMKKYLLEQGISEDEILMEDKSKNTFENFKYSKKIIEEHSNKNI 193
Query: 176 ----IILVSSAYHLKRSQLYFQHFGIN 198
+ +V++ +H RS++ + G N
Sbjct: 194 DDLSVKIVTTDFHGFRSKMLAKRNGYN 220
>gi|329935832|ref|ZP_08285635.1| hypothetical protein SGM_1127 [Streptomyces griseoaurantiacus M045]
gi|329304675|gb|EGG48550.1| hypothetical protein SGM_1127 [Streptomyces griseoaurantiacus M045]
Length = 336
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 89/220 (40%), Gaps = 26/220 (11%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ + M L +I + + ++ Y + ++ + +V+LG+G T+
Sbjct: 122 VVVAATAMALAGYIAFLFLCFLV-------YGAMYGRLRIRRRADYVVVLGSGLIGGTTV 174
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
P + R+ + + + ++ SGG + ES + L+ G
Sbjct: 175 PPL-------LAGRLDRARKEHARLSRKGRRPVMLTSGGQGPDEKVPESHAMADYLVAQG 227
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKA 201
D I+ E +S T +N FS ++++ ++V++ YH+ R+ + + G+
Sbjct: 228 FPADLIEREDRSTTTDENLTFSKALMERANPDYRCVIVTNNYHVFRAAVTARRTGVRGHV 287
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ +A ++ ++E++ +L+AY R N
Sbjct: 288 IGAP-----------TAAYFWPSAMIREFVALLVAYRRTN 316
>gi|170761647|ref|YP_001788140.1| hypothetical protein CLK_2209 [Clostridium botulinum A3 str. Loch
Maree]
gi|169408636|gb|ACA57047.1| putative membrane protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 351
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 38/239 (15%), Positives = 95/239 (39%), Gaps = 24/239 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + W +I + + +FI + I ++ + + +K
Sbjct: 104 LGIFIILWIWFTPNIIRGVTNPILAAIIAFITFLITYFFMMMFIFAISAAINIYIPKRKK 163
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + RI + + +YK + II +G
Sbjct: 164 YDYIIILGSGLIGDRVPPLL--------AGRIDKGIEIYKKQLKKGNPSKIIFTGAKGAD 215
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-----MQGKNIILVS 180
++E + + G+ D + +E ++++T++N S +++ + I+V+
Sbjct: 216 EKISEGLAMWKYAKDKGIPTDHMIIEDKAVNTYENLYNSRKLLEEDYKAREKEYRCIVVT 275
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL RS ++ + G+ + S + ++ ++EYIG++ Y +
Sbjct: 276 NNFHLFRSLIWARIVGLECDGAGS-----------KTKLYFSLNALIREYIGVMYIYKK 323
>gi|229144329|ref|ZP_04272735.1| hypothetical protein bcere0012_14900 [Bacillus cereus BDRD-ST24]
gi|228639116|gb|EEK95540.1| hypothetical protein bcere0012_14900 [Bacillus cereus BDRD-ST24]
Length = 194
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 41 EADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 88
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 89 GEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 147
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 148 MFRAKKIAAKQGLQLEGLPAK--TPKPIIIPSN---------VREYLAITQYWF 190
>gi|300855460|ref|YP_003780444.1| hypothetical protein CLJU_c22840 [Clostridium ljungdahlii DSM
13528]
gi|300435575|gb|ADK15342.1| conserved membrane spanning protein [Clostridium ljungdahlii DSM
13528]
Length = 260
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 74/175 (42%), Gaps = 26/175 (14%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K + I +LG G + + R E ++ K + +I SGG
Sbjct: 102 NKKPDYITILGGGISGRNML--------LVQLQRTQEALKYIKQ----NPGIKVIASGGQ 149
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILV 179
+ ++E+ L++ GV+ +DI E +S +T +N +++ ++K + G+ + +V
Sbjct: 150 GRGEDISEAEAMRIYLVQHGVKNEDIIKEEKSKNTLENMKYTREILKKIDGRENIQLAVV 209
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+S +H+ R++ + +G + + L ++EY G++
Sbjct: 210 TSNFHVFRAKFLAKRYGFQVEGVPAPV-----------NYLLLPNYCVREYFGVV 253
>gi|300117365|ref|ZP_07055155.1| hypothetical protein BCSJ1_00510 [Bacillus cereus SJ1]
gi|298725200|gb|EFI65852.1| hypothetical protein BCSJ1_00510 [Bacillus cereus SJ1]
Length = 192
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 39 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 86
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 87 GEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 145
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + +IP + ++EY+ I ++
Sbjct: 146 MFRAKKIAAKQGLQLEGLSA--ATPKRIVIPSN---------IREYLAITQYWF 188
>gi|289434272|ref|YP_003464144.1| hypothetical protein lse_0905 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170516|emb|CBH27056.1| membrane protein, putative [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 344
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 99/230 (43%), Gaps = 25/230 (10%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
++ + Q+ ++ + + + + +G+ + F YQ + + + +++
Sbjct: 114 WFGNIIQANNQVLGIVI-VFVVTLVGYFSFLFLSFLLSTFIYQYNF----PRYNQDFLIV 168
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGGDPQKHGLAE 130
LG+G +P + SR+ + Y K + T I+SGG ++E
Sbjct: 169 LGSGLIGGDRVPPL-------LASRLDRAIAFYEKQLAKKGKRATFIVSGGQGDNETISE 221
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQ 189
+ L+ G++ I +E +S++T QN QFS + + + N + ++ +HL R+
Sbjct: 222 AEAMRGYLISKGIDETFIIMENKSVNTLQNMQFSKKKMDAIMPEYNSLFSTNNFHLFRAS 281
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
LY + G+ ++ + +A +Y+ ++E+I + Y +
Sbjct: 282 LYARKAGLKSQGIGA-----------KTALYYMPNALIREFIATIFMYKK 320
>gi|33865854|ref|NP_897413.1| hypothetical protein SYNW1320 [Synechococcus sp. WH 8102]
gi|33633024|emb|CAE07835.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 250
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 46/229 (20%), Positives = 90/229 (39%), Gaps = 22/229 (9%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ + + M L G++ +L + ++ YQR S + + IV+L G
Sbjct: 30 RRHWPVVAAMSLLWIFSTGVVSQLLWRWVEHPYQR--RSVERAPLADAIVVLSGGRH--- 84
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG--LAESIVYNNKL 138
P + R + L++S + ++ + G H E +Y +
Sbjct: 85 PAPGPAQISEWHDPDRFLAGVALFQSGR----ASRLLFTRGQNPFHPGLPPEGELYRAEA 140
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
++ GV I L + +T Q A ++ Q ++LV+SA+H++R+Q+ F+ G+
Sbjct: 141 VDLGVPATSIGLTDRVTNTAQEANAIRRLLPQDQP-RVLLVTSAFHMRRAQVLFERQGLT 199
Query: 199 TKASCSDY----------LNAYYSIIPLSANFYLTELALKEYIGILIAY 237
D+ +P S + + AL+E +G L
Sbjct: 200 VLPYPVDFQARAAWAGFIWRDPLQWLPNSRSLDDSSRALRELMGRLAYR 248
>gi|119775365|ref|YP_928105.1| hypothetical protein Sama_2230 [Shewanella amazonensis SB2B]
gi|119767865|gb|ABM00436.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 245
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 46/229 (20%), Positives = 89/229 (38%), Gaps = 16/229 (6%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
R + +S L+F +G +++ L+ Y +P+ ++ +L
Sbjct: 28 IWRRRALARSLLMLSIAALVFLSSTFG--SNLIISPLEQRYS---ANPRPILGDCVVSVL 82
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G+ + + S + +R+ E + CT+I+SG + A +
Sbjct: 83 GSEH-DDAIFGSAVQQLSPVALARLTEGL----KQMSLGQDCTLIVSGYRSDYNRFAHAD 137
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII-LVSSAYHLKRSQLY 191
V +E GV I + DT + A+ ++ + + LV+SA H+ R+
Sbjct: 138 VMKQAAMELGVPEAQIIALPLARDTLEEARQIKAL----GLQGALRLVTSAAHMPRAMAM 193
Query: 192 FQHFGINTKASCSDYLNAYYSIIPL-SANFYLTELALKEYIGILIAYYR 239
F H GI A+ +D+ + L + + A+ EY+G L R
Sbjct: 194 FAHEGITADAAPTDFTARQSTWWRLNADALNSAQKAIHEYVGTLWFELR 242
>gi|295705080|ref|YP_003598155.1| hypothetical protein BMD_2965 [Bacillus megaterium DSM 319]
gi|294802739|gb|ADF39805.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 187
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 86/208 (41%), Gaps = 28/208 (13%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
++++FIG ++ ++ Y ++ + +++LG+ + ++ PS
Sbjct: 5 MIYTFIGSLVLYIAIISF----YMYQTAHKPVPQNADYVLVLGS------KVDGDQMSPS 54
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
+ E ++ S Q +I++GG ++E+ L + G++++ I
Sbjct: 55 ------LKERVKTALSYLQAHQQTKVIVTGGKGSDEEISEAEAAYRFLRKEGIKKNRIIK 108
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E QS TF+N F+ + K ++LVS+ +HL R+ + + G + +
Sbjct: 109 ENQSTSTFENFTFTKQKVDIQH-KKVVLVSNDFHLFRASIIAKRQGFDVYPLGAK----- 162
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYY 238
P S + +EY IL +
Sbjct: 163 ---TPNSIKL---QAYFREYAAILKTWL 184
>gi|217959196|ref|YP_002337744.1| hypothetical protein BCAH187_A1788 [Bacillus cereus AH187]
gi|229138411|ref|ZP_04267001.1| hypothetical protein bcere0013_15290 [Bacillus cereus BDRD-ST26]
gi|217065300|gb|ACJ79550.1| conserved hypothetical protein [Bacillus cereus AH187]
gi|228645043|gb|EEL01285.1| hypothetical protein bcere0013_15290 [Bacillus cereus BDRD-ST26]
Length = 159
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+ +PS+ RI + K+ ++ I+SGG +
Sbjct: 6 EADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKAHEKAIA----IVSGGKGK 53
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 54 GEDISEALAMKNGLMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 112
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 113 MFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWF 155
>gi|30019764|ref|NP_831395.1| putative cytoplasmic protein [Bacillus cereus ATCC 14579]
gi|229127043|ref|ZP_04256042.1| hypothetical protein bcere0015_14980 [Bacillus cereus BDRD-Cer4]
gi|29895309|gb|AAP08596.1| hypothetical Cytosolic Protein [Bacillus cereus ATCC 14579]
gi|228656396|gb|EEL12235.1| hypothetical protein bcere0015_14980 [Bacillus cereus BDRD-Cer4]
Length = 194
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+ +PS+ RI + KS + I+SGG +
Sbjct: 41 EADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHDKAIA----IVSGGKGK 88
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 89 GEDISEALAMKNELMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 147
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 148 MFRAKKIAAKQGLQLEGLPAK--TPKPIIIPSN---------VREYLAITQYWF 190
>gi|322807132|emb|CBZ04706.1| hypothetical protein H04402_02902 [Clostridium botulinum H04402
065]
Length = 351
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 38/239 (15%), Positives = 95/239 (39%), Gaps = 24/239 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ + + W +I + + +FI + I ++ + + +K
Sbjct: 104 LGIFIILWIWFTPNIIRGVTNPILTAIIAFITFLITYFFMMMFIFAISAAINIYMPKRKK 163
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++LG+G P + SRI + + +YK + II +G
Sbjct: 164 YDYIIVLGSGLIGDRVPPLL--------ASRIDKGIEIYKRQLKKGNPSKIIFTGAKGAD 215
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-----MQGKNIILVS 180
++E + + G+ + + +E Q+++T++N S +++ + +V+
Sbjct: 216 EKISEGLAMWKYAKDKGIPTEHMIIEDQAVNTYENLYNSKKLLEEDYKAREKEYRCTVVT 275
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HL RS ++ + G+ + S + ++ ++EYIG++ Y +
Sbjct: 276 NNFHLFRSLIWARIVGLECDGAGS-----------KTKLYFSLNALIREYIGVMYIYKK 323
>gi|227893937|ref|ZP_04011742.1| membrane protein [Lactobacillus ultunensis DSM 16047]
gi|227864241|gb|EEJ71662.1| membrane protein [Lactobacillus ultunensis DSM 16047]
Length = 350
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 85/213 (39%), Gaps = 42/213 (19%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I ++ M++F+ W + ++HL + +V+LG G
Sbjct: 155 ILYLITIMMMFTLTSWINLVNWHVQHL-----------------DYVVVLGAGIMGKTVT 197
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
P + SRI + +Y + +I+SGG + E+ + +G
Sbjct: 198 PLL--------ASRISRGIEIYH----KNPGSKLIMSGGQGPGEDIPEAEAMAEYAMNAG 245
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V + DI +E +S T +N +FS +++K +V+S+YH+ R+ + + G+
Sbjct: 246 VPKADIIIENKSRTTNENLRFSHALMK--PDSKFCIVTSSYHVYRALVLAKRQGLKCIGY 303
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ + ++ ++E+I L+
Sbjct: 304 GA-----------KTKWYFTLNAFVREFIAYLV 325
>gi|222095337|ref|YP_002529397.1| hypothetical protein BCQ_1677 [Bacillus cereus Q1]
gi|221239395|gb|ACM12105.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 172
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+ +PS+ RI + K+ ++ I+SGG +
Sbjct: 19 EADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKAHEKAIA----IVSGGKGK 66
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 67 GEDISEALAMKNGLMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 125
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 126 MFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWF 168
>gi|296272332|ref|YP_003654963.1| hypothetical protein Arnit_0792 [Arcobacter nitrofigilis DSM 7299]
gi|296096506|gb|ADG92456.1| protein of unknown function DUF218 [Arcobacter nitrofigilis DSM
7299]
Length = 235
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 40/229 (17%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
++ +F F+ L I + L+ L+ Y+ K + I+LLG
Sbjct: 36 KKAKVSLFLGLAFIFL---ISNSVFSNFLISPLENQYKNQKNIDISKVE--YILLLGG-- 88
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
SR +E ++L K II SG +K +++++ N
Sbjct: 89 ---------------DFESRAYEVIKLSLKLKDT----KIITSGYAGKKL-ISDALYAKN 128
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+L+ G+ + I ++ + DT + A +I N K ILV+SAYH+ R+ F+ G
Sbjct: 129 ELISLGINENRIIMQDKPKDTIEEAISIKKLINN---KPFILVTSAYHMPRAMKIFKMQG 185
Query: 197 INTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+N A ++++ N+Y SI + +A+ EYIG+ +
Sbjct: 186 LNPIAMPTNFMAKKQKSNSYLSI----KDLKKVSIAIHEYIGLAWLKIK 230
>gi|254555567|ref|YP_003061984.1| integral membrane protein [Lactobacillus plantarum JDM1]
gi|254044494|gb|ACT61287.1| integral membrane protein [Lactobacillus plantarum JDM1]
Length = 340
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 49/242 (20%), Positives = 102/242 (42%), Gaps = 29/242 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIF-FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ I LI+S +L R+++ F+ +LL ++ + +L
Sbjct: 106 VLVIMLILSVINLGVWHSRRLWQFLGLALLLTAYFAFSFFAYLL--------ACVTTRLG 157
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIIISG 120
+ + +++LG G +P+ R+ + Y++ + TI++SG
Sbjct: 158 RHRQIDYMIVLGAGL-------MPNGQPTRTLAYRLQAAAKYYRAQRARYHQPITIVVSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNIILV 179
G +AES L++ GV RD I+ E QS T +N +FS + +++ ++V
Sbjct: 211 GQGPDEVMAESTAMRQYLVDQGVPRDAIQEENQSTSTIENLKFSHALIVRQQPFYRAVIV 270
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+S YH+ R+ ++ + +N + + +YL +EY+ +++ Y
Sbjct: 271 TSGYHVLRANIFARQLHLNLTGIGAH-----------TPLYYLPFAMFREYLALIVMYRW 319
Query: 240 GN 241
N
Sbjct: 320 AN 321
>gi|58338206|ref|YP_194791.1| hypothetical protein LBA1967 [Lactobacillus acidophilus NCFM]
gi|227902607|ref|ZP_04020412.1| membrane protein [Lactobacillus acidophilus ATCC 4796]
gi|58255523|gb|AAV43760.1| putative membrane protein [Lactobacillus acidophilus NCFM]
gi|227869696|gb|EEJ77117.1| membrane protein [Lactobacillus acidophilus ATCC 4796]
Length = 350
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 29/230 (12%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
I L++ + +L +S +F F+ LF + I I++ + S+ + K
Sbjct: 118 IILLIFAYPVLGRSTSAPWFR--FIYLFLSMSIFYIIFIMVMYTLTSWLNLINI--NTKK 173
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
N IV+LG G P + SRI + +Y + +I+SGG
Sbjct: 174 LNYIVVLGAGLLGKKVTPLL--------ASRINRGIEIYH----KNPDSKLIMSGGQGPD 221
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ ES E GV + DI +E +S T QN +FS ++K +V+++YH+
Sbjct: 222 EEIPESHAMAAYAEEHGVPKSDIIIEDRSKTTNQNLKFSHQLMKPN--STFCIVTNSYHV 279
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
R+ + + G+ + + ++ ++E+I L+
Sbjct: 280 YRALVLAKRQGLQCIGYGA-----------KTKWYFTLNAFIREFIAYLV 318
>gi|196045100|ref|ZP_03112333.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|225863573|ref|YP_002748951.1| hypothetical protein BCA_1675 [Bacillus cereus 03BB102]
gi|196024102|gb|EDX62776.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|225789948|gb|ACO30165.1| conserved hypothetical protein [Bacillus cereus 03BB102]
Length = 178
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 25 EADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 72
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 73 GEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 131
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + ++ +IP + ++EY I ++
Sbjct: 132 MFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYFAITQYWF 174
>gi|229172359|ref|ZP_04299918.1| hypothetical protein bcere0006_14700 [Bacillus cereus MM3]
gi|228610830|gb|EEK68093.1| hypothetical protein bcere0006_14700 [Bacillus cereus MM3]
Length = 194
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + Y + ++ I+SGG +
Sbjct: 41 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAE-YLQSHEKTIA---IVSGGKGK 88
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N L++ + D I +E +S T +N FS +I + K +I V++ +H
Sbjct: 89 GEDISEALAMKNGLMKLKIAEDRIIMEDKSTSTDENITFSKPLIPDNMKKGMI-VTNDFH 147
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 148 MFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWF 190
>gi|229183906|ref|ZP_04311122.1| hypothetical protein bcere0004_14730 [Bacillus cereus BGSC 6E1]
gi|228599558|gb|EEK57162.1| hypothetical protein bcere0004_14730 [Bacillus cereus BGSC 6E1]
Length = 159
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 6 EADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 53
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 54 GEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 112
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + ++ +IP + ++EY I ++
Sbjct: 113 MFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYFAITQYWF 155
>gi|224541362|ref|ZP_03681901.1| hypothetical protein CATMIT_00522 [Catenibacterium mitsuokai DSM
15897]
gi|224525696|gb|EEF94801.1| hypothetical protein CATMIT_00522 [Catenibacterium mitsuokai DSM
15897]
Length = 345
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 46/239 (19%), Positives = 96/239 (40%), Gaps = 25/239 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTI-LLKHLQFSYQRPLLSP 60
LLS F I + +L I +L++ I + + + +L S
Sbjct: 111 LLSLGFAIGLFVYLFVGPIFFKSSNKIMTVLYAIISFTVFYFLSVLASYCLSAFLNTFHL 170
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K+ + I++LG G P + SRI + + + K + +I+SG
Sbjct: 171 FKKRKLDYIIVLGAGIKGEQVTPLL--------ASRIDKGIEILK----KNPKALLIMSG 218
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + + E + G++ I +E +S +T +N FSS ++ + LV+
Sbjct: 219 GQGKGEDIPEGEAMARYAINKGIDESKILIENKSTNTKENLLFSSKLMTKESP-RVGLVT 277
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++YH+ R+ + ++ GI S ++ ++ ++E++G L ++
Sbjct: 278 TSYHVFRALILAKNLGIRCIGFGS-----------VTKWYFTLNALIREFMGYLSMTWK 325
>gi|323443681|gb|EGB01294.1| hypothetical protein SAO46_0340 [Staphylococcus aureus O46]
Length = 322
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ K+ +II++LG G P + +R+ + +Y+ + II+
Sbjct: 140 HRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQASAT---KIIV 188
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NI 176
SGG + E++ L+ GV++ DI +E+ S++T+ N +S +I N+ K I
Sbjct: 189 SGGQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHKAVKI 248
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ V+S +H+ R+ Q G++ S + + + +K+Y+G++
Sbjct: 249 VCVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQ 297
Query: 237 YY 238
Y
Sbjct: 298 YR 299
>gi|253734225|ref|ZP_04868390.1| membrane protein [Staphylococcus aureus subsp. aureus TCH130]
gi|253727920|gb|EES96649.1| membrane protein [Staphylococcus aureus subsp. aureus TCH130]
Length = 322
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ K+ +II++LG G P + +R+ + +Y+ + II+
Sbjct: 140 HRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQASAT---KIIV 188
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNI 176
SGG ++E++ L+ GV++ DI +E+ S++T+ N +S +I N + I
Sbjct: 189 SGGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKI 248
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ V+S +H+ R+ Q G++ S + + + +K+Y+G++
Sbjct: 249 VCVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQ 297
Query: 237 YY 238
Y
Sbjct: 298 YR 299
>gi|15925348|ref|NP_372882.1| hypothetical protein SAV2358 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927938|ref|NP_375471.1| hypothetical protein SA2148 [Staphylococcus aureus subsp. aureus
N315]
gi|21284008|ref|NP_647096.1| hypothetical protein MW2279 [Staphylococcus aureus subsp. aureus
MW2]
gi|49487141|ref|YP_044362.1| hypothetical protein SAS2249 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650902|ref|YP_187160.1| hypothetical protein SACOL2354 [Staphylococcus aureus subsp. aureus
COL]
gi|87162083|ref|YP_494939.1| hypothetical protein SAUSA300_2304 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88196279|ref|YP_501100.1| hypothetical protein SAOUHSC_02638 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268795|ref|YP_001247738.1| hypothetical protein SaurJH9_2382 [Staphylococcus aureus subsp.
aureus JH9]
gi|150394865|ref|YP_001317540.1| hypothetical protein SaurJH1_2428 [Staphylococcus aureus subsp.
aureus JH1]
gi|151222471|ref|YP_001333293.1| hypothetical protein NWMN_2259 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156980673|ref|YP_001442932.1| hypothetical protein SAHV_2342 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161510552|ref|YP_001576211.1| hypothetical protein USA300HOU_2340 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221141291|ref|ZP_03565784.1| hypothetical protein SauraJ_06573 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253314698|ref|ZP_04837911.1| hypothetical protein SauraC_00695 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255007134|ref|ZP_05145735.2| hypothetical protein SauraM_11715 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257794700|ref|ZP_05643679.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|258407380|ref|ZP_05680523.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258422292|ref|ZP_05685204.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|258439684|ref|ZP_05690430.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258446541|ref|ZP_05694696.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|258450342|ref|ZP_05698434.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|258452631|ref|ZP_05700635.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|262049818|ref|ZP_06022682.1| hypothetical protein SAD30_0164 [Staphylococcus aureus D30]
gi|262052093|ref|ZP_06024302.1| hypothetical protein SA930_1560 [Staphylococcus aureus 930918-3]
gi|269203990|ref|YP_003283259.1| hypothetical protein SAAV_2423 [Staphylococcus aureus subsp. aureus
ED98]
gi|282925248|ref|ZP_06332907.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|282926912|ref|ZP_06334539.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|284025381|ref|ZP_06379779.1| hypothetical protein Saura13_12367 [Staphylococcus aureus subsp.
aureus 132]
gi|294848900|ref|ZP_06789645.1| hypothetical protein SKAG_00971 [Staphylococcus aureus A9754]
gi|295405045|ref|ZP_06814858.1| hypothetical protein SMAG_00190 [Staphylococcus aureus A8819]
gi|296275444|ref|ZP_06857951.1| hypothetical protein SauraMR_03830 [Staphylococcus aureus subsp.
aureus MR1]
gi|297209823|ref|ZP_06926219.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297244102|ref|ZP_06927992.1| hypothetical protein SLAG_00189 [Staphylococcus aureus A8796]
gi|300910835|ref|ZP_07128285.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|304379551|ref|ZP_07362285.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|13702309|dbj|BAB43450.1| SA2148 [Staphylococcus aureus subsp. aureus N315]
gi|14248132|dbj|BAB58520.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50]
gi|21205451|dbj|BAB96144.1| MW2279 [Staphylococcus aureus subsp. aureus MW2]
gi|49245584|emb|CAG44062.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285088|gb|AAW37182.1| membrane protein, putative [Staphylococcus aureus subsp. aureus
COL]
gi|87128057|gb|ABD22571.1| putative membrane protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203837|gb|ABD31647.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741864|gb|ABQ50162.1| protein of unknown function DUF218 [Staphylococcus aureus subsp.
aureus JH9]
gi|149947317|gb|ABR53253.1| protein of unknown function DUF218 [Staphylococcus aureus subsp.
aureus JH1]
gi|150375271|dbj|BAF68531.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156722808|dbj|BAF79225.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|160369361|gb|ABX30332.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257788672|gb|EEV27012.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257840892|gb|EEV65343.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257841723|gb|EEV66160.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257847460|gb|EEV71462.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257854609|gb|EEV77557.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|257856434|gb|EEV79343.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|257859703|gb|EEV82547.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|259159994|gb|EEW45029.1| hypothetical protein SA930_1560 [Staphylococcus aureus 930918-3]
gi|259162125|gb|EEW46703.1| hypothetical protein SAD30_0164 [Staphylococcus aureus D30]
gi|262076280|gb|ACY12253.1| hypothetical protein SAAV_2423 [Staphylococcus aureus subsp. aureus
ED98]
gi|269941943|emb|CBI50354.1| putative membrane protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282591363|gb|EFB96436.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|282592649|gb|EFB97658.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|285818021|gb|ADC38508.1| Integral membrane protein [Staphylococcus aureus 04-02981]
gi|294824279|gb|EFG40703.1| hypothetical protein SKAG_00971 [Staphylococcus aureus A9754]
gi|294969990|gb|EFG46008.1| hypothetical protein SMAG_00190 [Staphylococcus aureus A8819]
gi|296885496|gb|EFH24433.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297178880|gb|EFH38125.1| hypothetical protein SLAG_00189 [Staphylococcus aureus A8796]
gi|300887815|gb|EFK83010.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|302752229|gb|ADL66406.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304341896|gb|EFM07801.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312830705|emb|CBX35547.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315128719|gb|EFT84720.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|315198096|gb|EFU28427.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|329315045|gb|AEB89458.1| Membrane protein, putative [Staphylococcus aureus subsp. aureus
T0131]
gi|329723592|gb|EGG60121.1| putative membrane protein [Staphylococcus aureus subsp. aureus
21172]
gi|329726055|gb|EGG62528.1| putative membrane protein [Staphylococcus aureus subsp. aureus
21189]
gi|329730403|gb|EGG66793.1| putative membrane protein [Staphylococcus aureus subsp. aureus
21193]
Length = 322
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ K+ +II++LG G P + +R+ + +Y+ + II+
Sbjct: 140 HRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQASAT---KIIV 188
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNI 176
SGG ++E++ L+ GV++ DI +E+ S++T+ N +S +I N + I
Sbjct: 189 SGGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKI 248
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ V+S +H+ R+ Q G++ S + + + +K+Y+G++
Sbjct: 249 VCVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQ 297
Query: 237 YY 238
Y
Sbjct: 298 YR 299
>gi|317496202|ref|ZP_07954562.1| hypothetical protein HMPREF0432_01166 [Gemella moribillum M424]
gi|316913777|gb|EFV35263.1| hypothetical protein HMPREF0432_01166 [Gemella moribillum M424]
Length = 355
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 45/237 (18%), Positives = 93/237 (39%), Gaps = 24/237 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L I L++ Y R + ++ +I ++ I + + +
Sbjct: 107 LGTIILLIGYVVWWPSIGRYTYESMTLNGIYIYITLVVLYFICIGVSYLAASTLNIINLL 166
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + +V+LG G P + SRI +++Y +I+SGG
Sbjct: 167 PRKLDYVVVLGAGLIGERVTPLL--------ASRIRTGIKIY----SKHPGSKLIMSGGQ 214
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ N LE GV +DI +E +S +T +N +FS ++K++ LV++
Sbjct: 215 GADEVVSEAFAMKNYALEQGVSEEDIIMEDKSTNTEENIKFSKRLMKDVN-SRFALVTNY 273
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YH+ R+ + + G + + ++ ++E+IG L +
Sbjct: 274 YHVYRALVLAKTLGFRCIGYGAP-----------TKFYFTLNAFIREFIGYLYLKRK 319
>gi|229195925|ref|ZP_04322679.1| hypothetical protein bcere0001_14870 [Bacillus cereus m1293]
gi|228587567|gb|EEK45631.1| hypothetical protein bcere0001_14870 [Bacillus cereus m1293]
Length = 159
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+ +PS+ RI + K+ ++ I+SGG +
Sbjct: 6 EADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKAHEKAIA----IVSGGKGK 53
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 54 GEDISEALAMKNGLMKLKIAEDRIIMEDRSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 112
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 113 MFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWF 155
>gi|324325732|gb|ADY20992.1| hypothetical protein YBT020_08730 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 192
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 80/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 39 EADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 86
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N L++ +E D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 87 GEDISEALAMKNGLMKLKIEEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 145
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + ++ +IP + ++EY+ I ++
Sbjct: 146 MFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWF 188
>gi|311697190|gb|ADQ00062.1| protein containing DUF218 [marine bacterium HP15]
Length = 159
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 81 TIPAIRIEPSFQS-YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ + P+ +S R++ RL+ + K ++++GG H A S +
Sbjct: 3 PVSIGELYPNLESGADRVWHAARLFNASK----APLVLLTGGSDPSHSAA-SEAMRQFMR 57
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ V + LE++S +T QNA++S+ ++ I+LV+ AYH+ R++ F+ G+
Sbjct: 58 DLRVPGQALVLESRSRNTSQNAEYSAEILTEQGVNRILLVTFAYHMPRAKALFEAQGLEV 117
Query: 200 KASCSDY----LNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+D+ + S++P ++ + +KE +G L+ +
Sbjct: 118 ILVATDHEVLSRPLWRSLLPETSALDGSSRVIKEIVGRLVGH 159
>gi|323467429|gb|ADX71116.1| Membrane protein [Lactobacillus helveticus H10]
Length = 343
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 92/234 (39%), Gaps = 25/234 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ +++ ++ + K S + + F+ II + + + L
Sbjct: 114 MGIVIIFFLFFYPQLGKFSHDSWLVYPYGFLWLVIIYLVTIMMMYTLTAWINLINWHVPH 173
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ +V+LG G P + +RI + +Y+ + +I+SGG
Sbjct: 174 LDYVVVLGAGIIGKTVTPLL--------AARITRGIEIYQ----KNPGSKLIMSGGQGPG 221
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ E+ + G+ ++DI +E +S T +N +FS +++K +V+++YH+
Sbjct: 222 EDIPEAEAMAEYAINLGIPKEDIIIENKSRTTNENLRFSHALMKPN--SKFCIVTNSYHV 279
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+ + + G+ + + ++ ++E+I L+ R
Sbjct: 280 YRALVLAKRQGLQCIGYGA-----------KTKWYFTLNAFVREFIAYLVITKR 322
>gi|258442759|ref|ZP_05691319.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|282893804|ref|ZP_06302036.1| hypothetical protein SGAG_01156 [Staphylococcus aureus A8117]
gi|257851880|gb|EEV75814.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|282763862|gb|EFC03990.1| hypothetical protein SGAG_01156 [Staphylococcus aureus A8117]
Length = 322
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ K+ +II++LG G P + +R+ + +Y+ + II+
Sbjct: 140 HRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQASAT---KIIV 188
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNI 176
SGG ++E++ L+ GV++ DI +E+ S++T+ N +S +I N + I
Sbjct: 189 SGGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKI 248
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ V+S +H+ R+ Q G++ S + + + +K+Y+G++
Sbjct: 249 VCVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQ 297
Query: 237 YY 238
Y
Sbjct: 298 YR 299
>gi|331701646|ref|YP_004398605.1| hypothetical protein Lbuc_1288 [Lactobacillus buchneri NRRL
B-30929]
gi|329128989|gb|AEB73542.1| protein of unknown function DUF218 [Lactobacillus buchneri NRRL
B-30929]
Length = 351
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 32/219 (14%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
F++ + W + ++LL L F + + + I++LG G
Sbjct: 136 FLTMLIAYILLTVWNTLSSMLLYQLYFP----------RSNKDYIIVLGAGLVD------ 179
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQH-SMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ RI + + Y + ++ SGG L ES+ + LE G
Sbjct: 180 -GHKVGRLLGGRINKGIAFYNQQIHRTNKRAKLVFSGGQGGDELLPESVAMRDYALEHGA 238
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSSAYHLKRSQLYFQHFGINTK 200
D +E QS++TFQN +FS ++I G I+ V+S YH R+ + + G++
Sbjct: 239 RGADTLIEDQSVNTFQNMKFSKALIDKDAGSTNHRIVFVTSNYHTLRAGILSREVGMHAF 298
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S + +YL ++EY+ +++ + +
Sbjct: 299 GIGS-----------KTPFYYLPNAVIREYLALVVMHKK 326
>gi|229096200|ref|ZP_04227173.1| hypothetical protein bcere0020_14480 [Bacillus cereus Rock3-29]
gi|229102312|ref|ZP_04233021.1| hypothetical protein bcere0019_14730 [Bacillus cereus Rock3-28]
gi|229115155|ref|ZP_04244565.1| hypothetical protein bcere0017_14500 [Bacillus cereus Rock1-3]
gi|228668295|gb|EEL23727.1| hypothetical protein bcere0017_14500 [Bacillus cereus Rock1-3]
gi|228681213|gb|EEL35381.1| hypothetical protein bcere0019_14730 [Bacillus cereus Rock3-28]
gi|228687160|gb|EEL41065.1| hypothetical protein bcere0020_14480 [Bacillus cereus Rock3-29]
Length = 159
Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 6 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKTIA----IVSGGQGK 53
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ L++ + D I +E +S T +N FS +I K +I V++ +H
Sbjct: 54 GEDISEALAMKQGLMKQNIAEDRIIMEDKSTSTDENITFSKPLIPANMKKGMI-VTNDFH 112
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 113 MFRAKKIAAKQGLQLEGLPAK--TPKPIIIPSN---------VREYLAITQYWF 155
>gi|118477152|ref|YP_894303.1| hypothetical protein BALH_1456 [Bacillus thuringiensis str. Al
Hakam]
gi|118416377|gb|ABK84796.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 192
Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 39 EADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 86
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 87 GEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 145
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + ++ +IP + ++EY I ++
Sbjct: 146 MFRAKKIAAKQGLQLEGLPAE--TPKRIVIPSN---------IREYFAITQYWF 188
>gi|228945317|ref|ZP_04107672.1| hypothetical protein bthur0007_14800 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228814289|gb|EEM60555.1| hypothetical protein bthur0007_14800 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 159
Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ R+ + KS ++ I+SGG +
Sbjct: 6 DADYIIVLGS--------KVNGTKPSYSLQYRMDKAAEYLKSHEKAIA----IVSGGKGK 53
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 54 GEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 112
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ + + + +IP + ++EY+ I ++
Sbjct: 113 MFRAKKIAAKQNLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWF 155
>gi|318042858|ref|ZP_07974814.1| hypothetical protein SCB01_14194 [Synechococcus sp. CB0101]
Length = 268
Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 43/239 (17%), Positives = 88/239 (36%), Gaps = 20/239 (8%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + + L + L+ L+ L+P+ + +V+LG G
Sbjct: 33 SRPRWGMGLSGAGIGLIWLFAMPLTSRQLIWGLEEQ--AAALTPRQIPRADAVVVLGGGL 90
Query: 77 TII-PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
A+ + +R K+ + + + GDP E++
Sbjct: 91 RPALAPRQAVEVAEGGDRLLTGLRLLRQNKAPVLLTSGGQVTFTAGDP---APPEALSAQ 147
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF-QH 194
+E G+ + I +S T + A+ + + + ++LV+SA+H+ RS F Q
Sbjct: 148 ALAIELGMPPERILTNPRSRTTAEEARDIGQLARKRGWRTVLLVTSAFHMPRSLATFQQR 207
Query: 195 FGINTKASCSDYLNA-------------YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
G+ DY ++P + +L+ +ALKE++G+ + RG
Sbjct: 208 SGLRVIPVACDYQLPTRARYGKPTAGSVLKGLVPEAEALHLSSVALKEHLGLALYRLRG 266
>gi|307707010|ref|ZP_07643807.1| conserved hypothetical protein [Streptococcus mitis SK321]
gi|307617536|gb|EFN96706.1| conserved hypothetical protein [Streptococcus mitis SK321]
Length = 339
Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 57/246 (23%), Positives = 99/246 (40%), Gaps = 38/246 (15%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMS--CFMLLFSFI-------GWGIIPTILLKHLQF 51
MLL + L+ R F + +LF+FI G+ + IL L
Sbjct: 95 MLLGIVILLFFALMSFRLGGRHELFYTNHFLNILFAFIAYSYFIFGFAFVAFILYSIL-- 152
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
L KK + I++ G G + ++ P + RI + + Y K +
Sbjct: 153 -----YLFIPKKKHYDFIIIHGAGL-----LDGEKVTPLLKR--RIDKAVEAYH--KSKN 198
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
H II SGG ++E+ N LL E+ V +D I LE QS T++N FS + +
Sbjct: 199 PHIKIIASGGQGGDEKISEAQAITNYLLKETDVPQDAIILEDQSRTTYENLLFSKELGEK 258
Query: 171 MQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
+ K + V++ YH+ R+ Y + + +A +Y+ ++E
Sbjct: 259 LVAKPQFLFVTNDYHVFRTSTYARKLKMKGDGLGC-----------RTAGYYIPSAFIRE 307
Query: 230 YIGILI 235
Y+ + +
Sbjct: 308 YVALCV 313
>gi|256843931|ref|ZP_05549418.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256849507|ref|ZP_05554939.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|293381368|ref|ZP_06627369.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
gi|312983993|ref|ZP_07791342.1| putative membrane protein [Lactobacillus crispatus CTV-05]
gi|256613836|gb|EEU19038.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256713623|gb|EEU28612.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|290922058|gb|EFD99059.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
gi|310894670|gb|EFQ43743.1| putative membrane protein [Lactobacillus crispatus CTV-05]
Length = 343
Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 38/229 (16%), Positives = 87/229 (37%), Gaps = 28/229 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ + + L I ++ + + ++ +++ L
Sbjct: 118 IIFFLFLYPLVGRISHDSWLKYPYIFLWLVIIYLVTIMMMYTLTSWINLINWH---MPHL 174
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G P + +RI + +Y + +I+SGG
Sbjct: 175 DYIVVLGAGIMGTKVTPLL--------AARISRGIEIYH----KNPGSKLIMSGGQGPGE 222
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ E++ + G+ ++DI +E +S T QN QFS +++K +V+S+YH+
Sbjct: 223 DIPEAVAMAEYAEKLGINKNDIIIENKSKTTQQNLQFSHALMKPN--SRFCIVTSSYHVY 280
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
R+ + + G+ + + ++ ++E+I L+
Sbjct: 281 RALVLAKRQGLKCTGYGA-----------KTKWYFTLNAFVREFIAYLV 318
>gi|313633948|gb|EFS00656.1| integral membrane protein [Listeria seeligeri FSL N1-067]
Length = 344
Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 99/230 (43%), Gaps = 25/230 (10%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
++ + Q+ ++ + + + + +G+ + F YQ + + + +++
Sbjct: 114 WFGNIIQANNQVLGIVI-VFIVTLVGYFSFLFLSFLLSTFIYQYNF----PRYNQDFLIV 168
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGGDPQKHGLAE 130
LG+G +P + SR+ + Y K + T I+SGG ++E
Sbjct: 169 LGSGLIGGDRVPPL-------LASRLDRAIAFYEKQLAKKGKRATFIVSGGQGDNEIISE 221
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQ 189
+ L+ G++ I +E +S++T QN QFS + + + N + ++ +HL R+
Sbjct: 222 AEAMRGYLISKGIDETFIIMENKSVNTLQNMQFSKKKMDAIMPEYNSLFSTNNFHLFRAS 281
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
LY + G+ ++ + +A +Y+ ++E+I + Y +
Sbjct: 282 LYARKAGLKSQGIGA-----------KTALYYMPNALIREFIATIFMYKK 320
>gi|302529268|ref|ZP_07281610.1| predicted protein [Streptomyces sp. AA4]
gi|302438163|gb|EFL09979.1| predicted protein [Streptomyces sp. AA4]
Length = 331
Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 89/214 (41%), Gaps = 22/214 (10%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
++ + L + + + + +L +++ LL P+ + +++LG+ I
Sbjct: 119 VAGAIGLTALALFSYLGFLFCCYLGYAFLYSLLPPRSGV--DFVIVLGS------RIIGG 170
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R+ P S R+ + +Y + II SGG E+ L G+
Sbjct: 171 RVPPLLAS--RLDKAKSVYLAECAAGADPVIIASGGQGPGESEPEAHAMAEYLRAGGIPD 228
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ E +S T QN +FS ++ G ++V++ +H+ R+ + + G+N + + S
Sbjct: 229 SALLREDRSKTTEQNLEFSRRLMAERVPGYRCVIVTNNFHVLRTAIIAREAGVNGEVTGS 288
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++++Y ++E++ I + Y
Sbjct: 289 -----------RTSSYYWPSATIREFLAIFLRYR 311
>gi|187778517|ref|ZP_02994990.1| hypothetical protein CLOSPO_02112 [Clostridium sporogenes ATCC
15579]
gi|187772142|gb|EDU35944.1| hypothetical protein CLOSPO_02112 [Clostridium sporogenes ATCC
15579]
Length = 181
Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 35/185 (18%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG P ++ R+ E +RLY II+SG
Sbjct: 23 QPQKSDCIIILGCKVKGNDPTPFLQW--------RLDEGLRLYNEGYGKY----IIVSGA 70
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++E+ L+E GV+++ I LE +S +T +N +FS +++ K+ I+VS+
Sbjct: 71 KGPGENISEAEAMEKYLVEKGVDKNFIILEDKSKNTLENIKFSKKKMEDNNLKSSIIVSN 130
Query: 182 AYHLKRSQLYFQHFGIN-------TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
YHLKR++L Q GI K S + ++ IP +L
Sbjct: 131 KYHLKRAELLCQKEGIKASYSGVFVKPHMSHEIVGFFREIP----------------ALL 174
Query: 235 IAYYR 239
+ Y +
Sbjct: 175 VYYVK 179
>gi|303240608|ref|ZP_07327123.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
gi|302591845|gb|EFL61578.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
Length = 259
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 81/180 (45%), Gaps = 25/180 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG G R +PS R+ + + + II+SG
Sbjct: 98 ESNTSVDYVVVLGAGLDS-------RDKPSGPLRLRLDKCI----DYVSKNPFVKIIVSG 146
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G ++E+ L+ +GV + +I +E QS +T +N + + ++I+N+ + N++
Sbjct: 147 GQGFDEEVSEAFAMKEYLVSNGVNQKNIIMEEQSTNTLENIKNTKALIENLPDEKSNNVL 206
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+V++ +HL R+++ + FG ++ + + L+E+ ++ ++
Sbjct: 207 IVTNRFHLFRAKMLAERFGFKAYGMPC-----------ITPLYTIPNNYLREFFAVIKSW 255
>gi|282917710|ref|ZP_06325461.1| hypothetical protein SATG_02569 [Staphylococcus aureus subsp.
aureus D139]
gi|283767447|ref|ZP_06340362.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
H19]
gi|282318465|gb|EFB48824.1| hypothetical protein SATG_02569 [Staphylococcus aureus subsp.
aureus D139]
gi|283461326|gb|EFC08410.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
H19]
Length = 322
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 81/182 (44%), Gaps = 24/182 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ K+ +II++LG G P + +R+ + +Y+ + II+
Sbjct: 140 HRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQASAT---KIIV 188
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNI 176
SGG + E++ L+ GV++ DI +E+ S++T+ N +S +I N + I
Sbjct: 189 SGGQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKI 248
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ V+S +H+ R+ Q G++ S + + + +K+Y+G++
Sbjct: 249 VCVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQ 297
Query: 237 YY 238
Y
Sbjct: 298 YR 299
>gi|328463014|gb|EGF34808.1| hypothetical protein AAULH_13826 [Lactobacillus helveticus MTCC
5463]
Length = 222
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 73/176 (41%), Gaps = 25/176 (14%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ +V+LG G P + +RI + +Y+ + +I+SGG
Sbjct: 51 PHLDYVVVLGAGIMGKTITPLL--------AARITRGIEIYQ----KNPGSKLIMSGGQG 98
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ E+ + G+ ++DI +E +S T +N +FS +++K +V+++Y
Sbjct: 99 PGEDILEAEAMAEYAINLGIPKEDIIIENKSRTTNENLRFSYALMKPN--SKFCIVTNSY 156
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
H+ R+ + + G+ + + ++ ++E+I L+ R
Sbjct: 157 HVYRALVLAKRQGLQCIGYGA-----------KTKWYFTLNAFVREFIAYLVITKR 201
>gi|196033543|ref|ZP_03100955.1| conserved hypothetical protein [Bacillus cereus W]
gi|195993977|gb|EDX57933.1| conserved hypothetical protein [Bacillus cereus W]
Length = 192
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ R+ + KS ++ I+SGG +
Sbjct: 39 DADYIIVLGS--------KVNGTKPSYSLQYRMDKAAEYLKSHEKAIA----IVSGGKGK 86
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 87 GEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 145
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ + + + +IP + ++EY+ I ++
Sbjct: 146 MFRAKKIAAKQNLQLEGLPA--ATPKRIVIPSN---------IREYLAITQYWF 188
>gi|49484573|ref|YP_041797.1| hypothetical protein SAR2444 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257423840|ref|ZP_05600269.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257426523|ref|ZP_05602925.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429159|ref|ZP_05605546.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257431805|ref|ZP_05608168.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257434765|ref|ZP_05610816.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282902270|ref|ZP_06310163.1| putative membrane protein [Staphylococcus aureus subsp. aureus
C160]
gi|282906699|ref|ZP_06314547.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282909675|ref|ZP_06317484.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911921|ref|ZP_06319717.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282915217|ref|ZP_06322994.1| putative membrane protein [Staphylococcus aureus subsp. aureus
M899]
gi|282920941|ref|ZP_06328659.1| hypothetical protein SASG_01122 [Staphylococcus aureus subsp.
aureus C427]
gi|282925847|ref|ZP_06333495.1| hypothetical protein SARG_01174 [Staphylococcus aureus subsp.
aureus C101]
gi|283959139|ref|ZP_06376580.1| putative membrane protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293497613|ref|ZP_06665467.1| hypothetical protein SCAG_00186 [Staphylococcus aureus subsp.
aureus 58-424]
gi|293511192|ref|ZP_06669888.1| membrane protein [Staphylococcus aureus subsp. aureus M809]
gi|293549800|ref|ZP_06672472.1| putative membrane protein [Staphylococcus aureus subsp. aureus
M1015]
gi|295428939|ref|ZP_06821563.1| hypothetical protein SIAG_02182 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297589565|ref|ZP_06948206.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MN8]
gi|49242702|emb|CAG41426.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257272858|gb|EEV04960.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257276154|gb|EEV07605.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279640|gb|EEV10227.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257282684|gb|EEV12816.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257285361|gb|EEV15477.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282312676|gb|EFB43080.1| hypothetical protein SARG_01174 [Staphylococcus aureus subsp.
aureus C101]
gi|282315356|gb|EFB45740.1| hypothetical protein SASG_01122 [Staphylococcus aureus subsp.
aureus C427]
gi|282320938|gb|EFB51272.1| putative membrane protein [Staphylococcus aureus subsp. aureus
M899]
gi|282323617|gb|EFB53933.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282326249|gb|EFB56553.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282329598|gb|EFB59119.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596729|gb|EFC01688.1| putative membrane protein [Staphylococcus aureus subsp. aureus
C160]
gi|283788731|gb|EFC27558.1| putative membrane protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290918847|gb|EFD95923.1| putative membrane protein [Staphylococcus aureus subsp. aureus
M1015]
gi|291096544|gb|EFE26802.1| hypothetical protein SCAG_00186 [Staphylococcus aureus subsp.
aureus 58-424]
gi|291465818|gb|EFF08348.1| membrane protein [Staphylococcus aureus subsp. aureus M809]
gi|295127288|gb|EFG56930.1| hypothetical protein SIAG_02182 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297578076|gb|EFH96789.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MN8]
gi|312437225|gb|ADQ76296.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH60]
gi|315193624|gb|EFU24020.1| hypothetical protein CGSSa00_14298 [Staphylococcus aureus subsp.
aureus CGS00]
Length = 322
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 24/179 (13%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ K+ +II++LG G P + +R+ + +Y+ + II+SGG
Sbjct: 143 YNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQASAT---KIIVSGG 191
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNIILV 179
+ E++ L+ GV++ DI +E+ S++T+ N +S +I N + I+ V
Sbjct: 192 QGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIVCV 251
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S +H+ R+ Q G++ S + + + +K+Y+G++ Y
Sbjct: 252 TSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQYR 299
>gi|149914159|ref|ZP_01902690.1| hypothetical protein RAZWK3B_19201 [Roseobacter sp. AzwK-3b]
gi|149811678|gb|EDM71511.1| hypothetical protein RAZWK3B_19201 [Roseobacter sp. AzwK-3b]
Length = 260
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 46/239 (19%), Positives = 89/239 (37%), Gaps = 19/239 (7%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
VS + + I+ + L S + I L+ ++ Y P
Sbjct: 28 VSVFAFWRRKIKLAVMTMLGLFLALSLMAVMPIGQALVARIEAQYAPPSSLDSLAG---- 83
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ---- 124
IV+LG G +P R+ T+ L + I+ +GG +
Sbjct: 84 IVVLGGG-ENLPASSRWDTVVLGDGAERLTATLELARRF----PDAKIVYAGGSGRVRDA 138
Query: 125 -KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
L E+ + + LL G+ + + + S +T +NA + + G+ +LV+SA+
Sbjct: 139 FGAQLTEADIAQHFLLNMGLAPERLLTDPTSRNTAENAARAMELATPEVGQTWVLVTSAF 198
Query: 184 HLKRSQLYFQHFGI-NTKASCSDYLNAYYSI---IPLSANFYLTELALKEYIGILIAYY 238
H+ R+ F+ G DY ++ L+ N + ++A++E +G
Sbjct: 199 HMPRAIRSFEAAGWSELVPYPVDYRTGTFTNGLGWDLTGNLAMLQIAIREAVGSFAYRL 257
>gi|82751953|ref|YP_417694.1| hypothetical protein SAB2237 [Staphylococcus aureus RF122]
gi|258425099|ref|ZP_05687970.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|82657484|emb|CAI81926.1| probable membrane protein [Staphylococcus aureus RF122]
gi|257844933|gb|EEV68976.1| conserved hypothetical protein [Staphylococcus aureus A9635]
Length = 322
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 81/182 (44%), Gaps = 24/182 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ K+ +II++LG G P + +R+ + +Y+ + II+
Sbjct: 140 HRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQASAT---KIIV 188
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNI 176
SGG + E++ L+ GV++ DI +E+ S++T+ N +S +I N + I
Sbjct: 189 SGGQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKI 248
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ V+S +H+ R+ Q G++ S + + + +K+Y+G++
Sbjct: 249 VCVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQ 297
Query: 237 YY 238
Y
Sbjct: 298 YR 299
>gi|327184380|gb|AEA32827.1| hypothetical protein LAB52_09625 [Lactobacillus amylovorus GRL
1118]
Length = 319
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 46/230 (20%), Positives = 91/230 (39%), Gaps = 29/230 (12%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
I L++ + + +F F+ LF + + I++ + ++ L K
Sbjct: 89 IILLIFAYPAFGRFNSAPWFR--FIYLFLSMSILYLIFIMMMYTLTAWLN--LINFNIKK 144
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
N IV+LG G P + SRI + +Y + +I+SGG
Sbjct: 145 LNYIVVLGAGLIGKKVTPLL--------ASRIDRGIEIYH----KNPGSKLIMSGGQGSD 192
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ ES E GV + DI +E +S T QN +FS +++ +V+++YH+
Sbjct: 193 EEIPESHAMAAYAEEHGVPQSDIIIEDRSKKTNQNLKFSHQLMQ--PDSTFCIVTNSYHV 250
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
R+ + + G+ + + ++ ++E+I L+
Sbjct: 251 YRALVLAKRQGLKCIGYGA-----------KTKWYFTLNAFIREFIAYLV 289
>gi|83311553|ref|YP_421817.1| hypothetical protein amb2454 [Magnetospirillum magneticum AMB-1]
gi|82946394|dbj|BAE51258.1| Uncharacterized conserved protein [Magnetospirillum magneticum
AMB-1]
Length = 266
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 49/237 (20%), Positives = 95/237 (40%), Gaps = 21/237 (8%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
RKI ++ L+F+ + + L L+ +Q P P + I++LG
Sbjct: 32 RRWLSLGRKILSITLLTLVFTSV--FPVEKWALAWLEDRFQTPDPLPD---KVDGIIILG 86
Query: 74 NGTTIIPTIPAIRIEPSF-QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAE 130
I P A R + S + +R+ E + L + + ++ +GG E
Sbjct: 87 G--AISPEQSAARGQVSVGSAVTRMTEMIPLARRYPE----ARVVFTGGSGNAFDQEHRE 140
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ + G E + E S +T +NA S +++ G+ +L++SA+H+ R+
Sbjct: 141 ADYAEMFYRDIGFETGRMVFERDSRNTRENATLSKELMQPKPGETWLLITSAWHMPRAVG 200
Query: 191 YFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTEL--ALKEYIGILIAYYRG 240
F+ G DY ++S + S ++ L + E +G++I G
Sbjct: 201 CFRAVGWPVVPIPVDYQTSGISRPWWSELRFSPQKGISGLGPLIHEGLGLIIYRLMG 257
>gi|228907351|ref|ZP_04071209.1| hypothetical protein bthur0013_15180 [Bacillus thuringiensis IBL
200]
gi|228852212|gb|EEM97008.1| hypothetical protein bthur0013_15180 [Bacillus thuringiensis IBL
200]
Length = 194
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 41 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKTIA----IVSGGQGK 88
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ L++ + D I +E +S T +N FS +I K +I V++ +H
Sbjct: 89 GEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTNDFH 147
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 148 MFRAKKIAAKQGLQLEGLPAK--TPKPIIIPSN---------VREYLAITQYWF 190
>gi|218896648|ref|YP_002445059.1| hypothetical protein BCG9842_B3664 [Bacillus cereus G9842]
gi|218542086|gb|ACK94480.1| conserved hypothetical protein [Bacillus cereus G9842]
Length = 192
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 39 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKTIA----IVSGGQGK 86
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ L++ + D I +E +S T +N FS +I K +I V++ +H
Sbjct: 87 GEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTNDFH 145
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 146 MFRAKKIAAKQGLQLEGLPAK--TPKPIIIPSN---------VREYLAITQYWF 188
>gi|289522163|ref|ZP_06439017.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503999|gb|EFD25163.1| conserved hypothetical protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 254
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 51/246 (20%), Positives = 105/246 (42%), Gaps = 21/246 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ +F+ + + + L F + I I+L L+ +++P
Sbjct: 18 ILVLLLFIASLLAFKRPRKVFLGCLLLLIALSFYLLSTPITSRIVLGKLEN-----MVAP 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
D IV+LG G + P + R+F + L + I++ G
Sbjct: 73 SLPADKAAIVVLGGGQRRTSDPDKAEVSP--HTLMRLFGGIELAL-----KFNWPILLCG 125
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + + E++ K+ E I E+QS T++N + +SS++++++ K+ +LV+
Sbjct: 126 GSYSQE-VPEAMTMAKKVKEL-FPDLPIYEESQSRTTWENIKNASSILRSLELKHAVLVT 183
Query: 181 SAYHLKRSQLYFQHFG--INTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGI 233
YH+ R+ L Q IN + + +P +++ ++ LALKE++GI
Sbjct: 184 HGYHMPRAHLIAQGLAPEINWHPFPVGKMADNAPLSIIDFLPGASSLHINSLALKEHVGI 243
Query: 234 LIAYYR 239
+ +
Sbjct: 244 IAYRIK 249
>gi|228900299|ref|ZP_04064529.1| hypothetical protein bthur0014_15050 [Bacillus thuringiensis IBL
4222]
gi|228859334|gb|EEN03764.1| hypothetical protein bthur0014_15050 [Bacillus thuringiensis IBL
4222]
Length = 172
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 19 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKTIA----IVSGGQGK 66
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ L++ + D I +E +S T +N FS +I K +I V++ +H
Sbjct: 67 GEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTNDFH 125
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 126 MFRAKKIAAKQGLQLEGLPAK--TPKPIIIPSN---------VREYLAITQYWF 168
>gi|229132528|ref|ZP_04261378.1| hypothetical protein bcere0014_14610 [Bacillus cereus BDRD-ST196]
gi|228650965|gb|EEL06950.1| hypothetical protein bcere0014_14610 [Bacillus cereus BDRD-ST196]
Length = 159
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + Y ++ I+SGG +
Sbjct: 6 DADYIIVLGS--------KVNGTQPSYSLQYRIDKAAE-YLKLHDKTIA---IVSGGQGK 53
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E++ L++ + D I +E +S T +N +FS +I K +I V++ +H
Sbjct: 54 GEDITEALAMKQGLMKQNIAEDRIIMEDKSTSTDENIKFSKPLIPANMKKGMI-VTNDFH 112
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 113 MFRAKKIAAKQGLQLEGLPAK--TPKPIIIPSN---------VREYLAITQYWF 155
>gi|325000419|ref|ZP_08121531.1| hypothetical protein PseP1_16707 [Pseudonocardia sp. P1]
Length = 334
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 83/212 (39%), Gaps = 27/212 (12%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
+LL ++ + + +Y + + +V+LG G P +R
Sbjct: 127 IALLLLTVYVAFLFCSFL-------TYAVVYGRLAARPGVDFVVVLGAGLIRGKVTPLLR 179
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
SR+ + L + ++ SGG LAE+ LLE GV D
Sbjct: 180 --------SRLDRAIALRRREMGMGNDPVLVTSGGRGPDEPLAEAEAMAGYLLEQGVPED 231
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+ E +S T +N FS ++ + ++V++ +H+ R+ L + G++ + S
Sbjct: 232 AVLREDRSRTTLENLTFSDRLMAGRVPRYRCVVVTNNFHVFRTALLARQAGVDAQVLGSP 291
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+A +Y ++E++ IL A+
Sbjct: 292 -----------TARYYWPSATIREFVAILAAH 312
>gi|94499865|ref|ZP_01306401.1| hypothetical protein RED65_15127 [Oceanobacter sp. RED65]
gi|94428066|gb|EAT13040.1| hypothetical protein RED65_15127 [Oceanobacter sp. RED65]
Length = 256
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 92/206 (44%), Gaps = 13/206 (6%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
W + T LL++++ +Y K+ + +++LGN P++P + S + +
Sbjct: 59 FSWHPVTTPLLRNIEQTYSGF----DIKQPVDYVIVLGNKVESDPSVP-LTSHLSSSATA 113
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ E +R+ + + T SG + + + VY + G++ I +
Sbjct: 114 RLMEGLRILNANPNGKLIVTGYASG-----NSKSSAQVYKEVAIAMGIDESRIIALEEPK 168
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL---NAYYS 212
DT + A ++ + N + NI+LV+SA H+ R+ ++FQ + + + + + ++
Sbjct: 169 DTVEEANAVANALNNHKDLNIVLVTSASHMPRAIIFFQSYFPDIQPAPTFFIAKHTESTD 228
Query: 213 IIPLSANFYLTELALKEYIGILIAYY 238
SA E A+ EY+G +
Sbjct: 229 WRFDSAGLLKAERAIYEYLGQAWQWL 254
>gi|260914137|ref|ZP_05920610.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260631770|gb|EEX49948.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 249
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 51/247 (20%), Positives = 95/247 (38%), Gaps = 25/247 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP-LLS 59
++L WIF + + R F+ +L S I + + L+ S L+
Sbjct: 18 VILLWIFAFLLSLFNYKKLSRASAFLGFIILYLSSIPYVA------QKLEDSLVTDDNLT 71
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ IVLLG G + A S E +R Y + Q ++I+
Sbjct: 72 LSDYQQAEAIVLLGGGIRDSKELYAKLTVNSIP-----LERVR-YAAYLQKETELPLLIT 125
Query: 120 GGDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G +E+ V +L V +E ++ T +NA +++ ++K IIL
Sbjct: 126 GSSGA--PQSEAEVAAIELRYFFNVPTK--WIEPKARTTKENAIYTAEILKKEGINKIIL 181
Query: 179 VSSAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYI 231
V++ +H++R+ L ++ G + + Y + +P + L LKE++
Sbjct: 182 VTNQWHMQRATLLYERQGFKVLPASVGSGETPAVYGVGIWHFLPQAGVINKNMLLLKEWL 241
Query: 232 GILIAYY 238
G L
Sbjct: 242 GYLKEKL 248
>gi|153004625|ref|YP_001378950.1| hypothetical protein Anae109_1763 [Anaeromyxobacter sp. Fw109-5]
gi|152028198|gb|ABS25966.1| protein of unknown function DUF218 [Anaeromyxobacter sp. Fw109-5]
Length = 252
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 91/230 (39%), Gaps = 13/230 (5%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
H ++ + + +L+ + + L + ++ +R + + ++L
Sbjct: 30 HRRARAAWTLGLAAAGVLVVFSLA--PVANGLQRFVERGAERTF---RPGAVYDAAIVL- 83
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAES 131
+G A + R+ + L+++ + +++SGG P +E+
Sbjct: 84 SGQVDEAASRASGELELDAAADRVVRGLELWRAGRVR----RLLLSGGPPAAVPGEPSEA 139
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ L+ GV I ++ QS +T +NA S+ + ++++LV+SA H R+
Sbjct: 140 ERLRDALVRWGVPAAAILVDPQSRNTRENAIASAHLAAEHGLRSLLLVTSAAHAPRALGC 199
Query: 192 FQHFGINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
F+ G++ D S +P + + L+E G ++ G
Sbjct: 200 FRAVGLSPDVLPVDRRTGPSGSWLPRAGALEQSTAVLRELAGRVVYRLAG 249
>gi|229011030|ref|ZP_04168224.1| hypothetical protein bmyco0001_14820 [Bacillus mycoides DSM 2048]
gi|229166553|ref|ZP_04294306.1| hypothetical protein bcere0007_15250 [Bacillus cereus AH621]
gi|228616957|gb|EEK74029.1| hypothetical protein bcere0007_15250 [Bacillus cereus AH621]
gi|228750202|gb|EEM00034.1| hypothetical protein bmyco0001_14820 [Bacillus mycoides DSM 2048]
Length = 159
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + Y ++ I+SGG +
Sbjct: 6 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAE-YLKLHDKTIA---IVSGGQGK 53
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E++ L++ + D I +E +S T +N +FS +I K +I V++ +H
Sbjct: 54 GEDITEALAMKQGLMKQNIAEDRIIMEDKSTSTDENIKFSKPLIPANMKKGMI-VTNDFH 112
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 113 MFRAKKIAAKQGLQLEGLPAK--TPKPIIIPSN---------VREYLAITQYWF 155
>gi|239944530|ref|ZP_04696467.1| hypothetical protein SrosN15_26272 [Streptomyces roseosporus NRRL
15998]
gi|239990990|ref|ZP_04711654.1| hypothetical protein SrosN1_27034 [Streptomyces roseosporus NRRL
11379]
gi|291447993|ref|ZP_06587383.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291350940|gb|EFE77844.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 336
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 19/182 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +V+LG+G T+P + SR+ ++ + +I SG
Sbjct: 153 RVRRKADFVVVLGSGLVGGSTVPPL-------LASRLKRGQAVHARLARRGGSPVLITSG 205
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILV 179
G L ES + L+ G I+ E +S +T +N +FS ++++ + ++V
Sbjct: 206 GQGPDEDLPESHAMADHLVAQGFPAHLIEREDRSTNTEENLRFSKAIMEKAKPDYRCVVV 265
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++ YH R+ L + I + S +A ++ L+E+ IL+ Y R
Sbjct: 266 TNNYHAFRAALTARRVRIRGQVVGSP-----------TAAYFWPNATLREFAAILVDYRR 314
Query: 240 GN 241
N
Sbjct: 315 SN 316
>gi|20808561|ref|NP_623732.1| hypothetical protein TTE2177 [Thermoanaerobacter tengcongensis MB4]
gi|20517188|gb|AAM25336.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
MB4]
Length = 192
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 29/219 (13%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
F +L+F+ + II + + + F + + K + I++LG
Sbjct: 2 SRFLKLVVVLIFAL--FSIIAILAYQIISFGFT------EKPKKSDAIIVLGCAVYGDA- 52
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
PS R+ E ++LYK IIISGG ++E+ LE
Sbjct: 53 -------PSPFFKERLEEALKLYKEGYGRY----IIISGGKGPGESISEAEAGKRYFLEK 101
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV +I L+ +S T++N FS +++ K I+VS+ +HLKR+ + + GI+
Sbjct: 102 GVASKNILLDNKSFSTYENLLFSKEIMEKNSLKTAIIVSNKFHLKRASVIAKRIGIDASF 161
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
S + L+E + +L Y RG
Sbjct: 162 SGVFVKEYVGDEVYG---------FLREVLALLYTYLRG 191
>gi|300691119|ref|YP_003752114.1| hypothetical protein RPSI07_1461 [Ralstonia solanacearum PSI07]
gi|299078179|emb|CBJ50822.1| conserved exported protein of unknown function [Ralstonia
solanacearum PSI07]
Length = 265
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 94/248 (37%), Gaps = 17/248 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L L + + ++ L+ +++ LL L
Sbjct: 21 PLVLALLAGVVAWRVPRWRHPAGWVLGIALIVAWMAATPWCGRLLASWTHPVPPLRLDAL 80
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIE--PSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ +VLLG + A + S S R RL H+ ++ +
Sbjct: 81 QPRGEGAVVLLGGSRKLAAREYAGQGATALSGPSLERTVYAARLA-----HTARLPVLAT 135
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG P+ G+ E+ + + + G +D +ET+S T +NA FS+ +++ + I LV
Sbjct: 136 GGAPEGDGVPEAELMRRLVADMG--QDARWIETRSATTEENAAFSAPILRAAGIQRIYLV 193
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDY--------LNAYYSIIPLSANFYLTELALKEYI 231
+ +H+ R++ YF+ G + + S++P + LT AL+E +
Sbjct: 194 THYWHMARARRYFEGQGFIVTPAPCGWGGEVEESPAGGILSLLPRTDGLMLTRFALREAL 253
Query: 232 GILIAYYR 239
G L R
Sbjct: 254 GQLWLSIR 261
>gi|229017000|ref|ZP_04173920.1| hypothetical protein bcere0030_15650 [Bacillus cereus AH1273]
gi|229023181|ref|ZP_04179692.1| hypothetical protein bcere0029_15230 [Bacillus cereus AH1272]
gi|228738106|gb|EEL88591.1| hypothetical protein bcere0029_15230 [Bacillus cereus AH1272]
gi|228744271|gb|EEL94353.1| hypothetical protein bcere0030_15650 [Bacillus cereus AH1273]
Length = 159
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS + I+SGG +
Sbjct: 6 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHDKTIA----IVSGGQGK 53
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E++ L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 54 GEDITEALAMKQGLMKQNIAEDRIIMEDRSTSTDENIKFSKPLIPDKMKKGMI-VTNDFH 112
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ + + ++ +IP + ++EY+ I ++
Sbjct: 113 MFRAKKIAAKQDLQLEGLPAE--TPKRIVIPSN---------IREYLAITQYWF 155
>gi|307702098|ref|ZP_07639105.1| integral membrane protein [Streptococcus mitis NCTC 12261]
gi|307707431|ref|ZP_07643913.1| integral membrane protein [Streptococcus mitis NCTC 12261]
gi|307616383|gb|EFN95574.1| integral membrane protein [Streptococcus mitis NCTC 12261]
gi|307616585|gb|EFN95775.1| integral membrane protein [Streptococcus mitis NCTC 12261]
Length = 339
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 38/246 (15%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMS--CFMLLFSFI-------GWGIIPTILLKHLQF 51
MLL + L+ R F + +LF+FI G+ + +L L
Sbjct: 95 MLLGIVILLFFALMSFRLGDRNELFYTNHFLNILFAFIAYSYFIFGFAFVGFMLYSIL-- 152
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
L KK + I++ G G + ++ P + RI + + Y + K +
Sbjct: 153 -----YLFIPKKKHYDFIIIHGAGL-----LDGEKVTPLLKR--RIDKAVEAYHNSK--N 198
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
H II SGG ++E+ N LLE V +D I LE QS T++N FS + +
Sbjct: 199 PHIKIIASGGQGGDEKISEAQAITNYLLEETDVPQDGIILEDQSRTTYENLLFSKELGEK 258
Query: 171 MQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
+ K + V++ YH+ R+ Y + + +A +Y+ ++E
Sbjct: 259 LVAKPQFLFVTNDYHVFRTSTYARKLKMKGDGLGC-----------RTAGYYIPSAFIRE 307
Query: 230 YIGILI 235
Y+ + +
Sbjct: 308 YVALCV 313
>gi|229160681|ref|ZP_04288673.1| hypothetical protein bcere0009_14710 [Bacillus cereus R309803]
gi|228622696|gb|EEK79530.1| hypothetical protein bcere0009_14710 [Bacillus cereus R309803]
Length = 159
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ +D + I++LG+ +PS+ RI + K ++ I+SG
Sbjct: 2 KATEDADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKLHEKTIA----IVSG 49
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ N L++ + D I +E +S T +N +FS +I + K +I V+
Sbjct: 50 GQGKGEDISEALAMKNGLMKLKIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VT 108
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ +H+ R++ G+ + + +S+N ++EY+ I ++
Sbjct: 109 NDFHMFRAKKIAAKQGLQLEGLPAKTPKPII----ISSN-------VREYLAITQYWF 155
>gi|260101969|ref|ZP_05752206.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|260084229|gb|EEW68349.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
Length = 309
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 93/234 (39%), Gaps = 25/234 (10%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ +++ ++ + K S + + F+ II + + + L +
Sbjct: 80 MGIVIIFFLFFYPQLGKFSHDSWLVYPYGFLWLVIIYLVTIMMMYTLTAWINLINWYVPH 139
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ +V+LG G P + +RI + +Y+ + +I+SGG
Sbjct: 140 LDYVVVLGAGIMGKTVTPLL--------AARITRGIEIYQ----KNPGSKLIMSGGQGPG 187
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ E+ + G+ ++DI +E +S T +N +FS +++K +V+++YH+
Sbjct: 188 EDILEAEAMAEYAINLGIPKEDIIIENKSRTTNENLRFSYALMKPN--SKFCIVTNSYHV 245
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+ + + G+ + + ++ ++E+I L+ R
Sbjct: 246 YRALVLAKRQGLQCIGYGA-----------KTKWYFTLNAFVREFIAYLVITKR 288
>gi|88801181|ref|ZP_01116724.1| hypothetical protein MED297_12227 [Reinekea sp. MED297]
gi|88776084|gb|EAR07316.1| hypothetical protein MED297_12227 [Reinekea sp. MED297]
Length = 261
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 49/246 (19%), Positives = 96/246 (39%), Gaps = 16/246 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LLS FL L + R + + L IG+ + L+ L+ ++ P
Sbjct: 21 LLLSGAFLAWFLRSRLPRVTRWLSVLVILAL--LLIGFYPVGAWLVYPLEHRFKPPNTEQ 78
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG ++ + E + + R + L + + ++ +G
Sbjct: 79 AP----DGIIVLGGAWRTQSSVYWGQWELN-HAAERDLAMLALARRFPEAE----LVFTG 129
Query: 121 GDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G + E+ V + G+ ++ E++S +T++NA+FS +I L
Sbjct: 130 GSGKLFSQQFKEADVARQLYSDLGLNPVRVQFESESRNTYENARFSQKLINPDVADIWWL 189
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN---FYLTELALKEYIGILI 235
V+SAYH+ R+ F G D+ S P A + E +E++G+ +
Sbjct: 190 VTSAYHMTRATEVFCGIGWRVVPYPVDHFYEPGSWRPNWAFADHLWELERVSREWLGLWV 249
Query: 236 AYYRGN 241
G
Sbjct: 250 YRATGR 255
>gi|228952097|ref|ZP_04114192.1| hypothetical protein bthur0006_15080 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229069269|ref|ZP_04202559.1| hypothetical protein bcere0025_14740 [Bacillus cereus F65185]
gi|229078899|ref|ZP_04211451.1| hypothetical protein bcere0023_15610 [Bacillus cereus Rock4-2]
gi|229178126|ref|ZP_04305497.1| hypothetical protein bcere0005_14880 [Bacillus cereus 172560W]
gi|228605256|gb|EEK62706.1| hypothetical protein bcere0005_14880 [Bacillus cereus 172560W]
gi|228704313|gb|EEL56747.1| hypothetical protein bcere0023_15610 [Bacillus cereus Rock4-2]
gi|228713756|gb|EEL65641.1| hypothetical protein bcere0025_14740 [Bacillus cereus F65185]
gi|228807629|gb|EEM54153.1| hypothetical protein bthur0006_15080 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 194
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 41 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKTIA----IVSGGQGK 88
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ L++ + D I +E +S T +N FS +I K +I V++ +H
Sbjct: 89 GEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTNDFH 147
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 148 MFRAKKIAAKQGLQLEGLPAK--TPKPIIIPSN---------VREYLAITQYWF 190
>gi|329768261|ref|ZP_08259762.1| hypothetical protein HMPREF0428_01459 [Gemella haemolysans M341]
gi|328837460|gb|EGF87089.1| hypothetical protein HMPREF0428_01459 [Gemella haemolysans M341]
Length = 340
Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 48/237 (20%), Positives = 90/237 (37%), Gaps = 25/237 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ FL+V Y + L+ ++ ++ + +
Sbjct: 105 LATFFLLVGYIVYWPRVATYTRDNIALNTLYVYVSLVVLYFLCIAMSYLVSSVLNFINIL 164
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + +V+LG G P + SRI + +++YK + +I+SGG
Sbjct: 165 PRKIDYVVVLGAGLIGERVTPLL--------ASRIRKGIKVYK----SNPGSKLIMSGGQ 212
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ N LE GV+ DI LE +S T QN FS I K+ +V++
Sbjct: 213 GPDEVVSEAFAMKNYALEQGVDEKDIILEDKSTSTEQNIIFSKKFIPA--DKSFAVVTNY 270
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YH+ R+ + + G S + ++ ++E+IG L +
Sbjct: 271 YHVYRALVQARTLGFRCIGYGSP-----------TKFYFSLNAFIREFIGYLYFKRK 316
>gi|167039302|ref|YP_001662287.1| hypothetical protein Teth514_0643 [Thermoanaerobacter sp. X514]
gi|256752180|ref|ZP_05493045.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
CCSD1]
gi|300913942|ref|ZP_07131259.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X561]
gi|307725373|ref|YP_003905124.1| hypothetical protein Thet_2282 [Thermoanaerobacter sp. X513]
gi|166853542|gb|ABY91951.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X514]
gi|256748908|gb|EEU61947.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
CCSD1]
gi|300890627|gb|EFK85772.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X561]
gi|307582434|gb|ADN55833.1| protein of unknown function DUF218 [Thermoanaerobacter sp. X513]
Length = 192
Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 31 LLFSFIGWGIIPTI-LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
LL FIG I+ + ++ L++ L + KK ++I++LG P
Sbjct: 3 LLLRFIGVLIVIFVTVVITLEYQIISFALYEKPKKS-DVIIVLGCAVY--------GKTP 53
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S R+ E +RLYK II+SGG ++E+ LL++G+ I
Sbjct: 54 SPFFKERLDEALRLYKEGYGKY----IIVSGGKGPGENISEAEAGKEYLLKNGIPEKIIL 109
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ +SL T++N FS ++ K I++S+ +HLKR+ + + GI+ AS S L
Sbjct: 110 TDNKSLSTYENLFFSKEIMDKNSLKTAIIISNKFHLKRASVIAKRIGID--ASYSGVLLK 167
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYYR 239
Y + + F L+E +L Y +
Sbjct: 168 RYMLSDEAYGF------LREIPALLYTYLK 191
>gi|309799013|ref|ZP_07693269.1| integral membrane protein [Streptococcus infantis SK1302]
gi|308117363|gb|EFO54783.1| integral membrane protein [Streptococcus infantis SK1302]
Length = 313
Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 52/239 (21%), Positives = 93/239 (38%), Gaps = 24/239 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMS--CFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+LL + LI R F + +LF FI + Y L
Sbjct: 69 LLLGIVILIFLALVSFRMGGRNELFYTNHFLNILFVFIAYSYFIFGFAFAGFMIYSILYL 128
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
KK + I++ G G + ++ P + RI + + Y K + H II
Sbjct: 129 FIPKKKPYDFIIIHGAGL-----LGGEKVTPLLKR--RIDKAVEAYHQSK--NPHIKIIA 179
Query: 119 SGGDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-I 176
SGG ++E+ N L+ E+ V +D I LE QS T++N +S + + M
Sbjct: 180 SGGQGTDEKISEAQAIANYLVTETDVPQDVIILEYQSRTTYENLLYSKEIGEKMVADPQF 239
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ V++ YH+ R+ Y + + +A +Y+ ++EY+ + +
Sbjct: 240 LFVTNDYHVFRTSTYARKLKMKGDDLGC-----------RTAGYYIPSAFIREYVALCV 287
>gi|182435761|ref|YP_001823480.1| hypothetical protein SGR_1968 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178464277|dbj|BAG18797.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 336
Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 19/182 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +V+LG+G T+P + SR+ ++ + +I SG
Sbjct: 153 RVRRKADFVVVLGSGLVGGSTVPPL-------LASRLKRGQAVHARLSRRGGSPVLITSG 205
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILV 179
G L ES + L+ G I+ E +S +T +N +FS ++++ + ++V
Sbjct: 206 GQGPDEDLPESHAMADHLVAEGFPEHLIEREDRSTNTEENLRFSKAIMEKAKPDYRCVVV 265
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++ YH R+ L + I + S +A ++ L+E+ IL+ Y R
Sbjct: 266 TNNYHAFRAALTARRVRIRGQVVGSP-----------TAAYFWPNATLREFTAILVDYRR 314
Query: 240 GN 241
N
Sbjct: 315 SN 316
>gi|125974276|ref|YP_001038186.1| hypothetical protein Cthe_1772 [Clostridium thermocellum ATCC
27405]
gi|281418329|ref|ZP_06249349.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
gi|125714501|gb|ABN52993.1| protein of unknown function DUF218 [Clostridium thermocellum ATCC
27405]
gi|281409731|gb|EFB39989.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
Length = 262
Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 92/218 (42%), Gaps = 38/218 (17%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+R++FF + L +F G +L+ L F+ + + +V+LG G
Sbjct: 70 LRRLFFGA----LIAFAG----SFVLILGLIFASS----DTDKNVEVDYLVILGAGLKGD 117
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P + R+ + + ++ + ++++GG L E+ L+
Sbjct: 118 RITPTFQY--------RLDKGVEYLRA----NPELKVVVTGGQGPGEDLTEAEAMKRYLV 165
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFG 196
G++ D I +E ++ T +N ++++ ++K + G+ I++V++ +H+ R+++ +H G
Sbjct: 166 SHGIDEDRIIMEDRATSTNENMKYTAEVLKQLTGRSDYRIMIVTNDFHMFRAKILARHNG 225
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + L ++EY ++
Sbjct: 226 FTPYGITAP-----------TNPVVLVNSYIREYFAVV 252
>gi|224825882|ref|ZP_03698986.1| protein of unknown function DUF218 [Lutiella nitroferrum 2002]
gi|224602106|gb|EEG08285.1| protein of unknown function DUF218 [Lutiella nitroferrum 2002]
Length = 267
Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 16/220 (7%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
++ + L + + L + L+ PL++ ++ IV+LG G P
Sbjct: 45 VVVALALGLSYALATPQMAMWLNRSLER---FPLVALSQVRETGAIVVLGGGKKPAPEYG 101
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
R EPS + R+ L + + +++SGG P G AE+ V L+
Sbjct: 102 --RNEPSADTLMRLRYAAYLARHSGR-----PVLVSGGAPLG-GEAEAPVMARTLVSDYG 153
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ +E S TF NA+ S+ ++K ++I LVS +HL R+ F+ G+ +
Sbjct: 154 VQPR-WVEQGSDTTFDNARLSAQLLKADGVRSITLVSQGWHLARAVPLFEEQGLKVLPAP 212
Query: 204 SDYLN----AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + +P T AL+E++G L R
Sbjct: 213 TGLVRYDGGGVMWYLPSGRAMQETHAALREWVGRLYYAVR 252
>gi|163939519|ref|YP_001644403.1| hypothetical protein BcerKBAB4_1530 [Bacillus weihenstephanensis
KBAB4]
gi|163861716|gb|ABY42775.1| protein of unknown function DUF218 [Bacillus weihenstephanensis
KBAB4]
Length = 194
Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + Y ++ I+SGG +
Sbjct: 41 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAE-YLKLHDKTIA---IVSGGQGK 88
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E++ L++ + D I +E +S T +N +FS +I K +I V++ +H
Sbjct: 89 GEDITEALAMKQGLMKQNIAEDRIIMEDKSTSTDENIKFSKPLIPANMKKGMI-VTNDFH 147
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 148 MFRAKKIAAKQGLQLEGLPAK--TPKPIIIPSN---------VREYLAITQYWF 190
>gi|229149917|ref|ZP_04278145.1| hypothetical protein bcere0011_14750 [Bacillus cereus m1550]
gi|228633598|gb|EEK90199.1| hypothetical protein bcere0011_14750 [Bacillus cereus m1550]
Length = 194
Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 41 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKTIA----IVSGGQGK 88
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ L++ + D I +E +S T +N FS +I K +I V++ +H
Sbjct: 89 GEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTNDFH 147
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 148 MFRAKKIAAKQGLQLEGLPAK--TPKPIIIPSN---------VREYLAITQYWF 190
>gi|217969248|ref|YP_002354482.1| hypothetical protein Tmz1t_0817 [Thauera sp. MZ1T]
gi|217506575|gb|ACK53586.1| protein of unknown function DUF218 [Thauera sp. MZ1T]
Length = 259
Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 46/237 (19%), Positives = 89/237 (37%), Gaps = 21/237 (8%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
L + + F + L + + L+ +++ +L ++ IV
Sbjct: 33 GLITLRRRPRLGLAFAWAGVALNLLLIFPPSVGWLVARVEYP---QMLDRARAREAQAIV 89
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G + R+ L + + +++SGG P E
Sbjct: 90 VLGAGKRTHAPEFGGETVNRL-ALERLRYAAALARETR-----LPVLVSGGAPAG-DTPE 142
Query: 131 SIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+ + L E GV +E+ S DT +NA+FS+ ++ K I+LV+ A H++R++
Sbjct: 143 AYLMEALLRDEYGVPPR--WVESASRDTRENARFSAVHLQAAGVKRILLVTHAMHMERAR 200
Query: 190 LYFQHFGINTKASCSDYLNA--------YYSIIPLSANFYLTELALKEYIGILIAYY 238
F+ G++ + + +L P Y AL E +G L +
Sbjct: 201 PEFEAAGLDVIPAPTAWLGGGDSPGDAQPLPFAPSQNTAYAAWFALHELLGRLAYRW 257
>gi|206970731|ref|ZP_03231683.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|206734367|gb|EDZ51537.1| conserved hypothetical protein [Bacillus cereus AH1134]
Length = 192
Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 39 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKTIA----IVSGGQGK 86
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ L++ + D I +E +S T +N FS +I K +I V++ +H
Sbjct: 87 GEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTNDFH 145
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 146 MFRAKKIAAKQGLQLEGLPAK--TPKPIIIPSN---------VREYLAITQYWF 188
>gi|326776386|ref|ZP_08235651.1| protein of unknown function DUF218 [Streptomyces cf. griseus
XylebKG-1]
gi|326656719|gb|EGE41565.1| protein of unknown function DUF218 [Streptomyces cf. griseus
XylebKG-1]
Length = 336
Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 19/182 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +V+LG+G T+P + SR+ ++ + +I SG
Sbjct: 153 RVRRKADFVVVLGSGLVGGSTVPPL-------LASRLKRGQAVHARLSRRGGSPVLITSG 205
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILV 179
G L ES + L+ G I+ E +S +T +N +FS ++++ + ++V
Sbjct: 206 GQGPDEDLPESHAMADHLVAEGFPEHLIEREDRSTNTEENLRFSKAIMEKAKPDYRCVVV 265
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++ YH R+ L + I + S +A ++ L+E+ IL+ Y R
Sbjct: 266 TNNYHAFRAALTARRVRIRGQVVGSP-----------TAAYFWPNATLREFTAILVDYRR 314
Query: 240 GN 241
N
Sbjct: 315 SN 316
>gi|239630407|ref|ZP_04673438.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301067561|ref|YP_003789584.1| hypothetical protein LCAZH_2543 [Lactobacillus casei str. Zhang]
gi|239526690|gb|EEQ65691.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300439968|gb|ADK19734.1| conserved hypothetical protein [Lactobacillus casei str. Zhang]
Length = 352
Score = 128 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 88/239 (36%), Gaps = 29/239 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTI--LLKHLQFSYQRPLLSPQWKK 64
L++ + + F G+ ++ T+ L L RP
Sbjct: 113 LLLIEIAASFGRRFIPDPLYFSLAIFFGLGGFYVLLTLYNFLTVLILYNFRPQPH----- 167
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS-MHCTIIISGGDP 123
+ +++LG G + S SRI ++ Y+ + II SGG
Sbjct: 168 NRTFLIVLGAGLLNGDQV-------SPLLASRIDAAIKFYRKQIKKGRPAPRIIFSGGKG 220
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVS 180
++E++ L G+ D LE QS T +N QFS +I G+ +
Sbjct: 221 SDEAISEAMAMQRYALGKGIPEGDTLLEDQSTTTLENMQFSKRLITQEIGESPYKASFFT 280
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHL R+ ++ + GI ++ ++L ++EY+ +++ Y R
Sbjct: 281 NNYHLFRAGIFARMAGIAANGVGG-----------ATSFYFLPNAVIREYLALVVLYKR 328
>gi|219872211|ref|YP_002476586.1| hypothetical protein HAPS_2205 [Haemophilus parasuis SH0165]
gi|219692415|gb|ACL33638.1| conserved hypothetical protein [Haemophilus parasuis SH0165]
Length = 201
Score = 128 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
LS + K IVLL G + ++ S + R+ Y + Q ++
Sbjct: 24 LSIEDYKSAQAIVLLSGGLRDSKELFG-KLAISEIALERVR-----YAAFLQKETGLPLL 77
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I+G P+ G +E+ V +L + + LE ++ T +NA+FS +++ I
Sbjct: 78 ITGSSPK--GTSEAAVMKKELEQFFHIPTQ--WLEEKAKTTAENAKFSKPILEKEGINKI 133
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKE 229
+LV++ +H++R+++ F+ G + Y + IP S + ALKE
Sbjct: 134 VLVTNQWHMQRARMLFEREGFKILPASVGAGKMPETYGLNVFYFIPQSGALHSNMHALKE 193
Query: 230 YIGILIAYYR 239
+IG Y++
Sbjct: 194 WIG----YWK 199
>gi|315634101|ref|ZP_07889390.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
gi|315477351|gb|EFU68094.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
Length = 247
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 54/242 (22%), Positives = 96/242 (39%), Gaps = 23/242 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ W+F ++ + C+++ ++ ++L + L L L+
Sbjct: 18 ILILWLFSLL-FSFFKCKTLSRLCAF-FGIVLLYLVSIPYTAQTLKDSL---VTEDHLTL 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K IVLLG G + A S + E +R Y + Q ++ISG
Sbjct: 73 NDYKQAQAIVLLGGGVRDSKELYAP-----LASSATQLERLR-YAAYLQKETQLPLLISG 126
Query: 121 GDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G +E V +L V LE +SL T +NA ++ +++ IILV
Sbjct: 127 --VSPTGASEGKVSAEELQTFFNVPTK--WLEEKSLTTKENALYTRQLLEKEGIHKIILV 182
Query: 180 SSAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++ +H++R++L FQ G + + Y +P + LKE+IG
Sbjct: 183 TNEWHMQRAKLLFQQQGFDVLPASVGEGITPDSYGLNMMHFVPQAGAMAKNMQLLKEWIG 242
Query: 233 IL 234
L
Sbjct: 243 YL 244
>gi|302876695|ref|YP_003845328.1| hypothetical protein Clocel_3898 [Clostridium cellulovorans 743B]
gi|302579552|gb|ADL53564.1| protein of unknown function DUF218 [Clostridium cellulovorans 743B]
Length = 257
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 85/206 (41%), Gaps = 18/206 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L + +++ +++L + + F+++F+ L+ ++ S
Sbjct: 40 LILGIVLIVMGFFYLKFDTKLLSYIPKKFLIIFTSFLIIGFSFFLVTE---AFIYKTGSE 96
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG G RI S Q R+ + + II+SG
Sbjct: 97 KDNTPTDYVVVLGAGLI------GDRISTSLQL--RLDAALEFH----SIHPEIPIIVSG 144
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G L+E+ + L+E G++ + I +E +S T++N FS +I N K +
Sbjct: 145 GQGPDELLSEARAMKDYLIEKGIDPNLITMEDKSTSTYENFMFSKELISNKCSKTPIKVT 204
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASC 203
++++ +H R+ + + G
Sbjct: 205 VITNNFHQFRANMIAKAQGFEVHGYP 230
>gi|228964701|ref|ZP_04125808.1| hypothetical protein bthur0004_15450 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228794951|gb|EEM42450.1| hypothetical protein bthur0004_15450 [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 194
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 41 DADYIIVLGS--------KVNGAKPSYSLQYRIDKAAEYLKSHEKTIA----IVSGGQGK 88
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ L++ + D I +E +S T +N FS +I K +I V++ +H
Sbjct: 89 GEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTNDFH 147
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 148 MFRAKKIAAKQGLQLEGLPAK--TPKPIIIPSN---------VREYLAITQYWF 190
>gi|307687370|ref|ZP_07629816.1| hypothetical protein Ccel74_04393 [Clostridium cellulovorans 743B]
Length = 254
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 85/206 (41%), Gaps = 18/206 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L + +++ +++L + + F+++F+ L+ ++ S
Sbjct: 40 LILGIVLIVMGFFYLKFDTKLLSYIPKKFLIIFTSFLIIGFSFFLVTE---AFIYKTGSE 96
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG G RI S Q R+ + + II+SG
Sbjct: 97 KDNTPTDYVVVLGAGLI------GDRISTSLQL--RLDAALEFH----SIHPEIPIIVSG 144
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G L+E+ + L+E G++ + I +E +S T++N FS +I N K +
Sbjct: 145 GQGPDELLSEARAMKDYLIEKGIDPNLITMEDKSTSTYENFMFSKELISNKCSKTPIKVT 204
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASC 203
++++ +H R+ + + G
Sbjct: 205 VITNNFHQFRANMIAKAQGFEVHGYP 230
>gi|295693788|ref|YP_003602398.1| hypothetical protein LCRIS_01926 [Lactobacillus crispatus ST1]
gi|295031894|emb|CBL51373.1| Membrane protein [Lactobacillus crispatus ST1]
Length = 343
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 38/229 (16%), Positives = 87/229 (37%), Gaps = 28/229 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ + + L I ++ + + ++ +++ L
Sbjct: 118 IIFFLFLYPLVGRISHDSWLKYPYIFLWLVIIYLVTIMMMYTLTSWINLINWH---MPHL 174
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G P + +RI + +Y + +I+SGG
Sbjct: 175 DYIVVLGAGIMGTKVTPLL--------AARISRGIEIYH----KNPGSKLIMSGGQGHGD 222
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ E++ + G+ ++DI +E +S T QN QFS +++K +V+S+YH+
Sbjct: 223 DIPEAVAMAEYAEKLGINKNDIIIENKSKTTQQNLQFSHALMKPN--SRFCIVTSSYHVY 280
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
R+ + + G+ + + ++ ++E+I L+
Sbjct: 281 RALVLAKRQGLKCTGYGA-----------KTKWYFTLNAFVREFIAYLV 318
>gi|270157480|ref|ZP_06186137.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|289164131|ref|YP_003454269.1| hypothetical protein LLO_0787 [Legionella longbeachae NSW150]
gi|269989505|gb|EEZ95759.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|288857304|emb|CBJ11131.1| hypothetical protein LLO_0787 [Legionella longbeachae NSW150]
Length = 197
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 18/206 (8%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
FI + I+ + L R KK ++I++LG T + +
Sbjct: 7 VFIFFLILSAGIYFSLALYIIRNAEK-DEKKHADVIIVLG-------TKSYHGDKYNPCL 58
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
+R+ + LYK+ + ++ SGG K+G +E+ V L GV DI LE+
Sbjct: 59 VARVQHAVDLYKA----NYAPKLLFSGGKDTKNGPSEAQVMKEIALHLGVSEQDILLESA 114
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
S T++N FS ++ + +I+LV+ +HL R+ L Q G+ S + +
Sbjct: 115 SASTYENLLFSEKIVSAKKFNSILLVTEPFHLPRAILVAQKLGLKVSGSPAIQSLCWQK- 173
Query: 214 IPLSANFYLTELALKEYIGILIAYYR 239
N Y + L+E + I+ +
Sbjct: 174 -----NSYFSRHFLREPLAIIYYKIK 194
>gi|256003507|ref|ZP_05428497.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|255992531|gb|EEU02623.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|316941425|gb|ADU75459.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
1313]
Length = 262
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 93/220 (42%), Gaps = 42/220 (19%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+R++FF + L +F G +L+ L F+ + + +V+LG G
Sbjct: 70 LRRLFFGA----LIAFAG----SFVLILGLIFASS----DTDKNVEVDYLVILGAGLKGD 117
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P + R+ + + ++ + ++++GG L E+ L+
Sbjct: 118 RITPTFQY--------RLDKGVEYLRA----NPELKVVVTGGQGPGEDLTEAEAMKRYLV 165
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFG 196
G++ D I +E ++ T +N ++++ ++K + G+ I++V++ +H+ R+++ +H G
Sbjct: 166 SHGIDEDRIIMEDRATSTNENMKYTAEVLKQLTGRSDYRIMIVTNDFHMFRAKILARHNG 225
Query: 197 INT--KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++ + L ++EY ++
Sbjct: 226 FTPYGITVPTNPVV-------------LVNSYIREYFAVV 252
>gi|229189814|ref|ZP_04316825.1| hypothetical protein bcere0002_14880 [Bacillus cereus ATCC 10876]
gi|228593622|gb|EEK51430.1| hypothetical protein bcere0002_14880 [Bacillus cereus ATCC 10876]
Length = 194
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 41 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKTIA----IVSGGQGK 88
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ L++ + D I +E +S T +N FS +I K +I V++ +H
Sbjct: 89 GEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTNDFH 147
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + I+P + ++EY+ I ++
Sbjct: 148 MFRAKKIAAKQGLQLEGLPAK--TPKPIIVPSN---------VREYLAITQYWF 190
>gi|312864360|ref|ZP_07724593.1| putative membrane protein [Streptococcus downei F0415]
gi|311100081|gb|EFQ58292.1| putative membrane protein [Streptococcus downei F0415]
Length = 338
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 25/213 (11%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
S L S + +I ILL L +K+ + +++LG+G P +
Sbjct: 128 SLVTGLLSLVTTMVIYLILLISAYTISSFLNLIHWFKRPIDYVLVLGSGLMGDKVTPLL- 186
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
SRI + + +Y+ C +I+SGG + +AE L GV
Sbjct: 187 -------ASRIKKGIEIYQKH----PDCRLILSGGQGKDELIAEGQAMAKYALSQGVPEK 235
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
DI +E +S +T +N QFSS ++ N N+ +V++ YHL R+ L + GI +
Sbjct: 236 DIIIEDRSKNTRENLQFSSHLMANK--ANLAIVTNYYHLFRALLIARDLGIPCIGYGA-- 291
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ ++ ++E+IG L R
Sbjct: 292 ---------KTKFYFSLNAYIREFIGYLYFKCR 315
>gi|310826960|ref|YP_003959317.1| hypothetical protein ELI_1368 [Eubacterium limosum KIST612]
gi|308738694|gb|ADO36354.1| hypothetical protein ELI_1368 [Eubacterium limosum KIST612]
Length = 346
Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats.
Identities = 46/240 (19%), Positives = 95/240 (39%), Gaps = 33/240 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF--FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
ML + I + + + + ++ +L F F+ L + + +P
Sbjct: 107 MLAALILFYTLPFFMNVNPVIPLIYSMLAIVVLFFGFLFISFANASALYY----FNKP-- 160
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTII 117
+ + I++LG P + R+ + Y K + +
Sbjct: 161 ----SYNEDFILILGCRVIDGKVTPLL--------AKRLNRAIAFYEKQMEMTGKKAKFV 208
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NI 176
+SGG ++E++V + LL G + DI +E S +T +N FS ++I ++
Sbjct: 209 VSGGKGMDESVSEALVMKDYLLSKGYHKSDILVEEHSRNTRENMLFSKAIIDRLKPNARG 268
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
I V+S++H+ R+ LY + ++ + +A +Y L+E+IG+L
Sbjct: 269 IFVTSSFHVLRASLYARDAELDFTGVPA-----------KTAFYYFPNAFLREFIGVLSM 317
>gi|116496009|ref|YP_807743.1| hypothetical protein LSEI_2578 [Lactobacillus casei ATCC 334]
gi|191639488|ref|YP_001988654.1| hypothetical protein LCABL_27450 [Lactobacillus casei BL23]
gi|116106159|gb|ABJ71301.1| hypothetical protein LSEI_2578 [Lactobacillus casei ATCC 334]
gi|190713790|emb|CAQ67796.1| Putative uncharacterized protein precursor [Lactobacillus casei
BL23]
gi|327383585|gb|AEA55061.1| Conserved domain protein [Lactobacillus casei LC2W]
gi|327386777|gb|AEA58251.1| Conserved domain protein [Lactobacillus casei BD-II]
Length = 352
Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 88/239 (36%), Gaps = 29/239 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTI--LLKHLQFSYQRPLLSPQWKK 64
L++ + + F G+ ++ T+ L L RP
Sbjct: 113 LLLIEIAASFGRRFIPDPLYFSLAIFFGLGGFYVLLTLYNFLTVLILYNFRPQPH----- 167
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS-MHCTIIISGGDP 123
+ +++LG G + S SRI ++ Y+ + II SGG
Sbjct: 168 NRTFLIVLGAGLLHGDQV-------SPLLASRIDAAIKFYRKQIKKGRPAPRIIFSGGKG 220
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVS 180
++E++ L G+ D LE QS T +N QFS +I G+ +
Sbjct: 221 SDEAISEAMAMQRYALGKGIPEGDTLLEDQSTTTLENMQFSKRLITQEIGESPYKASFFT 280
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHL R+ ++ + GI ++ ++L ++EY+ +++ Y R
Sbjct: 281 NNYHLFRAGIFARMAGIAANGVGG-----------ATSFYFLPNAVIREYLALVVLYKR 328
>gi|229824214|ref|ZP_04450283.1| hypothetical protein GCWU000282_01518 [Catonella morbi ATCC 51271]
gi|229786568|gb|EEP22682.1| hypothetical protein GCWU000282_01518 [Catonella morbi ATCC 51271]
Length = 341
Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats.
Identities = 50/239 (20%), Positives = 99/239 (41%), Gaps = 25/239 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML + + W +L + + + F +++ +G I +L + F
Sbjct: 104 MLAFGMIGYMVIWPILANRLSLNWPI--FNVIYGLMGSTIFYFAVLVGIFFVTNILNFIH 161
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K + IV+LG G P + SRI + ++L++ Q T+I+SG
Sbjct: 162 FVKPRYSYIVVLGAGLNGTEVTPLL--------ASRIDKAIKLWRRRPQ---DVTLIMSG 210
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++E L GV + I ++ QS +T +N FS +++ ++ ++V+
Sbjct: 211 GQGPDEVISEGEAMKAYALRQGVPQSAILVDNQSRNTHENLLFSYKLMEK-GREDFVIVT 269
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHL RS + + G+ + + + ++ L+E+IG L +R
Sbjct: 270 NYYHLLRSLILARRLGLKCQGYGA-----------KTKLYFSINAFLREFIGYLTLAWR 317
>gi|168181584|ref|ZP_02616248.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|237796355|ref|YP_002863907.1| hypothetical protein CLJ_B3154 [Clostridium botulinum Ba4 str. 657]
gi|182675224|gb|EDT87185.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|229261607|gb|ACQ52640.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
Length = 197
Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG P ++ R+ E +RLY II+SG
Sbjct: 39 QPQKSDSIIILGCKVKGNNPTPFLKR--------RLDEGLRLYNEGYGKY----IIVSGA 86
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++E+ L++ GV++ I LE +S +T +N +FS +++ + I+VS+
Sbjct: 87 KGPGENISEAEAMQKYLVQKGVDKKFIILEDKSRNTLENIKFSKKKMEDNNLSSSIIVSN 146
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHLKR++L Q GI S ++ ++ S + L+E +L+ Y +
Sbjct: 147 KYHLKRAELLCQKEGIKASYSGV-FVRSHMS--------HEIMGFLREIPALLVYYIK 195
>gi|225377113|ref|ZP_03754334.1| hypothetical protein ROSEINA2194_02758 [Roseburia inulinivorans DSM
16841]
gi|225211018|gb|EEG93372.1| hypothetical protein ROSEINA2194_02758 [Roseburia inulinivorans DSM
16841]
Length = 249
Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 91/227 (40%), Gaps = 38/227 (16%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
L + W + Q +R IF + C + SF+ + + Q +K+
Sbjct: 50 LLHMGMWDRIPQIVRWIFGILCGIFFLSFLVIEGMVIHQM------------HAQGEKNL 97
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ +++LG PS R+ E + LY + I++GG +
Sbjct: 98 DYVIVLGAQVHADK--------PSVVLKYRLDEAI-LYL---NENPETVCIVAGGQGKNE 145
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+E+ L+++G+++D I LE QS T +N ++S + G + ++++ +H+
Sbjct: 146 PYSEAYGMAQYLMQNGIDKDRILLEDQSKTTEENLRYSRKFLPE--GAKVGIITNDFHMF 203
Query: 187 RSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
R+ + G+ + +D S FYL L+EY
Sbjct: 204 RALQIAKKQGLSDVCGIAAD-----------STKFYLPNNMLREYFA 239
>gi|228920427|ref|ZP_04083772.1| hypothetical protein bthur0011_14410 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228839057|gb|EEM84353.1| hypothetical protein bthur0011_14410 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 194
Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 41 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKTIA----IVSGGQGK 88
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ L++ + D I +E +S T +N FS +I K +I V++ +H
Sbjct: 89 GEDISEALAMKQGLIKQNIVEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTNDFH 147
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 148 MFRAKKIAAKQGLQLEGLPAK--TPKPIIIPSN---------VREYLAITQYWF 190
>gi|312892082|ref|ZP_07751582.1| protein of unknown function DUF218 [Mucilaginibacter paludis DSM
18603]
gi|311295454|gb|EFQ72623.1| protein of unknown function DUF218 [Mucilaginibacter paludis DSM
18603]
Length = 260
Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats.
Identities = 53/248 (21%), Positives = 92/248 (37%), Gaps = 29/248 (11%)
Query: 5 WIFLIVSYWHLLCQ---SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
WIFL++ + R F + +FS +L + P
Sbjct: 18 WIFLLLLTGFFVKNIILKKRLFFAAFALLFIFS-------NQFILSRFAKMWDITQGPPP 70
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IVL G + S R +T++L K I++SGG
Sbjct: 71 EGKYSCAIVL--GGFSSADQDGNGYFNGS---ADRFIKTLQL----KVTGRVPLILMSGG 121
Query: 122 DPQKHGLA---ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNII 177
+ Q + E+ ++ + I +E QS +T +NA F+ ++ +
Sbjct: 122 NGQLIKTSNLKEADYVFSQFKAFNIPDSCIMIENQSRNTLENAMFTKRILIDKKVPGPYL 181
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYI 231
LV+SA+H++RS F+ GIN D++ + IIP + +KE +
Sbjct: 182 LVTSAFHMRRSAYIFKKIGINVTPYPCDFIAGKSAVSLSDFIIPDPLALAQWNIYIKEVV 241
Query: 232 GILIAYYR 239
G + Y +
Sbjct: 242 GFVAYYLK 249
>gi|121534257|ref|ZP_01666081.1| protein of unknown function DUF218 [Thermosinus carboxydivorans
Nor1]
gi|121307027|gb|EAX47945.1| protein of unknown function DUF218 [Thermosinus carboxydivorans
Nor1]
Length = 192
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 23/178 (12%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ G++I++LG I EPS R+ E +LY++ II+SG
Sbjct: 35 PEPGDVIIVLGA--------KLIGHEPSTMLRLRLDEAAKLYQA----GYAPFIIVSGAQ 82
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ N L+ GV D I LE +S +T QN S ++++ + I+VS+A
Sbjct: 83 GCDEVISEAAAMRNYLIAHGVPADRILLEDKSFNTQQNLANSLAIMREHGLQRAIIVSNA 142
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE-LALKEYIGILIAYYR 239
H++R+ + + G+ + + P++ N YLT ++E +L ++
Sbjct: 143 SHIRRALVIAHNLGMEASGAPA----------PMANNAYLTTKQYVREGAAMLALVFK 190
>gi|15602371|ref|NP_245443.1| hypothetical protein PM0506 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720766|gb|AAK02590.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 247
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 92/230 (40%), Gaps = 26/230 (11%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + ++ + +L+ F +P K LS + IVLLG G
Sbjct: 34 KKLSRLCALLGLTILYIF----SLPYTSHKIEDSLVIEDKLSLADYQQAQAIVLLGGGLR 89
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ ++ S R+ L K ++I+G P+ G++E+ + N+
Sbjct: 90 DSKELY-DKLTVSAIPLERVRYAAYLQKQ-----TQLPLLITGSSPK--GISEAQIMANE 141
Query: 138 L-LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L V +E ++ T +NA FS +++ K +I+V++ +H++R++L F+ G
Sbjct: 142 LNTFFSVPTT--WVEGKARTTKENALFSREILEKEGIKRVIVVTNQWHMQRAKLLFEQQG 199
Query: 197 INTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ Y IP + L LKE++G Y++
Sbjct: 200 FEVLPASVGHGISPQSYGLNVMYFIPQAGALNKNMLLLKEWLG----YWK 245
>gi|326939331|gb|AEA15227.1| putative cytoplasmic protein [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 192
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 75/175 (42%), Gaps = 24/175 (13%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+D I++LG+ +PS+ RI + KS ++ I+SGG
Sbjct: 38 EDAEYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKTIA----IVSGGQG 85
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ ++E++ L++ + D I +E +S T +N FS +I K +I V++ +
Sbjct: 86 KGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTNDF 144
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 145 HMFRAKKIAAKQGLQLEGLPAK--TPRPIIIPSN---------VREYLAITQYWF 188
>gi|228938827|ref|ZP_04101427.1| hypothetical protein bthur0008_14880 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228971708|ref|ZP_04132329.1| hypothetical protein bthur0003_14850 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228978317|ref|ZP_04138694.1| hypothetical protein bthur0002_15210 [Bacillus thuringiensis Bt407]
gi|228781334|gb|EEM29535.1| hypothetical protein bthur0002_15210 [Bacillus thuringiensis Bt407]
gi|228787798|gb|EEM35756.1| hypothetical protein bthur0003_14850 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228820676|gb|EEM66701.1| hypothetical protein bthur0008_14880 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 194
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 75/175 (42%), Gaps = 24/175 (13%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+D I++LG+ +PS+ RI + KS ++ I+SGG
Sbjct: 40 EDAEYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKTIA----IVSGGQG 87
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ ++E++ L++ + D I +E +S T +N FS +I K +I V++ +
Sbjct: 88 KGEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTNDF 146
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 147 HMFRAKKIAAKQGLQLEGLPAK--TPRPIIIPSN---------VREYLAITQYWF 190
>gi|299822206|ref|ZP_07054092.1| conserved domain protein [Listeria grayi DSM 20601]
gi|299815735|gb|EFI82973.1| conserved domain protein [Listeria grayi DSM 20601]
Length = 348
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + + +++LG+G I R+ P + RI + + YK+ I+ SG
Sbjct: 164 KKPRQPDFLIVLGSGL-----IGGNRVPPLLAA--RIDKAIAFYKA--SVGARPQIVFSG 214
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILV 179
G ++E+ + G+ D +E S T++N +FS+ ++ N + I
Sbjct: 215 GKGADETISEAEAMQQYAIAKGIPEQDTLVEKNSRTTYENMRFSAEIMANRKTNYEAIFF 274
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++ YH+ R+ ++ + G+ + +A ++L L+E+I IL + +
Sbjct: 275 TNNYHVLRAGMFARKAGLAINGIGA-----------KTAFYFLPNAFLREWIAILSMHKK 323
>gi|42519211|ref|NP_965141.1| hypothetical protein LJ1286 [Lactobacillus johnsonii NCC 533]
gi|41583499|gb|AAS09107.1| hypothetical protein LJ_1286 [Lactobacillus johnsonii NCC 533]
Length = 346
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 82/208 (39%), Gaps = 25/208 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
++ FI II I + + L K + +V+LG G P +
Sbjct: 140 IYLFINLVIIYLIFIMMMYTLTSWINLVNIKTKKLDYVVVLGAGLMGKKVTPLL------ 193
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
+RI + +Y+ + II+SGG + E++ E GV + DI +E
Sbjct: 194 --AARINRGIEVYR----RNPGSKIIMSGGQGPGEEIPEAVAMAKYAEEKGVPKQDIIVE 247
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
+S T +N FS ++K +V+++YH+ R+ + + G+ +
Sbjct: 248 DKSKTTRENLIFSHKLMK--PDSRFAIVTNSYHVYRALVLAKRLGLQCIGYGA------- 298
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYR 239
+ ++ ++E+I L +R
Sbjct: 299 ----KTKWYFTLNAFVREFIAYLTITWR 322
>gi|223042665|ref|ZP_03612714.1| membrane protein [Staphylococcus capitis SK14]
gi|222444328|gb|EEE50424.1| membrane protein [Staphylococcus capitis SK14]
Length = 320
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 50/264 (18%), Positives = 107/264 (40%), Gaps = 48/264 (18%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWG------------IIPTILLKH 48
ML++ +F+++ + HL ++F F+ L+ + + II + L
Sbjct: 58 MLIASLFILIKHRHLFNFKRGRLFLKHMFIYLYRIMLFLSACIYISTVDIPIINGLALWF 117
Query: 49 LQFSYQRPLL------------SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
+Y S + K+ ++I++LG G P + R
Sbjct: 118 ATIAYSTIFAFICYISWSSAYGSHLFSKNVDLIMVLGAGIFTEEVTPML--------AER 169
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ +++Y+S K +++SGG + E++ L+ GV I +E QS +
Sbjct: 170 LNCAIKVYESQKHSPY---MLVSGGQGPDEPITEALAMKRYLIAKGVPEKRILMEEQSTN 226
Query: 157 TFQNAQFSSSMIKNMQGKN--IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
T+ N Q+S +I+ G+ + V+S +H+ RS G+ +Y +
Sbjct: 227 TYTNFQYSKPIIEKHFGRRAQFLCVTSQFHILRSLRLANKVGLE-----------FYGLG 275
Query: 215 PLSANFYLTELALKEYIGILIAYY 238
+ + + +K+++G++ Y
Sbjct: 276 SHTPYHFFSIALIKDFLGLMYQYK 299
>gi|149194221|ref|ZP_01871318.1| hypothetical protein CMTB2_06466 [Caminibacter mediatlanticus TB-2]
gi|149135396|gb|EDM23875.1| hypothetical protein CMTB2_06466 [Caminibacter mediatlanticus TB-2]
Length = 242
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 23/245 (9%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L IF+I+ + KI F + L+ + + +LL L+ + ++P
Sbjct: 14 LPPGIFIIILLIATIFAKRFKILFFISALTLY-LLSIQPVSNMLLNPLENFKHKDNITPS 72
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+V+LG G+ TI A ++ R + L K+ + + SGG
Sbjct: 73 ------AVVVLGGGSNPKDTIKAF-----PDAFKREVYGLILAKTY-----NIPFVFSGG 116
Query: 122 DPQKHGLAESIVYNNKLLESGVERD-DIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILV 179
K AE+ ++ +LL + + E +SL+T QN +++ + K ++ NI LV
Sbjct: 117 GIGKISEAENTKHDVQLLTKTFDVNITTYFEDKSLNTIQNGMYTALLFKKLKLPKNIYLV 176
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGILI 235
++AYH+KRS F+ FG + + + + P + + A+ EY G+L
Sbjct: 177 TNAYHMKRSYKIFKFFGFKIITKPVGFYSKPIESIWDYFPKMNSLNASYKAIHEYFGLLS 236
Query: 236 AYYRG 240
+G
Sbjct: 237 LKIKG 241
>gi|307267183|ref|ZP_07548690.1| protein of unknown function DUF218 [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306917799|gb|EFN48066.1| protein of unknown function DUF218 [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 191
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 29/218 (13%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K+ ++LL FI GII + + + F+Y + K ++I++LG
Sbjct: 2 KMILKIVWLLLVLFIIIGII--LEWQIISFAYN------EKPKKSDVIIVLGCAVYGD-- 51
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
PS +R+ E +RLY II+SGG ++E+ LL+
Sbjct: 52 ------IPSPFFKARLEEALRLYNEGYGRY----IIVSGGKGPGENISEAEAGKGYLLKK 101
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ I ++ +S T++N QFS ++ K +++S+ +HLKR+ + + GI
Sbjct: 102 GIPEKAILIDDKSFSTYENLQFSKEIMDKKSLKRAVIISNKFHLKRASVIAKRVGIEASF 161
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S I L+E + + Y +
Sbjct: 162 SGVFVRRYINEEIYG---------FLREVVALWYIYLK 190
>gi|195953339|ref|YP_002121629.1| protein of unknown function DUF218 [Hydrogenobaculum sp. Y04AAS1]
gi|195932951|gb|ACG57651.1| protein of unknown function DUF218 [Hydrogenobaculum sp. Y04AAS1]
Length = 244
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 28/227 (12%)
Query: 19 SIRKIFFMSCFM-LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+KI +S M +L + + L+ L+ +Y +P + + N IV+LG G
Sbjct: 32 RNKKIKILSFGMTILLYLLSITPVKDALITPLERTYSQP----KGFLNANAIVVLGGGYY 87
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ S ++ R+ + L + +I+SG D + IV
Sbjct: 88 KNGNL-------SGETVKRLLAGVYL-----SYKTKIPLILSGIDIKYLPKNTPIVK--- 132
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNIILVSSAYHLKRSQLYFQH 194
L + ++ +I + +S DT QNA S + +IILV+SAYH+ R+++ F
Sbjct: 133 -LINAIDIGNIYEDVKSKDTMQNAAQSYKVCTRYITPDCNSIILVTSAYHMPRAKMLFDR 191
Query: 195 FGINTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGILIAY 237
F N DY S +P ++ + A++EY+GIL +
Sbjct: 192 FFKNVIPYPVDYKEDLRYNVRSFLPNMSDLENSTKAIREYLGILYYF 238
>gi|294499692|ref|YP_003563392.1| hypothetical protein BMQ_2936 [Bacillus megaterium QM B1551]
gi|294349629|gb|ADE69958.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 187
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 86/208 (41%), Gaps = 28/208 (13%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
++++FIG ++ +++ + + + +++LG+ + ++ PS
Sbjct: 5 MIYTFIGSLVLYIVIISFCMYQ----TAHKSVPHNADYVLVLGS------KVDGDQMSPS 54
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
+ E ++ S Q +I++GG ++E+ L + G++++ I
Sbjct: 55 ------LKERVKTALSYLQAHQQTKVIVTGGKGSDEEISEAEAAYRFLRKEGIKKNRIIK 108
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E QS TF+N F+ + K ++LVS+ +HL R+ + + G + +
Sbjct: 109 EDQSTSTFENFTFTKQKVDIQH-KKVVLVSNDFHLFRASIIAKRQGFDVYPLGAK----- 162
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYY 238
P S + +EY IL +
Sbjct: 163 ---TPNSIKL---QAYFREYAAILKTWL 184
>gi|315612721|ref|ZP_07887632.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
gi|315314831|gb|EFU62872.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
Length = 340
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 24/236 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ + F+I++ + + + + F + I L Y L
Sbjct: 101 VILFFFVIMAIRVSDTKGLFYTNHLVNIIFFFLIYSYLIFGFAFAGFL--LYSILYLFIP 158
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
KK + I++ G G + ++ P +S RI + + Y + + II SGG
Sbjct: 159 KKKYYDFIIIHGAGL-----LNGEKVTPLLKS--RIDKAVEAYHQ--SLNPNVKIISSGG 209
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILV 179
++E+ N LLE V R+ I LE S T++N FS M + + + V
Sbjct: 210 QGGDEKISEAQAICNYLLEETDVPREAILLEEDSTTTYENLLFSKEMGEKLVASPRFLFV 269
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YH+ R+ Y + G+ +A +Y+ ++EYI + +
Sbjct: 270 TNDYHVFRTSTYARRIGMKGDGLGC-----------RTAAYYIPSAFIREYIALCV 314
>gi|242372011|ref|ZP_04817585.1| membrane protein [Staphylococcus epidermidis M23864:W1]
gi|242350280|gb|EES41881.1| membrane protein [Staphylococcus epidermidis M23864:W1]
Length = 263
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 43/235 (18%), Positives = 93/235 (39%), Gaps = 31/235 (13%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+FLI ++ I ++ L S I + + S+ S + K+
Sbjct: 37 LFLIACFYISTVS----IPVINGLALWLSAIAFSTFFAFICY---VSWSSAFGSHSFHKN 89
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
++I++LG G P + R+ + +Y S + ++SGG
Sbjct: 90 VDLIMVLGAGIFTEQVTPML--------AERLNRAINVYHSQAKPVY---FLVSGGQGLD 138
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAY 183
+ E++ L+ G+ D I +E QS +T+ N +S +I+ + ++ V+S +
Sbjct: 139 EPITEALAMKRYLIAKGIPEDIILMENQSTNTYTNFLYSKPIIETHFKRQSQLLCVTSQF 198
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H+ RS + G+ + S + + + +K+++G++ Y
Sbjct: 199 HILRSLRLAEKLGLKFEGIGSH-----------TPYHFFSRALIKDFLGVMYQYR 242
>gi|70725701|ref|YP_252615.1| hypothetical protein SH0700 [Staphylococcus haemolyticus JCSC1435]
gi|68446425|dbj|BAE04009.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 318
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/251 (18%), Positives = 99/251 (39%), Gaps = 41/251 (16%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPT----ILLKH-----------LQ 50
+F + + L + + + F + +++ IP L L
Sbjct: 72 LFSLQKGLNFLSKMTKHLILGVLFTSILAYLSTMPIPIINGGFLWLTMIAISTCYALLLY 131
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
S+ L K ++I++LG G P + R+ + +Y+
Sbjct: 132 MSWSSALGRISTHKQYDLIMVLGAGIFTEKVTPML--------AERLNRALSVYQHQTDK 183
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
C II+SGG ++E++ L++ GV + I +E+QS +TF+N +S +I N
Sbjct: 184 ---CKIIVSGGQGPDEPISEALAMQRYLIQHGVPQSSIIMESQSTNTFENFYYSKKVIHN 240
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL- 227
+ NI+ V+S +H+ R + + S +++ ++AL
Sbjct: 241 LYSNSPNILCVTSQFHILRGMKFAHTNRMKVDGIGSH------------THYHFFDVALV 288
Query: 228 KEYIGILIAYY 238
++++ ++ Y
Sbjct: 289 RDFLALMYQYK 299
>gi|332798404|ref|YP_004459903.1| hypothetical protein TepRe1_0394 [Tepidanaerobacter sp. Re1]
gi|332696139|gb|AEE90596.1| protein of unknown function DUF218 [Tepidanaerobacter sp. Re1]
Length = 193
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 91/222 (40%), Gaps = 35/222 (15%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
++++ F+ F+LLFSF+ + + S+ + + +++LG G
Sbjct: 2 LKRLLFIIVFVLLFSFLIIESLIIV------NSFSNDDM------PVDYMIILGAGLYGD 49
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P++R R+ + + I++SGG ++E+ L+
Sbjct: 50 EPSPSLRY--------RLQQALEYANKY----PQVPIVVSGGQGSNEWISEAEAMQRFLV 97
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIK---NMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ G++ + I E S +T +N F+ +IK + +++V+S YH+ RS+ + +G
Sbjct: 98 KHGIKEERIIKEDCSTNTGENLLFAREVIKYTGKAERPKVMIVTSEYHMFRSKFLARRYG 157
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
C+ P + ++EY ++ ++
Sbjct: 158 FIPYGICAP--------TPAYPRYLKPLYYIREYFAVIKSFL 191
>gi|258455282|ref|ZP_05703242.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|257862493|gb|EEV85261.1| conserved hypothetical protein [Staphylococcus aureus A5937]
Length = 322
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 81/182 (44%), Gaps = 24/182 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ K+ +II++LG G P + +R+ + +Y+ + II+
Sbjct: 140 HRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQASAT---KIIV 188
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNI 176
SGG ++E + L+ GV++ DI +E+ S++T+ N +S +I N + I
Sbjct: 189 SGGQGPDEPISEVLAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKI 248
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ V+S +H+ R+ Q G++ S + + + +K+Y+G++
Sbjct: 249 VCVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQ 297
Query: 237 YY 238
Y
Sbjct: 298 YR 299
>gi|299066425|emb|CBJ37610.1| conserved exported protein of unknown function [Ralstonia
solanacearum CMR15]
Length = 265
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 97/248 (39%), Gaps = 17/248 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L L + + + R ++ L+ +++ LL L
Sbjct: 21 PLVLALLAGTVAWRVPRWRRPAGWVLGIALIVAWVAATPWCGRLLASWTHPAPPLRLDAL 80
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIE--PSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ +VLLG + A + S S R +Y + + H ++ +
Sbjct: 81 QPQGEGAVVLLGGARKLAAREYAGQGATALSGPSLER-----TVYAARLARAAHLPVLAT 135
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG P+ +G+ E+ + + + G +D +ET+S T +NA FS+ M++ + I LV
Sbjct: 136 GGAPEGNGVPEAELMRRLVADMG--QDARWIETRSATTEENAAFSAPMLRAAGIRRIYLV 193
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDY--------LNAYYSIIPLSANFYLTELALKEYI 231
+ +H+ R++ YF+ G + + S++P + LT AL+E +
Sbjct: 194 THYWHMARARRYFEGQGFTVTPAPCGWGGEVEESPAGGILSLLPRTDGLMLTRFALREAL 253
Query: 232 GILIAYYR 239
G R
Sbjct: 254 GQWWLSIR 261
>gi|283458819|ref|YP_003363461.1| hypothetical protein RMDY18_18090 [Rothia mucilaginosa DY-18]
gi|283134876|dbj|BAI65641.1| uncharacterized conserved protein [Rothia mucilaginosa DY-18]
Length = 385
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/241 (17%), Positives = 95/241 (39%), Gaps = 28/241 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L + + LIV + + F + F F ++ + + F+ L
Sbjct: 135 LAAGVALIVGPFFVPGSVENVPFGGVWGTIYFYF--SLVLTYFTIYAVGFTVAAALNLVN 192
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+++ + +V+LG+G P + RI + +Y+ + +I+SGG
Sbjct: 193 FRQQADYVVVLGSGLIGDQVTPLL--------AGRIDRGIEIYR----KNPGSKLIMSGG 240
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNIIL 178
+ E + + G+ DI +E ++++T +N FS +++ + + +
Sbjct: 241 QGADEEVPEGVAMTRYAVSRGIPEADIIVEDRAVNTRENLLFSYALMPEVAEGKTPKVAV 300
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+++YHL R+ L + G+ + + ++ ++E+IG L
Sbjct: 301 VTTSYHLFRALLLARSLGLECWGVGA-----------RTKVYFAVNAFIREFIGYLSMTR 349
Query: 239 R 239
R
Sbjct: 350 R 350
>gi|315652448|ref|ZP_07905435.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315485286|gb|EFU75681.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 365
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 99/248 (39%), Gaps = 34/248 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIF---------FMSCFMLLFSFIGWGIIPTI-LLKHLQF 51
+LS F I ++ + ++ + L++ + + I + L+
Sbjct: 106 ILSLAFSISLVIYIFVWPLFRLKSLTNVYEKPLLLIADLVYKMLSFIFIYLLFLMAMYCI 165
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
S L+ K + I++LG G P + RI + + L K ++
Sbjct: 166 SAILNLIHIGRNKKLDYIIVLGAGIKGKRVTPLL--------AGRIDKGIELLK----YN 213
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
+ +I+SGG + E + + + GV + I +E +S +T +N FS +I N
Sbjct: 214 PNAKLILSGGMGPGEDIPEGVAMADYAKQKGVSDEKIIIEDKSKNTKENLLFSYKLIDNK 273
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
K I +V+++YH+ R+ ++ + I S + ++ ++EYI
Sbjct: 274 NSK-IAIVTTSYHVFRALVFAKKLNIPCIGYGS-----------KTKWYFTLNALIREYI 321
Query: 232 GILIAYYR 239
G L YR
Sbjct: 322 GYLSISYR 329
>gi|218235669|ref|YP_002366399.1| hypothetical protein BCB4264_A1680 [Bacillus cereus B4264]
gi|218163626|gb|ACK63618.1| conserved hypothetical protein [Bacillus cereus B4264]
Length = 192
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ T S+ RI + KS ++ I+SGG +
Sbjct: 39 DADYIIVLGSKVNGTKT--------SYSLQYRIDKAAEYLKSHEKTIA----IVSGGQGK 86
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ L++ + D I +E +S T +N FS +I K +I V++ +H
Sbjct: 87 GEDISEALAMKQGLIKQNIAEDRIIMEDKSTSTDENITFSKPLIPADMKKGMI-VTNDFH 145
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 146 MFRAKKIAAKQGLQLEGLPAK--TPKPIIIPSN---------IREYLAITQYWF 188
>gi|168179334|ref|ZP_02613998.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|226950331|ref|YP_002805422.1| hypothetical protein CLM_3296 [Clostridium botulinum A2 str. Kyoto]
gi|182669557|gb|EDT81533.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|226841604|gb|ACO84270.1| conserved hypothetical protein [Clostridium botulinum A2 str.
Kyoto]
Length = 198
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG P ++ R+ E +RLY II+SG
Sbjct: 39 QPQKSDSIIILGCKVKGNDPTPFLKR--------RLDEGLRLYNEGYGKY----IIVSGA 86
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++E+ L++ G+++ I LE +S +T +N +FS +++ + I+VS+
Sbjct: 87 KGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLENIKFSKKKMEDNNLSSSIIVSN 146
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHLKR++L Q GI S ++ ++ S + L+E +L+ Y +
Sbjct: 147 KYHLKRAELLCQKEGIKASYSGV-FVRSHMS--------HEIMGFLREIPALLVYYIK 195
>gi|315604221|ref|ZP_07879287.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313927|gb|EFU61978.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 330
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 86/241 (35%), Gaps = 26/241 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ L + IV+++ L + + + G L Y S
Sbjct: 92 LPLLFACAIVAWFGALPVAHAARLPGVVVGFVLAVTACGA-WFFLSFAAMLLYSWLYRSL 150
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ + I++ G G P + R+ L+ + T++ SG
Sbjct: 151 PRRRRYDFIIIHGAGLKGKELTPLL--------AGRVERACELWNAQ---GRRATLVPSG 199
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNII 177
G + ++E+ L GV I LE +S T++N FS +I
Sbjct: 200 GQGEDEEISEAEAMARHLRALGVPASQIALEDRSTTTWENLSFSRDLIAERSSVPDPRSA 259
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
LV+S YH+ R+ +Y + G+N S +A +Y ++E+I I Y
Sbjct: 260 LVTSDYHVFRAAMYARAVGLNADGLGS-----------RTARYYFPTAFIREFIAISRRY 308
Query: 238 Y 238
+
Sbjct: 309 W 309
>gi|256390075|ref|YP_003111639.1| hypothetical protein Caci_0865 [Catenulispora acidiphila DSM 44928]
gi|256356301|gb|ACU69798.1| protein of unknown function DUF218 [Catenulispora acidiphila DSM
44928]
Length = 350
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 67 NIIVLLGNGT---TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ +V+LG G + + A R+E Y + L ++ +I+SGG
Sbjct: 168 DFVVILGAGLMGGRRVSPLLASRLERGRAVYESLSA---LAQNSGDTQRVPMLIVSGGKG 224
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSS 181
L+E+ N L+E+G D I E QS T +N +S+++++ + + ++V++
Sbjct: 225 SDERLSEAEAMENYLVEAGFPADRILKEDQSSTTEENLLYSAALMRENRPEGYRCVVVTN 284
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+H R+ L + + + S +A ++L ++E+I + + Y++ N
Sbjct: 285 DFHSYRAALIARDLDVPAQVVGSP-----------TAAYFLPSATIREFIAVFVRYWKWN 333
>gi|228474816|ref|ZP_04059547.1| putative membrane protein [Staphylococcus hominis SK119]
gi|228271479|gb|EEK12847.1| putative membrane protein [Staphylococcus hominis SK119]
Length = 318
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 49/250 (19%), Positives = 100/250 (40%), Gaps = 39/250 (15%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS------------- 52
+F I L + R++ F+ +F ++ +P + L +
Sbjct: 72 LFKIKKGTCFLNKMFRRLINGVLFIGIFIYLSTIPLPILNGMFLWIALILFSACYAFIIY 131
Query: 53 --YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
+ + K ++I++LG G P + SR+ + +YK
Sbjct: 132 LIFSSAFERAKTHKQYDMILILGAGIFNETVTPML--------ASRLDRALEIYK---VQ 180
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
S +C I++SGG ++E++ N L++ GV I +E+QS T++N +S S I
Sbjct: 181 SHNCNILVSGGQGPDEPISEALAMKNYLIKCGVSSSSILMESQSSSTYENFLYSKSFINT 240
Query: 171 --MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
+I+ V+S +H+ R+ + Q I S + +L + L+
Sbjct: 241 SFENVPSILCVTSQFHILRALRFAQKLNIKVIGLGS-----------STPYHFLDKALLR 289
Query: 229 EYIGILIAYY 238
+++ ++ Y
Sbjct: 290 DFLALIYQYK 299
>gi|253681527|ref|ZP_04862324.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
gi|253561239|gb|EES90691.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
Length = 255
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 75/178 (42%), Gaps = 26/178 (14%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P+ + I++LG S R+ T+ K + II+S
Sbjct: 92 PKPADEKKYIIVLGAAVHGD--------YMSLILKKRMDATLDYLKKY----PNTKIIVS 139
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---I 176
GG + E+ L+++GV + I E +S T +N ++S ++K + +N +
Sbjct: 140 GGKGPGELITEAEAMKRYLVKNGVNNNQIIKEEKSRSTGENFKYSLEILKQREKENIPSV 199
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+V++ +H+ R++ + GIN A S + + N+Y L+EY ++
Sbjct: 200 CVVTTDFHMFRAEFLAKRIGINVCAVPSK------GYLSSAPNYY-----LREYFAVI 246
>gi|171059605|ref|YP_001791954.1| hypothetical protein Lcho_2924 [Leptothrix cholodnii SP-6]
gi|170777050|gb|ACB35189.1| protein of unknown function DUF218 [Leptothrix cholodnii SP-6]
Length = 271
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 92/250 (36%), Gaps = 29/250 (11%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL-------- 57
+ LI+ LL + R + + + L + W + T+ LQ + RP
Sbjct: 29 LLLIIGPALLLQRRHRA--WAATVIGLCCALLWLLSCTVTAHWLQERWLRPPPALGSQQR 86
Query: 58 --LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
L + IV+LG G R + Q+ R+ + L +
Sbjct: 87 SQLHAGPDQVPTAIVVLGAGLHKRAPEYGDRPTLTQQAMVRLRYGVWLARQ-----TGLP 141
Query: 116 IIISGGDP--QKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+ SGG Q G +E+ E+G+ LE S DT +NA + +M++
Sbjct: 142 LAYSGGRGWAQGDGPSEAETAAQIARDEAGIAMK--WLEHDSRDTRENASGTVAMLRAAG 199
Query: 173 GKNIILVSSAYHLKRSQLYF-QHFG--INTKASCSDYLNA----YYSIIPLSANFYLTEL 225
+ I+LV+ A H+ R+ F + G I + Y +P + F
Sbjct: 200 VRRIVLVTHASHMPRALRAFNEAAGSDIACLPAAVAYTTQDDLEVLDWLPSAQGFQQVHA 259
Query: 226 ALKEYIGILI 235
L E IG+L
Sbjct: 260 LLHELIGLLA 269
>gi|294340205|emb|CAZ88577.1| conserved hypothetical protein; putative exported protein
[Thiomonas sp. 3As]
Length = 252
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 46/239 (19%), Positives = 82/239 (34%), Gaps = 12/239 (5%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+FL + + + F +LF + + L L+
Sbjct: 18 GLVFLSLFVTWRSHRFFTR-FLTYAITVLFLLASMPLFANLALGALERK-ATQEKICSPP 75
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
G + V+L G P S R+ ++L + + T++ISGG
Sbjct: 76 PPGTLFVVLAGGIDGNPMHAQDFSALKTASLKRLLAAVQLAQ----RTPDSTLLISGG-- 129
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ E+ + ++ G + L+T S TFQ A + I LV+SA
Sbjct: 130 WGRTVREANLMGALAVQLGFPASRMILDTASRTTFQTAVNTRERILQFPVGRRYLVTSAD 189
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSII----PLSANFYLTELALKEYIGILIAYY 238
H+ R+ + F H ++ A DY + P + T + E +G+L
Sbjct: 190 HMPRAMMAFAHEQVSICAWPVDYEAIPIQALDMLNPQISALDKTTRVVHELLGMLYYRL 248
>gi|324998494|ref|ZP_08119606.1| hypothetical protein PseP1_06982 [Pseudonocardia sp. P1]
Length = 334
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 46/236 (19%), Positives = 93/236 (39%), Gaps = 26/236 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ I ++ L + ++ +LL + + T L +Y
Sbjct: 102 LACIVVLALPVATLYDDGHVLGAITIALLLLTVYVAFLFCTFL------TYAVVYGRLAA 155
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + +V+LG G P +R SR+ + L + ++ SGG
Sbjct: 156 RPGVDFVVVLGAGLIRGKVTPLLR--------SRLDRAIALRERETGTGNDPVLVTSGGR 207
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILVSS 181
+AE+ LLE GV D + E +S T +N F+ ++ + G ++V++
Sbjct: 208 GPDEPVAEAEAMAGYLLEQGVPEDAVLREDRSRTTLENLTFTDRLMADRVPGYRCVVVTN 267
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+H+ R+ L + G++ S +A +YL ++E++ IL ++
Sbjct: 268 NFHVFRTALLARQSGVDGHVLGSP-----------TARYYLPSATIREFVAILASH 312
>gi|326390031|ref|ZP_08211593.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
JW 200]
gi|325993896|gb|EGD52326.1| protein of unknown function DUF218 [Thermoanaerobacter ethanolicus
JW 200]
Length = 192
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 31 LLFSFIGWGIIPTI-LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
LL FIG I+ + ++ L++ L + KK ++I++LG P
Sbjct: 3 LLLRFIGILIVIFVTVVITLEYQIISFALYEKPKKS-DVIIVLGCAVY--------GKTP 53
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S R+ E +RLYK II+SGG ++E+ LL++G+ I
Sbjct: 54 SPFFKERLDEALRLYKEGYGKY----IIVSGGKGPGENISEAEAGKEYLLKNGIPEKIIL 109
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+ +S T++N FS ++ K I++S+ +HLKR+ + + IN AS S
Sbjct: 110 TDDKSFSTYENLLFSKEIMDKNSLKTAIIISNKFHLKRASVIAKRIDIN--ASFSGVFIK 167
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYYR 239
Y + + F L+E +L Y +
Sbjct: 168 RYMLSDEAYGF------LREIPALLYTYLK 191
>gi|229058345|ref|ZP_04196730.1| hypothetical protein bcere0026_14580 [Bacillus cereus AH603]
gi|228720019|gb|EEL71608.1| hypothetical protein bcere0026_14580 [Bacillus cereus AH603]
Length = 159
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + Y ++ I+SGG +
Sbjct: 6 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAE-YLKLHDKTIA---IVSGGQGK 53
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E++ L++ + D I +E +S T +N +F +I K +I V++ +H
Sbjct: 54 GEDITEALAMKQGLMKQNIAEDRIIMEDKSTSTDENIKFLKPLIPANMKKGMI-VTNDFH 112
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R++ G+ + + IIP + ++EY+ I ++
Sbjct: 113 MFRAKKIAAKQGLQLEGLPAK--TPKPIIIPSN---------VREYLAITQYWF 155
>gi|306825708|ref|ZP_07459047.1| conserved hypothetical protein [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304432069|gb|EFM35046.1| conserved hypothetical protein [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 340
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 24/236 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ + F+I++ + + + + F + I L Y L
Sbjct: 101 VILFFFVIMAVRVSDTKGLFYTNHLVNIIFFFLIYSYLIFGFAFAGFL--LYSILYLFIP 158
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
KK + I++ G G + ++ P +S RI + + Y + + II SGG
Sbjct: 159 KKKYYDFIIIHGAGL-----LNGEKVTPLLKS--RIDKAVEAYHQ--SLNPNVKIIASGG 209
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILV 179
++E+ N LLE V R+ I LE S T++N FS M + + + V
Sbjct: 210 RGGDEKISEAQAICNYLLEETDVPREAILLEEDSTTTYENLLFSKEMGEKLVASPRFLFV 269
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YH+ R+ Y + G+ +A +Y+ ++EYI + +
Sbjct: 270 TNDYHVFRTSTYARRIGMKGDGLGC-----------RTAAYYIPSAFIREYIALCV 314
>gi|194335748|ref|YP_002017542.1| protein of unknown function DUF218 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308225|gb|ACF42925.1| protein of unknown function DUF218 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 248
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 93/228 (40%), Gaps = 20/228 (8%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R FF+ LL ++ L++ ++ R +S + IV+L +
Sbjct: 27 RNSFFLWLGTLLLLAFSMPVMSDFLMRSVEVGEGRVPVSS--VGKADAIVVLSGMIVTVD 84
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG--LAESIVYNNKL 138
P + R + L+K+ + ++ + G + E + +
Sbjct: 85 GAPLGEWGG---AVDRFDGGVELFKAGR----APVVVFTRGQVPWQPGVVPEGELLAKRA 137
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNIILVSSAYHLKRSQLYFQHF 195
L GV + I+L ++ +T A +S ++ K + IILV+SA+H++R++ F+
Sbjct: 138 LLLGVPQSAIRLTGKAGNTADEAAAASVLLGASKKGVPRRIILVTSAFHMRRARFLFERA 197
Query: 196 GINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYIGILIAY 237
G + DY + S +P + ++ AL+E IG+L +
Sbjct: 198 GFAVEPFLVDYQTSEKSPLTVLSFLPNAEALAQSDRALREVIGLLFYW 245
>gi|269468165|gb|EEZ79864.1| hypothetical protein Sup05_0189 [uncultured SUP05 cluster
bacterium]
Length = 194
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY 104
L+K L+ ++Q+ + + I +LG+G P P + + S S R E + ++
Sbjct: 2 LIKQLENTHQKYDY---FNNNIEYIHVLGSGHYDNPKWP-LSSQISSTSLKRTMEGISIF 57
Query: 105 KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
K K + + +I +G + ++ + + + + +++ + DT + A F+
Sbjct: 58 K--KINKPNLKLIFTGFPGFGNQISNAEINAKIARIANISDNNLIINGNPKDTHEEAIFA 115
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY---YSIIPLSANFY 221
S+I K ILV+S H+ R+ F + G+N A+ +++ + + P +
Sbjct: 116 KSII---GDKPFILVTSVSHMTRAIELFTNMGMNPIAAPTEFKKSKKIEWLSAPSIGSIK 172
Query: 222 LTELALKEYIGILIAY 237
++ + E++G + A+
Sbjct: 173 KSKNIIHEFLGRIWAF 188
>gi|170758739|ref|YP_001788223.1| hypothetical protein CLK_2294 [Clostridium botulinum A3 str. Loch
Maree]
gi|169405728|gb|ACA54139.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 197
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG P ++ R+ E +RLY II+SG
Sbjct: 39 QPQKSDSIIILGCKVKGNDPTPFLKR--------RLDEGLRLYNEGYGKY----IIVSGA 86
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++E+ L++ G+++ I LE +S +T +N +FS +++ + I+VS+
Sbjct: 87 KGPGENISEAEAMEKYLVQKGLDKKFIILEDKSRNTLENIKFSKKKMEDNNLSSSIIVSN 146
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHLKR++L Q GI S ++ ++ S + L+E +L+ Y +
Sbjct: 147 KYHLKRAELLCQKEGIKASYSGV-FVRSHMS--------HEIMGFLREIPALLVYYIK 195
>gi|293364947|ref|ZP_06611664.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|307703198|ref|ZP_07640144.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|291316397|gb|EFE56833.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|307623273|gb|EFO02264.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
Length = 340
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 49/236 (20%), Positives = 92/236 (38%), Gaps = 24/236 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ + F+I++ + + + F + I L Y L
Sbjct: 101 VILFFFVIMAIRVSDTNGLFYTNHLVNIIFFFLIYSYLIFGFAFAGFL--LYSILYLFIP 158
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
KK + I++ G G + ++ P +S RI + + Y + + II SGG
Sbjct: 159 KKKYYDFIIIHGAGL-----LNGEKVTPLLKS--RIDKAVEAYHQ--SLNPNVKIIASGG 209
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILV 179
++E+ N LLE V R+ I LE S T++N FS M + + + V
Sbjct: 210 QGGDEKISEAQAICNYLLEETDVPREAILLEEDSTTTYENLLFSKEMGEKLVASPRFLFV 269
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YH+ R+ Y + G+ +A +Y+ ++EYI + +
Sbjct: 270 TNDYHVFRTSTYARRIGMKGDGLGC-----------RTAAYYIPSAFIREYIALCV 314
>gi|228996828|ref|ZP_04156462.1| hypothetical protein bmyco0003_14130 [Bacillus mycoides Rock3-17]
gi|229004505|ref|ZP_04162244.1| hypothetical protein bmyco0002_14590 [Bacillus mycoides Rock1-4]
gi|228756696|gb|EEM06002.1| hypothetical protein bmyco0002_14590 [Bacillus mycoides Rock1-4]
gi|228762889|gb|EEM11802.1| hypothetical protein bmyco0003_14130 [Bacillus mycoides Rock3-17]
Length = 193
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 44/229 (19%), Positives = 90/229 (39%), Gaps = 38/229 (16%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLG 73
++ + + + M++ +IG+ Y + D + ++LLG
Sbjct: 1 MIKKKKMMKYSLVVIMIIVGYIGFL------------QYNIYKHGHMEAPNDADYMILLG 48
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
EPS+ RI + K+ +Q +I+SGG + ++E+
Sbjct: 49 A--------KVKGTEPSYSLQYRIDKAAEYLKTHEQT----IVIVSGGKGKGEDISEARA 96
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L++ + I +E +S +T +N +FS S+I + K +I V++ +H+ R++ +
Sbjct: 97 MKKGLMKQSIAEQRIIMEDRSTNTDENIEFSKSLIPANKKKGMI-VTNDFHMFRAKKIAE 155
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
G+ + P S ++EY I Y+ NR
Sbjct: 156 KQGLKVNGLPAK--------TPKSIIIQSN---VREYFAIT-QYWLTNR 192
>gi|153938260|ref|YP_001392181.1| hypothetical protein CLI_2956 [Clostridium botulinum F str.
Langeland]
gi|152934156|gb|ABS39654.1| conserved hypothetical protein [Clostridium botulinum F str.
Langeland]
Length = 197
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG P ++ R+ E +RLY II+SG
Sbjct: 39 QPQKSDSIIILGCKVKGNDPTPFLKR--------RLDEGLRLYNEGYGKY----IIVSGA 86
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++E+ L++ G+++ I LE +S +T +N +FS +++ + I+VS+
Sbjct: 87 KGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLENIKFSKKKMEDNNLSSSIIVSN 146
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHLKR++L Q GI S ++ ++ S + L+E +L+ Y +
Sbjct: 147 KYHLKRAELLCQKEGIRASYSGV-FVRSHMS--------HEIMGFLREIPALLVYYIK 195
>gi|322374753|ref|ZP_08049267.1| putative membrane protein [Streptococcus sp. C300]
gi|321280253|gb|EFX57292.1| putative membrane protein [Streptococcus sp. C300]
Length = 340
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 24/236 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ + F+I++ + + + + F + I L Y L
Sbjct: 101 VILFFFVIMAIRVSDTKGLFYTNHLVNIIFFFLIYSYLIFGFAFAGFL--LYSILYLFIP 158
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
KK + I++ G G + ++ P +S RI + + Y + + II SGG
Sbjct: 159 KKKYYDFIIIHGAGL-----LNGEKVTPLLKS--RIDKAVEAYHQ--SLNPNVKIIASGG 209
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILV 179
++E+ N LLE V R+ I LE S T++N FS M + + + V
Sbjct: 210 QGGDEKISEAQAICNYLLEETDVPREAILLEEDSTTTYENLLFSKEMGEKLVASPRFLFV 269
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YH+ R+ Y + G+ +A +Y+ ++EYI + +
Sbjct: 270 TNDYHVFRTSTYARCIGMKGDGLGC-----------RTAAYYIPSAFIREYIALCV 314
>gi|254557746|ref|YP_003064163.1| integral membrane protein [Lactobacillus plantarum JDM1]
gi|308181833|ref|YP_003925961.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|254046673|gb|ACT63466.1| integral membrane protein [Lactobacillus plantarum JDM1]
gi|308047324|gb|ADN99867.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 361
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 50/215 (23%), Positives = 82/215 (38%), Gaps = 27/215 (12%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+F++ F L F L + + P L + I++LG G +
Sbjct: 141 YFLTVFPNLVIFYLGFWFYNYLTMLTIYQFNWPRL------RQDYIIVLGAGL-----LD 189
Query: 84 AIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
R+ P RI +R Y K ++ +I SGG + E + G
Sbjct: 190 GDRVSPLL--GQRIMRGLRFYQKQQRKTHHRAVMIFSGGQGGDETVPEGQAMLEYAIAHG 247
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINTK 200
+ D ETQS T QN QFS +I K I V++ YH R+ ++ + G+
Sbjct: 248 LPATDGWAETQSKTTLQNMQFSKQLIAQGPVKNPRTIFVTNNYHTFRAGMFAKQAGLKAD 307
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +A F+L + ++EYI I +
Sbjct: 308 GIGA-----------RTARFFLPDAIIREYIAIFV 331
>gi|323439958|gb|EGA97673.1| hypothetical protein SAO11_1094 [Staphylococcus aureus O11]
Length = 322
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 81/182 (44%), Gaps = 24/182 (13%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ K+ +II++LG G P + +R+ + +Y+ + II+
Sbjct: 140 HRSYNKEVDIIIVLGAGIFTEFVTPML--------AARLDRALDIYQQQASAT---KIIV 188
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NI 176
SG + E++ L+ GV++ DI +E+ S++T+ N +S +I N+ K I
Sbjct: 189 SGRQGPDEPIPEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHKAVKI 248
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ V+S +H+ R+ Q G++ S + + + +K+Y+G++
Sbjct: 249 VCVTSQFHVLRALRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQ 297
Query: 237 YY 238
Y
Sbjct: 298 YR 299
>gi|307717857|ref|YP_003873389.1| transmembrane protein [Spirochaeta thermophila DSM 6192]
gi|306531582|gb|ADN01116.1| probable transmembrane protein [Spirochaeta thermophila DSM 6192]
Length = 249
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 46/241 (19%), Positives = 102/241 (42%), Gaps = 22/241 (9%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L L+V L S R F ++ +LL L+ ++ P
Sbjct: 18 LWVVFALLVGVVSLRRGSRRGAVAAWVFAGFLYLGNTHLVEHLLLAPLERAF------PV 71
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
W G + ++ G PA + P + +R++ +R + + ++++GG
Sbjct: 72 WDGGGGVRYVVVLGGGAQAGTPAGDV-PGVVTLARLWGGLRYARM-----LGVPLVLAGG 125
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
G +E + + + E G +++ +E +S T++NA+ ++ M+ ++LV+S
Sbjct: 126 SVWDEGKSEGEMMADLVRELGW--EEVVVEGESRTTWENARNTARMV---GRGPVLLVTS 180
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAY-----YSIIPLSANFYLTELALKEYIGILIA 236
AYH++R+ F+ G+ + D+ + + + + + AL+EY+G++
Sbjct: 181 AYHMQRAVWCFRAQGVEVIPAPVDFRDERPAHWIFYLGISAEAARDVQAALREYVGMVWY 240
Query: 237 Y 237
Sbjct: 241 R 241
>gi|301053252|ref|YP_003791463.1| hypothetical protein BACI_c16640 [Bacillus anthracis CI]
gi|300375421|gb|ADK04325.1| putative membrane protein [Bacillus cereus biovar anthracis str.
CI]
Length = 179
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 71/152 (46%), Gaps = 15/152 (9%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + I++LG+ +PS+ RI + KS ++ I+SGG +
Sbjct: 39 DADYIIVLGS--------KVNGTKPSYSLQYRIDKAAEYLKSHEKAIA----IVSGGKGK 86
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
++E++ N+L++ + D I +E +S T +N +FS +I + K +I V++ +H
Sbjct: 87 GEDISEALAMKNELMKLNIAEDRIIMEDKSTSTDENIKFSKPLIPDNMKKGMI-VTNDFH 145
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
+ R++ G+ + + + +IP
Sbjct: 146 MFRAKKIAAKQGLQLEGLPA--VTPKRIVIPS 175
>gi|28379603|ref|NP_786495.1| integral membrane protein [Lactobacillus plantarum WCFS1]
gi|28272443|emb|CAD65367.1| integral membrane protein [Lactobacillus plantarum WCFS1]
Length = 361
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 50/215 (23%), Positives = 82/215 (38%), Gaps = 27/215 (12%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+F++ F L F L + + P L + I++LG G +
Sbjct: 141 YFLTVFPNLVIFYLGFWFYNYLTMLTIYQFNWPRL------RQDYIIVLGAGL-----LD 189
Query: 84 AIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
R+ P RI +R Y K ++ +I SGG + E + G
Sbjct: 190 GDRVSPLL--GQRIMRGLRFYQKQQRKTHHRAVMIFSGGQGGDETVPEGQAMLEYAIAHG 247
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINTK 200
+ D ETQS T QN QFS +I K I V++ YH R+ ++ + G+
Sbjct: 248 LPATDGWAETQSKTTLQNMQFSKQLIAQGPVKNPRTIFVTNNYHTFRAGMFAKQAGLKAD 307
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +A F+L + ++EYI I +
Sbjct: 308 GIGA-----------RTARFFLPDAIIREYIAIFV 331
>gi|119358364|ref|YP_913008.1| hypothetical protein Cpha266_2596 [Chlorobium phaeobacteroides DSM
266]
gi|119355713|gb|ABL66584.1| protein of unknown function DUF218 [Chlorobium phaeobacteroides DSM
266]
Length = 250
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 52/249 (20%), Positives = 101/249 (40%), Gaps = 21/249 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L + ++ LL +S IFF + +FS + L + + Y S
Sbjct: 13 LPLGLCFLLFAAGLLLKSRGVIFFGVALLWVFS---MPVTGDFLTRLVCGVYSF-RGSAA 68
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D + +V+L + P ++ R + L+++ K ++ +GG
Sbjct: 69 SLPDADAVVVLSGMIERVDGAPLGEW---GEAVDRFDGGIELFRAGK----APLLVFTGG 121
Query: 122 --DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNII 177
+ + E + + + + GV + I++ + +T + A ++ + G K +I
Sbjct: 122 WIPWRPDRVPEGELLSRRAVLLGVSPEAIRVTEKVENTAEEAVAVRRLLGSGLGSEKTVI 181
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYI 231
LV+SAYH+ RS L F+ G+ D+ S +P + L+E AL+E +
Sbjct: 182 LVTSAYHMHRSVLLFRREGLRVIPFPVDFSFGGPESLTVLSFLPDAGALRLSERALRELL 241
Query: 232 GILIAYYRG 240
GI +G
Sbjct: 242 GIAFYRVKG 250
>gi|87123192|ref|ZP_01079043.1| hypothetical protein RS9917_05015 [Synechococcus sp. RS9917]
gi|86168912|gb|EAQ70168.1| hypothetical protein RS9917_05015 [Synechococcus sp. RS9917]
Length = 250
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 87/229 (37%), Gaps = 22/229 (9%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R + + + L F G++ +L + L+ +QR L + IV+L G
Sbjct: 30 RWRWPLIGALALLWFFSLGLVSQVLWRWLEAPWQR--LPAAAAPTADAIVVLSGGRH--- 84
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG--LAESIVYNNKL 138
P ++ R + LY++ K ++ +GG E Y +
Sbjct: 85 PAPGAARVSEWEDPDRFLAGLDLYRAGK----APRLLFTGGASPFRPGQPPEGQRYLAEA 140
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ G+ + + ++T + A ++ I+LV+SA+H++R+Q F+ G+
Sbjct: 141 EQLGIPSEAMASTPVVVNTAEEAVAIRRLL-QAPSARILLVTSAFHMRRAQRLFERQGLE 199
Query: 199 TKASCSDYLNA----------YYSIIPLSANFYLTELALKEYIGILIAY 237
K D+ +P + + AL+E +G L+
Sbjct: 200 VKPFPVDFQTRGAWAGSLWRDPSQWLPTAQALDHSSRALRELLGRLVYR 248
>gi|314935744|ref|ZP_07843096.1| putative membrane protein [Staphylococcus hominis subsp. hominis
C80]
gi|313656309|gb|EFS20049.1| putative membrane protein [Staphylococcus hominis subsp. hominis
C80]
Length = 318
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 49/250 (19%), Positives = 100/250 (40%), Gaps = 39/250 (15%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS------------- 52
+F I L + R++ F+ +F ++ +P + L +
Sbjct: 72 LFKIKKGTCFLNKMFRRLINGVLFIGIFIYLSTIPLPILNGMFLWIALILFSACYAFIIY 131
Query: 53 --YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
+ + K ++I++LG G P + SR+ + +YK
Sbjct: 132 LIFSSAFERAKTHKQYDMILILGAGIFNETVTPML--------ASRLDRALEIYK---VQ 180
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
S +C I++SGG ++E++ N L++ GV I +E+QS T++N +S S I
Sbjct: 181 SHNCNILVSGGQGPDEPISEALAMKNYLIKCGVSSSSILMESQSSSTYENFLYSKSFINT 240
Query: 171 --MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
+I+ V+S +H+ R+ + Q I S + +L + L+
Sbjct: 241 SFENVPSILCVTSQFHILRALRFAQKLNIKIIGLGS-----------STPYHFLDKALLR 289
Query: 229 EYIGILIAYY 238
+++ ++ Y
Sbjct: 290 DFLALIYQYK 299
>gi|229084714|ref|ZP_04216979.1| hypothetical protein bcere0022_13480 [Bacillus cereus Rock3-44]
gi|228698598|gb|EEL51318.1| hypothetical protein bcere0022_13480 [Bacillus cereus Rock3-44]
Length = 172
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 74/178 (41%), Gaps = 24/178 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ D + ++LLG EPS+ RI + K+ +Q +I+SG
Sbjct: 15 KAPDDADYMILLGA--------KVKGTEPSYSLQYRIDKAAEYLKTHEQT----IVIVSG 62
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E++ L++ + I +E +S +T +N +FS ++I + K +I V+
Sbjct: 63 GKGKGEDISEALAMKQGLMKQNIAEQRIIMEDRSTNTDENIEFSKALIPADKKKGMI-VT 121
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ +H+ R++ + G+ + + ++EY I +
Sbjct: 122 NDFHMFRAKKIAKKQGLKVDGLSAKTPKPI---------IVQSN--VREYFAITQYWL 168
>gi|290473867|ref|YP_003466741.1| hypothetical protein XBJ1_0806 [Xenorhabdus bovienii SS-2004]
gi|289173174|emb|CBJ79947.1| putative enzyme [Xenorhabdus bovienii SS-2004]
Length = 268
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 16/208 (7%)
Query: 39 GIIPTILLKHLQFSY-QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
I LL ++ Y QR + IV+LG G T P A S R+
Sbjct: 56 QPIADKLLLPIEGKYVQRYEPDKAYIAPVKYIVVLGGGFTYNP-QWAPSANLISNSLPRV 114
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E +RLY + +I +GG + ++ + + G+ +D + LDT
Sbjct: 115 TEGIRLYH----LNPGTKMIFTGGKGV-NSISSAEIAAMVAQSLGIPVEDTIALREPLDT 169
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN------AYY 211
+ ++ + K + + ILV+SA H++RS +F+ G++ A ++ L A+
Sbjct: 170 E---EEAAEVEKVLGQQPFILVTSANHMERSLKFFERRGMHPIAGPANQLAVTTPLYAWE 226
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYR 239
IP + F TE A E +G + +
Sbjct: 227 KYIPSAYYFSHTERAWYETLGKIWQAIK 254
>gi|170755560|ref|YP_001782537.1| hypothetical protein CLD_1642 [Clostridium botulinum B1 str. Okra]
gi|169120772|gb|ACA44608.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
Length = 197
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG P ++ R+ E +RLY II+SG
Sbjct: 39 QPQKSDSIIILGCKVKGNDPTPFLKR--------RLDEGLRLYNEGYGKY----IIVSGA 86
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++E+ L++ G+++ I LE +S +T +N +FS +++ + I+VS+
Sbjct: 87 KGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLENIKFSKKKMEDNNLSSSIIVSN 146
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHLKRS+L Q GI S ++ ++ S + L+E +L+ Y +
Sbjct: 147 KYHLKRSELLCQKEGIKASYSGV-FVRSHMS--------HEIMGFLREIPALLVYYIK 195
>gi|227890086|ref|ZP_04007891.1| membrane protein [Lactobacillus johnsonii ATCC 33200]
gi|227849530|gb|EEJ59616.1| membrane protein [Lactobacillus johnsonii ATCC 33200]
Length = 346
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 43/230 (18%), Positives = 89/230 (38%), Gaps = 25/230 (10%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ + L + K+ + ++ FI II I + + L K + +
Sbjct: 118 IIAYLFLFPLVGKLTHNNFATYVYLFINLVIIYLIFIMMMYTLTSWINLVNIKTKKLDYV 177
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG G P + +RI + +Y+ + II+SGG +
Sbjct: 178 VVLGAGLMGKKVTPLL--------AARINRGIEVYR----RNPGSKIIMSGGQGPGEEIP 225
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E++ E G+ + DI +E +S T +N FS ++K +V+++YH+ R+
Sbjct: 226 EAVAMAKYAEEEGIPKQDIIVEDKSKTTRENLIFSHRLMK--PDSRFAIVTNSYHVYRAL 283
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + G+ + + ++ ++E+I L +R
Sbjct: 284 VLAKRLGLQCIGYGA-----------KTKWYFTLNAFVREFIAYLTITWR 322
>gi|239638178|ref|ZP_04679130.1| putative membrane protein [Staphylococcus warneri L37603]
gi|239596199|gb|EEQ78744.1| putative membrane protein [Staphylococcus warneri L37603]
Length = 320
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 47/240 (19%), Positives = 95/240 (39%), Gaps = 27/240 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M LS + L + S+ + ++ L IG+ + L + + S
Sbjct: 85 MGLSVMRLTLFISACFYISLSPLLIINGIALWLCLIGFTTLFAFLCYLI---WSSVFGSR 141
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + ++I++LG G P ++ R+ + +Y + +++SG
Sbjct: 142 HFNQSVDLIIVLGAGIFTEEVTPMLK--------ERLNRALEIYHHSEHK---PQLLVSG 190
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIIL 178
G + ESI L++ GV D+I LE QS +T N +S +I ++
Sbjct: 191 GQGPDEPIPESIAMQRYLIKQGVPNDNILLEQQSTNTHTNFVYSKEIILQYFNNMPKMVC 250
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+S +H+ R+ Q+ I T S +F+ +++++G++ Y
Sbjct: 251 VTSQFHILRALKLAQNLDIPTYGVGSH----------TPYHFFHI-ALIRDFLGVMYQYR 299
>gi|15893732|ref|NP_347081.1| hypothetical protein CA_C0441 [Clostridium acetobutylicum ATCC 824]
gi|15023296|gb|AAK78421.1|AE007558_11 Uncharacterized conserved membrane protein of SANA family
[Clostridium acetobutylicum ATCC 824]
gi|325507855|gb|ADZ19491.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
Length = 259
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 93/238 (39%), Gaps = 41/238 (17%)
Query: 1 MLLSWIFLIVSYWH---------LLCQSIRKIFFMSCFM-LLFSFIGWGIIPTILLKHLQ 50
M+L + ++ ++ L + + I + C + ++F F +L+ + Q
Sbjct: 42 MILGILCILFGIFYKKHEIKAGSRLSKIDKCIKGIVCAICVVFIFT-----EAVLVYNGQ 96
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
Y K + I++LG G Y R+ + +
Sbjct: 97 SEY---------KGKLDYIIVLGAGLR--------GKHMLGTQYERVKKAAE----YVKE 135
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ I++SGG ++E+ L G + D I +E +S +TF+N + S +++
Sbjct: 136 NPDVKIVVSGGKGNGEDISEAEAMKQYFLNKGFKNDSIIMEDKSKNTFENLRNSKKILEK 195
Query: 171 MQGK---NIILVSSAYHLKRSQLYFQHFGIN--TKASCSDYLNAYYSIIPLSANFYLT 223
+ K + +V+S+YH+ R++L + G+ + + L S FY +
Sbjct: 196 ISNKKEIRVGVVTSSYHITRAKLLGKRVGLKLYAIPAPINKLLLLQSYTREFFAFYKS 253
>gi|325965245|ref|YP_004243151.1| hypothetical protein Asphe3_39290 [Arthrobacter phenanthrenivorans
Sphe3]
gi|323471332|gb|ADX75017.1| uncharacterized conserved protein [Arthrobacter phenanthrenivorans
Sphe3]
Length = 331
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 89/215 (41%), Gaps = 28/215 (13%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+L + G+ + + L L +S P P++ +V+LG+G P
Sbjct: 120 VLTGTMAVLVGYFGF-VFASYLAYSLIYSSLPPRRRPEY------VVVLGSGLAGNAVPP 172
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ +R+ + LY+ K +I SGG E L E G+
Sbjct: 173 LL--------AARLDAAVSLYR-GKHGGTIRALIPSGGRGADELTTEGAAMARYLQEQGI 223
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
I +E ++ T +N FS +++ + + + +V+S+YH+ R+ ++ + G+ +
Sbjct: 224 PAASILIEDKATTTLENLVFSRNLM-DRPDRPVTVVTSSYHVFRAAMFTRRAGMRAHVTG 282
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ +A +++ L+E+I IL+ Y
Sbjct: 283 A-----------RTAGYFMPSAFLREFIAILVKYK 306
>gi|228990732|ref|ZP_04150697.1| hypothetical protein bpmyx0001_14940 [Bacillus pseudomycoides DSM
12442]
gi|228769258|gb|EEM17856.1| hypothetical protein bpmyx0001_14940 [Bacillus pseudomycoides DSM
12442]
Length = 193
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 86/220 (39%), Gaps = 38/220 (17%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ + M++ +IG+ Y + D + ++LLG
Sbjct: 10 YSLVVIMIIVGYIGFL------------QYNIYKHGHMEAPNDADYMILLGA-------- 49
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
EPS+ RI + K+ +Q +I+SGG + ++E+ L+
Sbjct: 50 KVKGTEPSYSLQYRIDKAAEYLKTHEQT----IVIVSGGKGKGEDISEARAMKKGLMTQS 105
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ I +E +S +T +N +FS S+I + K +I V++ +H+ R++ + G+
Sbjct: 106 IAEQRIIMEDRSTNTDENIEFSKSLIPANKKKGMI-VTNDFHMFRAKKIAEKQGLKVNGL 164
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
+ P S ++EY I Y+ NR
Sbjct: 165 PAK--------TPKSIIIQSN---VREYFAIT-QYWLTNR 192
>gi|281491044|ref|YP_003353024.1| hypothetical protein LLKF_0556 [Lactococcus lactis subsp. lactis
KF147]
gi|281374802|gb|ADA64322.1| Hypothetical protein LLKF_0556 [Lactococcus lactis subsp. lactis
KF147]
Length = 341
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 91/276 (32%), Gaps = 62/276 (22%)
Query: 2 LLSWIFLIVSYWHLLCQSIRK----------------IFFMSCFMLLFSFIGWGI----- 40
+L IFL+V + + + + + F LF +
Sbjct: 68 ILPLIFLLVCGYFIFNSKTMRTKEGKSATAKLSALFGLNLLIAFPALFMLFTFSTKTIPQ 127
Query: 41 -------------IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
I L Y +K + I++LG+G P ++
Sbjct: 128 IIWYILLYILLIDIILCFLFAAYILYSWMSQMIPLQKKIDYIIILGSGVRSEEVPPLLK- 186
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
SR+ + + Y+ + ++SGG ++E+ L +
Sbjct: 187 -------SRLDKGIEYYQ----KNPTAKFVVSGGQGADEPVSEAFAMRKYLHSQNIPNHQ 235
Query: 148 IKLETQSLDTFQNAQFSSSMI-----KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
I E +S T++N FS +I +II ++ YH+ R LY Q + +
Sbjct: 236 ILFEDKSTTTYENMLFSKRIINEDWSDKEMPPSIIFSTNNYHVLRGSLYAQRVKLKVQGV 295
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ +A ++L ++EYI +L+
Sbjct: 296 GAP-----------TALYFLPTALIREYIALLLHRK 320
>gi|260584774|ref|ZP_05852519.1| membrane protein [Granulicatella elegans ATCC 700633]
gi|260157431|gb|EEW92502.1| membrane protein [Granulicatella elegans ATCC 700633]
Length = 342
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 105/265 (39%), Gaps = 53/265 (20%)
Query: 4 SWIFLIVSYWHLLCQSIRKIF-----FMSCFMLLFSFIGWGIIP-------------TIL 45
S +FLIV+ + LL + M +LLF W + IL
Sbjct: 72 SGLFLIVNGFILLKKEGFSKANLLSPIMGIVILLFFVFMWIRVGLVTNDFFFYNPWIDIL 131
Query: 46 LKHLQFS-------------YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
+ +S Y L K+ + I++ G G + R+ P +
Sbjct: 132 FMFIIYSYIIFGFAFVGFMMYSFVYLWVPKKQHYDFIIIHGAGL-----LDGERVTPLLK 186
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLE 151
RI + ++ ++ K + H +I SGG ++E+ N L+E V ++ I LE
Sbjct: 187 --KRIDKAVQAFQQSK--NPHIQLIASGGQGSDEKISEAQAMYNYLVEQTDVPKEAILLE 242
Query: 152 TQSLDTFQNAQFSSSMIKNM-QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
+S T++N FS + + + + + V++ YH+ R+ Y + G+
Sbjct: 243 DKSTTTYENLLFSKELGEQLVENPRFLFVTNDYHVFRTSTYARQIGMQGDGLGC------ 296
Query: 211 YSIIPLSANFYLTELALKEYIGILI 235
+A++Y+ ++EY+ + +
Sbjct: 297 -----STASYYIPSAFIREYVAMCV 316
>gi|194334537|ref|YP_002016397.1| hypothetical protein Paes_1732 [Prosthecochloris aestuarii DSM 271]
gi|194312355|gb|ACF46750.1| protein of unknown function DUF218 [Prosthecochloris aestuarii DSM
271]
Length = 250
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 42/242 (17%), Positives = 99/242 (40%), Gaps = 16/242 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L + ++V L + + + L +G + +++ ++ +R +
Sbjct: 12 VLPLGLGIVVVVLGALFRRWW---LVWSGVGLLWVLGMPVTGDWMMRMVEGVDRR--VDV 66
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG T + P +R + R + +++ K + T
Sbjct: 67 ALLEPADAVVVLGGVTVQV---PGVRYGEWGDAADRFEGGVEVFRGGKAPLLVLTGAKMP 123
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
P E + + L GV + +++ + +T A+ ++ + +ILV+
Sbjct: 124 WAP--DARVEGELLRERALLLGVPEESVRVTGRVGNTADEAREVRKLLAGIARPRVILVT 181
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYY------SIIPLSANFYLTELALKEYIGIL 234
SA+H++R+ + F+H G+ D+ ++Y +P + +ELA++E IG L
Sbjct: 182 SAFHMRRAAMLFRHAGLRVDEFPVDFRTSFYDRLTVIDFLPCADGLENSELAIREMIGWL 241
Query: 235 IA 236
Sbjct: 242 YY 243
>gi|288574503|ref|ZP_06392860.1| protein of unknown function DUF218 [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570244|gb|EFC91801.1| protein of unknown function DUF218 [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 270
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 47/250 (18%), Positives = 100/250 (40%), Gaps = 27/250 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF-----FMSCFMLLFSFIGWGIIPTILLKHLQ-FSYQ 54
+ LS LI ++ + + +F + ++ + + +LL+ ++ + +
Sbjct: 16 VFLSITILIGTFLTISNRRRGPLFCFVPSIIILSVVFLLSLSLPVTSHLLLRQVEIYRKE 75
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
P P ++++L G T + + EP + R+ E L +
Sbjct: 76 LPPEGPIP-----VVMILSGGFTR---KNSGKTEPGPFTTQRLIEGASLARRKGY----- 122
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
I++SGG + + + + G + + I LE S T++N +S+S+++
Sbjct: 123 PILLSGGLSYDKSESIARSMERSIRKWGYKGE-IMLEENSRTTWENMTYSASILRRKGID 181
Query: 175 NIILVSSAYHLKRSQLYFQHF--GINTKASCS-----DYLNAYYSIIPLSANFYLTELAL 227
IILV++++H+KRS + I D + IP + + LA
Sbjct: 182 RIILVTNSFHMKRSLWMAKKAMPDIEVYPYAIGSLADDMDSDPLKWIPTAGALRDSSLAW 241
Query: 228 KEYIGILIAY 237
KE +G+ +
Sbjct: 242 KEIVGLTVYR 251
>gi|199597870|ref|ZP_03211296.1| hypothetical protein LRH_11467 [Lactobacillus rhamnosus HN001]
gi|258509552|ref|YP_003172303.1| hypothetical protein LGG_02557 [Lactobacillus rhamnosus GG]
gi|199591306|gb|EDY99386.1| hypothetical protein LRH_11467 [Lactobacillus rhamnosus HN001]
gi|257149479|emb|CAR88452.1| Conserved domain protein [Lactobacillus rhamnosus GG]
gi|259650819|dbj|BAI42981.1| conserved hypothetical protein [Lactobacillus rhamnosus GG]
Length = 352
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 89/239 (37%), Gaps = 29/239 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTI--LLKHLQFSYQRPLLSPQWKK 64
L++ + + F G ++ T+ L L RP
Sbjct: 113 LLLLEIAASFGRRFIPEPLYVALAVFFGLGGLYVLLTLYNFLTALILYNLRPQPH----- 167
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGGDP 123
+ +++LG G + S SRI ++ Y K K+ II SGG
Sbjct: 168 NRTFLIVLGAGLLHGDQV-------SPLLASRIDTAIKFYHKQLKKGRPAPKIIFSGGKG 220
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVS 180
++E++ L G+ D LE QS T +N +FS +I G+ +
Sbjct: 221 ADEAISEALAMQRYALGKGIPEADTLLEDQSTTTLENMRFSKRLIIQEIGEAPYKASFFT 280
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHL R+ ++ + GI + ++ ++L ++EY+ +++ Y R
Sbjct: 281 NNYHLLRAGIFARMAGIAANGVGGN-----------TSFYFLPNAVIREYLALVVLYKR 328
>gi|302536555|ref|ZP_07288897.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302445450|gb|EFL17266.1| conserved hypothetical protein [Streptomyces sp. C]
Length = 337
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 90/202 (44%), Gaps = 22/202 (10%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
G + I L L +++ + + + D + +V+LG+G +P + SR+
Sbjct: 133 GYVAFIFLCFLGYAFLYGRI--KVRGDVDHVVMLGSGLIGGDRVPPL-------LASRLR 183
Query: 99 ETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ ++Y++ +++ SGG ++E+ + L+ GV + +KLE S T
Sbjct: 184 KGQQIYEAQLARGSRPPVLLTSGGKGSDERVSEARAMADWLIAEGVPAEHVKLEENSATT 243
Query: 158 FQNAQFSSSMI-KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
+N FS ++ + G ++V++ +H R+ + + G+N + S
Sbjct: 244 EENMLFSKGIMLADKPGYRCVVVTNNFHAFRAAMLARKTGVNGQVLGSP----------- 292
Query: 217 SANFYLTELALKEYIGILIAYY 238
+A ++L L+E++ + +
Sbjct: 293 TARYFLPSALLREFVAVFWEHR 314
>gi|314934418|ref|ZP_07841777.1| putative membrane protein [Staphylococcus caprae C87]
gi|313652348|gb|EFS16111.1| putative membrane protein [Staphylococcus caprae C87]
Length = 320
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 49/264 (18%), Positives = 104/264 (39%), Gaps = 48/264 (18%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWG------------IIPTILLKH 48
ML++ +F+++ + HL ++F F+ L+ I II + L
Sbjct: 58 MLIASLFILIKHRHLFNFKRGRLFLKHMFIYLYRIILLLSACIYISTVEIPIINGLALWF 117
Query: 49 LQFSYQRPLLSPQW------------KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
+Y + K+ ++I++LG G P + R
Sbjct: 118 ATIAYSTTFAFICYISWSSAYGSHLCSKNVDLIMVLGAGIFTEEVTPML--------AER 169
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ +++Y+S K +++SGG + E++ L+ GV I +E QS +
Sbjct: 170 LNCAIKVYESQKHSPY---MLVSGGQGPDEPITEALAMKRYLIAKGVPEKRILMEAQSTN 226
Query: 157 TFQNAQFSSSMIKNMQGKN--IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
T+ N +S +I+ G+ + V+S +H+ RS G+ +Y +
Sbjct: 227 TYTNFLYSKPIIEEHFGRRAQFLCVTSQFHILRSLRLANKVGLE-----------FYGLG 275
Query: 215 PLSANFYLTELALKEYIGILIAYY 238
+ + + +K+++G++ Y
Sbjct: 276 SHTPYHFFSIALIKDFLGLMYQYK 299
>gi|300703732|ref|YP_003745334.1| hypothetical protein RCFBP_11417 [Ralstonia solanacearum CFBP2957]
gi|299071395|emb|CBJ42714.1| conserved exported protein of unknown function [Ralstonia
solanacearum CFBP2957]
Length = 265
Score = 124 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 51/246 (20%), Positives = 104/246 (42%), Gaps = 14/246 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ + + W + + + + +++ +L + L + Q
Sbjct: 22 LVLALLAGMVAWRMPRRRRPAGWVLGIALIVAWLAATPWCGRLLASWTHPAQPVRLDALQ 81
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+G +VLLG + A + E + S + T+ Y + H+ ++ +GG
Sbjct: 82 PHGEG-AVVLLGGSRKLAAREYAGQGETALSGLS-LERTV--YAARLAHAARLPVLATGG 137
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
PQ G+ E+ + + + G +D +ET+S T +NA FS+ M++ + I LV+
Sbjct: 138 APQGLGVPEAELMGRLVADLG--QDARWIETRSATTEENAAFSAPMLRAAGIQRIYLVTH 195
Query: 182 AYHLKRSQLYFQHFGINTKASCSDY--------LNAYYSIIPLSANFYLTELALKEYIGI 233
+H+ R++ YF+ G+ + + + S++P + LT AL+E +G
Sbjct: 196 YWHMARARRYFEGQGLIVTPAPCGWGGEVGESPVGGILSLLPRTDGLALTRSALREALGQ 255
Query: 234 LIAYYR 239
L R
Sbjct: 256 LWLSMR 261
>gi|313609567|gb|EFR85104.1| integral membrane protein [Listeria monocytogenes FSL F2-208]
Length = 157
Score = 124 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 13/144 (9%)
Query: 98 FETMRLY-KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ Y K + T I+SGG ++E+ + L+ G++ I +E QS++
Sbjct: 1 NRAIAFYEKQYSKTGKRATFIVSGGQGANETVSEAQAMRDYLISKGIDETFIIMEDQSVN 60
Query: 157 TFQNAQFSSSMIKN-MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T QN QFS + + M N + ++ +HL R+ LY + G+ ++ +
Sbjct: 61 TLQNMQFSKAKMDAIMPVYNSLFSTNNFHLFRAGLYARKAGLKSQGIGA----------- 109
Query: 216 LSANFYLTELALKEYIGILIAYYR 239
+A +Y+ ++E+I I + Y +
Sbjct: 110 KTALYYMPNALIREFIAITVMYKK 133
>gi|258540756|ref|YP_003175255.1| hypothetical protein LC705_02565 [Lactobacillus rhamnosus Lc 705]
gi|257152432|emb|CAR91404.1| Conserved domain protein [Lactobacillus rhamnosus Lc 705]
Length = 352
Score = 124 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 89/239 (37%), Gaps = 29/239 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTI--LLKHLQFSYQRPLLSPQWKK 64
L++ + + F G ++ T+ L L RP
Sbjct: 113 LLLLEIAASFGRRFIPEPLYVALAVFFGLGGLYVLLTLYNFLTALILYNLRPQPH----- 167
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGGDP 123
+ +++LG G + S SRI ++ Y K K+ II SGG
Sbjct: 168 NRTFLIVLGAGLLHGDQV-------SPLLASRIDTAIKFYHKQLKKGRPAPKIIFSGGKG 220
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVS 180
++E++ L G+ D LE QS T +N +FS +I G+ +
Sbjct: 221 ADEAISEALAMQRYALGKGIPEADTLLEDQSTTTLENMRFSKRLIIQEIGEAPYKASFFT 280
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHL R+ ++ + GI + ++ ++L ++EY+ +++ Y R
Sbjct: 281 NNYHLLRAGIFARMAGIAANGVGGN-----------TSFYFLPNAVIREYLALVVLYKR 328
>gi|317489297|ref|ZP_07947813.1| DUF218 domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|325832335|ref|ZP_08165334.1| putative membrane protein [Eggerthella sp. HGA1]
gi|316911603|gb|EFV33196.1| DUF218 domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|325486171|gb|EGC88625.1| putative membrane protein [Eggerthella sp. HGA1]
Length = 333
Score = 124 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 81/204 (39%), Gaps = 33/204 (16%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
S++ + +L L + ++D + IV+ G G + P +
Sbjct: 133 SYVAFTFAALLLYSWLYRRLPK-------RRDYDYIVVHGAGLSGTKPTPLL-------- 177
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLET 152
+R+ + + L+++ + II SGG ++E+ L+E GV D + E
Sbjct: 178 AARLDKAVELWEADHRR---AVIIASGGQGADEAVSEAEAMRTYLVEERGVPADAVIEED 234
Query: 153 QSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+S T +N + S +++ G +V+S YH+ R+ Y G+ S
Sbjct: 235 RSTTTMENLRNSKAIMDARSGAGAYRAAVVTSDYHVFRTAEYAHKIGLAADGVGS----- 289
Query: 210 YYSIIPLSANFYLTELALKEYIGI 233
+A ++ ++EY+ +
Sbjct: 290 ------RTARYFWPTAFIREYVAV 307
>gi|300769543|ref|ZP_07079429.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300492958|gb|EFK28140.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 361
Score = 124 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 50/215 (23%), Positives = 82/215 (38%), Gaps = 27/215 (12%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+F++ F L F L + + P L + I++LG G +
Sbjct: 141 YFLTVFPNLVIFYLGFWFYNYLTMLTIYQFNWPRL------RQDYIIVLGAGL-----LD 189
Query: 84 AIRIEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
R+ P RI +R Y K ++ +I SGG + E + G
Sbjct: 190 GDRVSPLL--GQRIMRGLRFYQKQQRKTHHRAVMIFSGGQGGDETVPEGQAMLEYAIAHG 247
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINTK 200
+ D ETQS T QN QFS +I K I V++ YH R+ ++ + G+
Sbjct: 248 LPATDGWAETQSKTTLQNMQFSKQLIAQGPVKNPRTIFVTNNYHTFRAGMFAKQAGLKAD 307
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +A F+L + ++EYI I +
Sbjct: 308 GIGA-----------RTARFFLPDAIIREYIAIFV 331
>gi|269120765|ref|YP_003308942.1| hypothetical protein Sterm_2157 [Sebaldella termitidis ATCC 33386]
gi|268614643|gb|ACZ09011.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 243
Score = 124 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+P + + +V+LG+G S + R + + K H + +
Sbjct: 80 NPSGAQKSDFVVVLGSGLRY-------GTYLSPEGKRRSDKAIEYLKEY----PHLNVFL 128
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--NMQGKNI 176
+GG + ES++ LE+G++ + I LE +S +T +N +F +K +M+ NI
Sbjct: 129 TGGQGIDEKVPESVIMKEYFLENGIDENRIFLEDKSTNTNENIKFYIDALKDTDMEYHNI 188
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
+LV+S +H+ R+ + +H+ + CS N S IP
Sbjct: 189 LLVTSDFHMPRAGVIARHYNLTVYPLCSKTRN--ISFIPN 226
>gi|327184361|gb|AEA32808.1| hypothetical protein LAB52_09530 [Lactobacillus amylovorus GRL
1118]
Length = 367
Score = 124 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 45/243 (18%), Positives = 90/243 (37%), Gaps = 33/243 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS-YQRPLLSP 60
L+ I ++V L + +F + L+ + ++ L+ L + Y R
Sbjct: 123 LIFSILVLVGPGRYLPHWLSALFASIPAIALYLGL---VLYNFLVNLLLYQIYPR----- 174
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIIS 119
+ +++LG G + S +RI ++ + ++ II+S
Sbjct: 175 --HYKQDYLIVLGAGLLNGDQV-------SKLLAARINRAIQFSNRQYQKGRKRPIIIMS 225
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NI 176
GG + E++ GV D I +E QS +T+QN FS +
Sbjct: 226 GGQGPDEKIPEALAMARFAQHRGVPTDQILIEDQSKNTYQNMLFSKRIATQDFDSDKFRA 285
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 286 TFFSNNYHIFRAALLAKEVGLKANGVGA-----------FTRFYYLPNAIIREFAGVFVM 334
Query: 237 YYR 239
+ R
Sbjct: 335 HKR 337
>gi|182417046|ref|ZP_02948424.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237668527|ref|ZP_04528511.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182379055|gb|EDT76559.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237656875|gb|EEP54431.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 273
Score = 124 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 25/168 (14%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ I++LG G + EPS R+ + K HS I++SGG
Sbjct: 115 DYILILGAGLSN-------GSEPSLTLSGRLDAAIEYIKDYNNHS---KIVVSGGKGNDE 164
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-----NIILVSS 181
++E+ L+ G+ I +E +S T++N +FS +I+ K N+ +V++
Sbjct: 165 KISEAEAMKKYLVSKGMPEGQILMENKSTTTYENFKFSKELIEEDSNKEIDEINVKVVTT 224
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
+H RS+L Q G N + S + + + + L+E
Sbjct: 225 DFHAFRSKLLAQKNGYNNVTNYSS----------ETVWYLIPVMYLRE 262
>gi|148380856|ref|YP_001255397.1| hypothetical protein CBO2900 [Clostridium botulinum A str. ATCC
3502]
gi|153931082|ref|YP_001385163.1| hypothetical protein CLB_2864 [Clostridium botulinum A str. ATCC
19397]
gi|153935289|ref|YP_001388632.1| hypothetical protein CLC_2797 [Clostridium botulinum A str. Hall]
gi|148290340|emb|CAL84464.1| putative exported protein [Clostridium botulinum A str. ATCC 3502]
gi|152927126|gb|ABS32626.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
19397]
gi|152931203|gb|ABS36702.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
Length = 197
Score = 124 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG P ++ R+ E +RLY II+SG
Sbjct: 39 QPQKSDSIIILGCKVKGNDPTPFLKR--------RLDEGLRLYNDGYGKY----IIVSGA 86
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++E+ L++ G+++ I E +S +T +N +FS +++ + I+VS+
Sbjct: 87 KGPGENISEAEAMQKYLVQKGLDKKFIIPEDKSRNTLENIKFSKKKMEDNNLSSSIIVSN 146
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHLKR++L Q GI S ++ ++ S + L+E +L+ Y +
Sbjct: 147 KYHLKRAELLCQKEGIKASYSGV-FVRSHMS--------HEIMGFLREIPALLVYYIK 195
>gi|168209230|ref|ZP_02634855.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
gi|170712695|gb|EDT24877.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
Length = 206
Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 75/193 (38%), Gaps = 22/193 (11%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+L + I +L+ F+ + + T + + KD ++LG
Sbjct: 1 MLKKKILVGLAFLIGLLILVFLIFEVFLTYKMMN--------FKDINQLKDVEYEIILGA 52
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G P ++ R+ E + + + +I+SGG + ES
Sbjct: 53 GLYGDKPSPILQ--------ERLEEGL----KYLELHPNTKVIVSGGQGSNEPIPESEAM 100
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IILVSSAYHLKRSQLYF 192
N L+ G+ + I E +S TFQN +FS +++ +++V+S +HL R++
Sbjct: 101 KNFLVNKGINPNRIIEEDKSKSTFQNLEFSKKILEERHADKDEVLIVTSDFHLFRAKEIA 160
Query: 193 QHFGINTKASCSD 205
+ I + S
Sbjct: 161 DYLNIKNEGLPSK 173
>gi|296135984|ref|YP_003643226.1| protein of unknown function DUF218 [Thiomonas intermedia K12]
gi|295796106|gb|ADG30896.1| protein of unknown function DUF218 [Thiomonas intermedia K12]
Length = 252
Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 83/239 (34%), Gaps = 12/239 (5%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+FL + + + F +LF + + L L+
Sbjct: 18 GLVFLSLFVTWRSHRFFTR-FLTYAITVLFLLASMPLFANLALGALERK-ATQEKICSPP 75
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
G + V+L G PT S R+ ++L + H+ T++ISGG
Sbjct: 76 PPGALFVVLAGGIDSNPTHAQDFSALKTASLKRLLAAVQLAQ----HTPDSTLLISGG-- 129
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ E+ + ++ G + L+T S TFQ A I LV+SA
Sbjct: 130 WGRTIREANLMGALAVQLGYPASRMILDTTSRTTFQTAVNMRERILQFPVGRRYLVTSAD 189
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSII----PLSANFYLTELALKEYIGILIAYY 238
H+ R+ + F H ++ A DY + P + T + E +G+L
Sbjct: 190 HMPRAMMAFAHERVSICAWPVDYEAIPIQALDMLNPQISALDKTTRVVHELLGMLYYRL 248
>gi|229829927|ref|ZP_04455996.1| hypothetical protein GCWU000342_02033 [Shuttleworthia satelles DSM
14600]
gi|229791225|gb|EEP27339.1| hypothetical protein GCWU000342_02033 [Shuttleworthia satelles DSM
14600]
Length = 342
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 92/241 (38%), Gaps = 37/241 (15%)
Query: 5 WIFLIVSYWHL--------LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
IF + Q+ F F+ + G+ +L L
Sbjct: 103 LIFAFFGVILIRAYGSNLYFYQNHWINIFFIFFVYSYLIFGFAFAGFMLYSIL------- 155
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
L +K + I++ G G + R+ P + RI + + YK +M +
Sbjct: 156 YLLIPKRKHYDFIIIHGAGL-----LDGERVTPLLKR--RIDKAVEAYKKSNNPNM--KL 206
Query: 117 IISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK- 174
I SGG ++E+ N LLE + ++ + LE QS T++N FS + + + +
Sbjct: 207 IASGGQGPDEKISEAQAILNYLLEETDIPKEAVLLEDQSKTTYENLLFSKRIGEKLVDQP 266
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ V++ YH+ R+ Y + GI +A +Y+ ++E+I +
Sbjct: 267 RFLFVTNDYHVFRTSTYAKKIGIKGDGLGC-----------STAGYYIPSAFIREFIALC 315
Query: 235 I 235
+
Sbjct: 316 V 316
>gi|329667272|gb|AEB93220.1| hypothetical protein LJP_0894 [Lactobacillus johnsonii DPC 6026]
Length = 346
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 82/208 (39%), Gaps = 25/208 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
++ FI II I + + L K + +V+LG G P +
Sbjct: 140 IYLFINLVIIYLIFIMMMYTLTSWINLVNIKTKKLDYVVVLGAGLMGKKVTPLL------ 193
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
+RI + +Y+ + II+SGG + E++ E G+ + DI +E
Sbjct: 194 --AARINRGIEVYR----RNPGSKIIMSGGQGPGEEIPEAVAMAKYAEEKGISKQDIIVE 247
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
+S T +N FS ++K +V+++YH+ R+ + + G+ +
Sbjct: 248 DKSKTTRENLIFSHRLMK--PDSRFAIVTNSYHVYRALVLAKRLGLQCIGYGA------- 298
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYR 239
+ ++ ++E+I L +R
Sbjct: 299 ----KTKWYFTLNAFVREFIAYLTITWR 322
>gi|239944014|ref|ZP_04695951.1| hypothetical protein SrosN15_23646 [Streptomyces roseosporus NRRL
15998]
Length = 357
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 101/239 (42%), Gaps = 28/239 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ + + L+V+ +L + F ++ ++ G + + L L +++ + +
Sbjct: 124 IFAVLALVVTADYLGGSDAYRSFILAVVLI------TGYVAFLFLCFLAYAFLYGRI--R 175
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII-ISG 120
+ D + +V+LG+G +P + SR+ +R+ + ++ +SG
Sbjct: 176 VRGDVDFVVMLGSGLIGGERVPPL-------LASRLRSGLRIQERQIARGGPAPVLLVSG 228
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NMQGKNIILV 179
G L E+ L+ G + D + E +S T +N +FS S+++ +G ++V
Sbjct: 229 GQGPDEKLPEAEAMGRWLVAEGADPDLVLEENRSRTTTENLRFSRSLMEGADEGYVCVVV 288
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ +H R+ + + G+ + S +A ++ ++E++ + +
Sbjct: 289 TNNFHAFRAAMTARKEGVRGQVIGSP-----------TAAYFWPSATIREFVAVFWEHR 336
>gi|73661853|ref|YP_300634.1| hypothetical protein SSP0544 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494368|dbj|BAE17689.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 323
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 96/239 (40%), Gaps = 41/239 (17%)
Query: 6 IFLIVSYWHLLCQSIRKIFFM----SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+F + ++ L + F+ F LF+FI + + + L
Sbjct: 94 VFTLACFYISLIPIGINVIFLWISAISFSALFTFICYMMCSSNFLNL------------N 141
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K D ++I++LG G P + SR+ + LY + I+SGG
Sbjct: 142 NKPDFDVILVLGAGIFTENVTPML--------ASRLDRALTLY----VQQPNAKFIVSGG 189
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILV 179
++E++ L+ GVE + I LE QS T +N QFS S+I++ I+ V
Sbjct: 190 QGPDEPISEALAMKRYLIHHGVESNHIMLEDQSTSTSENIQFSKSLIESHFECVPKIVCV 249
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S +H+ R+ + Q F + S ++ I +++++ ++ Y
Sbjct: 250 TSQFHIMRALRFGQKFNLKLTGVGSHTPYHFFEI-----------ALIRDFLALMYQYK 297
>gi|255327628|ref|ZP_05368694.1| conserved hypothetical protein [Rothia mucilaginosa ATCC 25296]
gi|255295302|gb|EET74653.1| conserved hypothetical protein [Rothia mucilaginosa ATCC 25296]
Length = 387
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 95/241 (39%), Gaps = 28/241 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L + I LIV + + + + F F ++ + + F+ L
Sbjct: 137 LAAGIALIVGPFFVPGPAENTPLGGVWGTIYFYF--SLVLTYFTIYAVGFTVSAVLNLVN 194
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+++ + +V+LG+G P + RI + +Y+ + +I+SGG
Sbjct: 195 FRQQADYVVVLGSGLIGDQVTPLL--------AGRIDRGIEIYR----KNPGSKLIMSGG 242
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNIIL 178
+ E + + G+ DI +E ++++T +N FS +++ + + +
Sbjct: 243 QGADEEVPEGVAMTRYAVSRGIPETDIIVEDRAVNTRENLLFSYALMPEVAEGKTPKVAV 302
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+++YHL R+ L + G+ + + + ++ ++E+IG L
Sbjct: 303 ATTSYHLFRALLLARSLGLKCWGAGA-----------RTKVYFAVNAFIREFIGYLSMTR 351
Query: 239 R 239
R
Sbjct: 352 R 352
>gi|326796792|ref|YP_004314612.1| hypothetical protein Marme_3563 [Marinomonas mediterranea MMB-1]
gi|326547556|gb|ADZ92776.1| protein of unknown function DUF218 [Marinomonas mediterranea MMB-1]
Length = 255
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
W + L+ ++ Y ++ + +++++LG+G +PA+ ++ + R
Sbjct: 53 SWSPVANRLIATVESEYSVFDIA----QPVDVVIVLGSGHNEYVNMPAV-MQLGRSAIFR 107
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ E +R+ ++ + + +SG + + +E G+ I + D
Sbjct: 108 LEEGLRILRA----NPSARLFVSGY-GAGGKTPHAEILKQAAIELGIAPTRIITFPLAKD 162
Query: 157 TFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T A+ +S +K+ + + I LV+ A HLKR+ ++++ INT + + L A S
Sbjct: 163 TEDEARMMASFLKDDKERTNNRIALVTEASHLKRAMRFYRNEDINTLPAPAFKLGASESD 222
Query: 214 IP-LSANFYLTELALKEYIGILIAYYRGN 241
+ +A Y ++ A E++G+ +
Sbjct: 223 LRITAAAAYKSQRAFYEWLGLTWQAIKSQ 251
>gi|110597106|ref|ZP_01385395.1| Protein of unknown function DUF218 [Chlorobium ferrooxidans DSM
13031]
gi|110341297|gb|EAT59762.1| Protein of unknown function DUF218 [Chlorobium ferrooxidans DSM
13031]
Length = 249
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/229 (17%), Positives = 88/229 (38%), Gaps = 19/229 (8%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ + +++ ++ T L++ ++ R +S + + +V+L +
Sbjct: 30 RRLLIGLAIMVLGMFSLPVVSTSLIRAVEGWSTRVPVSS--LHNADAVVVLSGIVVQLEG 87
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG--LAESIVYNNKLL 139
P R + L+K+ K I+ + G + E + +
Sbjct: 88 APLGEWN---DGVDRFEGGIDLFKAGK----APVIVFTRGQVPWQPDAVPEGELLAKRAT 140
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHFGI 197
GV + I L + +T A + ++ G K IILV+SA+H++R+ + F+ G
Sbjct: 141 LLGVPENAILLTAVAGNTADEAVAAGKLLGVRSGVRKKIILVTSAFHMRRAAMQFEKAGF 200
Query: 198 NTKASCSDYLNA------YYSIIPLSANFYLTELALKEYIGILIAYYRG 240
D+ +P + ++ +AL+E IG L + +G
Sbjct: 201 QVDRYPVDFQAGDNSEMTILDFLPDAGALEMSSIALREMIGWLYYWVKG 249
>gi|323704444|ref|ZP_08116023.1| protein of unknown function DUF218 [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323536510|gb|EGB26282.1| protein of unknown function DUF218 [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 194
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ I++LG PS R+ E +RLYK + II+SGG
Sbjct: 39 DAIIILGCAVY--------GKNPSPFFKERLNEAIRLYK----KGLGKYIIVSGGKGPGE 86
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
++E+ LL++G+ + I + +S T QN + S ++ K I+VS+ +HLK
Sbjct: 87 DVSEAEAGKEYLLKNGIPYNTILKDDKSYSTLQNLENSKKIMDEKSLKTAIIVSNKFHLK 146
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+ + + GIN +Y + + L+E +L Y+R
Sbjct: 147 RASIIAKEAGINA---------SYSGVFVKRYFYEEVYGFLREAPALLYMYFR 190
>gi|291458721|ref|ZP_06598111.1| putative membrane protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291418638|gb|EFE92357.1| putative membrane protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 382
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 93/233 (39%), Gaps = 25/233 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTI-LLKHLQFSYQRPLLSPQ 61
+ +IFL +LL + S F + + + L+ S L P+
Sbjct: 132 IVYIFLWPLNGYLLPSFQKHALLRSIGNACFGTLSFSAAYLLFLMAMYCLSALLNLFHPR 191
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++D + IV+LG G P + SRI +RL + +I+SGG
Sbjct: 192 KRRDLDYIVVLGAGIRGEAVTPLL--------ASRIERGIRLL----YENPRALLILSGG 239
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ + E L GV+ I E +SL+T QN FS +++ + K I +V++
Sbjct: 240 QGEGEDIPEGEAMRRYALSQGVDPGRILTEEKSLNTRQNLLFSRALMGGEKPK-IAVVTT 298
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+YH+ R+ L + I K + + ++ ++E++ L
Sbjct: 299 SYHVFRALLLARKCHIPCKGYGA-----------RTKWYFTLNALIREFLAYL 340
>gi|168186754|ref|ZP_02621389.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
gi|169295259|gb|EDS77392.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
Length = 253
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 45/230 (19%), Positives = 91/230 (39%), Gaps = 38/230 (16%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+IV ++ L +R +L I GI I+L+ L +P+ +
Sbjct: 50 VIVKSYNALNSKLR--------FVLKVCISLGIASFIILESLIIYSGISNKNPKS----D 97
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I++LG S R+ ++ + +I+SGG
Sbjct: 98 YIIVLGAAVHGD--------YMSLILKERVDRSLEYLREYPST----KVIVSGGKGPGEF 145
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---IILVSSAYH 184
+ E+ L+E+GV+ I E S T +N ++SS +I+NM + + +V++ +H
Sbjct: 146 ITEAEAMKRYLVENGVKNSQIIKEENSRTTAENFKYSSKIIENMDKERTPTVSVVTTNFH 205
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ R+++ + G+ + I + N+Y ++EY +
Sbjct: 206 MLRAKMLAKRSGLKVNGIPA------RGHISSAPNYY-----IREYFAFI 244
>gi|255527086|ref|ZP_05393975.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296188150|ref|ZP_06856542.1| hypothetical protein CLCAR_3670 [Clostridium carboxidivorans P7]
gi|255509238|gb|EET85589.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296047276|gb|EFG86718.1| hypothetical protein CLCAR_3670 [Clostridium carboxidivorans P7]
Length = 197
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/210 (24%), Positives = 80/210 (38%), Gaps = 31/210 (14%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
RK+ +L+F I I ++ + S + + I++LG
Sbjct: 3 RFRKLVLYGIGILVFLVI---IFAFQVIYFGESS---------KPEKSDCIIVLGC---- 46
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
PS R E +RL+K II+SGG Q ++E+ L
Sbjct: 47 ----KVYGSTPSPFLIWRTDEGLRLFKEGYGKY----IIVSGGKGQGESISEAEAMKRYL 98
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ GV+ I LE +S T N S S+++ K I+VS+ YHLKR+ L GI
Sbjct: 99 VSKGVDSSKIILEDKSASTMANLINSKSIMEKKNFKTAIIVSNKYHLKRASLMATQEGIK 158
Query: 199 -------TKASCSDYLNAYYSIIPLSANFY 221
K +D Y +P +Y
Sbjct: 159 ASYSGVFVKPYKTDEFVGYLREVPALMKYY 188
>gi|295425794|ref|ZP_06818475.1| integral membrane protein [Lactobacillus amylolyticus DSM 11664]
gi|295064487|gb|EFG55414.1| integral membrane protein [Lactobacillus amylolyticus DSM 11664]
Length = 366
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 94/241 (39%), Gaps = 31/241 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ W+ ++ L + + + + + ++ L+ + + +
Sbjct: 123 VVWVITLLGPAKYLPHWLNVLLTAAPTIAFYLVF---LMYNYLVNSILYQFV------PR 173
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH-CTIIISGG 121
+ + + +++LG G I R+ P RI ++ + II+SGG
Sbjct: 174 RYNQDYLIVLGAGL-----INGERVTPLL--AGRINRAIQFAQKQVDKGRKMPKIIMSGG 226
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIIL 178
++E+ N + G++RDD+ LE +S +T+QN +S + G
Sbjct: 227 RGGDEKISEAQAMMNYAISRGIKRDDLLLEDKSENTYQNMLYSKRVATKDFGSDKFKAKF 286
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S+ YH+ R+ LY + G+ S + ++L ++E+ G+ + +
Sbjct: 287 FSNNYHIFRAALYAKKVGLRANGVGS-----------YTRFYFLPNAIIREFAGVFVMHK 335
Query: 239 R 239
+
Sbjct: 336 K 336
>gi|83748341|ref|ZP_00945365.1| Integral membrane protein [Ralstonia solanacearum UW551]
gi|207723927|ref|YP_002254325.1| hypothetical protein RSMK01443 [Ralstonia solanacearum MolK2]
gi|83724963|gb|EAP72117.1| Integral membrane protein [Ralstonia solanacearum UW551]
gi|206589134|emb|CAQ36096.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 265
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 49/246 (19%), Positives = 102/246 (41%), Gaps = 14/246 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ + + W + + + + +++ +L + L + Q
Sbjct: 22 LVLALLAGMVAWRMPRRRRPAGWVLGIALIVAWLAATPWCGRLLASWTHPAQPVRLDALQ 81
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+G +VLLG + A + E + S + T+ Y + H+ ++ +GG
Sbjct: 82 PHGEG-AVVLLGGSRKLAAREYAGQGETALSGLS-LERTV--YAARLAHAARLPVLATGG 137
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
P+ G+ E+ + + + G +D +E +S T +NA FS+ M++ + I LV+
Sbjct: 138 APEGRGVPEAELMGRLVADLG--QDARWIEARSATTEENAAFSAPMLRAAGIQRIYLVTH 195
Query: 182 AYHLKRSQLYFQHFGINTKASCSDY--------LNAYYSIIPLSANFYLTELALKEYIGI 233
+H+ R++ YF+ G+ + + S++P + LT AL+E +G
Sbjct: 196 YWHMARARRYFEGQGLIVTPAPCGWGGELEERPAGGILSLLPRTDGLALTRSALREALGQ 255
Query: 234 LIAYYR 239
L R
Sbjct: 256 LWLSMR 261
>gi|239990469|ref|ZP_04711133.1| hypothetical protein SrosN1_24383 [Streptomyces roseosporus NRRL
11379]
gi|291447482|ref|ZP_06586872.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291350429|gb|EFE77333.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 336
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 101/239 (42%), Gaps = 28/239 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ + + L+V+ +L + F ++ ++ G + + L L +++ + +
Sbjct: 103 IFAVLALVVTADYLGGSDAYRSFILAVVLI------TGYVAFLFLCFLAYAFLYGRI--R 154
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII-ISG 120
+ D + +V+LG+G +P + SR+ +R+ + ++ +SG
Sbjct: 155 VRGDVDFVVMLGSGLIGGERVPPL-------LASRLRSGLRIQERQIARGGPAPVLLVSG 207
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NMQGKNIILV 179
G L E+ L+ G + D + E +S T +N +FS S+++ +G ++V
Sbjct: 208 GQGPDEKLPEAEAMGRWLVAEGADPDLVLEENRSRTTTENLRFSRSLMEGADEGYVCVVV 267
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ +H R+ + + G+ + S +A ++ ++E++ + +
Sbjct: 268 TNNFHAFRAAMTARKEGVRGQVIGSP-----------TAAYFWPSATIREFVAVFWEHR 315
>gi|253730030|ref|ZP_04864195.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726243|gb|EES94972.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
Length = 171
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G P + +R+ + +Y+ + II+SGG ++E
Sbjct: 1 MLGAGIFTEFVTPML--------AARLDRALDIYQQQASAT---KIIVSGGQGPDEPISE 49
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNIILVSSAYHLKRS 188
++ L+ GV++ DI +E+ S++T+ N +S +I N + I+ V+S +H+ R+
Sbjct: 50 ALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIVCVTSQFHVLRA 109
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
Q G++ S + + + +K+Y+G++ Y
Sbjct: 110 LRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQYR 148
>gi|251792809|ref|YP_003007535.1| molybdate ABC transporter permease [Aggregatibacter aphrophilus
NJ8700]
gi|247534202|gb|ACS97448.1| molybdate ABC transporter permease protein [Aggregatibacter
aphrophilus NJ8700]
Length = 248
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 18/179 (10%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ IVLLG G + A S + E +R Y + Q ++ISG
Sbjct: 77 RQAQAIVLLGGGVRDSKELYAP-----LASSAVQLERLR-YAAYLQKETQLPLLISG--V 128
Query: 124 QKHGLAESIV-YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
G +E+ V V LE +SL T +NA F+ +++ IILV++
Sbjct: 129 SPTGASEAKVSMQELQDFFNVPTQ--WLEEKSLTTKENALFTRQLLEKEGINKIILVTNE 186
Query: 183 YHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+H++R++L F+ G + ++Y IP + LKE++G L
Sbjct: 187 WHMQRAKLLFEEQGFQVLPASVGEGVTPTEYKLNMMHFIPQAGAMAKNMQLLKEWLGYL 245
>gi|322807220|emb|CBZ04794.1| hypothetical protein H04402_02990 [Clostridium botulinum H04402
065]
Length = 197
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + I++LG P ++ R+ E + LY II+SG
Sbjct: 39 QPQKSDSIIILGCKVKGNDPTPFLKR--------RLDEGLGLYNEGYGKY----IIVSGA 86
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++E+ L++ G+++ I LE +S +T +N +FS +++ + I+VS+
Sbjct: 87 KGPGENISEAEAMQKYLVQKGLDKKFIILEDKSRNTLENIKFSKKKMEDNNLSSSIIVSN 146
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHLKR++L Q GI S ++ ++ S + L+E +L+ Y +
Sbjct: 147 KYHLKRAELLCQKEGIKASYSGV-FVRSHMS--------HEIMGFLREIPALLVYYIK 195
>gi|229827667|ref|ZP_04453736.1| hypothetical protein GCWU000182_03056 [Abiotrophia defectiva ATCC
49176]
gi|229788127|gb|EEP24241.1| hypothetical protein GCWU000182_03056 [Abiotrophia defectiva ATCC
49176]
Length = 319
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 94/224 (41%), Gaps = 29/224 (12%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
++ Q+ F + + G+ LL L +++ K+ + I++ G
Sbjct: 97 YIFYQNPWLNIFFIFVIYSYIIFGFAFAG-FLLYSLLYNF------IPKGKNYDFIIIHG 149
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + R+ P + RI + + +K K + + +I SGG ++E+
Sbjct: 150 AGL-----LNGERVTPLLKR--RIDKAVEAFK--KSRNSNIKLIASGGQGADEKISEARA 200
Query: 134 YNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILVSSAYHLKRSQLY 191
N L+E V + + +E QS T+QN FS + +++ + + V++ YH+ R+ Y
Sbjct: 201 IFNYLMEETDVPGEAVLMEDQSKTTYQNLLFSKKLGESLVENPRFLFVTNDYHVFRTSTY 260
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ GI +A++YL ++EY+ + +
Sbjct: 261 AKKIGIRGDGLGC-----------STASYYLPSAFIREYVALCV 293
>gi|326406078|gb|ADZ63149.1| conserved hypothetical protein [Lactococcus lactis subsp. lactis
CV56]
Length = 341
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 72/191 (37%), Gaps = 28/191 (14%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y +K + I++LG+G P ++ SR+ + + Y+ +
Sbjct: 153 YSWMSQMIPLQKKIDYIIILGSGVRSEEVPPLLK--------SRLDKGIEYYQ----KNP 200
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG ++E+ L + I E +S T++N FS +I
Sbjct: 201 TAKFVVSGGQGADEPVSEAFAMRKYLHSQNIPNHQILFEDKSTTTYENMLFSKRIINEDW 260
Query: 173 GKN-----IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
II ++ YH+ R LY Q + + + +A ++L +
Sbjct: 261 SDKEMLPSIIFSTNNYHVLRGSLYAQRVKLKAQGVGAP-----------TALYFLPTALI 309
Query: 228 KEYIGILIAYY 238
+EYI +L+
Sbjct: 310 REYIALLLHRK 320
>gi|313677361|ref|YP_004055357.1| hypothetical protein Ftrac_3275 [Marivirga tractuosa DSM 4126]
gi|312944059|gb|ADR23249.1| protein of unknown function DUF218 [Marivirga tractuosa DSM 4126]
Length = 239
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/247 (20%), Positives = 95/247 (38%), Gaps = 17/247 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M + I L + + + + + LF + LK + + L
Sbjct: 1 MPATLIGLAWLAFFIFRKWKFRKYLAILGFALFIIFTNDFLANWFLK--AWQTEAANLES 58
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ VLL T + P R+ + + RI + + L++ + T+ ISG
Sbjct: 59 IKNQKFTYGVLLTGMTNTLKE-PKDRVYFNQNA-DRILQAIMLHQQ----GIIDTLYISG 112
Query: 121 GDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
G + L E+ V +N L D + LE QS +T ++A+F+S+ I + I+L
Sbjct: 113 GGATALRKDLQEARVISNYLESIQFPMDKVILEDQSRNTVESARFASAYISSQ--TEILL 170
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY-----SIIPLSANFYLTELALKEYIGI 233
++SA H+ R+ F+ + + +L +P + KE++G
Sbjct: 171 ITSASHMPRALGCFKKEDFRVQPYPTVFLTNDEMINPSMFLPSDDALLKWNILFKEWMGY 230
Query: 234 LIAYYRG 240
+ G
Sbjct: 231 SAYWIAG 237
>gi|303242994|ref|ZP_07329449.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
gi|302589462|gb|EFL59255.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
Length = 263
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/231 (17%), Positives = 88/231 (38%), Gaps = 41/231 (17%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
F I ++ + KI +S F++ F I I T+ D
Sbjct: 60 FSISKIQNIFLRRSIKI-GISAFIISFILIEGLIFATV--------------RADNYTDV 104
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ +++LG G E S R+ + + K ++++GG
Sbjct: 105 DYVIILGGGVK--------GGELSKTLQFRLDKGIEFLKEH----PDLKVVVTGGKGFGE 152
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVSSAY 183
++E N LL++ + D I +E+++ T +N +++ +++ GK +++++S +
Sbjct: 153 TISEGEAMCNYLLQNNIPEDKIIVESEATSTMENFKYTKQILEKQTGKSNYKVMVITSDF 212
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
H+ RS++ G S + + P ++EY +
Sbjct: 213 HMLRSKILASFNGFTPYGIPS---KTWIGVFP--------NCVIREYFAVF 252
>gi|302342876|ref|YP_003807405.1| hypothetical protein Deba_1443 [Desulfarculus baarsii DSM 2075]
gi|301639489|gb|ADK84811.1| protein of unknown function DUF218 [Desulfarculus baarsii DSM 2075]
Length = 270
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 80/202 (39%), Gaps = 19/202 (9%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNI--IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
LL L+ P P IV+LG A R+ S S R+ E +R
Sbjct: 65 LLAPLERQ-AGPYAQPMALMAAGAMDIVVLGGAQQAGELSAADRL--SAASLRRVAEGVR 121
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
L++ +I SG + + + G I ++ S DT A
Sbjct: 122 LWRGV----PGARLIFSG-EASDGRSSVAADMAEMATRLGAPSASIVVDEASRDTADQA- 175
Query: 163 FSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPL 216
+ + +++ + LV+SA H+ R+ F+ G+ + +D+ AY +P
Sbjct: 176 --AILARDLGARPFALVTSAAHMPRALTMFRAQGLRPLPAPADFRCATGDDPAYRRFMPQ 233
Query: 217 SANFYLTELALKEYIGILIAYY 238
+ +++ A+ EY+G++ A+
Sbjct: 234 AQGLLMSQDAIYEYLGLMWAWL 255
>gi|56476708|ref|YP_158297.1| hypothetical protein ebA2301 [Aromatoleum aromaticum EbN1]
gi|56312751|emb|CAI07396.1| probable transmembrane protein [Aromatoleum aromaticum EbN1]
Length = 258
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 21/209 (10%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
W +L L+ P L+ + IV++G G + R+
Sbjct: 61 WPATVGWMLAGLETD---PPLTATSARPAEAIVIVGGGKRRHAPEYGGETVNRL-TLERL 116
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG--VERDDIKLETQSL 155
RL H + +++SGG P E + L + R +E SL
Sbjct: 117 RYGARLA-----HGLRLPVLVSGGAPTGE-RPEGELMKAALETDFGIIPR---WVEASSL 167
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY----- 210
DT QNA+FS+ ++K + ++LV+ A H++R++ F+ GI A+ + +L +
Sbjct: 168 DTGQNAEFSAPLLKAAGVRRVLLVTHAAHMRRARAEFEARGIEVIAAPTAWLGRHDANDQ 227
Query: 211 -YSIIPLSANFYLTELALKEYIGILIAYY 238
+ +P + + Y A E++G+L
Sbjct: 228 VLTALPSATSAYAGWYAAHEWLGLLALRL 256
>gi|218288615|ref|ZP_03492892.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
gi|218241272|gb|EED08447.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
LAA1]
Length = 199
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 83/215 (38%), Gaps = 26/215 (12%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG--NIIVLLGNGTTIIPTIPAIR 86
L + G+ L L +R + + ++ V+LG
Sbjct: 2 AWLWMCLLACGVAALGSLAFLLRFAERLKHEGRSHRPQKSDVGVVLGA--------YTDG 53
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
EPS +R+ + LY+ + II+SGG + ++E+ L+ +G+ D
Sbjct: 54 YEPSHPLVARLRAAIALYRQGYIRA----IIVSGGQGENETVSEARSMKRFLVMNGIPAD 109
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+ E S +T++N SS+++++ + ++++S YHL R+ + G++ +
Sbjct: 110 AVHEERMSTNTWENLYHSSAIMRDRGYRTAVIITSDYHLPRALAVARMLGMDATGCGAAS 169
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ A++E + RG
Sbjct: 170 TKGEFR------------AAVREVFAHIEYMLRGR 192
>gi|168217115|ref|ZP_02642740.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
gi|182624176|ref|ZP_02951962.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|177910590|gb|EDT72958.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|182380858|gb|EDT78337.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
Length = 257
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 45/243 (18%), Positives = 100/243 (41%), Gaps = 33/243 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L + ++ + + ++ + + + + I I I+++ Y + L P
Sbjct: 38 LILGVVIILYTLFINKLLKLQWFKKVYKPIKILALICISIF--IIVEGAIIFYPKKSLKP 95
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+LG G +R R+ +T+ + + I++SG
Sbjct: 96 -----CDYIVVLGAGIRGENLTATLR--------DRLDKTIEYLEKTGFNGE---IVVSG 139
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN----- 175
G + E+ L+E+GV +D I LE ++ T++N +S +I+N+ GK
Sbjct: 140 GQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKIIENLSGKPIKDLD 199
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I++V++ +H RS L + G N + + + + + +E+
Sbjct: 200 ILVVTTDFHAMRSNLLAKRNGYNNIDLYTS----------KTQWYLVPSMYAREFFAFCK 249
Query: 236 AYY 238
+Y+
Sbjct: 250 SYF 252
>gi|116629737|ref|YP_814909.1| hypothetical protein LGAS_1098 [Lactobacillus gasseri ATCC 33323]
gi|238853386|ref|ZP_04643765.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
gi|282851809|ref|ZP_06261172.1| putative membrane protein [Lactobacillus gasseri 224-1]
gi|311110620|ref|ZP_07712017.1| putative membrane protein [Lactobacillus gasseri MV-22]
gi|116095319|gb|ABJ60471.1| hypothetical protein LGAS_1098 [Lactobacillus gasseri ATCC 33323]
gi|238833958|gb|EEQ26216.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
gi|282557051|gb|EFB62650.1| putative membrane protein [Lactobacillus gasseri 224-1]
gi|311065774|gb|EFQ46114.1| putative membrane protein [Lactobacillus gasseri MV-22]
Length = 342
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 91/230 (39%), Gaps = 25/230 (10%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ + L + ++ + L+ F+ +I I + + L K N I
Sbjct: 118 IIAYLFLFPIVGRLTRNNFGTYLYLFVNLTVIYLIFIMMMYTLTSWINLINFKTKKLNYI 177
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG G P + +RI + +Y+ ++ II+SGG +
Sbjct: 178 VVLGAGLIGKKVTPLL--------AARINRGIEVYR----NNPGSKIIMSGGQGPGEEIP 225
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E++ E G+ DI +E +S T QN FS ++K+ +V+++YH+ R+
Sbjct: 226 EAVAMAKYAEEKGISNQDIIVEDKSKTTRQNLAFSHKLMKSN--SRFAIVTNSYHVYRAL 283
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + G++ + + ++ ++E+I L +R
Sbjct: 284 VLAKRMGLDCIGYGA-----------KTKWYFTLNAFVREFIAYLTITWR 322
>gi|257789846|ref|YP_003180452.1| hypothetical protein Elen_0069 [Eggerthella lenta DSM 2243]
gi|257473743|gb|ACV54063.1| protein of unknown function DUF218 [Eggerthella lenta DSM 2243]
Length = 333
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 81/204 (39%), Gaps = 33/204 (16%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
S++ + +L L + ++D + IV+ G G + P +
Sbjct: 133 SYVAFTFAALLLYSWLYRRLPK-------RRDYDYIVVHGAGLSGTKPTPLL-------- 177
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLET 152
+R+ + + L+++ + II SGG ++E+ L+E GV D + E
Sbjct: 178 AARLDKAVELWEADHRR---AVIIASGGQGADEEVSEAEAMRTYLVEERGVPADAVIEEN 234
Query: 153 QSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+S T +N + S +++ G +V+S YH+ R+ Y G+ S
Sbjct: 235 RSTTTMENLRNSKAIMDARSGAGAYRAAVVTSDYHVFRTAEYAHKIGLAADGVGS----- 289
Query: 210 YYSIIPLSANFYLTELALKEYIGI 233
+A ++ ++EY+ +
Sbjct: 290 ------RTARYFWPTAFIREYVAV 307
>gi|300361824|ref|ZP_07058001.1| conserved hypothetical protein [Lactobacillus gasseri JV-V03]
gi|300354443|gb|EFJ70314.1| conserved hypothetical protein [Lactobacillus gasseri JV-V03]
Length = 342
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 45/230 (19%), Positives = 90/230 (39%), Gaps = 25/230 (10%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ + L + ++ + L+ F+ II I + + L K N I
Sbjct: 118 IIAYLFLFPVVGRLTRNNFGTYLYLFVNLTIIYLIFIMMMYTLTSWINLINFKIKKLNYI 177
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG G P + +RI + +Y+ ++ II+SGG +
Sbjct: 178 VVLGAGLIGKKVTPLL--------AARINREIEIYR----NNPGSKIIMSGGQGPGEEIP 225
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E+ E G+ + DI +E +S T QN FS ++K +V+++YH+ R+
Sbjct: 226 EAAAMAKYAEEKGISKQDIIVEDKSKTTRQNLAFSHKLMKA--DSRFAIVTNSYHVYRAL 283
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + G++ + + ++ ++E+I L +R
Sbjct: 284 VLAKRMGLDCIGYGA-----------KTKWYFTLNAFVREFIAYLTITWR 322
>gi|302333991|gb|ADL24184.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 171
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 24/170 (14%)
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G P + +R+ + +Y+ + II+SGG + E
Sbjct: 1 MLGAGIFTEFVTPML--------AARLDRALDIYQQQASAT---KIIVSGGQGPDEPIPE 49
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNIILVSSAYHLKRS 188
++ L+ GV++ DI +E+ S++T+ N +S +I N + I+ V+S +H+ R+
Sbjct: 50 ALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINNLYHEAVKIVCVTSQFHVLRA 109
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
Q G++ S + + + +K+Y+G++ Y
Sbjct: 110 LRLAQKLGLSIDGVGSH-----------TPYHFFLHVLIKDYLGVMYQYR 148
>gi|110800807|ref|YP_695894.1| hypothetical protein CPF_1451 [Clostridium perfringens ATCC 13124]
gi|110675454|gb|ABG84441.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
Length = 257
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 48/247 (19%), Positives = 101/247 (40%), Gaps = 33/247 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L + ++ + + ++ + M + + I I I+++ Y + L P
Sbjct: 38 LILGVVIILYTLFINKLLKLQWFKTVYKPMKILALICISIF--IIVEGAIIFYPKKSLKP 95
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+LG G +R R+ +T+ + + I++SG
Sbjct: 96 -----CDYIVVLGAGIRGENLTATLR--------DRLDKTIEYLEKTGFNGE---IVVSG 139
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN----- 175
G + E+ L+E+GV +D I LE ++ T++N +S +I+N+ GK
Sbjct: 140 GQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKIIENLSGKPIKDLD 199
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I++V++ +H RS L + G N Y + + + + +E+
Sbjct: 200 ILIVTTDFHAMRSNLLAKRNGYN----------KAYLYTSKTQWYLVPSMYAREFFAFCK 249
Query: 236 AYYRGNR 242
+Y+ R
Sbjct: 250 SYFLDKR 256
>gi|28377368|ref|NP_784260.1| integral membrane protein [Lactobacillus plantarum WCFS1]
gi|28270200|emb|CAD63099.1| integral membrane protein [Lactobacillus plantarum WCFS1]
Length = 340
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 79/181 (43%), Gaps = 20/181 (11%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIIISGG 121
+ + +++LG G +P+ R+ + Y+ + TI++SGG
Sbjct: 159 HRQIDYMIVLGAGL-------MPNGQPTRTLAYRLQAAAKYYRVQRARYHQPITIVVSGG 211
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNIILVS 180
+AES L++ GV RD I+ E +S T +N +FS + +++ ++V+
Sbjct: 212 QGPDEVMAESTAMRQYLVDQGVPRDAIQEENRSTSTIENLKFSHALIVRQQPFYRAVIVT 271
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
S YH+ R+ ++ + +N + + +YL +EY+ +++ Y
Sbjct: 272 SGYHVLRANIFARQLHLNLTGIGAH-----------TPLYYLPFAMFREYLALIVMYRWA 320
Query: 241 N 241
N
Sbjct: 321 N 321
>gi|188588528|ref|YP_001921214.1| GdmH [Clostridium botulinum E3 str. Alaska E43]
gi|188498809|gb|ACD51945.1| conserved hypothetical protein [Clostridium botulinum E3 str.
Alaska E43]
Length = 253
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
FI G++ ++ + S + K++ + IV+LG G + S+
Sbjct: 66 FFICIGLVLFFAIEVVIISCPK-----SNKENTDYIVVLGAGLNNGD-------QLSYIL 113
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
SR+ ++ K +S II+SGG ++E++ LLE G+ D I +E Q
Sbjct: 114 KSRLDSALQCINKFKNNSY---IIVSGGKGNDERISEAMAMKKYLLEQGISEDKILMEDQ 170
Query: 154 SLDTFQNAQFSSSMIKNMQGKN-----IILVSSAYHLKRSQLYFQHFGIN 198
S +TF+N ++S +I+ KN + +V++ +H RS++ + G N
Sbjct: 171 SKNTFENFKYSKKLIEEQSNKNIDDLSVKIVTTDFHGFRSKMLAKRNGYN 220
>gi|329298742|ref|ZP_08256078.1| hypothetical protein Pstas_23624 [Plautia stali symbiont]
Length = 156
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 64/154 (41%), Gaps = 13/154 (8%)
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
R+ E + ++ Q M I +G + + + V + GV D I + Q
Sbjct: 1 MPRVTEGVCQWRRYPQAKM----IFTGAAAGYNPRSNASVAADVARSLGVPDDAIIVLDQ 56
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL------ 207
DT + A I + +LV+SA HL R+ +FQ G+N + ++ L
Sbjct: 57 PHDTGEEALAVKQTIGQ---QPFLLVTSANHLPRAMHFFQSAGLNPLPAPANQLAITSPI 113
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + +P ++ A+ E +G++ RG+
Sbjct: 114 SVWDRTLPSLLWLSHSQRAVYETLGLIWQRLRGS 147
>gi|300786369|ref|YP_003766660.1| hypothetical protein AMED_4488 [Amycolatopsis mediterranei U32]
gi|299795883|gb|ADJ46258.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length = 329
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 95/220 (43%), Gaps = 30/220 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
++ ++L + G+ + ++ Y + + I++LG G
Sbjct: 120 RWGSALVAIAVVLGGYFGFLFLSLLV-------YSVVYSRIGRRGGFDAIIVLGCG---- 168
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ R+ P R+ +RL+ + + +++SGG ++E+ + L
Sbjct: 169 --LDGERVPPLL--AGRLERAIRLHDREPEPPL---LVVSGGRGPGETVSEAEAMHAYLR 221
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ G+ D I+ E ++ T +N +FS+ ++ + ++ V+S+YH+ R+ + + G+
Sbjct: 222 DRGIPDDHIRREDRARTTEENLRFSADLL-PAGARRVVAVTSSYHVFRAAVECRRLGLPF 280
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A+ + +A ++L L+E+ +++ Y R
Sbjct: 281 HATGAP-----------TARYFLPSALLREFAALILHYRR 309
>gi|223986622|ref|ZP_03636616.1| hypothetical protein HOLDEFILI_03938 [Holdemania filiformis DSM
12042]
gi|223961417|gb|EEF65935.1| hypothetical protein HOLDEFILI_03938 [Holdemania filiformis DSM
12042]
Length = 363
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 46/247 (18%), Positives = 95/247 (38%), Gaps = 34/247 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL W + + H +L+ ++ + + +L S+ L P+
Sbjct: 113 LLGWFVIPMGLSHSQSLPWILNLAFLAGAVLYLYLIFTFV-----CYLVSSWLFKLNRPR 167
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH-------- 113
+ + +++LG T P ++ R + Y+ +
Sbjct: 168 LNQ--DFLIILGCKVTEQGLTPLLKQ--------RCDRALAFYRRQEAKKTRFFPGRKKE 217
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I SGG AE+ V + LLE GV I++E QS++T++N FS ++ +M+
Sbjct: 218 LILIPSGGQGPDEPRAEAEVMKDYLLEQGVPEVRIRVENQSVNTYENMVFSKKIMDSMKK 277
Query: 174 K-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+ +S YH+ R+ L + GI I + ++ ++EY+
Sbjct: 278 NYKCLFCTSDYHVFRAGLLSRKAGI----------RRCSGIGSRTVAYFSYNAFIREYVA 327
Query: 233 ILIAYYR 239
++ + +
Sbjct: 328 AMVMHKK 334
>gi|33152025|ref|NP_873378.1| hypothetical protein HD0881 [Haemophilus ducreyi 35000HP]
gi|33148247|gb|AAP95767.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 248
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 46/238 (19%), Positives = 84/238 (35%), Gaps = 18/238 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ ++LI + F + + + T L L + LS
Sbjct: 18 IALLWLISLLFAYFNYKKLSYCFTAFGIFMLYLFSTPYFATKLGNSLVIA---DQLSLAD 74
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG G + A E MR Y + Q ++ +G
Sbjct: 75 YQTAQAIVVLGGGIRDSQELFAPISTNGTTF-----ERMR-YAAYLQKQTGLPLLATGSA 128
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ +E+ + + + LE + T +NAQFS ++ N IILV+
Sbjct: 129 INGN--SEANIMAKEF-AQFFAVETSWLEENAKTTQENAQFSYEILANANINKIILVTHQ 185
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNA------YYSIIPLSANFYLTELALKEYIGIL 234
+H++R++ F+ G + Y + IP S + KE++G L
Sbjct: 186 WHMQRAKKLFEQQGFKVLPASVGYGVTPNVYFDFSYFIPQSGAMDSVMQSFKEWLGYL 243
>gi|17546687|ref|NP_520089.1| hypothetical protein RSc1968 [Ralstonia solanacearum GMI1000]
gi|17428986|emb|CAD15670.1| probable transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 265
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 95/248 (38%), Gaps = 17/248 (6%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L L + + + L+ +++ LL L
Sbjct: 21 PLVLALLAGTVAWRVPRWRCPACRGLGIALIAAWVAATPWCGRLLASWTHPAPPLRLDAL 80
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIE--PSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ +VLLG + A + S S R +Y + + H ++ +
Sbjct: 81 QPQGEGAVVLLGGSRKLAAREYAGQGATALSGPSLER-----TVYAARLARAAHLPVLAT 135
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG P+ +G+ E+ + + + G +D +ET+S T +NA FS+ M++ + I LV
Sbjct: 136 GGAPEGNGVPEAELMRRLVADMG--QDARWIETRSATTEENAAFSAPMLRAAGIRRIYLV 193
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDY--------LNAYYSIIPLSANFYLTELALKEYI 231
+ +H+ R++ YF+ G + + S++P + LT AL+E +
Sbjct: 194 THYWHMARARRYFEGQGFTVTPAPCGWGGEVEESPAGGILSLLPRTDGLMLTRFALREAL 253
Query: 232 GILIAYYR 239
G L R
Sbjct: 254 GQLWLSIR 261
>gi|300769627|ref|ZP_07079511.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308179587|ref|YP_003923715.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|300492780|gb|EFK27964.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045078|gb|ADN97621.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 340
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 79/181 (43%), Gaps = 20/181 (11%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC-TIIISGG 121
+ + +++LG G +P+ R+ + Y+ + TI++SGG
Sbjct: 159 HRQIDYMIVLGAGL-------MPNGQPTRTLAYRLQTAAKYYRVQRARYHQPITIVVSGG 211
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNIILVS 180
+AES L++ GV RD I+ E +S T +N +FS + +++ ++V+
Sbjct: 212 QGPDEVMAESTAMRQYLVDQGVPRDAIQEENRSTSTIENLKFSHALIVRQQPFYRAVIVT 271
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
S YH+ R+ ++ + +N + + +YL +EY+ +++ Y
Sbjct: 272 SGYHVLRANIFARQLHLNLTGIGAH-----------TPLYYLPFAMFREYLALIVMYRWA 320
Query: 241 N 241
N
Sbjct: 321 N 321
>gi|269792163|ref|YP_003317067.1| hypothetical protein Taci_0549 [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269099798|gb|ACZ18785.1| protein of unknown function DUF218 [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 262
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 44/249 (17%), Positives = 100/249 (40%), Gaps = 26/249 (10%)
Query: 2 LLSWIFLIVSYWHLLC---QSIRKIFFMSCFM--LLFSFIGWGIIPTILLKHLQFSYQRP 56
+ IF++ LC Q R ++C + ++ L+ Y+
Sbjct: 16 VPPGIFVLACLLMALCCLRQPRRWGLLLACLATGIAIYSASCDWSARLITGPLEDMYE-- 73
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
S D +IVLLG G + ++ R+ + ++L++ I
Sbjct: 74 --SHPLPTDDGVIVLLGGGVRYDRDLKPYQLGNYTSV--RVLKALQLHRD-----TGWPI 124
Query: 117 IISGGDPQKHG---LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+ GG+P+ +E+ + L++ G + E +S T++N + +++ +
Sbjct: 125 VCCGGNPRLDPDPEASEANLMAQTLMDMG--ATQVYREGRSRTTWENLVNALPILRRLNR 182
Query: 174 KNIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIP---LSANFYLTELALK 228
+N+++V+S++H+ R+ + + G + + L + P L + T L L+
Sbjct: 183 RNVVIVTSSFHMPRAIMTARAVLKGFDVYPHQAGRLTDRSPMDPISFLPLSMSETCLGLR 242
Query: 229 EYIGILIAY 237
E++G+
Sbjct: 243 EWVGMGAYR 251
>gi|325680889|ref|ZP_08160426.1| putative membrane protein [Ruminococcus albus 8]
gi|324107353|gb|EGC01632.1| putative membrane protein [Ruminococcus albus 8]
Length = 497
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 73/177 (41%), Gaps = 20/177 (11%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH-SMHCTIIISGGDP 123
D +++LG + T P R+ + + K + SGG
Sbjct: 317 DKTHVMILGCAISDDGT-------PLPLLAGRVDRAIEFANAQKAATGKGIKFVPSGGQG 369
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILVSSA 182
++E+ L+ G+ DDI E +S +T +N +FS I+ + I+ +S
Sbjct: 370 SDEVISEAESMRRYLISKGISDDDIIAEDKSANTEENMRFSLEKIRADCEEPKIVFSTSN 429
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YH+ RS + ++ G++ S + ++ A++E++G+L++ +
Sbjct: 430 YHVLRSGIISKNEGLDADGVGS-----------KTRWYFWPNAAVREFVGLLVSKKK 475
>gi|295112887|emb|CBL31524.1| Uncharacterized conserved protein [Enterococcus sp. 7L76]
Length = 371
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 28/212 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFML---LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ LL + ++ F+L F F + + T+ + + +P K
Sbjct: 171 FFFQSLLPTWLSLPLTIAPFILTYFAFVFYNFLTVSTL------YQFNQP------KYTQ 218
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIISGGDPQK 125
+ IV+LG+G +P + +RI + ++ YK+ + +++ I++SGG
Sbjct: 219 DYIVVLGSGLINGEIVPPL-------LQARINKAIQFYKAQNRATLNPPKIVMSGGQGPD 271
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNI--ILVSSA 182
L ES+ L G+ DDI +E S +T +N +FS MI++ N I ++
Sbjct: 272 ELLPESVAMKMYALTQGIPDDDILVEAHSKNTLENMRFSKETMIEDFGNANFQAIFTTNN 331
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
YHL R+ L+ + G+ + A+Y +
Sbjct: 332 YHLFRAGLFARMAGLKADGIGAK--TAFYFYL 361
>gi|301156135|emb|CBW15606.1| conserved inner membrane protein [Haemophilus parainfluenzae T3T1]
Length = 247
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 56/247 (22%), Positives = 97/247 (39%), Gaps = 27/247 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ W ++ + + +I F LL+ + +L L L+
Sbjct: 18 ILILWGLSLILAKFNF-KKLSRISTALGFSLLY-LLSIPYTAQVLKDSLITE---DHLTL 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + IVLLG G + A S + E +R Y + Q H ++I+G
Sbjct: 73 QDYQQAQAIVLLGGGLRDSKELYAP-----LASTAIQLERLR-YAAFLQKETHLPLLITG 126
Query: 121 GDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
P G E+ + +L V +E ++L T +NA F+ M++ IILV
Sbjct: 127 ASP--TGAIEAKIAAEELQNFFNVPTK--WIEPKALTTKENALFTKQMLEKEGIHKIILV 182
Query: 180 SSAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++ +H++R++L FQ G + + Y IP LKE+IG
Sbjct: 183 TNEWHMQRAKLLFQQQGFDVLPASVGEGITPDSYGLNMMHFIPQGGAITKNMQLLKEWIG 242
Query: 233 ILIAYYR 239
Y++
Sbjct: 243 ----YWK 245
>gi|289549962|ref|YP_003470866.1| hypothetical protein SLGD_00591 [Staphylococcus lugdunensis
HKU09-01]
gi|289179494|gb|ADC86739.1| hypothetical protein SLGD_00591 [Staphylococcus lugdunensis
HKU09-01]
Length = 334
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 51/244 (20%), Positives = 105/244 (43%), Gaps = 34/244 (13%)
Query: 2 LLSWIFLIVSYW---HLLCQSIRKIFFMSCF--MLLFSFIGWGIIPTILLKHLQFSYQRP 56
L WI ++++ + ++ + K F++ L+F++ I+ LL +
Sbjct: 97 LAMWIVILIALFPVSFIVNNDVSKYIFVTYLFTTLIFTYFFGLILSCWLLAIFYSTLNS- 155
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
K +I ++LG+G P + SRI + +Y+ KQ++
Sbjct: 156 ------NKSIDIFLVLGSGLINNKVTPLL--------ASRINAGLEIYQ--KQNNKQHLF 199
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--K 174
++SGG ES+ L++ G+ D+I E QS T++N FS MI+N+
Sbjct: 200 LVSGGQGDDELRPESVAMKEYLVDKGIVEDEIICEQQSKTTYENLYFSKKMIENLPLNKP 259
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
NI++ ++ +H+ R+ + +YS+ + +++ T ++E I I+
Sbjct: 260 NILICTNDFHILRAMFLAKKLHFK----------NFYSVGSKTKSYFFTNAFIREVIAII 309
Query: 235 IAYY 238
+
Sbjct: 310 KMDW 313
>gi|110800413|ref|YP_695257.1| hypothetical protein CPF_0806 [Clostridium perfringens ATCC 13124]
gi|110675060|gb|ABG84047.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
Length = 206
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 14/147 (9%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ KD ++LG G P ++ R+ E + + + +I+SG
Sbjct: 39 KQLKDVEYEIILGAGLYGDKPSPILQ--------ERLEEGL----KYLELHPNTKVIVSG 86
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IIL 178
G + ES N L+ G+ + I E +S TFQN +FS +++ +++
Sbjct: 87 GQGSNEPIPESEAMKNFLVNKGINPNRIIEEDKSKSTFQNLEFSKKILEERHADKDEVLI 146
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSD 205
V+S +HL R++ + I + S
Sbjct: 147 VTSDFHLFRAKEIADYLNIKNEGLPSK 173
>gi|332662639|ref|YP_004445427.1| hypothetical protein Halhy_0646 [Haliscomenobacter hydrossis DSM
1100]
gi|332331453|gb|AEE48554.1| protein of unknown function DUF218 [Haliscomenobacter hydrossis DSM
1100]
Length = 251
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 52/246 (21%), Positives = 110/246 (44%), Gaps = 18/246 (7%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+ W+ L+ + ++ R+ + +L F L + + ++ P
Sbjct: 15 PMFWVMLLAIAAFISKRAARRRRYALILVLFLIFFSNKG----LFEAVCSLWELPPNKIT 70
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D +LLG G + P S +R+ +T+ LY+ K + I+++GG
Sbjct: 71 QSYDIG--ILLG-GYSKTDGYPQDGRHHFNASVNRLTQTLELYQQGKIRN----ILLTGG 123
Query: 122 DPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIIL 178
G E+ V + + + G+ R + +E+Q+ +T++NA S+ +I+ K + +L
Sbjct: 124 SSNIITKGQLEAQVVVDFIEDMGIPRTAVIVESQARNTWENALNSTQIIQAKYPKASCVL 183
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDY----LNAYYSIIPLSANFYLTELALKEYIGIL 234
++SA H++R++ F+ G++ + C+DY L + + E KE+ G+L
Sbjct: 184 ITSATHMRRARACFRKAGLDIEYYCTDYRRTKLGGWAWLKFEPGVIGDWEGLFKEWAGML 243
Query: 235 IAYYRG 240
+ +G
Sbjct: 244 VYAMKG 249
>gi|116074507|ref|ZP_01471769.1| hypothetical protein RS9916_38692 [Synechococcus sp. RS9916]
gi|116069812|gb|EAU75564.1| hypothetical protein RS9916_38692 [Synechococcus sp. RS9916]
Length = 261
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 90/238 (37%), Gaps = 31/238 (13%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ + + ++L GI+ +L + L+ +QR L+S K + IV+L
Sbjct: 30 RRRWPVIVAVVLLWVSSLGIVSQLLWRWLESPWQRQLVSAASK--ADAIVVLSGARH--- 84
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKL 138
P + R + L+++ K ++ +GG E +Y +
Sbjct: 85 PAPGASQVSEWHDPDRFLTGVDLFRAGK----APRLLFTGGASPFLPGQPPEGSLYLKEA 140
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMI----------KNMQGKNIILVSSAYHLKRS 188
GV + ++T + A ++ ++ IILV+SA+H++R+
Sbjct: 141 AALGVPTAAMASTPPVVNTAEEAVAIRRLLMAGSGSQLSDQDASSGRIILVTSAFHMRRA 200
Query: 189 QLYFQHFGINTKASCSDY----------LNAYYSIIPLSANFYLTELALKEYIGILIA 236
Q F+ G+ + D+ +P + + A++E +G ++
Sbjct: 201 QRLFERQGLVVQPFPVDFQARGRWAGAVWTDPTQWLPTARALDDSSRAMRELLGRVVY 258
>gi|315039245|ref|YP_004032813.1| hypothetical protein LA2_10585 [Lactobacillus amylovorus GRL 1112]
gi|312277378|gb|ADQ60018.1| hypothetical protein LA2_10585 [Lactobacillus amylovorus GRL 1112]
Length = 367
Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 45/243 (18%), Positives = 92/243 (37%), Gaps = 25/243 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+++ +I LI S L+ +++S + I + +L L +
Sbjct: 116 LIVGFIALIFSILVLVGPGRYLPYWLSALLASIPAIA-LYLGLVLYNFLVNLLLYQIYPR 174
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIIS 119
+K+ + +++LG G + S +RI ++ + ++ II+S
Sbjct: 175 HYKQ--DYLIVLGAGLLNGDQV-------SKLLAARINRAIQFSNRQYQKGRKRPIIIMS 225
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NI 176
GG + E++ GV D I +E QS +T+QN FS +
Sbjct: 226 GGQGPDEKIPEALAMARFAQHRGVPTDQILIEDQSKNTYQNMLFSKRIATQDFDSDKFRA 285
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 286 TFFSNNYHIFRAALLAKEVGLKANGVGA-----------FTRLYYLPNAIIREFAGVFVM 334
Query: 237 YYR 239
+ R
Sbjct: 335 HKR 337
>gi|227533012|ref|ZP_03963061.1| integral membrane protein [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|227189413|gb|EEI69480.1| integral membrane protein [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
Length = 352
Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 86/235 (36%), Gaps = 29/235 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTI--LLKHLQFSYQRPLLSPQWKK 64
L++ + + F G+ ++ T+ L L RP
Sbjct: 113 LLLIEIAASFGRRFIPDPLYFSLAIFFGLGGFYVLLTLYNFLTVLILYNFRPQPH----- 167
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS-MHCTIIISGGDP 123
+ +++LG G + S SRI ++ Y+ + II SGG
Sbjct: 168 NRTFLIVLGAGLLHGDQV-------SPLLASRIDAAIKFYRKQIKKGRPAPRIIFSGGKG 220
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVS 180
++E++ L G+ D LE QS T +N QFS +I G+ +
Sbjct: 221 SDEAISEAMAMQRYALGKGIAEGDTLLEDQSTTTLENMQFSKRLITQEIGESPYKASFFT 280
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ YHL R+ ++ + GI ++ ++L ++EY+ +++
Sbjct: 281 NNYHLFRAGIFARMAGIAANGVGG-----------ATSFYFLPNAVIREYLALVV 324
>gi|224477345|ref|YP_002634951.1| hypothetical protein Sca_1860 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421952|emb|CAL28766.1| hypothetical protein SCA_1860 [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 329
Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 98/243 (40%), Gaps = 27/243 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFML--LFSFIGWGIIPTILLKHLQFSYQRPLL 58
M L + I + +L + ++ L LF ++ W + T+ S+
Sbjct: 81 MFLLRLLCISAAVFILAYGFYLLSWLPVLFLNGLFLWLCWIAVSTLFALIHYLSWSSTYS 140
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
++ K N+I++LG G + R+ + LY + +Q II+
Sbjct: 141 MIEFTKPTNLIIVLGAGLYREKVTQMLAW--------RLDRAVALYFAQEQPVY---IIV 189
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKN 175
SGG + ++E+ L+E + + I +E +S T++N + ++ + + +N
Sbjct: 190 SGGKGEGEHVSEAEAMKAYLIEEHIPENHILMEDESHSTYENLANTKQILHDRLAFRPEN 249
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +V+S +H+ R+ + Q I S A++ +++++ ++
Sbjct: 250 MTIVTSQFHILRALRFAQILKIKASGISSRTPYAFFD-----------TALIRDFLALMY 298
Query: 236 AYY 238
Y
Sbjct: 299 CYK 301
>gi|325578228|ref|ZP_08148363.1| hypothetical protein HMPREF9417_1104 [Haemophilus parainfluenzae
ATCC 33392]
gi|325159964|gb|EGC72093.1| hypothetical protein HMPREF9417_1104 [Haemophilus parainfluenzae
ATCC 33392]
Length = 247
Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 56/247 (22%), Positives = 96/247 (38%), Gaps = 27/247 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ W ++ + + +I F LL+ + +L L L+
Sbjct: 18 ILILWGLSLILAKFNF-KKLSRISTSLGFSLLY-LLSIPYTAQVLKDSLITE---DHLTL 72
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + IVLLG G + A Q E +R Y + Q H ++I+G
Sbjct: 73 QDYQQAQAIVLLGGGLRDSKELYAPLASTGIQ-----LERLR-YAAFLQKETHLPLLITG 126
Query: 121 GDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
P G E+ + +L V +E ++L T +NA F+ M++ IILV
Sbjct: 127 ASP--TGAIEAKIAAEELQNFFNVPTK--WIEPKALTTKENALFTKQMLEKEGIHKIILV 182
Query: 180 SSAYHLKRSQLYFQHFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++ +H++R++L FQ G + + Y IP LKE+IG
Sbjct: 183 TNEWHMQRAKLLFQQQGFDVLPASVGEGITPDSYGLNMMHFIPQGGAITKNMQLLKEWIG 242
Query: 233 ILIAYYR 239
Y++
Sbjct: 243 ----YWK 245
>gi|168209634|ref|ZP_02635259.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
gi|170712243|gb|EDT24425.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
Length = 257
Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 46/247 (18%), Positives = 100/247 (40%), Gaps = 33/247 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L + ++ + + ++ + + + + I I I+++ Y + L P
Sbjct: 38 LILGVVIILYTLFINKLLKLQWFKMVYKPIKILALICISIF--IIVEGAIIFYPKKSLKP 95
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+LG G +R R+ +T+ + + I++SG
Sbjct: 96 -----CDYIVVLGAGIRGENLTATLR--------DRLDKTIEYLEKTGFNGE---IVVSG 139
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN----- 175
G + E+ L+E+GV +D I LE ++ T++N +S +I+N+ K
Sbjct: 140 GQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKIIENLSRKPIKDLD 199
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I++V++ +H RS L + G N Y + + + + +E+
Sbjct: 200 ILIVTTDFHAMRSNLLAKRNGYN----------KAYLYTSKTQWYLVPSMYAREFFAFCK 249
Query: 236 AYYRGNR 242
+Y+ R
Sbjct: 250 SYFLDKR 256
>gi|33152333|ref|NP_873686.1| hypothetical protein HD1239 [Haemophilus ducreyi 35000HP]
gi|33148556|gb|AAP96075.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 256
Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
L+ + + IV+LG G + A + R+ L+K + ++
Sbjct: 77 LTIEEYRQAQAIVVLGGGVRNSRELFADYAI-AATPLERMRYAAYLHKQTR-----LPVL 130
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
++GG P E+ + + + + +E+ S T +NA + +++ II
Sbjct: 131 VTGGSPTG-KQPEANIMAQEF-ANFFDVQVKWIESASNITEENAHLTKAILDKEGITKII 188
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIG 232
LV++ +H+KR+++ F+ G N A+ + + IP + + +ALKE++G
Sbjct: 189 LVTNEWHMKRAKMLFEREGFNVLAASTSSYEGLNIIGVLPFIPQAIAMQNSSIALKEWLG 248
Query: 233 ILIAYYR 239
Y++
Sbjct: 249 ----YWK 251
>gi|168216315|ref|ZP_02641940.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
gi|182625617|ref|ZP_02953387.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|177909169|gb|EDT71640.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|182381802|gb|EDT79281.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
Length = 206
Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 14/144 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
KD ++LG G P ++ R+ E + + + +I+SGG
Sbjct: 42 KDVEYEIILGAGLYGDKPSPILQ--------ERLEEGL----KYLELHPNTKVIVSGGQG 89
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IILVSS 181
+ ES N L+ G+ + I E +S TFQN +FS +++ +++V+S
Sbjct: 90 SNEPIPESEAMKNFLVNKGINPNRIIEEDKSKSTFQNLEFSKKILEERHADKDEVLIVTS 149
Query: 182 AYHLKRSQLYFQHFGINTKASCSD 205
+HL R++ + I + S
Sbjct: 150 DFHLFRAKEIADYLNIKNEGLPSK 173
>gi|169342569|ref|ZP_02863622.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
gi|169299341|gb|EDS81408.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
Length = 206
Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 14/144 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
KD ++LG G P ++ R+ E + + + +I+SGG
Sbjct: 42 KDVEYEIILGAGLYGDKPSPILQ--------ERLEEGL----KYLELHPNTKVIVSGGQG 89
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IILVSS 181
+ ES N L+ G+ + I E +S TFQN +FS +++ +++V+S
Sbjct: 90 SNEPIPESEAMKNFLVNKGINPNRIIEEDKSKSTFQNLEFSKKILEERHADKDEVLIVTS 149
Query: 182 AYHLKRSQLYFQHFGINTKASCSD 205
+HL R++ + I + S
Sbjct: 150 DFHLFRAKEIADYLNIKNEGLPSK 173
>gi|332975337|gb|EGK12233.1| hypothetical protein HMPREF9373_1599 [Psychrobacter sp. 1501(2011)]
Length = 260
Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 90/248 (36%), Gaps = 36/248 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSI--RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
LL IF+ + + + + + + L++ G ++ ++ S+ R
Sbjct: 38 LLGMIFIAHGVFWPKIKKLLGKYHYLRKIWKTLWAGFGIWLVSFLVFAFTLHSHVRQPNE 97
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P K + I++LG G P+ SR+ + L + + +I S
Sbjct: 98 PFEKV--DAIIILGGGIQD--------GLPTPTLASRLDTAVPLIREQPE----AIVITS 143
Query: 120 GGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KN 175
GG +E L G+ DDI E +S T +N FS ++ +
Sbjct: 144 GGVGIGETRSEGEAMAQYLHALYGIPLDDIYQEKKSTSTEENFLFSQKILTDKNISLKDP 203
Query: 176 IILVSSAYHLKRSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
I +V+S +H+ RS+ +H G + T AS + Y +EY
Sbjct: 204 IAIVTSDFHMPRSKAIAEHQGYTNLVTVASPTPLETRY-------------NAWFREYFA 250
Query: 233 ILIAYYRG 240
+ + G
Sbjct: 251 YISGWILG 258
>gi|317056415|ref|YP_004104882.1| hypothetical protein Rumal_1750 [Ruminococcus albus 7]
gi|315448684|gb|ADU22248.1| protein of unknown function DUF218 [Ruminococcus albus 7]
Length = 252
Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 42/218 (19%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ ++LF +G+ + + K Q P K+ ++I++LG
Sbjct: 64 GIITAVILFLIVGFTYVGILSAKMYQAQENEP-------KETDLIIVLGC--------KV 108
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
PS R+ Y++ ++H +++SGG ++E+ L+E G +
Sbjct: 109 KGERPSRMLRRRLDAA---YEAMQKH-PDALVVLSGGKGSDEKISEAEGMRRYLVEKGAD 164
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ +E +S +TF+N +FS ++ + G++I +V+ +H R+ L + G +
Sbjct: 165 ESRLIMEDKSTNTFENIKFSFAITDKLGCGRDITIVTDGFHQYRASLIAKQEGAKNVTAY 224
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
S Y+ ++E++G+ + GN
Sbjct: 225 SANTQPK----------YVPTYWVREWLGLTHFFVFGN 252
>gi|197302961|ref|ZP_03168011.1| hypothetical protein RUMLAC_01688 [Ruminococcus lactaris ATCC
29176]
gi|197297956|gb|EDY32506.1| hypothetical protein RUMLAC_01688 [Ruminococcus lactaris ATCC
29176]
Length = 244
Score = 121 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 52/259 (20%)
Query: 5 WIFLIV--SYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR----- 55
WI L V + +L ++I FF+ L F+G L + + R
Sbjct: 8 WILLAVLCGGYGILIRAIGSGTGFFLVWIALAVIFVGCSAAAQAGLWGIMPQFLRRVTLV 67
Query: 56 -----------------PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
++ + K + I++LG PS R+
Sbjct: 68 LLCLILVLFTGIGGCIGSKMNTEGKPGLDYIIVLGA--------QVYERGPSAVLRFRLD 119
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
+ + + I+SGG +E+ L+ G+ + I E +S T
Sbjct: 120 KAVE----YLNENPQTKCIVSGGKGSNEPCSEAEGMEKYLIRQGIPEERILKEEKSKTTA 175
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLS 217
+N Q+S IK+ +++ +V++ +H+ R+ + G+ + ++ S
Sbjct: 176 ENIQYSKKFIKSK--ESVGIVTNNFHMFRALQIAKRQGLEDPSGIAAE-----------S 222
Query: 218 ANFYLTELALKEYIGILIA 236
YL L+E + +
Sbjct: 223 TALYLPNNVLREILAEIKY 241
>gi|315659410|ref|ZP_07912273.1| membrane protein [Staphylococcus lugdunensis M23590]
gi|315495529|gb|EFU83861.1| membrane protein [Staphylococcus lugdunensis M23590]
Length = 334
Score = 121 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 50/244 (20%), Positives = 105/244 (43%), Gaps = 34/244 (13%)
Query: 2 LLSWIFLIVSYW---HLLCQSIRKIFFMSCF--MLLFSFIGWGIIPTILLKHLQFSYQRP 56
L WI ++++ + ++ + K F++ L+F++ I+ LL +
Sbjct: 97 LAMWIVILIALFPVSFIVNNDVSKYIFVTYLFTTLIFTYFFGLILSCWLLAIFYSTLNS- 155
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
K +I ++LG+G P + SRI + +Y+ KQ++
Sbjct: 156 ------NKSIDIFLVLGSGLINNKVTPLL--------ASRIDAGLEIYQ--KQNNKQHLF 199
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--K 174
++SGG ES+ L++ G+ D+I E QS T++N FS MI+N+
Sbjct: 200 LVSGGQGDDELRPESVAMKEYLVDKGIVEDEIICEQQSKTTYENLYFSKEMIENLPLNKP 259
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
NI++ ++ +H+ R+ + +YS+ + +++ T ++E + I+
Sbjct: 260 NILICTNDFHILRAMFLAKKLHFK----------NFYSVGGKTKSYFFTNAFIREVVAII 309
Query: 235 IAYY 238
+
Sbjct: 310 KMDW 313
>gi|207742828|ref|YP_002259220.1| hypothetical protein RSIPO_01011 [Ralstonia solanacearum IPO1609]
gi|206594222|emb|CAQ61149.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 243
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 49/236 (20%), Positives = 96/236 (40%), Gaps = 13/236 (5%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ + R ++ L+ +++ LL Q L +VL
Sbjct: 9 VAWRMPRRRRPAGWVLGIALIVAWLAATPWCGRLLASWTHPAQPVRLDALQPHGEGAVVL 68
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG + A + E + S + T+ Y + H+ ++ +GG P+ G+ E+
Sbjct: 69 LGGSRKLAAREYAGQGETALSGLS-LERTV--YAARLAHAARLPVLATGGAPEGRGVPEA 125
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ + + G +D +E +S T +NA FS+ M++ + I LV+ +H+ R++ Y
Sbjct: 126 ELMGRLVADLG--QDARWIEARSATTEENAAFSAPMLRAAGIQRIYLVTHYWHMARARRY 183
Query: 192 FQHFGINTKASCSDY--------LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
F+ G+ + + S++P + LT AL+E +G L R
Sbjct: 184 FEGQGLIVTPAPCGWGGELEERPAGGILSLLPRTDGLALTRSALREALGQLWLSMR 239
>gi|78187520|ref|YP_375563.1| hypothetical protein Plut_1666 [Chlorobium luteolum DSM 273]
gi|78167422|gb|ABB24520.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
Length = 246
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 87/221 (39%), Gaps = 19/221 (8%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ + ++ L+ L+ +R + + IV+LG T +P P
Sbjct: 33 LAWAGVAMLLIASMPVVGNSLIGILEGPARR--VPAASVAHADAIVVLGGMTMQLPGAPL 90
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD--PQKHGLAESIVYNNKLLESG 142
++ R + LY+ K ++ +GG +++ + E + + L+
Sbjct: 91 GEW---GEAADRFEAGIDLYREGK----APLLVFTGGRLPWRENFVPEGELLALRALQLD 143
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ R + + + +T A ++ ++ K IILV+SA+H+ RS L F G +
Sbjct: 144 IPRASVLVTGIAGNTSDEAGAAAELLG--PSKKIILVTSAFHMPRSILLFHRAGFSVVPC 201
Query: 203 CSDYLNAY------YSIIPLSANFYLTELALKEYIGILIAY 237
DY S +P + +AL+E +GI+
Sbjct: 202 RVDYRVQPAERMTVLSFMPDPEALQQSFIALREIMGIVWYR 242
>gi|254519553|ref|ZP_05131609.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
gi|226913302|gb|EEH98503.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
Length = 257
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 60 PQWKKDG-NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P+ K+ + +++LG G PS R+ +T+ II+
Sbjct: 89 PKNNKNYSDYVIVLGAGVKGEK--------PSLTLMQRLDKTIEY---VNNQEKESKIIV 137
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-----NMQG 173
SGG + ++E+ L+ +G++ + I +E +S T +N FS ++I+ ++
Sbjct: 138 SGGQGRGEDISEAQAMKKYLVNNGIKEELIIMENKSTSTNENLIFSKAIIESYTKSDIGD 197
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
NI +++S +H RS + + G ++ + ++IP+ + +E++ +
Sbjct: 198 INIKIITSDFHAFRSNMIAKKLGYRNITFYTN--STLPALIPVMYS--------REFLAV 247
Query: 234 LIAYY 238
+ +Y
Sbjct: 248 IKSYL 252
>gi|332288218|ref|YP_004419070.1| hypothetical protein UMN179_00136 [Gallibacterium anatis UMN179]
gi|330431114|gb|AEC16173.1| hypothetical protein UMN179_00136 [Gallibacterium anatis UMN179]
Length = 251
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 24/224 (10%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
++ +L FI L+K + + +P + + + G +IV+LG G P
Sbjct: 42 LLAVSLLFAYFISTPFFSNFLIKTI--ALDKPNV--ELYRQGQVIVVLGGGLRYSD-YPE 96
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ R+ + L++ I ISGG E+ V ++L + +
Sbjct: 97 SYSTTAALPLERMRFAVYLHQM-----TDLPIAISGGVDN-----EAKVMGSEL-QRFFQ 145
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKN----MQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+ L+ +S T QNA + + Q + +ILV++ +H++R+ FQ G
Sbjct: 146 IEPTWLDNKSNTTEQNAIYLRKLFNQTEEGKQIQRVILVTNEWHMRRAVAAFQRQGFEVF 205
Query: 201 ASCSDYLNAYYS----IIPLSANFYLTELALKEYIGILIAYYRG 240
+ + A S IP +FY + L L+E++GIL G
Sbjct: 206 PAPTLSQRASGSGLLKFIPQPVSFYQSGLVLREWLGILRDKLIG 249
>gi|291246382|ref|YP_003505768.1| protein of unknown function DUF218 [Staphylococcus simulans bv.
staphylolyticus]
gi|290463913|gb|ADD24900.1| protein of unknown function DUF218 [Staphylococcus simulans bv.
staphylolyticus]
Length = 304
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 24/177 (13%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++D IV+LG+G P ++ SRI + + +Y+ K+ C +I+SGG
Sbjct: 132 RRDLKYIVVLGSGLRGDQVTPLLK--------SRIDKAINIYRGQKK----CKMIMSGGQ 179
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ + ES+ N + SGV ++DI ETQS +T +N Q S +++ + + I +V++
Sbjct: 180 GEDELIPESVAMLNYAVNSGVSKEDIITETQSKNTRENIQLSYNLMMG-KPERIAIVTNY 238
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YHL R+ L + I + + ++ ++E+IG L Y+
Sbjct: 239 YHLFRALLIAKENKIKCIGYGAP-----------TKLYFSLNAFIREFIGYLAMKYK 284
>gi|168205486|ref|ZP_02631491.1| conserved hypothetical protein [Clostridium perfringens E str.
JGS1987]
gi|170663020|gb|EDT15703.1| conserved hypothetical protein [Clostridium perfringens E str.
JGS1987]
Length = 257
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 48/250 (19%), Positives = 95/250 (38%), Gaps = 45/250 (18%)
Query: 1 MLLSWIF---LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
++L +F L+ W K + C + G I Y +
Sbjct: 44 IILYTLFINKLLKLQWFKKVYKPIKTLALICISIFIIVEGAIIF-----------YPKKS 92
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
L P + IV+LG G +R R+ +T+ + + I+
Sbjct: 93 LKP-----CDYIVVLGAGIRGENLTATLR--------DRLDKTIEYLEKTGFNGE---IV 136
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-- 175
+SGG + E+ L+E+GV +D I LE ++ T++N +S +I+++ GK
Sbjct: 137 VSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKIIESLSGKPIK 196
Query: 176 ---IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
I++V++ +H RS L + G + + + + + + +E+
Sbjct: 197 DLDILVVTTDFHAMRSNLLAKRNGYDNVDLYTS----------KTQWYLVPSMYAREFFA 246
Query: 233 ILIAYYRGNR 242
+Y+ R
Sbjct: 247 FCKSYFLDKR 256
>gi|27468856|ref|NP_765493.1| membrane protein [Staphylococcus epidermidis ATCC 12228]
gi|27316404|gb|AAO05579.1|AE016750_184 membrane protein [Staphylococcus epidermidis ATCC 12228]
Length = 318
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ ++ L + I + I + + S+ + Q+ K +I++LG G
Sbjct: 106 PLIIINSLALWAATIAFSTIYSFIGY---LSWSTAFENHQYYKHVKLIMVLGAGIFSEEV 162
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ +R+ + + +Y S + II+SGG ++E++ L+
Sbjct: 163 TTLL--------AARLDKALSVYHSQRTK---PIIIVSGGQGPDEPISEALAMKRYLIAH 211
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHFGINT 199
V + I +E QS +T N +S S+I +M +++ V+S +H+ R+ + + ++
Sbjct: 212 NVPENHIFMENQSTNTRTNFLYSKSIIHSMMPTSNHMLCVTSQFHVLRALKFAKKAHLSF 271
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S + +L + + +++G++ Y
Sbjct: 272 DGIGS-----------RTPYHFLAQSMIIDFLGLMYQYK 299
>gi|154502819|ref|ZP_02039879.1| hypothetical protein RUMGNA_00633 [Ruminococcus gnavus ATCC 29149]
gi|153796702|gb|EDN79122.1| hypothetical protein RUMGNA_00633 [Ruminococcus gnavus ATCC 29149]
Length = 264
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 44/246 (17%), Positives = 94/246 (38%), Gaps = 46/246 (18%)
Query: 5 WIFLIVSYWHLLCQSI----RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
W+ + ++ ++ + RK+ F + F+ ++ P
Sbjct: 54 WMVAGIGHFLMIPATKEEVTRKLLFFCVAGIWILFLAVEFFIVRAMR------------P 101
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
KK+ +++LG +R E S R + LY II+SG
Sbjct: 102 GRKKNCRYLIVLGA---------QVRGERITDSLKRRLDAALLYHQVC---PSVKIIVSG 149
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + ++E+ L E V+ + I LE QS T +N +FS + ++ ++ + +V+
Sbjct: 150 GQGKGEDVSEAYAMAQYLREHEVKDEQIMLEDQSRTTRENLRFSKAYLEELK-TPVGIVT 208
Query: 181 SAYHLKRSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ +HL R+ L + G + A+ + + ++E+ ++ +
Sbjct: 209 NNFHLFRALLIGRSEGYENLTGIAAGCNRI-------------LFLNYMVREFFAVVWLW 255
Query: 238 Y-RGNR 242
RG +
Sbjct: 256 IQRGKK 261
>gi|251779259|ref|ZP_04822179.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
E Beluga']
gi|243083574|gb|EES49464.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
E Beluga']
Length = 253
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIR-KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ + + + + +H + + +F+ L+ FI G++ + ++ + S +
Sbjct: 32 LPIFILGITLVLYHFIKSRLAFNRYFIKFNKLMRFFICIGLVLFLSIEVVIISCPK---- 87
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K++ + IV+LG G + S+ SR+ ++ +S II+S
Sbjct: 88 -SNKENTDYIVVLGAGLNNGD-------QLSYILKSRLDSVLQCINEFNNNSY---IIVS 136
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---- 175
GG ++E++ LLE G+ D I +E QS +TF+N ++S +I+ KN
Sbjct: 137 GGKGNDERISEAMAMKKYLLEQGISEDKILMEDQSKNTFENFKYSKKLIEEHSNKNIDDL 196
Query: 176 -IILVSSAYHLKRSQLYFQHFGIN 198
+ +V++ +H RS++ + G N
Sbjct: 197 SVKIVTTDFHGFRSKMLAKRNGYN 220
>gi|169343962|ref|ZP_02864953.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
gi|169297870|gb|EDS79965.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
Length = 262
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 100/243 (41%), Gaps = 33/243 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L + ++ + + ++ + + + + I I I+++ Y + L P
Sbjct: 38 LILGVVIILYTLFINKLLKLQWFKKVYKPIKILALICISIF--IIVEGAIIFYPKKSLKP 95
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+LG G +R R+ +T+ ++ I++SG
Sbjct: 96 -----CDYIVVLGAGIRGENLTATLR--------DRLDKTIEY---LEKTGYDGEIVVSG 139
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN----- 175
G + E+ L+E+GV +D I LE ++ T++N +S +I+N+ GK
Sbjct: 140 GQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKIIENLSGKPIKDLD 199
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I++V++ +H RS L + G N Y + + + + +E+
Sbjct: 200 ILVVTTDFHAMRSNLLAKRNGYN----------KAYLYTSKTQWYLVPSMYAREFFAFCK 249
Query: 236 AYY 238
+Y+
Sbjct: 250 SYF 252
>gi|329726589|gb|EGG63052.1| hypothetical protein SEVCU144_2221 [Staphylococcus epidermidis
VCU144]
Length = 318
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ ++ L + I + I + + S+ + Q+ K +I++LG G
Sbjct: 106 PLIIINSLALWAATIAFSTIYSFIGY---LSWSTAFENHQYYKHVKLIMVLGAGIFSEEV 162
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ +R+ + + +Y S + II+SGG ++E++ L+
Sbjct: 163 TTLL--------AARLDKALSVYHSQRTK---PIIIVSGGQGPDEPISEALAMKRYLIAH 211
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHFGINT 199
V + I +E QS +T N +S S+I +M +++ V+S +H+ R+ + + ++
Sbjct: 212 NVPENHIFMENQSTNTRTNFLYSKSIIHSMMPTSSHMLCVTSQFHVLRALKFAKKAHLSF 271
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S + +L + + +++G++ Y
Sbjct: 272 DGIGS-----------RTPYHFLAQSMIIDFLGLMYQYK 299
>gi|295106342|emb|CBL03885.1| Uncharacterized conserved protein [Gordonibacter pamelaeae
7-10-1-b]
Length = 333
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 33/204 (16%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
S++ + +L L + ++D + IV+ G G + P +
Sbjct: 133 SYVAFTFAALLLYSWLYRRLPK-------RRDYDYIVVHGAGLSGTKPTPLL-------- 177
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLET 152
+R+ + + L+++ + II SGG + E+ L+E GV D I E
Sbjct: 178 AARLDKGVELWEAGARR---AIIIASGGQGADEEVPEAQAMRAYLMEERGVPVDAIIEED 234
Query: 153 QSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
+S T +N + S +++ G +V+S YH+ R+ Y G+ S
Sbjct: 235 RSTTTMENLRNSKAIMDARSGAGQYRAAVVTSDYHVFRTAEYAHKIGLAADGVGS----- 289
Query: 210 YYSIIPLSANFYLTELALKEYIGI 233
+A ++ ++E++ +
Sbjct: 290 ------KTARYFWPTAFIREFVAV 307
>gi|293367067|ref|ZP_06613739.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291318797|gb|EFE59171.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329733884|gb|EGG70208.1| putative membrane protein [Staphylococcus epidermidis VCU028]
gi|329735064|gb|EGG71360.1| putative membrane protein [Staphylococcus epidermidis VCU045]
Length = 318
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 46/264 (17%), Positives = 105/264 (39%), Gaps = 48/264 (18%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF-------FMSCFMLLFSFIGWGIIPTILLKHLQF-- 51
++++ I L++ Y ++ + F F + + S++ IP I++ L
Sbjct: 58 IIVAMILLLIKYRYIFKLQTGRFFILQLSHHFYTVGLFAVSYLYISTIPLIIINSLALWA 117
Query: 52 ---------------SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
S+ + Q+ K +I++LG G + +R
Sbjct: 118 AIIAFSTIYSFIGYLSWSTAFENHQYYKHVKLIMVLGAGIFSEEVTTLL--------AAR 169
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ + + +Y S + II+SGG ++E++ L+ V + I +E QS +
Sbjct: 170 LDKALSVYHSQRTK---PIIIVSGGQGPDEPISEALAMKRYLIAHNVPENHIFMENQSTN 226
Query: 157 TFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
T N +S S+I +M ++ V+S +H+ R+ + + ++ S
Sbjct: 227 TRTNFLYSKSIIHSMMPTSSQMLCVTSQFHVLRALKFAKKAHLSFDGIGS---------- 276
Query: 215 PLSANFYLTELALKEYIGILIAYY 238
+ +L + + +++G++ Y
Sbjct: 277 -RTPYHFLAQSMIIDFLGLMYQYK 299
>gi|18310223|ref|NP_562157.1| hypothetical protein CPE1241 [Clostridium perfringens str. 13]
gi|18144902|dbj|BAB80947.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 257
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 45/247 (18%), Positives = 101/247 (40%), Gaps = 33/247 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L + ++ + + ++ + + + + I I I+++ Y + L P
Sbjct: 38 LILGVVIILYTLFINKLLKLQWFKTVYKPIKILALICISIF--IIVEGAIIFYPKKSLKP 95
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+LG G +R R+ +T+ + + I++SG
Sbjct: 96 -----CDYIVVLGAGIRGENLTATLR--------DRLDKTIEYLEKTGFNGE---IVVSG 139
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN----- 175
G + E+ L+E+GV +D I LE ++ T++N +S +I+N+ GK
Sbjct: 140 GQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKIIENLSGKPIKDLD 199
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I+++++ +H RS L + G N + + + + + +E+
Sbjct: 200 ILVITTDFHAMRSNLLAKRNGYNNVDLYTS----------KTQWYLVPSMYAREFFAFCK 249
Query: 236 AYYRGNR 242
+Y+ R
Sbjct: 250 SYFLDKR 256
>gi|212694703|ref|ZP_03302831.1| hypothetical protein BACDOR_04235 [Bacteroides dorei DSM 17855]
gi|212662682|gb|EEB23256.1| hypothetical protein BACDOR_04235 [Bacteroides dorei DSM 17855]
Length = 252
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 57/244 (23%), Positives = 98/244 (40%), Gaps = 21/244 (8%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
IFL++ +L K ++ LLF G + + + Y RPL +K
Sbjct: 15 IFLLLGV--VLKSKRWKRLCLTLSALLFLLFSNGALYQWIAEQWYKEYDRPL---PERKQ 69
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQS-YSRIFETMRLYKSCKQHSMHC----TIIISG 120
++LG R P F R+ E +RLYK + +II S
Sbjct: 70 YTYGIVLGG----YSYWDWKRSRPEFSEIADRLLEGIRLYKHGCIRKLVLASDGSIIESK 125
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILV 179
G + L + G+ +D+ LET++ +T++NA F+ +I N M+ ++ +L+
Sbjct: 126 DGKGLQGN--AADMKQYLADLGMPLEDVILETRANNTWENATFTLELIGNSMKTESTLLI 183
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL----NAYYSIIPLSANFYLTELALKEYIGILI 235
+SA H++RS F G+N +D + +P E++G L
Sbjct: 184 TSATHMRRSLWTFHAAGLNPDTYITDTFPEIKGEKTNFLPSWHVLASWPELTHEWVGYLY 243
Query: 236 AYYR 239
R
Sbjct: 244 YRLR 247
>gi|315283550|ref|ZP_07871714.1| putative cytoplasmic protein [Listeria marthii FSL S4-120]
gi|313612811|gb|EFR86789.1| putative cytoplasmic protein [Listeria marthii FSL S4-120]
Length = 183
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 80/207 (38%), Gaps = 28/207 (13%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+ I G I +++ FS R + + + +++LG P EPS
Sbjct: 1 IFLILIVIGFIYLLIVAAFMFSGAR----AKPNGNADTVLVLGARVNGDPA------EPS 50
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R+ + + + +I+SGG + +E+ V L+ G+ R+ I +
Sbjct: 51 SVLKERLDTAV----AYLNENPTLKVIVSGGQGEDESASEASVMEEYLVNQGIARNRINV 106
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E +S T +N ++S ++V+S YH+ R+ + + G++ +
Sbjct: 107 EDKSTRTEENLKYSK---GKFNLGKTVIVTSDYHMYRALMLAKRQGVDASGLPAKSQ--- 160
Query: 211 YSIIPLSANFYLTELALKEYIGILIAY 237
+ + ++E + I A+
Sbjct: 161 -----SAGKYKK---MMRETLSITYAW 179
>gi|168213058|ref|ZP_02638683.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
gi|170715436|gb|EDT27618.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
Length = 257
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 101/247 (40%), Gaps = 33/247 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++L + ++ + + ++ + M + + I I I+++ Y +
Sbjct: 38 LILGVVIILYTLFINKLLKLQWFKTVYKPMKILALICISIF--IIVEGAIIFYPK----- 90
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K + IV+LG G +R R+ +T+ + + I++SG
Sbjct: 91 KSLKSCDYIVVLGAGIRGENLTATLR--------DRLDKTIEYLEKTGFNGE---IVVSG 139
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN----- 175
G + E+ L+E+GV +D I LE ++ T++N +S +I+N+ GK
Sbjct: 140 GQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKIIENLSGKPIKDLD 199
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I++V++ +H RS L + G N Y + + + + +E+
Sbjct: 200 ILIVTTDFHAMRSNLLAKRNGYN----------KAYLYTSKTQWYLVPSMYAREFFAFCK 249
Query: 236 AYYRGNR 242
+Y+ R
Sbjct: 250 SYFLDKR 256
>gi|163816062|ref|ZP_02207432.1| hypothetical protein COPEUT_02242 [Coprococcus eutactus ATCC 27759]
gi|158448872|gb|EDP25867.1| hypothetical protein COPEUT_02242 [Coprococcus eutactus ATCC 27759]
Length = 282
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 43/249 (17%), Positives = 96/249 (38%), Gaps = 37/249 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK--------IFFMSCFMLLFSFIGWGIIPTILLKHLQFS 52
+L + +F +++ + + I K C ++ + + + +++ +
Sbjct: 62 LLGTGVFALLTLYGVFRAKINKSVRKLWDKKAGKICLSIVLALVTIALALVVVITY---- 117
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ + K+D +V+LG PS R+ + +
Sbjct: 118 HMVYAAHVKPKQDAT-VVVLGCAVR--------GGGPSLMLRERLIAA----QDYLDENP 164
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++SGG ++E+ L E G+ + I +E +S T +N +FS+ +I+
Sbjct: 165 EAVCVVSGGQGADESMSEAQCMYEYLTEHGISPERIYMEDKSTSTRENIKFSAQIIEQND 224
Query: 173 -GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
+ +V++ +H R++ + GI+T SI +A + L ++E
Sbjct: 225 LPDGMNIVTNEFHEYRAKRIAEKQGIDT-----------GSIAGSTAWWLLPTYYVREMA 273
Query: 232 GILIAYYRG 240
GIL + G
Sbjct: 274 GILYEWISG 282
>gi|281490953|ref|YP_003352933.1| hypothetical protein LLKF_0463 [Lactococcus lactis subsp. lactis
KF147]
gi|281374711|gb|ADA64231.1| Hypothetical protein LLKF_0463 [Lactococcus lactis subsp. lactis
KF147]
Length = 194
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 78/217 (35%), Gaps = 30/217 (13%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ F+ L I + IL K + + D I++LG+
Sbjct: 7 IIGAFVGLILLISVICLALILSKSTDR-------TAENSTDIKTILVLGSRINQNK---- 55
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+P+ + R+ + L K ++ II+SG ++E+ N L+ +
Sbjct: 56 ---KPAKITQERLDAALLLAK----NNPQAKIIVSGAKGADEPVSEAFSMKNYLISHHIR 108
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
D I E ++ DT +N +S ++V+S +HL R+ +H G+ + +
Sbjct: 109 ADRIISEDKAGDTAENIAYSKKYFDG----KTVIVTSDFHLYRALYLAKHEGVKVEGFAA 164
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
Y E +G++ A+ G
Sbjct: 165 KTKVNNL--------LYYPNYYGHEILGLIYAFVFGK 193
>gi|57865386|ref|YP_189508.1| hypothetical protein SERP1950 [Staphylococcus epidermidis RP62A]
gi|251811935|ref|ZP_04826408.1| membrane protein [Staphylococcus epidermidis BCM-HMP0060]
gi|282875226|ref|ZP_06284099.1| putative membrane protein [Staphylococcus epidermidis SK135]
gi|57636044|gb|AAW52832.1| membrane protein, putative [Staphylococcus epidermidis RP62A]
gi|251804534|gb|EES57191.1| membrane protein [Staphylococcus epidermidis BCM-HMP0060]
gi|281295991|gb|EFA88512.1| putative membrane protein [Staphylococcus epidermidis SK135]
Length = 318
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ ++ L + I + I + + S+ + Q+ K +I++LG G
Sbjct: 106 PLIIINSLALWAAIIAFSTIYSFIGY---LSWSTAFENHQYYKHVKLIMVLGAGIFSEEV 162
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ +R+ + + +Y S + II+SGG ++E++ L+
Sbjct: 163 TTLL--------AARLDKALSVYHSQRTK---PIIIVSGGQGPDEPISEALAMKRYLIAH 211
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHFGINT 199
V + I +E QS +T N +S S+I +M ++ V+S +H+ R+ + + ++
Sbjct: 212 NVPENHIFMENQSTNTRTNFLYSKSIIHSMMPTSSQMLCVTSQFHVLRALKFAKKAHLSF 271
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S + +L + + +++G++ Y
Sbjct: 272 DGIGS-----------RTPYHFLAQSMIIDFLGLMYQYK 299
>gi|110834807|ref|YP_693666.1| hypothetical protein ABO_1946 [Alcanivorax borkumensis SK2]
gi|110647918|emb|CAL17394.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 203
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 88/212 (41%), Gaps = 14/212 (6%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
++ +++ ++ L + S+ PL +V+LG G R +
Sbjct: 1 MMLTYLALLVLVGASLPAVVRSFLPPLPRRITGITPQAVVVLGAGRRQRKG----RSSLN 56
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGG-DPQKHG--LAESIVYNNKLLESGVERDD 147
+ R+ L H +++SGG P KH E+ + + L R D
Sbjct: 57 TRGLRRLKLAAELA-----HEHGLPLLVSGGGQPPKHDDEPTEADLMAEQALRRW-PRLD 110
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
+ E +S +T++NA +SS ++ + ++LVS HL R+ L FQ G+ +A+ S L
Sbjct: 111 VIKEFRSRNTWENACYSSELLADRGIDEVLLVSDRAHLPRALLCFQSQGVLAQAAWSKRL 170
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+P + + E++ ++ + R
Sbjct: 171 -PKQEWLPSAGAISMVPEIWYEWLALVWYHAR 201
>gi|227902634|ref|ZP_04020439.1| integral membrane protein [Lactobacillus acidophilus ATCC 4796]
gi|227869540|gb|EEJ76961.1| integral membrane protein [Lactobacillus acidophilus ATCC 4796]
Length = 343
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/244 (18%), Positives = 92/244 (37%), Gaps = 34/244 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS-YQRPLLS 59
++ S IF I+ L + + + ++ + ++ L+ L + Y R
Sbjct: 99 LIFSVIF-ILGPGRYLPHWLSALLASIPAIAIYLGL---VLYNFLVNLLLYQIYPR---- 150
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIII 118
+ +++LG G + S +RI ++ + ++ II+
Sbjct: 151 ---HYKQDYLIVLGAGLINGDQV-------SKLLAARINRAIQFSNRQYQKGRKRPIIIM 200
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---N 175
SGG + E++ GV D I +E QS +T+QN FS + N G
Sbjct: 201 SGGQGPDEKVPEALAMAKFAQHRGVSPDHILIEDQSKNTYQNMLFSKQLATNDFGGPNFK 260
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 261 ATFFSNNYHIFRAALLAKEVGLKANGVGA-----------FTRLYYLPNAIIREFAGVFV 309
Query: 236 AYYR 239
+ R
Sbjct: 310 MHKR 313
>gi|319401654|gb|EFV89863.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
Length = 318
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ ++ L + I + I + + S+ + Q+ K +I++LG G
Sbjct: 106 PLIIINSLALWVATIAFSTIYSFIGY---LSWSTAFENHQYHKHVKLIMVLGAGIFSEEV 162
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ +R+ + + +Y S + II+SGG ++E++ L+
Sbjct: 163 TTLL--------AARLDKALSVYHSQRTK---PIIIVSGGQGPDEPISEALAMKRYLIAH 211
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHFGINT 199
V + I +E QS +T N +S S+I +M ++ V+S +H+ R+ + + ++
Sbjct: 212 NVPENHIFMENQSTNTRTNFLYSKSIIHSMMPASSQMLCVTSQFHVLRALKFAKKAHLSF 271
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S + +L + + +++G++ Y
Sbjct: 272 DGIGS-----------RTPYHFLAQSMIIDFLGLMYQYK 299
>gi|291545077|emb|CBL18186.1| Uncharacterized conserved protein [Ruminococcus sp. 18P13]
Length = 259
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 68/176 (38%), Gaps = 25/176 (14%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ ++ ++LG PS R+ + C +++SG
Sbjct: 99 KRTQNADVAIVLGC--------KVNGTRPSIMLQQRLDAAY----AYWTEHPDCLLVVSG 146
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIIL 178
G ++E+ L E GV D I E +S T +N +FS ++ K I L
Sbjct: 147 GKGSNEDISEAACMYQYLTEKGVPADRILQEDRSTSTRENLRFSKELLAERGCMPKEIAL 206
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
V++ +H R+ + + G + + + + + ++E++GIL
Sbjct: 207 VTNEFHQLRASMIAKDCGWTVSSIPA-HTQPWL----------IPTYWVREWLGIL 251
>gi|270293195|ref|ZP_06199406.1| integral membrane protein [Streptococcus sp. M143]
gi|270279174|gb|EFA25020.1| integral membrane protein [Streptococcus sp. M143]
Length = 340
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/236 (19%), Positives = 91/236 (38%), Gaps = 24/236 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ + F+I++ + + F + I L Y L
Sbjct: 101 VILFFFVIMAIRMSDTNGLFYTNHLVNIFFFFLIYSYLIFGFAFAGFL--LYSILYLFIP 158
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
KK + I++ G G + ++ P + +RI + + Y+ + + +I SGG
Sbjct: 159 KKKHYDFIIIHGAGL-----LNGEKVTPLLK--NRIDKAVEAYRQ--SSNPNVKLIASGG 209
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILV 179
++E+ N LLE V R+ I LE S T++N FS M + + + V
Sbjct: 210 RGGDEKISEAQAICNYLLEETDVPREAILLEESSTTTYENLLFSKEMGEKLVASPRFLFV 269
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YH+ R+ Y + + +A +Y+ ++EY+ + +
Sbjct: 270 TNDYHVFRTSTYARQLRMKGDGLGC-----------RTAGYYIPSAFIREYVALCV 314
>gi|237711018|ref|ZP_04541499.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265750614|ref|ZP_06086677.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|229454862|gb|EEO60583.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263237510|gb|EEZ22960.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 252
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 21/244 (8%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
IFL++ +L K ++ LLF G + + + Y RPL +K
Sbjct: 15 IFLLLGV--VLKSKRWKRLCLTLSALLFLLFSNGALYQWIAEQWYKEYDRPL---PERKQ 69
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQS-YSRIFETMRLYKSCKQHSMHC----TIIISG 120
++LG R P F R+ E +RLYK + + +II S
Sbjct: 70 YTYGIVLGG----YSYWDWKRSRPEFSEIADRLLEGIRLYKHGRIRKLVLASDGSIIESK 125
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILV 179
G + L + G+ +D+ LET++ +T++NA F+ +I N M+ ++ +L+
Sbjct: 126 DGKGLQGN--AADMKQYLADLGMPLEDVILETRANNTWENATFTLELIGNSMKTESTLLI 183
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL----NAYYSIIPLSANFYLTELALKEYIGILI 235
+SA H++RS F G+N +D + +P E++G L
Sbjct: 184 TSATHMRRSLWTFHAAGLNPDTYITDTFPEIKGEKTNFLPSWHVLASWPELTHEWVGYLY 243
Query: 236 AYYR 239
R
Sbjct: 244 YRLR 247
>gi|118443232|ref|YP_877657.1| hypothetical protein NT01CX_1576 [Clostridium novyi NT]
gi|118133688|gb|ABK60732.1| conserved protein [Clostridium novyi NT]
Length = 253
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 39/229 (17%), Positives = 96/229 (41%), Gaps = 38/229 (16%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
I++ + LL ++ F+ +++ F+ + I+ + ++ + +
Sbjct: 51 IINIYRLLNSRLK---FLVKLVIIAGFVSFIILESCIIYF---------GISKKYVKSDY 98
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
I++LG S R+ +T+ + + II+SGG +
Sbjct: 99 IIVLGAAVHGD--------YMSLILKERVDKTLDYLREY----PNTKIIVSGGKGPGESI 146
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---IILVSSAYHL 185
E+ L+ +G+ + I E +S T +N ++SS +I++M+ + +V++ +H+
Sbjct: 147 TEAEAMRRYLVSNGICDNQIIKEEKSRTTAENFKYSSKIIRSMENGRTPTVSVVTTNFHM 206
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
R+++ + G+ + S I + N+Y ++EY ++
Sbjct: 207 LRAKMLAKRSGLVVQEVVSK------GHISSAPNYY-----VREYFALV 244
>gi|258511943|ref|YP_003185377.1| hypothetical protein Aaci_1976 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478669|gb|ACV58988.1| protein of unknown function DUF218 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 199
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 81/215 (37%), Gaps = 26/215 (12%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG--NIIVLLGNGTTIIPTIPAIR 86
L + G+ L L R + + ++ V+LG
Sbjct: 2 AWLWMCLLACGVAALGSLAFLLRFAVRLKHEGRSHRPQKSDVGVVLGA--------YTDG 53
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
EPS +R+ + LY+ + II+SGG + ++E+ L+ +G+ D
Sbjct: 54 YEPSHPLVARLRAAIALYRQGYIRA----IIVSGGQGENETVSEARSMKRFLVMNGIPSD 109
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+ E S +T++N SS+++++ + ++++S YHL R+ + G+ +
Sbjct: 110 AVHEERMSTNTWENLYHSSAIMRDRGYRTAVIITSDYHLPRALAVARMMGMEATGCGAAS 169
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ A++E + RG
Sbjct: 170 TKGEFR------------AAVREVFAHIEYMLRGR 192
>gi|160894200|ref|ZP_02074978.1| hypothetical protein CLOL250_01754 [Clostridium sp. L2-50]
gi|156864233|gb|EDO57664.1| hypothetical protein CLOL250_01754 [Clostridium sp. L2-50]
Length = 255
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/247 (18%), Positives = 90/247 (36%), Gaps = 43/247 (17%)
Query: 2 LLSWIFLIVSYWHL----------LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQF 51
++ I LI+ L ++ K+ +++ +G+ TI +
Sbjct: 39 VVLGICLILYAAWFHRVNCRVKKWLTRTTGKVICGIVLLIVLVAVGFAAAGTICM----- 93
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
S KD ++++LG G PS R+
Sbjct: 94 ----VRASKTAPKDETVMIVLGCGVNGD--------RPSLMLTERLDAAY----DYLNTH 137
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
I+SGG + ++E+ L E G+ ++ + E +S T +N +S +++
Sbjct: 138 EEVVGILSGGQGKGENISEAECMYRYLTEKGIAKERLYKEERSTSTRENLLYSKKIMEEE 197
Query: 172 QGK-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+I+V++ +H R+ + +H GI A C +A + L L+E
Sbjct: 198 HLDFRVIIVTNEFHEYRASVIAEHTGITPSAVCG-----------KTAWWLLPTYYLREL 246
Query: 231 IGILIAY 237
GI+ +
Sbjct: 247 YGIVFEW 253
>gi|319893318|ref|YP_004150193.1| Integral membrane protein [Staphylococcus pseudintermedius
HKU10-03]
gi|317163014|gb|ADV06557.1| Integral membrane protein [Staphylococcus pseudintermedius
HKU10-03]
Length = 260
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/246 (18%), Positives = 96/246 (39%), Gaps = 38/246 (15%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFI-----GWGIIPTILLKHLQFSYQRP------- 56
I +YWH++ + I + ++ + IP LL L +
Sbjct: 19 IQTYWHIIGRVITYHLAIVALIIGSLLVIPLIPAVLTIPFQLLVQLAIVFLTAWQTYLFM 78
Query: 57 ---LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
L I++LG G P ++ +R+ + L + ++
Sbjct: 79 TFTFLHHLPPVTRANIIVLGAGIYTEAVTPMLK--------ARLDRAIALSRQLEK---- 126
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
II+SGG ++E++ L++ G+ I +E QS +T QN +S + Q
Sbjct: 127 FHIIVSGGQGPDEPISEALAMQRYLIQQGIAPKQITMEDQSTNTRQNIYYSKHYLALHQQ 186
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ I+V+S++H+ R+ + ++ + + + +++ +++Y G+
Sbjct: 187 PHTIIVTSSFHILRALRLAERQQLHAFGYGAP-----------TPHHWVSRELIRDYSGL 235
Query: 234 LIAYYR 239
L Y R
Sbjct: 236 LFQYPR 241
>gi|261868380|ref|YP_003256302.1| molybdate ABC transporter permease [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413712|gb|ACX83083.1| molybdate ABC transporter permease protein [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 247
Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 22/228 (9%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ C+++ ++ + ++L+ + IL L L+ + K IVLLG
Sbjct: 31 IRCKAVGRLCALLGILILYV-VSIPYTAQILKDSL---VTEDHLTLEDYKQAQAIVLLGG 86
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + A S + E +R Y + Q ++ISG G +E+ V
Sbjct: 87 GVRDSKELYAP-----LASSATQLERLR-YAAYLQKETQLPLLISG--VSPTGASEAKVS 138
Query: 135 NNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+LL+ V LE +SL T +NA ++ +++ IILV++ +H++R++L F+
Sbjct: 139 AQELLDFFHVPTK--WLEEKSLTTKENALYTRQLLEKEGINKIILVTNEWHMQRAKLLFE 196
Query: 194 HFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
G + Y IP + LKE++G L
Sbjct: 197 GQGFQVLPASVGEGITPEAYSLNMMHFIPQAGAIAKNMQLLKEWMGYL 244
>gi|119896762|ref|YP_931975.1| hypothetical protein azo0471 [Azoarcus sp. BH72]
gi|119669175|emb|CAL93088.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
Length = 283
Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 81/216 (37%), Gaps = 23/216 (10%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+ + +L L+ ++ + + IV+LG G +
Sbjct: 78 LLLSTPASVSRMLVPLE---PTAVVDMEAARGAQAIVILGGGRRSHAAEYGGDTVNRL-T 133
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG-VERDDIKLET 152
R+ RL ++ +++SGG P + E+ + L E + E
Sbjct: 134 LERLRYGARLARA-----TGLPLLVSGGAPSG-DVPEATLMAAALREDFGIAPR--WEEG 185
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA--- 209
S DT NA+ S++M++ ++LV+ A H++R++ F G+ + + +L
Sbjct: 186 GSFDTRDNARLSAAMLRADGVTRVVLVTHAAHMRRAEAEFALHGLAVVPAPTAWLGPGPE 245
Query: 210 -------YYSIIPLSANFYLTELALKEYIGILIAYY 238
+ +P Y AL E++G+L
Sbjct: 246 RADDDDEVWPSLPSQGTAYAGWYALHEWMGLLAYRL 281
>gi|304316432|ref|YP_003851577.1| hypothetical protein Tthe_0963 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777934|gb|ADL68493.1| protein of unknown function DUF218 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 191
Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + I++LG PS R+ E ++LYK + II+SGG
Sbjct: 31 PVNSDAIIVLGCAVY--------GKNPSPFFKERLSEAIKLYKE----GLGKYIIVSGGK 78
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ LL++G+ + + ++ S T QN + S ++ K I+VS+
Sbjct: 79 GPGEDISEAEAGKEYLLKNGITDNVVLMDDGSYSTLQNLENSKKIMDEKSLKTAIIVSNK 138
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+HLKR+ + + GIN +Y + + L+E +L Y R
Sbjct: 139 FHLKRASIIAKEAGINA---------SYSGVFVKRYFYEEVYGFLREAPALLYMYLR 186
>gi|300362750|ref|ZP_07058925.1| integral membrane protein [Lactobacillus gasseri JV-V03]
gi|300353178|gb|EFJ69051.1| integral membrane protein [Lactobacillus gasseri JV-V03]
Length = 373
Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 97/243 (39%), Gaps = 31/243 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ W + +H L + + + + + ++ L ++
Sbjct: 128 LVALWTLYRLGVFHKLPGWLHSLVAGAALIAFYLLF-------VMYNFLLNLVLYQIVPR 180
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIIS 119
++K+ + +++LG G + S SRI + K + +I+S
Sbjct: 181 RYKQ--DYLIVLGAGLIDGKKV-------SRLLGSRIDRAIAFSNKQYDKGHKRPKLIMS 231
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGK--NI 176
GG + L+E+ + ++ G + D I LE +S +T+QN +S ++ IK+ + +
Sbjct: 232 GGQGKDEDLSEAEAMKDYAVKRGYDPDLILLEDKSTNTYQNMVYSKAVAIKDYGNEKFKV 291
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++ YHL R+ LY + + + + ++L ++E+ G+ I
Sbjct: 292 KFFTNNYHLFRAGLYAKMAHLKANGIGA-----------TTRFYFLPNATIREFAGVFIM 340
Query: 237 YYR 239
+ +
Sbjct: 341 HKK 343
>gi|58338180|ref|YP_194765.1| hypothetical protein LBA1938 [Lactobacillus acidophilus NCFM]
gi|58255497|gb|AAV43734.1| hypothetical protein LBA1938 [Lactobacillus acidophilus NCFM]
Length = 367
Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 46/244 (18%), Positives = 92/244 (37%), Gaps = 34/244 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS-YQRPLLS 59
++ S IF I+ L + + + ++ + ++ L+ L + Y R
Sbjct: 123 LIFSVIF-ILGPGRYLPHWLSALLASIPAIAIYLGL---VLYNFLVNLLLYQIYPR---- 174
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIII 118
+ +++LG G + S +RI ++ + ++ II+
Sbjct: 175 ---HYKQDYLIVLGAGLINGDQV-------SKLLAARINRAIQFSNRQYQKGRKRPIIIM 224
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---N 175
SGG + E++ GV D I +E QS +T+QN FS + N G
Sbjct: 225 SGGQGPDEKVPEALAMAKFAQHRGVSPDHILIEDQSKNTYQNMLFSKQLATNDFGGPNFK 284
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 285 ATFFSNNYHIFRAALLAKEVGLKANGVGA-----------FTRLYYLPNAIIREFAGVFV 333
Query: 236 AYYR 239
+ R
Sbjct: 334 MHKR 337
>gi|152975134|ref|YP_001374651.1| hypothetical protein Bcer98_1335 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152023886|gb|ABS21656.1| protein of unknown function DUF218 [Bacillus cytotoxicus NVH
391-98]
Length = 193
Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 88/211 (41%), Gaps = 32/211 (15%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
+ +F IG+ + LQ+ R + K D + +++LG
Sbjct: 11 SLITMFIIIGY-------ISFLQYEIYR-HGHMEVKNDADYMIVLG--------TSVKGS 54
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS+ RI K ++ I+SGG +K ++E++ L++ G+ +
Sbjct: 55 KPSYALQYRIDAAANYLKQNERTIA----ILSGGQGKKEHISEALAMKRGLMKQGISEER 110
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
+ LE +S +T +N FS +I + K +LV++ +H+ R++ + G++ + +
Sbjct: 111 MILEDRSTNTDENITFSKELIPPDRKKG-LLVTNDFHMFRAKKIAEKQGLHLEGLSA--R 167
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+I + ++EY I +
Sbjct: 168 TPKPIVIKSN---------IREYFAITKYWM 189
>gi|153955310|ref|YP_001396075.1| hypothetical protein CKL_2692 [Clostridium kluyveri DSM 555]
gi|146348168|gb|EDK34704.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
Length = 196
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 82/210 (39%), Gaps = 27/210 (12%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
F+L F + + + L+ +Q Y P K + I++LG
Sbjct: 7 FVLYFIIVIFLLA---LITEIQIIYFGENAKP---KKSDCIIVLGC--------RVYGST 52
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS R+ + + LY II+SGG ++E+ N L+ G++ +
Sbjct: 53 PSPFLIWRLNKGLELY----DKGYGDYIIVSGGKGPGENISEAKAMKNYLVYKGIDSSRV 108
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
+E +S+ T +N S +++ K ++VS+ YHLKR+ L + GI
Sbjct: 109 IMEDKSMSTMENLSNSKRVMEEKGLKTAVIVSNKYHLKRASLMAESHGIE---------G 159
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIAYY 238
+Y + + ++E + Y
Sbjct: 160 SYSGVFVYTYKNREITGYIREIPALWKYYL 189
>gi|152989850|ref|YP_001355572.1| hypothetical protein NIS_0098 [Nitratiruptor sp. SB155-2]
gi|151421711|dbj|BAF69215.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 233
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 55/246 (22%), Positives = 98/246 (39%), Gaps = 36/246 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L +F + ++ L + +K+ FM +L + I LL L+ P
Sbjct: 13 LLPPALF-VWGFFLLGFKHYKKVAFMLALLL--YLLSTDIAGRWLLAPLENWKFAP---- 65
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ +V+LG G P S S RI + + ++ +G
Sbjct: 66 -SNVEPKYVVVLGGGYDRGKFFPT-----SASSTERILTGLLTAQQK-----GLPLLFTG 114
Query: 121 GDPQKHGLAESIVYNNKL--LESGVERD-DIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
E+ + L+ I+ E +SL+T+QNA F++ + + K+I
Sbjct: 115 --------LEAEYAKRTIHTLQKTFSLKLSIRYEVKSLNTYQNAAFTA---QKLPQKSIC 163
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGI 233
LV+SAYH+ R+ F+HFG + DY + + P + +A+ EY+G+
Sbjct: 164 LVTSAYHMPRAYKLFRHFGFSITPVSCDYQTKDDIKVWDLFPSMEGLKKSYIAIHEYVGL 223
Query: 234 LIAYYR 239
L R
Sbjct: 224 LSLILR 229
>gi|160914657|ref|ZP_02076871.1| hypothetical protein EUBDOL_00664 [Eubacterium dolichum DSM 3991]
gi|158433197|gb|EDP11486.1| hypothetical protein EUBDOL_00664 [Eubacterium dolichum DSM 3991]
Length = 255
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 80/218 (36%), Gaps = 38/218 (17%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
I I ++ F+ F + I+ L + +++LG G
Sbjct: 71 RIAAIGLLTIFLTSFLIVEGLILANGL--------------HTPNEKLEYVIILGAGLNK 116
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
S R+ E + +K + T I+SGG ++E+ + L
Sbjct: 117 DK--------ISLSLQHRLDEAIAYHKQYQDT----TFIVSGGQGINESISEAEAMRSYL 164
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ G+ + I E S TF+N FS IK+ + + + ++++++H+ R+ + + +
Sbjct: 165 VAHGIPQHQIIEEELSTSTFENFAFSKEYIKD-KTQKVGVITNSFHMLRALILARQQDLQ 223
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ S +++EY GI A
Sbjct: 224 AVGIPA-----------KSDLLTYPCFSIREYFGIWKA 250
>gi|116630379|ref|YP_819532.1| hypothetical protein LGAS_1839 [Lactobacillus gasseri ATCC 33323]
gi|238852784|ref|ZP_04643190.1| integral membrane protein [Lactobacillus gasseri 202-4]
gi|282850700|ref|ZP_06260075.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
gi|311111615|ref|ZP_07713012.1| putative membrane protein [Lactobacillus gasseri MV-22]
gi|116095961|gb|ABJ61113.1| hypothetical protein LGAS_1839 [Lactobacillus gasseri ATCC 33323]
gi|238834634|gb|EEQ26865.1| integral membrane protein [Lactobacillus gasseri 202-4]
gi|282558108|gb|EFB63695.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
gi|311066769|gb|EFQ47109.1| putative membrane protein [Lactobacillus gasseri MV-22]
Length = 373
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 95/243 (39%), Gaps = 31/243 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ W + +H L + + + + + ++ L ++
Sbjct: 128 LVALWTLYRLGVFHKLPGWLHSLVAGAALIAFYLLF-------VMYNFLLNLVLYQIVPR 180
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIIS 119
++K+ + +++LG G + S SRI + K + +I+S
Sbjct: 181 RYKQ--DYLIVLGAGLINGKKV-------SRLLGSRIDRAIAFSNKQYDKGHKRPKLIMS 231
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKNI-- 176
GG + L+E+ N ++ G + D I LE +S +T+QN +S ++ IK+
Sbjct: 232 GGQGKDEDLSEAEAMKNYAVKRGYDPDLILLEDKSTNTYQNMIYSKAVAIKDYGSDKFKA 291
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++ YHL R+ LY + + S + ++L ++E+ G+ I
Sbjct: 292 KFFTNNYHLFRAGLYAKMAHLKANGIGS-----------TTRFYFLPNATIREFAGVFIM 340
Query: 237 YYR 239
+ +
Sbjct: 341 HKK 343
>gi|304404431|ref|ZP_07386092.1| protein of unknown function DUF218 [Paenibacillus curdlanolyticus
YK9]
gi|304346238|gb|EFM12071.1| protein of unknown function DUF218 [Paenibacillus curdlanolyticus
YK9]
Length = 230
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 20/198 (10%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL----KHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+ S +LLF + W I+ +L L +RPL P+ ++I++LG
Sbjct: 11 RRRRKRSPLLLLFRIVAWMIVLGVLWCGYLLWLINDVKRPL--PRSLPKADVIIVLGAAL 68
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG-DPQKHGLAESIVYN 135
P ++ R+ LYK K +I++GG D + E+
Sbjct: 69 WSDKPSPGLK--------ERLDYAFGLYKLGKAD----KLILTGGLDGNGSTITEAEGMR 116
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L G+ D + +E ++ T++N FS + K +++V+ YH R+ ++
Sbjct: 117 RYLTARGIPNDKLLIENKATSTYENLLFSKQITDRGGMKQVLIVTHDYHSSRAAEIARYV 176
Query: 196 GINTKASCSDYLNAYYSI 213
G N K + + + I
Sbjct: 177 GFN-KPIMASFKSKVLKI 193
>gi|2194196|gb|AAB61133.1| GdmH [Staphylococcus gallinarum]
gi|86371663|gb|ABC94900.1| GdmH [Staphylococcus gallinarum]
Length = 330
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 51/236 (21%), Positives = 94/236 (39%), Gaps = 31/236 (13%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
WI + + +S+ F+ ++ I L + L + K
Sbjct: 103 WIIVTSPVAFFINKSLASYIFVVYIFIVSLLI-------YFLSLFISCFILSLFYSRRKV 155
Query: 65 DGNI--IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ NI I++LG+G P ++ SRI + S K ++SGG
Sbjct: 156 NNNIRYILVLGSGLIEDKVPPLLQ--------SRIDIGKNFFDSKKDA--DIKFLLSGGQ 205
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ ++E+ N L+ GV + I E +S T++N QFS +IK NI++ S+
Sbjct: 206 GKDERISEAQAMKNYLISQGVNENKIICENKSQSTYENLQFSKKLIKKN--TNILICSNN 263
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+H+ R+ + +YS+ + N++ T ++E I IL +
Sbjct: 264 FHILRAVFIAKKLKYQH----------FYSLGSKTKNYFFTNAFIRELIAILKMDW 309
>gi|110801440|ref|YP_698578.1| hypothetical protein CPR_1256 [Clostridium perfringens SM101]
gi|110681941|gb|ABG85311.1| conserved hypothetical protein [Clostridium perfringens SM101]
Length = 257
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 51/246 (20%), Positives = 94/246 (38%), Gaps = 45/246 (18%)
Query: 1 MLLSWIF---LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
++L +F L+ W KI + C + G I Y +
Sbjct: 44 IILYTLFIDKLLKLQWFKNVYKPMKILALICISIFIIVEGAIIF-----------YPKKS 92
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
L P N IV+LG G + R+ +T+ + + II
Sbjct: 93 LKP-----CNYIVVLGAGIR--------GENLTATLKDRLDKTIEYLEKTGFNGE---II 136
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-- 175
+SGG + E+ L+E+GV +D I LE ++ T++N +S +I+N+ GK
Sbjct: 137 VSGGQGPGESITEAYAMEKYLVENGVPKDKIVLENKATSTYENLNYSKKIIENLSGKPIK 196
Query: 176 ---IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
I++V++ +H RS L + G + Y + + + + +E+
Sbjct: 197 DLDILVVTTDFHAMRSNLLAKRNGYD----------KAYLYTSKTQWYLVPSMYAREFFA 246
Query: 233 ILIAYY 238
+Y+
Sbjct: 247 FCKSYF 252
>gi|219855730|ref|YP_002472852.1| hypothetical protein CKR_2387 [Clostridium kluyveri NBRC 12016]
gi|219569454|dbj|BAH07438.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 199
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 82/210 (39%), Gaps = 27/210 (12%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
F+L F + + + L+ +Q Y P K + I++LG
Sbjct: 10 FVLYFIIVIFLLA---LITEIQIIYFGENAKP---KKSDCIIVLGC--------RVYGST 55
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS R+ + + LY II+SGG ++E+ N L+ G++ +
Sbjct: 56 PSPFLIWRLNKGLELY----DKGYGDYIIVSGGKGPGENISEAKAMKNYLVYKGIDSSRV 111
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
+E +S+ T +N S +++ K ++VS+ YHLKR+ L + GI
Sbjct: 112 IMEDKSMSTMENLSNSKRVMEEKGLKTAVIVSNKYHLKRASLMAESHGIE---------G 162
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIAYY 238
+Y + + ++E + Y
Sbjct: 163 SYSGVFVYTYKNREITGYIREIPALWKYYL 192
>gi|260223391|emb|CBA33910.1| hypothetical protein Csp_B21400 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 256
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 80/209 (38%), Gaps = 6/209 (2%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
IGW +P +L+++L+ Y + +V+LG GT +
Sbjct: 50 IGWQPLPELLIRNLESRYPEIAPAADLSVYAG-VVVLGGGTAAGRLQQSHLQPLINDGGE 108
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ + + + ++ GDP G +E+ + ++ E +S
Sbjct: 109 RL--AVSAALALRHPALPLVYTGGEGDPAGGGPSEAARARQFYESFRIPAVQVRYEAESR 166
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
+T++NA ++ + +L++SA+H+ RS F+ G N A DY ++
Sbjct: 167 NTYENAVLTAKLPGVNPQDRWLLMTSAWHMPRSMATFEKAGWNVTAYPVDYRAEDVTVWT 226
Query: 216 LSANF---YLTELALKEYIGILIAYYRGN 241
+ +L L E +G+ G
Sbjct: 227 RYSLLGGVSDWQLVLNELVGLAAYRLTGR 255
>gi|110802817|ref|YP_698118.1| hypothetical protein CPR_0793 [Clostridium perfringens SM101]
gi|110683318|gb|ABG86688.1| conserved hypothetical protein [Clostridium perfringens SM101]
Length = 206
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 19/171 (11%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
KD ++LG G P ++ R+ E ++ K + +I+SGG
Sbjct: 42 KDVEYEIILGAGLYGDKPSPILQ--------ERLEEGLKYLK----LHPNTKVIVSGGQG 89
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IILVSS 181
+ ES + G+ + I E +S TFQN +FS +++ +++V+S
Sbjct: 90 SNEPIPESEAMKIFFVNKGINPNRIIEEDKSKSTFQNLEFSKKILEERHANKDEVLIVTS 149
Query: 182 AYHLKRSQLYFQHFGINTKASCSD---YLNAYY--SIIPLSANFYLTELAL 227
+HL R++ + I + S +L Y P L E L
Sbjct: 150 DFHLFRAKEIADYLNIKNEGLPSKTPIFLRVQYMVREFPAMIKLLLQEAFL 200
>gi|242243837|ref|ZP_04798281.1| membrane protein [Staphylococcus epidermidis W23144]
gi|242232681|gb|EES34993.1| membrane protein [Staphylococcus epidermidis W23144]
Length = 318
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ ++ L + I + I + + S+ + Q+ K +I++LG G
Sbjct: 106 PLIIINSLALWVATIAFSTIYSFIGY---LSWSTAFENHQYHKHVKLIMVLGAGIFSEEV 162
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ +R+ + + +Y S + II+SGG ++E++ L+
Sbjct: 163 TTLL--------AARLDKALSVYHSQRTK---PIIIVSGGQGPDEPISEALAMKRYLIAH 211
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHFGINT 199
V + I +E QS +T N +S S+I +M ++ V+S +H+ R+ + + ++
Sbjct: 212 NVPENYIFMENQSTNTRTNFLYSKSIIHSMMPTSSQMLCVTSQFHVLRALKFAKKAHLSF 271
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S + +L + + +++G++ Y
Sbjct: 272 DGIGS-----------RTPYHFLAQSMIIDFLGLMYQYK 299
>gi|213027677|ref|ZP_03342124.1| hypothetical protein Salmonelentericaenterica_37123 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 175
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 14/184 (7%)
Query: 10 VSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ L +K F+S L + + LL+ ++ Y + Q +
Sbjct: 4 IGLALLWFSRFQKTGKVFISVGWLALLLLSLQPVSDHLLRPIENRYP----TWQGPQKVE 59
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T P A S R+ E +RL+++ + +I +GG + +
Sbjct: 60 YIVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRA----NPGARLIFTGGVAKTNT 114
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++ + V GV R DI + DT + A I +LV+SA HL R
Sbjct: 115 VSTAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAI---GDAPFLLVTSASHLPR 171
Query: 188 SQLY 191
+ ++
Sbjct: 172 AMIF 175
>gi|326772953|ref|ZP_08232237.1| integral membrane protein [Actinomyces viscosus C505]
gi|326637585|gb|EGE38487.1| integral membrane protein [Actinomyces viscosus C505]
Length = 337
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 83/218 (38%), Gaps = 23/218 (10%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHL-QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ + F + LL L Q + QR + +++V+ G G P
Sbjct: 110 WALLVAALMFCACAYLGVFLLIFLGQTAVQRIWGGRRAMPHPDVVVVHGAGLIDGKVGPL 169
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVYNNKLLESGV 143
+ SRI + ++ + +++ SGG ++E+ + + GV
Sbjct: 170 LG--------SRIAGGIEAWRDEEGLRPGVPLLVMSGGQGADEPVSEARAMADYAIARGV 221
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+ I LE +S T N ++ ++ ++LV+S++H R+ + G+
Sbjct: 222 PPERILLEDRSTTTRTNISYTRDLLAERGMVDPQVLLVTSSFHAVRTAILASDMGVPWAV 281
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + +A FY+ L+EY+ +L R
Sbjct: 282 APA-----------RTAWFYIVNAWLREYVAVLTYRRR 308
>gi|296138443|ref|YP_003645686.1| hypothetical protein Tpau_0710 [Tsukamurella paurometabola DSM
20162]
gi|296026577|gb|ADG77347.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 393
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 95/243 (39%), Gaps = 23/243 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M L+ + + HLL I ++ +L+ I ++ L + Y
Sbjct: 124 MGLALLAEVFLGAHLLHALTEGISAVTAVLLVALLIPGALVVLQLAAY--TVYAVVHRRL 181
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D ++V+LG+G P +R SR+ + ++ ++ SG
Sbjct: 182 PGGRDAGVVVVLGSGLNGERLTPLLR--------SRMDLGISEFRRLVDDGGDPFLVCSG 233
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIIL 178
G +AE L G+ + + E +S T +N ++S+ ++ + +++
Sbjct: 234 GRGHDEVIAEGEAMARYALAQGIPSNRLLREVRSTTTEENLRYSAELLASEGIAWTRMLV 293
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+S++H R+ + G+ A + +A ++ L+E++ +++ Y
Sbjct: 294 TTSSFHALRAGSLTRRLGLPATALGAP-----------TALYFRPAAFLREFVAVVVHYR 342
Query: 239 RGN 241
R N
Sbjct: 343 RAN 345
>gi|241896247|ref|ZP_04783543.1| integral membrane protein [Weissella paramesenteroides ATCC 33313]
gi|241870488|gb|EER74239.1| integral membrane protein [Weissella paramesenteroides ATCC 33313]
Length = 359
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 84/215 (39%), Gaps = 33/215 (15%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
L+F F+ + I + +L L + K + + I++LG G +
Sbjct: 149 VILYLVFWFLAF--ITSFILTRLY----------RPKYNQDYIIVLGAGLLNGKDV---- 192
Query: 87 IEPSFQSYSRIFETMRLY-KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
S SRI + K ++ + +I SGG L E + + G +
Sbjct: 193 ---SPLLASRIQIALDFANKQFEKTGYYPWLIFSGGQGGDEKLPEGVAMAEYAKQHGAQS 249
Query: 146 DDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ +E QS T++N FS ++ +++ N + +S YH R+ Y + G+
Sbjct: 250 SHVLIEDQSKTTYENMLFSKKILQARDLNLANGLFATSDYHTFRAAGYARLVGLQIDGLG 309
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ ++ F++ ++EYI +L +
Sbjct: 310 A-----------KTSRFFIPNAFIREYIALLANHK 333
>gi|302524814|ref|ZP_07277156.1| predicted protein [Streptomyces sp. AA4]
gi|302433709|gb|EFL05525.1| predicted protein [Streptomyces sp. AA4]
Length = 329
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 80/178 (44%), Gaps = 24/178 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+V+LG+G P + SR+ +++ +Q S +++SGG
Sbjct: 157 RAAAVVVLGSGLQGDRVPPLL--------ASRLDRAVQV----QQRSPGAVLVVSGGQGA 204
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL-VSSAY 183
+E+ L+E+GV + + LE ++ T +N +FS +++ IL V++ Y
Sbjct: 205 DELTSEAAAMARYLVEAGVPEEQLVLEDRATTTSENLRFSVALLAERGFSGPILAVTNNY 264
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
H+ R+ + + G+ + +A++++ L+E++ +L+ Y + N
Sbjct: 265 HVFRTAVLARQLGLRLNVIGA-----------RTASYFVPSAFLREFVALLVEYRKTN 311
>gi|113477800|ref|YP_723861.1| hypothetical protein Tery_4400 [Trichodesmium erythraeum IMS101]
gi|110168848|gb|ABG53388.1| protein of unknown function DUF218 [Trichodesmium erythraeum
IMS101]
Length = 273
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 53/255 (20%), Positives = 95/255 (37%), Gaps = 22/255 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIR-KIFFMSCFMLLFSFIGWGII-PTILLKHLQ-FSYQRPLLS 59
S I L+ + + I+ + L+ I + + ++ + + +S
Sbjct: 18 FSIILLVYATTLISGGGIKNPAPALIITALIVMIISSAPVFAVWSAQQVEEDAIEIVSVS 77
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ + IVLLG GTT P +P ++ RI LYK + II+S
Sbjct: 78 ACCDEKADAIVLLGQGTTQ-PIVPDRIQIQLTKTAERITYAAELYK----KGLAPYIIVS 132
Query: 120 GGD--PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-I 176
G + E+ L+ V R I +E S +++A + ++ +
Sbjct: 133 AGPRIGEDINTIEAEDITRVLVLLNVPRTAIIIEPHSSTVYESAIETREILNERGLDPTV 192
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSD-----------YLNAYYSIIPLSANFYLTEL 225
ILVSSA ++R+ L F G+ + +D Y P + LT
Sbjct: 193 ILVSSAIQIRRASLTFTDIGMKVIPAPTDFNTVNPYENSSYRFVLADFFPNTEAISLTTE 252
Query: 226 ALKEYIGILIAYYRG 240
+EY+ + + RG
Sbjct: 253 VWEEYLALFYYFLRG 267
>gi|293392078|ref|ZP_06636412.1| molybdate ABC transporter permease protein [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290952612|gb|EFE02731.1| molybdate ABC transporter permease protein [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 247
Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 22/228 (9%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ C+++ ++ + ++L+ + IL L L+ + K IVLLG
Sbjct: 31 IRCKAVGRLCALLGILILYV-VSIPYTAQILKDRL---VTEDHLTLEDYKQAQAIVLLGG 86
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + A S + E +R Y + Q ++ISG G +E+ V
Sbjct: 87 GVRDSKELYAP-----LASSATQLERLR-YAAYLQKETQLPLLISG--VSPTGASEAKVS 138
Query: 135 NNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+LL+ V LE +SL T +NA ++ +++ IILV++ +H++R++L F+
Sbjct: 139 AQELLDFFHVPTK--WLEEKSLTTKENALYTRQLLEKEGINKIILVTNEWHMQRAKLLFE 196
Query: 194 HFGINTKAS-------CSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
G + Y IP + LKE++G L
Sbjct: 197 GQGFQVLPASVGEGITPEAYSLNMMHFIPQAGAIAKNMQLLKEWMGYL 244
>gi|327440297|dbj|BAK16662.1| uncharacterized conserved protein [Solibacillus silvestris StLB046]
Length = 190
Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 76/187 (40%), Gaps = 27/187 (14%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+L + +V+LG PS +R+ + K
Sbjct: 29 VLKNEADGSNEYVVILGA-------KVKPGGIPSQSLKNRLDAAVDYLKRYPTVKA---- 77
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I++GG E+ V + L++ GV + I LE QS T++N F+ ++ + +I
Sbjct: 78 IVTGGQGADEDRTEASVMADYLIKHGVAENRISLEDQSTTTYENLLFAKKLLPD-NTASI 136
Query: 177 ILVSSAYHLKRSQLYFQHFGI--NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++S+ +HLKR+ + + G+ + A+ + + S ++E + I+
Sbjct: 137 TIISNDFHLKRATILARKLGLKADVVAAPTPKVINTKSR-------------IRERLAII 183
Query: 235 IAYYRGN 241
AY RG
Sbjct: 184 KAYTRGQ 190
>gi|326405987|gb|ADZ63058.1| conserved hypothetical protein [Lactococcus lactis subsp. lactis
CV56]
Length = 194
Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 78/217 (35%), Gaps = 30/217 (13%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ F+ L I + IL K + + D I++LG+
Sbjct: 7 IIGAFVGLILLIPVICLALILSKSTDR-------TAENSTDIKTILVLGSRINQNK---- 55
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+P+ + R+ + L K ++ II+SG ++E+ N L+ +
Sbjct: 56 ---KPAKITQERLDAALLLAK----NNPQAKIIVSGAKGADEPVSEAFSMKNYLITHHIR 108
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
D I E ++ DT +N +S ++V+S +HL R+ + G+ + +
Sbjct: 109 ADRIISEDKAGDTAENIAYSKKYFDG----KTVIVTSDFHLYRALYLAKQEGVKVEGFAA 164
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
FY E +G++ A+ G
Sbjct: 165 KTKVNNL--------FYYPNYYGHEILGLIYAFVFGK 193
>gi|323463635|gb|ADX75788.1| membrane protein [Staphylococcus pseudintermedius ED99]
Length = 317
Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 45/238 (18%), Positives = 97/238 (40%), Gaps = 31/238 (13%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLK-HLQFSYQRPLLSPQ 61
L+ + LI+ LL + F LL I+ + +L ++ P
Sbjct: 91 LAIVALIIG--SLLVIPLIPAVLTIPFQLLVQL---AIVFLTAWQTYLFMTFTFLHHLPP 145
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ I++LG G P ++ +R+ + L + ++ II+SGG
Sbjct: 146 VTRAN--IIVLGAGIYTEAVTPMLK--------ARLDRAIALSRQLEK----FHIIVSGG 191
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
++E++ L++ G+ I +E QS +T QN +S + Q + I+V+S
Sbjct: 192 QGPDEPISEALAMQRYLIQQGIAPKQITMEDQSTNTRQNIYYSKHYLALHQQPHTIIVTS 251
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++H+ R+ + ++ + + + +++ +++Y G+L Y R
Sbjct: 252 SFHILRALRLAERQQLHAFGYGAP-----------TPHHWVSRELIRDYSGLLFQYPR 298
>gi|296110233|ref|YP_003620614.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154]
gi|295831764|gb|ADG39645.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154]
Length = 314
Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF-ETMR 102
+L L ++ P++ K+ II LG+G T+ S SRI
Sbjct: 116 WVLTFLASYMITKVVHPKFNKEYAII--LGSGLLNGDTV-------SPLLGSRIMVAANF 166
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
+ K++ +I+SGG + L E+ + GV DI +E QS +T+QN
Sbjct: 167 KNQQFKKNKKTMKLIMSGGQGKDELLPEAEAMKAYAIMHGVAESDILVENQSKNTYQNML 226
Query: 163 FSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF 220
FS +++ + I ++ YH+ R+ + G+N + S ++ +
Sbjct: 227 FSKQVVEKNGFNLQKGIFATNDYHVFRAAGFAHLVGLNIEGIGS-----------KTSKY 275
Query: 221 YLTELALKEYIGIL 234
+L ++EYI IL
Sbjct: 276 FLPNALIREYIAIL 289
>gi|221195587|ref|ZP_03568642.1| integral membrane protein [Atopobium rimae ATCC 49626]
gi|221184774|gb|EEE17166.1| integral membrane protein [Atopobium rimae ATCC 49626]
Length = 346
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 42/241 (17%), Positives = 89/241 (36%), Gaps = 29/241 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ ++ I + + + + F+ L F W + L + Y+ + P
Sbjct: 110 LPIALALFIFLMYCIPIYASQDGLFLEVLPLFFFEGLWFSFTFVALLFYSWLYR---ILP 166
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + + I++ G G P + RI + L+K + SG
Sbjct: 167 R-HRRYDYIIIHGAGLDGEKPTPLL--------AGRINRALELWKRQDCCG---KFVASG 214
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI---KNMQGKNII 177
G + E+ L+E GV ++ I +E +S T++N ++S ++ Q
Sbjct: 215 GQGDDEVVTEAQAMRGYLMEHGVSQETILMEDRSRTTWENLKYSQMLMNADAQYQDYTAA 274
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+V+S +H+ R Y + G+ S + +Y ++E+ I A+
Sbjct: 275 MVTSDFHVFRCAEYAHNLGLKADGVGSH-----------TGGWYWPTAFIREFAAITKAH 323
Query: 238 Y 238
+
Sbjct: 324 F 324
>gi|295093712|emb|CBK82803.1| Uncharacterized conserved protein [Coprococcus sp. ART55/1]
Length = 282
Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 46/245 (18%), Positives = 95/245 (38%), Gaps = 29/245 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSI----RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
+L + +F +++ + + I RK++ + SF+ + + L + +
Sbjct: 62 LLGTGVFALLTLYGVFRAKIDKSVRKLWNKKAGKICLSFVLALVTAALALVVVITYHMVY 121
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ K+D +V+LG PS R+ + +
Sbjct: 122 AAHVKPKQDAT-VVVLGCAVR--------GGGPSLMLRERLIAA----QDYLDETPEAVC 168
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKN 175
++SGG ++E+ L E G+ + I +E +S T +N +FS+ +I+
Sbjct: 169 VVSGGQGADESMSEAQCMYEYLTEHGIAPERIYMEDKSTSTRENIKFSAEIIRQNGLPDK 228
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +V++ +H R++ GI T SI +A + L ++E GIL
Sbjct: 229 MNIVTNEFHEYRAKRIADKQGIET-----------GSIAGSTAWWLLPTYYVREMAGILY 277
Query: 236 AYYRG 240
+ G
Sbjct: 278 EWISG 282
>gi|15672393|ref|NP_266567.1| hypothetical protein L17153 [Lactococcus lactis subsp. lactis
Il1403]
gi|12723285|gb|AAK04509.1|AE006277_9 hypothetical protein L17153 [Lactococcus lactis subsp. lactis
Il1403]
Length = 194
Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 77/217 (35%), Gaps = 30/217 (13%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ F+ L I + IL K + + D I++LG+
Sbjct: 7 IIGAFVGLILLIPVICLALILSKSTDR-------TAENSTDIKTILVLGSRINQNK---- 55
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+P+ + R+ + L K ++ II+SG ++E+ N L+ +
Sbjct: 56 ---KPAKITQERLDAALLLAK----NNPQAKIIVSGAKGADEPVSEAFSMKNYLITHHIR 108
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
D I E ++ DT +N +S ++V+S +HL R+ + G+ + +
Sbjct: 109 ADRIISEDKAGDTAENIAYSKKYFDG----KTVIVTSDFHLYRALYLAKQEGVKVEGFAA 164
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
Y E +G++ A+ G
Sbjct: 165 KTKVNNL--------LYYPNYYGHEILGLIYAFVFGK 193
>gi|23012908|ref|ZP_00052888.1| COG1434: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 266
Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 42/241 (17%), Positives = 92/241 (38%), Gaps = 22/241 (9%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W L + + + +L +F+ + ++ ++ P P+ +
Sbjct: 30 LSRRWLSLGRKV-----LGVTLLTVTFMAVVPLEYWAETWMEARFRAPNPLPE---KVDG 81
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
I++LG + + ++ +R+ + L K + ++ SGG
Sbjct: 82 IIVLGGAINPVVSEARGQVSVGG-GVTRMTTLIPLAKRYPE----ARLVFSGGSGSPFNP 136
Query: 129 A--ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E+ + G + D I E S +T +NA S +++ G+ +L++SA H+
Sbjct: 137 ELREADYAKIFYDDLGFDTDRIVFERDSRNTRENATLSKELMQPRPGETWLLITSAGHMP 196
Query: 187 RSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSANFYLTELA--LKEYIGILIAYYR 239
RS F+ G DY +++ + S + LA + E +G+++
Sbjct: 197 RSVGCFRAVGWPVVPIPVDYYTTGLDKPWWTELRFSPQKGIFGLAPLIHEGLGLVMYRLM 256
Query: 240 G 240
G
Sbjct: 257 G 257
>gi|329118151|ref|ZP_08246863.1| protein of hypothetical function DUF218 [Neisseria bacilliformis
ATCC BAA-1200]
gi|327465811|gb|EGF12084.1| protein of hypothetical function DUF218 [Neisseria bacilliformis
ATCC BAA-1200]
Length = 222
Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 30/228 (13%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
H+L S+ + F +S ++L F+ Y+ G+ V+LG
Sbjct: 12 HILWGSLWRGFAISVALVLLFFVWCAW----------SVYRTGRDGLPQGYTGDAAVVLG 61
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
A PS RI + LY+S + ++ +GG +K ++E V
Sbjct: 62 A--------AAWDARPSPVFRERINHAVGLYRSGRVR----KLVFTGGAVKKGYMSEGEV 109
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ GV +DI LE +S T++N + + ++ + I++VS HL R+ +
Sbjct: 110 GRRYALKQGVPAEDILLENKSRTTYENLAYLRAPLREAGLRKIVIVSDPPHLARAAAVAR 169
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
G++ + S + Y+ F L+E + +L YY
Sbjct: 170 DLGLDAQVSPTP--TTRYAEGGSRFKFQ-----LRETV-LLAGYYLWR 209
>gi|256843883|ref|ZP_05549370.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|312984074|ref|ZP_07791422.1| putative membrane protein [Lactobacillus crispatus CTV-05]
gi|256613788|gb|EEU18990.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|310894576|gb|EFQ43650.1| putative membrane protein [Lactobacillus crispatus CTV-05]
Length = 367
Score = 118 bits (295), Expect = 9e-25, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 93/243 (38%), Gaps = 33/243 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS-YQRPLLSP 60
L+ I +++ L + + + ++ + ++ L+ L + Y R
Sbjct: 123 LIISIIVLLGPGKYLPRWLSLALASIPAIAIYLGL---VLYNFLVNLLLYQIYPR----- 174
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIIS 119
+ +++LG+G + S +RI ++ + ++ +I+S
Sbjct: 175 --TYHQDYLIVLGSGLINGDQV-------SKLLAARINRAIQYSNRQYQKGRKRPILIMS 225
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NI 176
GG ++E++ + GV D I LE QS +T++N FS + G
Sbjct: 226 GGQGADEKISEALAMSRFAQRRGVSVDRILLEDQSKNTYENMLFSKRIATKDFGNSHFRA 285
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 286 RFFSNNYHIFRAALLAKEVGLKANGVGA-----------YTRFYYLPNAIIREFAGVFVM 334
Query: 237 YYR 239
+ R
Sbjct: 335 HKR 337
>gi|295693841|ref|YP_003602451.1| integral hypothetical protein [Lactobacillus crispatus ST1]
gi|295031947|emb|CBL51426.1| Integral membrane protein [Lactobacillus crispatus ST1]
Length = 367
Score = 118 bits (295), Expect = 9e-25, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 92/243 (37%), Gaps = 33/243 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS-YQRPLLSP 60
L+ I +++ L + + + ++ + ++ L+ L + Y R
Sbjct: 123 LIISIIVLLGPGKYLPRWLSLALASIPAIAIYLGL---VLYNFLVNLLLYQIYPR----- 174
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIIS 119
+ +++LG G + S +RI ++ + ++ +I+S
Sbjct: 175 --TYHQDYLIVLGAGLINGDQV-------SKLLAARINRAIQYSNRQYQKGRKRPILIMS 225
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NI 176
GG ++E++ + GV D I LE QS +T++N FS + G
Sbjct: 226 GGQGADEKISEALAMSRFAQRRGVSVDRILLEDQSKNTYENMLFSKRIATKDFGNSHFKA 285
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 286 RFFSNNYHIFRAALLAKEVGLKANGVGA-----------YTRFYYLPNAIIREFAGVFVM 334
Query: 237 YYR 239
+ R
Sbjct: 335 HKR 337
>gi|227878426|ref|ZP_03996366.1| integral membrane protein [Lactobacillus crispatus JV-V01]
gi|256849554|ref|ZP_05554986.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|262046222|ref|ZP_06019185.1| conserved hypothetical protein [Lactobacillus crispatus MV-3A-US]
gi|227861955|gb|EEJ69534.1| integral membrane protein [Lactobacillus crispatus JV-V01]
gi|256713670|gb|EEU28659.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|260573552|gb|EEX30109.1| conserved hypothetical protein [Lactobacillus crispatus MV-3A-US]
Length = 361
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 93/243 (38%), Gaps = 33/243 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS-YQRPLLSP 60
L+ I +++ L + + + ++ + ++ L+ L + Y R
Sbjct: 123 LIISIIVLLGPGKYLPRWLSLALASIPAIAIYLGL---VLYNFLVNLLLYQIYPR----- 174
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIIS 119
+ +++LG+G + S +RI ++ + ++ +I+S
Sbjct: 175 --TYHQDYLIVLGSGLINGDQV-------SKLLAARINRAIQYSNRQYQKGRKRPILIMS 225
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NI 176
GG ++E++ + GV D I LE QS +T++N FS + G
Sbjct: 226 GGQGADEKISEALAMSRFAQRRGVSVDRILLEDQSKNTYENMLFSKRIATKDFGNSHFRA 285
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 286 RFFSNNYHIFRAALLAKEVGLKANGVGA-----------YTRFYYLPNAIIREFAGVFVM 334
Query: 237 YYR 239
+ R
Sbjct: 335 HKR 337
>gi|238021623|ref|ZP_04602049.1| hypothetical protein GCWU000324_01525 [Kingella oralis ATCC 51147]
gi|237866237|gb|EEP67279.1| hypothetical protein GCWU000324_01525 [Kingella oralis ATCC 51147]
Length = 213
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 74/184 (40%), Gaps = 21/184 (11%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ F+ + +F+ W YQ K + V+LG
Sbjct: 11 RYGFLLSILSIFALQAWCA---------WQVYQYAHAPAALPKHADAAVVLGA------- 54
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
A +PS RI + LY+S + +I +GG ++ +E V L+
Sbjct: 55 -AAWGDKPSPVFRERINHAIALYQSERVE----KLIFTGGTRKEGYPSEGEVARKFALKQ 109
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ DI ET+S DT+QN + +++ + ++I+VS YH+ R+ + GI
Sbjct: 110 GIPSHDIIYETRSKDTYQNLVNTRLLMQKHKLHHVIIVSDPYHMARAIAIARDLGIPATP 169
Query: 202 SCSD 205
S +
Sbjct: 170 SPTP 173
>gi|167754637|ref|ZP_02426764.1| hypothetical protein CLORAM_00139 [Clostridium ramosum DSM 1402]
gi|167705469|gb|EDS20048.1| hypothetical protein CLORAM_00139 [Clostridium ramosum DSM 1402]
Length = 209
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 73/176 (41%), Gaps = 25/176 (14%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ K + +++LG P +R R+ + ++ II+SG
Sbjct: 51 KYNKRSDFLIVLGARLYGDKPAPLLRY--------RLDAAVEYHQKF----PDVPIIVSG 98
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IIL 178
G + E+ + L+ G++ I E +S +T +N +S +I+ ++ +++
Sbjct: 99 GQGHGENITEAKAMKDYLINKGIDESLIIEENKSTNTNENIIYSKKIIETSPTEDYEVVI 158
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ +H RS+L G+ + + + ++Y L+E+ G L
Sbjct: 159 ITNGFHCYRSKLLANKHGLEAHTYAA------RENLDTAPHYY-----LREFFGCL 203
>gi|158321219|ref|YP_001513726.1| hypothetical protein Clos_2195 [Alkaliphilus oremlandii OhILAs]
gi|158141418|gb|ABW19730.1| protein of unknown function DUF218 [Alkaliphilus oremlandii OhILAs]
Length = 191
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++I++LG P ++ R+ +T+ LY TII+SG
Sbjct: 34 PVQSDVIIVLGARLYGDKPSPMLQY--------RLEKTLTLYNE----GFADTIIVSGAR 81
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ E++ L+ +GV I E S T++N +S++++K K+ I+VS++
Sbjct: 82 GDDELITEALAMKIYLMNNGVPESAILEEDHSYSTYENLSYSNAIMKEKDLKSAIIVSNS 141
Query: 183 YHLKRSQLYFQHFGINTKASCS-DYLNAYYS 212
+H+ R+ + + ++ + + +Y N + +
Sbjct: 142 FHMSRALMIAKRLDMSASGAAAKNYPNIFLT 172
>gi|28211594|ref|NP_782538.1| membrane associated protein [Clostridium tetani E88]
gi|28204035|gb|AAO36475.1| membrane associated protein [Clostridium tetani E88]
Length = 192
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
++ I +GII T++L + + R + + + I++LG P ++
Sbjct: 7 VIIYSILFGIILTLILGMNIYLFGRNSKA----EKSDCIIILGCSVYGETPSPFLQW--- 59
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
RI E RLYK I+ SGG ++E+ L+ G++ + I
Sbjct: 60 -----RIEEGYRLYKEGYGRY----ILASGGKGPGESISEAEAMKRYLISKGIKEEYIIK 110
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E +S T +N + + +++ KN ++VS+ YHLKR+ L + GI++ S Y+ +Y
Sbjct: 111 EDKSTSTMENLKNCNKIMEKKGLKNAVIVSNKYHLKRASLMTKKVGIDSSFSGV-YVTSY 169
Query: 211 YSIIPLSANFYLTELALKEYIGILIAY 237
+ ++E +L Y
Sbjct: 170 KK--------HEIYGFIREIPALLKFY 188
>gi|42519856|ref|NP_965786.1| hypothetical protein LJ1807 [Lactobacillus johnsonii NCC 533]
gi|41584146|gb|AAS09752.1| hypothetical protein LJ_1807 [Lactobacillus johnsonii NCC 533]
Length = 373
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 93/239 (38%), Gaps = 31/239 (12%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
W + +H L + + + + + ++ LL + + ++P+ +
Sbjct: 132 WTLNRLGVFHRLPDWLHSLVAGATLIAFYLLF---VMYNFLLNLVLYQ-----ITPR-RY 182
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIISGGDP 123
+ +++LG G + S +RI + K + +I+SGG
Sbjct: 183 KQDYLIVLGAGLIDGKKV-------SRLLGARIDRAIAFSNKQYDKGHKRPKLIMSGGQG 235
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVS 180
+ L+E+ + ++ G + + I LE +S +T+QN +S + + G +
Sbjct: 236 KDEDLSEAAAMKDYAVKHGYDPNLILLEDKSTNTYQNMLYSKKVATSDWGNPNFKAKFFT 295
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHL R+ LY + + + + ++L ++E+ G+ I + +
Sbjct: 296 NNYHLFRAGLYAKMAHLKANGVGA-----------TTRFYFLPNATIREFAGVFIMHKK 343
>gi|290893680|ref|ZP_06556661.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|290556753|gb|EFD90286.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
Length = 189
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 85/218 (38%), Gaps = 33/218 (15%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+R++ +S ++ FI I+ + + + + +++LG
Sbjct: 1 MRRLKRISIILIAIGFIYLLIVAAFMFSG---------TRAKPSDNADTVLILGAKVNGD 51
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P PA ++ R+ + + + +++SGG + +E+ V L+
Sbjct: 52 PAEPAEVLK------ERLDAAV----TYLNENPTMQVVVSGGQGEDESASEASVMEEYLV 101
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
G+ R IK+E +S T +N ++S ++V+S YH+ R+ + + G++
Sbjct: 102 NKGITRSRIKIENKSRRTEENIKYSKE---KFNLGKTVIVTSDYHMYRALMLAKRQGLDA 158
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ S + + ++E + I A+
Sbjct: 159 SGLPA-----------KSRSVIKIKNMMRETLSITYAW 185
>gi|262375317|ref|ZP_06068550.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262309571|gb|EEY90701.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 379
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/193 (22%), Positives = 79/193 (40%), Gaps = 22/193 (11%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ +P S Q IV+LG G T+ I + + R+ T+ + K +
Sbjct: 201 EQQQAKPANSSQPY----AIVVLGGGLTLDDQ--GKEIIVNNYTRLRLETTLAVEKHYQ- 253
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
I++SG E+ L GV+ LE +S++T +N +FSS +++
Sbjct: 254 ----LPIVLSG--------VEAPYMQRWLKNHGVDAK--LLEDRSMNTCENTRFSSLLLQ 299
Query: 170 NMQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
G +IL++ YH+ R++ F GI T + P + N+ + A
Sbjct: 300 KKGGAPTVILITDRYHMPRTRRLFALNGIQTIPVEAPMPTPLTRWRPSAQNYDHSRRANY 359
Query: 229 EYIGILIAYYRGN 241
E + + + G+
Sbjct: 360 EMLATMRDMWFGS 372
>gi|150016674|ref|YP_001308928.1| hypothetical protein Cbei_1801 [Clostridium beijerinckii NCIMB
8052]
gi|149903139|gb|ABR33972.1| protein of unknown function DUF218 [Clostridium beijerinckii NCIMB
8052]
Length = 251
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 86/231 (37%), Gaps = 31/231 (13%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
++ Y + + F F +L I G I + ++ +Y + K + +
Sbjct: 41 LIIYHFIKRRIESNKFIYRYFRVLKVLICIGGIFFLGIEIFIINYPKY-----NKGNADY 95
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
I++LG G PS R+ + + I++SGG L
Sbjct: 96 IIVLGAGLDTNSN-------PSLILQGRLDAALEYIQEDDYRF----IVLSGGQGSDEKL 144
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-----NIILVSSAY 183
ES LL GV+ + + +E S +T +N +FS + I+ GK NI +V+S +
Sbjct: 145 PESHAMKKYLLNRGVDEEKVIIEDNSRNTDENLKFSKAKIEENSGKSLDKLNIKIVTSDF 204
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
H RS + + G Y + + + + +E I+
Sbjct: 205 HALRSSILAKRNGY----------VNYSNYSSRTVWYLIPITYTREAFAIV 245
>gi|255023117|ref|ZP_05295103.1| hypothetical protein LmonocyFSL_06015 [Listeria monocytogenes FSL
J1-208]
Length = 189
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/218 (17%), Positives = 82/218 (37%), Gaps = 33/218 (15%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+R + M +++ FI I+ + + ++ + +++LG
Sbjct: 1 MRSLKKMVVILIIIGFIYLLIVAAFMFS---------CSRTKPIENADTVLILGAKVNGD 51
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P + PS R+ + + + +I+SGG AE+ V L+
Sbjct: 52 PAV------PSLVLQERLDAAVAYLNEYPKVN----VIVSGGQGADESTAEAEVMEEYLV 101
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
G+ R I +ET+S T +N ++S+ + ++V+S YH+ R+ + + GI+
Sbjct: 102 NEGIARKRIAMETKSKRTEENIKYSNE---KFELGKTVIVTSDYHMYRALMLAKRQGIDA 158
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ ++E + I A+
Sbjct: 159 SGLPAKSRTPAKYKG-----------MMREVLSITYAW 185
>gi|149184051|ref|ZP_01862406.1| hypothetical protein BSG1_09543 [Bacillus sp. SG-1]
gi|148848239|gb|EDL62534.1| hypothetical protein BSG1_09543 [Bacillus sp. SG-1]
Length = 245
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/237 (17%), Positives = 87/237 (36%), Gaps = 34/237 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L FL +SY + + R I + + + + +LL + +
Sbjct: 37 LFFAAFLYLSYPLIEKRIWRHIHRALLIGYVLFLMSFTAVQVLLLMEMGS---------E 87
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
D I++LG G + R+ + + + +I+SGG
Sbjct: 88 APDDIQQIIILGAGLKGEEISQTLET--------RLEAGVEYLR----KNPEIPVIVSGG 135
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILV 179
+ + ES + L+ G+ + I E +S TF+N S +++ I+++
Sbjct: 136 QGEGEDIPESTAMSRYLVSHGISSNRITEEDRSTTTFENLLNSKRILERKGAEDDRILII 195
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+S YH+ R++L + G++ + S F ++EY ++ A
Sbjct: 196 TSDYHVFRAKLTGKKIGLDCSGLGGE-----------SGFFIKINYMIREYFAVVKA 241
>gi|257064629|ref|YP_003144301.1| hypothetical protein Shel_19360 [Slackia heliotrinireducens DSM
20476]
gi|256792282|gb|ACV22952.1| uncharacterized conserved protein [Slackia heliotrinireducens DSM
20476]
Length = 246
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/245 (19%), Positives = 87/245 (35%), Gaps = 32/245 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLL--FSFIGWGIIPTILLKHLQFSYQRPL-- 57
+ ++ + + +LC F L F+ I + +L+ + L
Sbjct: 27 MFFAVWYAIGFALILCGW---GVHAGAFDALPRFAHISIAGLSVVLIAGFLVAAGCSLSG 83
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ D + IV+LG PS R+ + I
Sbjct: 84 FDEHGEPDLDCIVVLGA--------QMKADGPSIVLRLRLDAAY----DYLVENPETVCI 131
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGG + E+ + L+E G++ I E S +T +N + SS+ +
Sbjct: 132 VSGGQGPNEPITEADGMADYLIERGIDESRIIRENTSTNTVENIRNSSAFFDAEH-DRVG 190
Query: 178 LVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+V++ +H+ RS Q G+ N +D S +YL L+E +GI
Sbjct: 191 IVTNNFHVFRSVRIAQAQGVQNVCGISAD-----------SVAWYLPNNILRESMGIAKD 239
Query: 237 YYRGN 241
+GN
Sbjct: 240 LLKGN 244
>gi|259047668|ref|ZP_05738069.1| membrane protein [Granulicatella adiacens ATCC 49175]
gi|259035859|gb|EEW37114.1| membrane protein [Granulicatella adiacens ATCC 49175]
Length = 343
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 44/236 (18%), Positives = 98/236 (41%), Gaps = 25/236 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L+ F ++ L Q + +++ F++ F + + Y +
Sbjct: 105 LILLFFGVIIIRALNNQYFYENHWLNIFLIFFIY---SYVIFGFAFFGFLFYSILYVFIP 161
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+K + I++ G G + R+ P + RI + + +K K + + +I SGG
Sbjct: 162 KRKQYDFIIIHGAGL-----LDGERVTPLLKC--RIDKAVEAFK--KSKNPNIKLIASGG 212
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILV 179
++E+ N L+E V R+ + LE +S T++N FS + + ++ + V
Sbjct: 213 KGADEKISEAHAILNYLMEETDVPRESVLLEEESRTTYENLLFSKRLGETFLKEPRFLFV 272
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++ YH+ R+ Y + G+ +A++Y+ ++EY+ + +
Sbjct: 273 TNDYHVFRTSTYAKMIGMQGDGLGC-----------TTASYYIPSAFIREYVALCV 317
>gi|56476276|ref|YP_157865.1| hypothetical protein ebA1532 [Aromatoleum aromaticum EbN1]
gi|56312319|emb|CAI06964.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 248
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 46/230 (20%), Positives = 84/230 (36%), Gaps = 21/230 (9%)
Query: 12 YWHLLCQSIRKIFFMSCF-MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
Y ++ + ++C M+ FS +G+ Q P IV
Sbjct: 30 YAKNWKRTGSSLAVVACGGMIAFSLVGFDNFARSPW------PQVPERIALPYPRAEAIV 83
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG-LA 129
+LG G + + S R+ +LY+ I++SGG P G +
Sbjct: 84 VLGAGRYLQAPEYDGDTA-AAGSLERVRYAAKLYR-----ETGLPILVSGGRPGDIGTRS 137
Query: 130 ESIVYNNKL-LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ + + L E V +E S DT QNA+ S+++++ I LV+ +H+ R+
Sbjct: 138 EAEIMQDILEQEFHVPVR--WVEPDSEDTQQNAERSAALLRAEGVTCIYLVTHGFHIDRA 195
Query: 189 QLYFQHFGINTKASCSDYLNAY----YSIIPLSANFYLTELALKEYIGIL 234
F G+ + ++ S +P + E + L
Sbjct: 196 AAQFHKHGLEVVPMATGFVRPQPDTVLSWLPSFEGVARNRGWIYETLAGL 245
>gi|254409849|ref|ZP_05023630.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196183846|gb|EDX78829.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 325
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 91/223 (40%), Gaps = 25/223 (11%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
+L + + P + + IV+LG GTT P +++ + + R
Sbjct: 102 STPFFSNLLAASTEQAVVTP--ESAAAQTASAIVVLGQGTTQPDEPPRTQVQLT-DTGDR 158
Query: 97 IFETMRLYKSCKQHSMHCTIIISGG-----DPQKHGLAESIVYNNKLLESGVERDDIKLE 151
I +LY+ + +++S G + + E+ + L++ GV + I LE
Sbjct: 159 ILYAAQLYRQ---SGNNPLVVVSAGPRPNLQGNQDQIVEANDIRSLLVQFGVPQSRIVLE 215
Query: 152 TQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHFGIN----------- 198
++ +A+ ++++ + LV+SAY+ +R+Q F+ G+N
Sbjct: 216 PTGINLRTSAEEVEDILRDRGIADNRVFLVTSAYNSRRAQQAFRSVGLNNVVAKPTGFFT 275
Query: 199 TKASCSDYLNAY-YSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ + +N + S IP +T ++E+ + Y RG
Sbjct: 276 VQPGTTSTINQWIESFIPSVEALTVTTRIVEEFYASIYYYLRG 318
>gi|157273409|gb|ABV27308.1| conserved hypothetical protein [Candidatus Chloracidobacterium
thermophilum]
Length = 256
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 81/236 (34%), Gaps = 18/236 (7%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII--V 70
W Q K + L + + G LL L+ + + I +
Sbjct: 30 WFSRWQRAGKTVTTVAAIGL-AVVSHGWTANALLAPLEQGQVMFAPLGEIPPEAQSIRWI 88
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
++ G S S R+ E +RL++ ++ SGG A
Sbjct: 89 VVLGGGVGGDEHMPPTECLSDASLRRLVEGIRLHRLL----PSARLVTSGGAVFTMRPA- 143
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
V + GV D I ++ +T + + +++ + +LV+SA H+ R+
Sbjct: 144 GEVMRDAACALGVSADRIVVQPIGRNTVEEVAAVARLVEQ---EPFLLVTSAVHMPRALE 200
Query: 191 YFQHFGINTKASCSDYLN-------AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ G+ + +D+ + P A +E A+ EY+G L R
Sbjct: 201 ACRKQGLRPLPAPTDFQATEPDGVWTPGDLYPSGAGLRQSERAMYEYLGHLRQRLR 256
>gi|293380584|ref|ZP_06626640.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
gi|290922852|gb|EFD99798.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
Length = 367
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 93/243 (38%), Gaps = 33/243 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS-YQRPLLSP 60
L+ I +++ L + + + ++ + ++ L+ L + Y R
Sbjct: 123 LIISIIVLLGPGKYLPRWLSLALASIPAIAIYLGL---VLYNFLVNLLLYQIYPR----- 174
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIIS 119
+ +++LG+G + S +RI ++ + ++ +I+S
Sbjct: 175 --TYHQDYLIVLGSGLINGDQV-------SKLLAARINRAIQYSNRQYQKGRKRPILIMS 225
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NI 176
GG ++E++ + GV D I LE QS +T++N FS + G
Sbjct: 226 GGQGADKKISEALAMSRFAQRRGVSVDRILLEDQSKNTYENMLFSKRIATKDFGNSHFRA 285
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 286 RFFSNNYHIFRAALLAKEVGLKANGVGA-----------YTRFYYLPNAIIREFAGVFVM 334
Query: 237 YYR 239
+ R
Sbjct: 335 HKR 337
>gi|254501304|ref|ZP_05113455.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222437375|gb|EEE44054.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 176
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 18/171 (10%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++ + IVLLG PS RI + + H+ II+ G
Sbjct: 7 PQRPADAIVLLGAAVWT-------GGRPSPTLLRRIE-----HAAALYHAGAAPIIVGCG 54
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
H AE+ V +L+ GV + I+ ET+S +T +NA FS+ +++ + +N ++VS
Sbjct: 55 GLGNHPPAEAEVMKRELIALGVPQSAIRTETRSRNTLENAVFSARILRREKLENTLIVSD 114
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
YHL R+ L FQ G + S S PL+ Y L+E +
Sbjct: 115 RYHLPRAVLCFQTLGFSATGSG---PGRSVSNTPLNKWLY---ACLRETVA 159
>gi|226330690|ref|ZP_03806208.1| hypothetical protein PROPEN_04610 [Proteus penneri ATCC 35198]
gi|225201485|gb|EEG83839.1| hypothetical protein PROPEN_04610 [Proteus penneri ATCC 35198]
Length = 240
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 10/186 (5%)
Query: 37 GWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
G + LL + YQ R L ++D N IV+LG G T P A S
Sbjct: 41 GIQPVADTLLMPSEKEYQARYELRENSQQDVNYIVVLGGGFTYNPE-WAPSANLLNNSLF 99
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ E +RLY + + T+I +GG ++ + V GV + +
Sbjct: 100 RVAEGVRLY----YRNPNATLIFTGGAGVNQ-ISSAEVAAQVAQSLGVPANKTIALSTPK 154
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
DT + A +I + +LV+SA HL R++ +F +N + ++ L + P
Sbjct: 155 DTEEEAYEVDKLI---GKQPFLLVTSANHLARAERFFLARRMNPIVAPANQLAITSPLHP 211
Query: 216 LSANFY 221
F+
Sbjct: 212 WEKYFF 217
>gi|18309791|ref|NP_561725.1| hypothetical protein CPE0809 [Clostridium perfringens str. 13]
gi|18144469|dbj|BAB80515.1| hypothetical protein [Clostridium perfringens str. 13]
Length = 206
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 14/144 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
KD ++LG G P ++ R+ E + + + +I+SG
Sbjct: 42 KDVEYEIILGAGLYGDKPSPILQ--------ERLEEGL----KYLELHPNTKVIVSGEQG 89
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IILVSS 181
+ ES N L+ G+ + I E +S TFQN +FS +++ +++V+S
Sbjct: 90 SNEPIPESEAMKNFLVNKGINPNRIIEEDKSKSTFQNLEFSKKILEERHADKDEVLIVTS 149
Query: 182 AYHLKRSQLYFQHFGINTKASCSD 205
+HL R++ + I + S
Sbjct: 150 DFHLFRAKEIADYLNIKNEGLPSK 173
>gi|228985374|ref|ZP_04145533.1| hypothetical protein bthur0001_20700 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228774327|gb|EEM22734.1| hypothetical protein bthur0001_20700 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 201
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG +PS +R+ + +I+SGG +
Sbjct: 54 YVLILGA--------KLFGDKPSLSLQNRLDVALE----YLYSHPEAKVIVSGGQGEDED 101
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 102 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENVKFSIDL---YDVKHAVVVSNTYHLYR 158
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + I Y ++EY+ I+
Sbjct: 159 TKIIAKRLGMKMEALAA------ETPIRSKRKMY-----VREYVAIM 194
>gi|313617350|gb|EFR89766.1| conserved hypothetical protein [Listeria innocua FSL S4-378]
Length = 189
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 79/216 (36%), Gaps = 35/216 (16%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K FF+ ++ F ++ I+ + + ++ N +++LG P
Sbjct: 5 KKFFVILIVIGFIYV--LIVAAFMFSG---------TRAKPDENVNTVLILGAKINGDPA 53
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
PS R+ + + +I+SGG E+ V L+
Sbjct: 54 T------PSLVLEERLDTAV----AYLNEYPKAKVIVSGGQGADESTTEAAVMEEYLVNE 103
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ R+ IK ET+S T +N ++S+ ++V+S YH+ R+ + + GIN
Sbjct: 104 GIARNRIKKETKSKRTEENIKYSNE---KFDLGKTVIVTSDYHMYRALMLAKRQGINATG 160
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ ++E + I A+
Sbjct: 161 LPAKSRTPAKYKG-----------MMREVLSITYAW 185
>gi|16801598|ref|NP_471866.1| hypothetical protein lin2536 [Listeria innocua Clip11262]
gi|16415058|emb|CAC97763.1| lin2536 [Listeria innocua Clip11262]
Length = 189
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 79/216 (36%), Gaps = 35/216 (16%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K FF+ ++ F ++ I+ + + ++ N +++LG P
Sbjct: 5 KKFFVILIVIGFIYV--LIVAAFMFSG---------TRAKPDENVNTVLILGAKINGDPA 53
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
PS R+ + + +I+SGG E+ V L+
Sbjct: 54 T------PSLVLEERLDTAV----AYLNEYPKAKVIVSGGQGADESTTEAAVMEEYLVNE 103
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ R+ IK ET+S T +N ++S+ ++V+S YH+ R+ + + GIN
Sbjct: 104 GIARNRIKKETKSKRTEENIKYSNE---KFDLGKTVIVTSDYHMYRALMLAKRQGINATG 160
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ ++E + I A+
Sbjct: 161 LPAKSRTPAKYKG-----------MMREVLSITYAW 185
>gi|329668109|gb|AEB94057.1| hypothetical protein LJP_1741 [Lactobacillus johnsonii DPC 6026]
Length = 373
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 38/239 (15%), Positives = 90/239 (37%), Gaps = 31/239 (12%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
W + +H L + + + + + ++ L ++ ++ +
Sbjct: 132 WTLNRLGIFHRLPDWLHSLVAGATLIAFYLLF-------VMYNFLLNLVLYQIVPRRYHQ 184
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIISGGDP 123
+ +++LG G + S +RI + K + +I+SGG
Sbjct: 185 --DYLIVLGAGLIEGKKV-------SRLLGARIDRAIAFSNKQYDKGHKRPKLIMSGGQG 235
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVS 180
+ L+E+ + ++ G + + I LE +S +T+QN +S + N G +
Sbjct: 236 KDEDLSEAAAMKDYAVKHGYDPNLILLEDKSTNTYQNMLYSKKVAVNDWGNSNFKAKFFT 295
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHL R+ LY + + + + ++L ++E+ G+ I + +
Sbjct: 296 NNYHLFRAGLYAKMAHLKANGIGA-----------TTRFYFLPNATIREFAGVFIMHKK 343
>gi|254428687|ref|ZP_05042394.1| conserved hypothetical protein [Alcanivorax sp. DG881]
gi|196194856|gb|EDX89815.1| conserved hypothetical protein [Alcanivorax sp. DG881]
Length = 204
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 77/193 (39%), Gaps = 15/193 (7%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
S+ PL +V+LG G R + + R+ L H
Sbjct: 21 RSFLPPLPRRITGITPQAVVVLGAGRRQRNG----RFSLTTRGLRRLKLAAELA-----H 71
Query: 111 SMHCTIIISGGDPQ----KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS 166
+++SGG Q + +E+ + + L ++ E +S +T++NA FSS
Sbjct: 72 EHGLPLLVSGGISQTPMHDNEPSEADLMAEQALRRW-PTLNVIKEARSRNTWENACFSSE 130
Query: 167 MIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
++ ++L+S HL R+ L FQ G+ +A+ S L +P + +
Sbjct: 131 LLAERGMDEVMLISDRAHLPRALLCFQSQGVLAQAAWSKRL-PKQEWVPSAGALSMVPEI 189
Query: 227 LKEYIGILIAYYR 239
E++ ++ + R
Sbjct: 190 WYEWLALVWYHVR 202
>gi|90421278|ref|ZP_01229163.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90334463|gb|EAS48266.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 211
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 13/164 (7%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++ N I++LG E + + R+ M L + + ++ SGG
Sbjct: 53 RRARNGIIVLGGAFDTRVARTRGMNELN-DAADRVTAGMELAQRYPK----AKLLFSGGV 107
Query: 123 PQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ + E+ G+ D + L+ ++ DTF+NA F+ + + G+ +LV+
Sbjct: 108 AALLEEDIPETEAAEALYRGLGLAPDRLLLDGRARDTFENAVFAKELAQPKPGEVWVLVT 167
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
SA H+ R+ F+ G + DY P +
Sbjct: 168 SASHMPRAVGCFRVAGFDIVPYPVDYRT------PSGPALWRPS 205
>gi|312870586|ref|ZP_07730701.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
gi|311093901|gb|EFQ52230.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
Length = 280
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 52/243 (21%), Positives = 96/243 (39%), Gaps = 32/243 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M L+ + + W L + K+ LL +++ L R P
Sbjct: 47 MSLNMLVCLPGLWSLPLARLPKLG--QQLWLLVITTDSLATAGLIMMGLSVLLLRVWPHP 104
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG G T P + +R+ R +K + +I+SG
Sbjct: 105 RAT---DYLVVLGAGLTKGQVPPVL--------AARLDSAYRFWKVHPET----VVIVSG 149
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM----QGKNI 176
GD + ++ + L GV I LE+Q+ +T+QN S +I +
Sbjct: 150 GDVHGDQVTQARAMADYLQRLGVVATKILLESQARNTWQNLVNSRKLIAQHWHREGKPRV 209
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+V+S++H+ R+ LY G+N +L+A L N +++Y+GI+
Sbjct: 210 TVVTSSFHVPRAMLYTHRLGLNW-----HFLSAPTPWPYLPLNL------VRDYLGIIRD 258
Query: 237 YYR 239
+ R
Sbjct: 259 HRR 261
>gi|229172971|ref|ZP_04300523.1| hypothetical protein bcere0006_20790 [Bacillus cereus MM3]
gi|228610491|gb|EEK67761.1| hypothetical protein bcere0006_20790 [Bacillus cereus MM3]
Length = 201
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 54 YVLILGA--------KLFGDRPSLSLQNRLDVALE----YLVSHPEAKVIVSGGQGEDED 101
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 102 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDL---YDVKHAVVVSNTYHLYR 158
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + + Y ++EY I+
Sbjct: 159 TKIIAKRLGMKMEALAA------ETPMRSKKKMY-----VREYAAIM 194
>gi|325677631|ref|ZP_08157283.1| hypothetical protein CUS_6193 [Ruminococcus albus 8]
gi|324110599|gb|EGC04763.1| hypothetical protein CUS_6193 [Ruminococcus albus 8]
Length = 252
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 45/246 (18%), Positives = 93/246 (37%), Gaps = 32/246 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMS----CFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
+L + + + + + C+ I K++ + F+ G I +L Y+
Sbjct: 34 VLCALLIAVTAKFGSFCRLISKLWGKVPTRVLVITAAVFLAAGFIYAGILSF--KMYRAQ 91
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P D +IV+LG PS R+ + +
Sbjct: 92 ENVPD---DTELIVVLGC--------QVKGTRPSRMLRRRLDVALE----AMEKHPDAVC 136
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKN 175
++SGG ++E+ ++ L+ G + I +E +S TF+N +F+ M + G++
Sbjct: 137 VVSGGQGYGEKISEAKAMHDYLISKGADESRILMEDKSTSTFENIKFTFEMTDKLGYGRD 196
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I +V+ +H R+ L + G + S + YL ++E++G+
Sbjct: 197 ITIVTDGFHQYRASLIAKQEGAGRITAYSAHTEPR----------YLLTFWVREWLGLTY 246
Query: 236 AYYRGN 241
+ G
Sbjct: 247 FWIFGK 252
>gi|313622511|gb|EFR92931.1| conserved hypothetical protein [Listeria innocua FSL J1-023]
Length = 189
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 79/216 (36%), Gaps = 35/216 (16%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K FF+ ++ F ++ I+ + + ++ N +++LG P
Sbjct: 5 KKFFVILIVIGFIYV--LIVAAFMFSG---------TRAKPDENVNTVLILGAKINGDPA 53
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
PS R+ + + +I+SGG E+ V L+
Sbjct: 54 ------SPSLVLQERLDAAV----AYLNEYPKTKVIVSGGQGADETTTEAAVMEEYLVNE 103
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ ++ I+ ET+S T +N ++S+ ++V+S YH+ R+ + + GI+
Sbjct: 104 GIAKNRIEKETKSKRTEENIKYSNE---KFDLGKTVIVTSDYHMYRALMLAKRQGIDATG 160
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ ++E + I A+
Sbjct: 161 LPAKSRTPAKYKG-----------MMREVLSITYAW 185
>gi|323467478|gb|ADX71165.1| Integral membrane protein [Lactobacillus helveticus H10]
Length = 374
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 94/243 (38%), Gaps = 34/243 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS-YQRPLLS 59
++LS +FL L + + + + ++ + ++ L+ L + Y R
Sbjct: 130 LILSLMFL-FGPGQYLPRWLSVLLASIPAIAIYLGL---VLYNFLINLLLYQIYPR---- 181
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIII 118
+ + +++LG G + S +RI ++ + ++ III
Sbjct: 182 ---RYKQDYLIVLGAGLINGDRV-------SKLLAARINRAIQYSNRQYQKGRKRPIIII 231
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---N 175
SGG + E++ + G++ + + +E +S +T+QN FS + G
Sbjct: 232 SGGQGPDEKIPEAVAMAKFARKRGIKTNHLLIEDKSKNTYQNMLFSKRLATKDFGSSNFR 291
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 292 STFFSNNYHIFRAALLAKEVGLKANGVGA-----------FTRLYYLPNAIIREFAGVFV 340
Query: 236 AYY 238
+
Sbjct: 341 MHK 343
>gi|260665181|ref|ZP_05866030.1| integral membrane protein [Lactobacillus jensenii SJ-7A-US]
gi|260560918|gb|EEX26893.1| integral membrane protein [Lactobacillus jensenii SJ-7A-US]
Length = 363
Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 97/243 (39%), Gaps = 31/243 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ W++ ++W L + I ++ + + I ++L + +
Sbjct: 124 LIGLWLYQKFTHWLHLPPYLAPILGLAPTIATYLII-------VMLSFIINVFLYQFYPK 176
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH-CTIIIS 119
++ + N +++LG G + S +RI ++ K K+ + + II+S
Sbjct: 177 KYCE--NYLIVLGAGLIN-------GTKVSTLLANRINASINYAKKVKKKTGNWPKIIMS 227
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNI 176
GG L+E+ +++G+ R+ I LE QS T +N FS +I+ +
Sbjct: 228 GGQGPDEELSEAAAMAEYAIKAGIPREIIILENQSTTTLENMTFSKKIIEKDTKTKPYTC 287
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
S+ YH+ R+ + + ++ + + +YL L+E+ I +
Sbjct: 288 KFFSNNYHIFRAAILAKKANLSANGVGAP-----------TRLYYLPNALLREFAAIFVL 336
Query: 237 YYR 239
+
Sbjct: 337 NKK 339
>gi|126650479|ref|ZP_01722702.1| hypothetical protein BB14905_07813 [Bacillus sp. B14905]
gi|126592635|gb|EAZ86634.1| hypothetical protein BB14905_07813 [Bacillus sp. B14905]
Length = 191
Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 42/224 (18%), Positives = 82/224 (36%), Gaps = 35/224 (15%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + ++ + F+ + +I G K ++ + N +++LG
Sbjct: 2 KKWLIRVGVVLIFIAIVLYIWLG-------KEIERGVEANA-----DGSANYMIILGA-- 47
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS SR+ E + +I+SGG ES V +
Sbjct: 48 -----KVKPGGVPSLSLKSRLEEAV----PYLVKYPQVKVIVSGGQGPDEDRTESSVMRD 98
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L ++G++ I E QS T++N FS +I + K I +VS+ +HLKR++ +
Sbjct: 99 YLEQNGIDATRIIEEDQSTSTYENLVFSKELI-PKETKKITIVSNDFHLKRAKYLAESLD 157
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ + + + ++E +L Y G
Sbjct: 158 FEVDVVSAKTPKSVEAKLK-----------IRERAALLKTYIVG 190
>gi|315126918|ref|YP_004068921.1| enzyme [Pseudoalteromonas sp. SM9913]
gi|315015432|gb|ADT68770.1| enzyme [Pseudoalteromonas sp. SM9913]
Length = 258
Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 21/233 (9%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW---KKDGNIIVL 71
+ RK+ M L + + I T L+ +L +P + + IV+
Sbjct: 31 IFALKQRKVAIAISLMSLATLL---IASTPLVANLLIKNSQPTSLAFNYLKHPNIDKIVV 87
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG P + A + + +R+ E MRL H +I+SGG + S
Sbjct: 88 LGCDINPNPALSANS-QLGNCALTRLVEGMRLANIY----PHAQLIVSGG--GYEKVTNS 140
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ + G+ ++ I ++DT Q A+ +S + + + LV+S H+ R++
Sbjct: 141 ALMYKTAISLGINKNRIVQNPNAMDTAQEAKLLASKLVDY---KVALVTSVSHMPRAKNL 197
Query: 192 FQHFGINTKASCSDYLN----AYYS-IIPLSANFYLTELALKEYIGILIAYYR 239
F GIN + +DY N +Y +IP + + E IG R
Sbjct: 198 FNAQGINVIPASTDYHNFAAFPWYKQLIPNAKALLVVTQYAHEVIGNAWINVR 250
>gi|171059762|ref|YP_001792111.1| hypothetical protein Lcho_3086 [Leptothrix cholodnii SP-6]
gi|170777207|gb|ACB35346.1| protein of unknown function DUF218 [Leptothrix cholodnii SP-6]
Length = 255
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 87/222 (39%), Gaps = 12/222 (5%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY-QRPLLSPQWKKDGNIIVLLGNGT 76
+ + +L++ + LL+ L+ + L ++L G
Sbjct: 33 RRSTGAGLWAGMLLVYLAFATPLGGNALLRPLEDRAREAAALCLADGPPPTTAIVLAGGV 92
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ P + S R ++ +++SGG + E+++
Sbjct: 93 DAGASQPGDYQFLTEGSLRRTVAAAHWARADDTR----RLLVSGGHGS---IPEAVLMTR 145
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L + G++ I++++ S +T Q+ + ++ + +Q + +++SA H+ R+ Q G
Sbjct: 146 MLADLGIDSRRIRIDSASTNTAQSGRNIAAQLGPVQAGRVGVITSADHMPRALRELQSQG 205
Query: 197 INTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGIL 234
I T A DY + ++P + AL EYIG+L
Sbjct: 206 IATCAMPMDYRHVAPILPGHLVPQLTALGKSTRALHEYIGLL 247
>gi|253583190|ref|ZP_04860388.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251833762|gb|EES62325.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 254
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 41/229 (17%), Positives = 88/229 (38%), Gaps = 38/229 (16%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
++ L + + ++ F+L F F+ I+ IL+ +++
Sbjct: 62 FFKFLKKICKLGYY--FFILTFIFVEVIILKDILVNR------------NKDPKVKCLIV 107
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG G PS R+ + + YK + + I+SGG + ++E+
Sbjct: 108 LGAGLKGD--------VPSEVLKYRLDKAVEYYKE----NPNTIFIVSGGQGKDELISEA 155
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQL 190
L + + +I E +S T++N +FS +IK +I ++S+++H+ R ++
Sbjct: 156 EAMEIYLSKRDIPIKNIIKEDKSTSTYENLKFSDEIIKQKGITGDIAVMSNSFHMYRVKI 215
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ K ++ + L+EY +L Y +
Sbjct: 216 ISEKLNFPLKTVYAE-----------TPAIVFPNYMLREYFALLNEYRK 253
>gi|161508196|ref|YP_001578167.1| hypothetical protein lhv_2072 [Lactobacillus helveticus DPC 4571]
gi|160349185|gb|ABX27859.1| hypothetical protein lhv_2072 [Lactobacillus helveticus DPC 4571]
Length = 367
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 93/242 (38%), Gaps = 25/242 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ ++ LI+S L ++S + I + +L L +
Sbjct: 116 LIFGFVALILSLMFLFGSGQYLPRWLSVLLASIPAIAI-YLGLVLYNFLINLLLYQIYPR 174
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIIS 119
++K+ + +++LG G + S +RI ++ + ++ II+S
Sbjct: 175 RYKQ--DYLIVLGAGLINGDRV-------SKLLAARINRAIQYSNRQYQKGRKRPIIIMS 225
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NI 176
GG + E++ + G++ + + +E +S +T+QN FS + G
Sbjct: 226 GGQGPDEKIPEAVAMAKFARKRGIKTNHLLIEDKSKNTYQNMLFSKRLATKDFGSSNFRS 285
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 286 TFFSNNYHIFRAALLAKEVGLKANGVGA-----------FTRLYYLPNAIIREFAGVFVM 334
Query: 237 YY 238
+
Sbjct: 335 HK 336
>gi|227889206|ref|ZP_04007011.1| integral membrane protein [Lactobacillus johnsonii ATCC 33200]
gi|227850435|gb|EEJ60521.1| integral membrane protein [Lactobacillus johnsonii ATCC 33200]
Length = 373
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 93/239 (38%), Gaps = 31/239 (12%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
W + +H L + + + + + ++ LL + + ++P+ +
Sbjct: 132 WTLNRLGVFHRLPDWLHSLVAGATLIAFYLLF---VMYNFLLNLVLYQ-----ITPR-RY 182
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIISGGDP 123
+ +++LG G + S +RI + K + +I+SGG
Sbjct: 183 KQDYLIVLGAGLIDGKKV-------SRLLGARIDRAIAFSNKQYDKGHKRPKLIMSGGQG 235
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVS 180
+ L+E+ + ++ G + + I LE +S +T+QN +S + + G +
Sbjct: 236 KDEDLSEAAAMKDYAVKHGYDSNLILLEDKSTNTYQNMLYSKKVAISDWGNSKFKAKFFT 295
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHL R+ LY + + + + ++L ++E+ G+ I + +
Sbjct: 296 NNYHLFRAGLYAKMAHLKANGVGA-----------TTRFYFLPNATIREFAGVFIMHKK 343
>gi|238855462|ref|ZP_04645772.1| integral membrane protein [Lactobacillus jensenii 269-3]
gi|282932170|ref|ZP_06337620.1| putative membrane protein [Lactobacillus jensenii 208-1]
gi|238831952|gb|EEQ24279.1| integral membrane protein [Lactobacillus jensenii 269-3]
gi|281303710|gb|EFA95862.1| putative membrane protein [Lactobacillus jensenii 208-1]
Length = 363
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 97/243 (39%), Gaps = 31/243 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ W++ ++W L + I ++ + + I ++L + +
Sbjct: 124 LIGLWLYQKFTHWLHLPPYLAPILGLAPTIATYLII-------VMLSFIINVFLYQFYPK 176
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH-CTIIIS 119
++ + N +++LG G + S +RI ++ K K+ + + II+S
Sbjct: 177 KYCE--NYLIVLGAGLIN-------GTKVSTLLANRINASINYAKKVKKKTGNWPKIIMS 227
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNI 176
GG L+E+ +++G+ R+ I LE QS T +N FS +I+ +
Sbjct: 228 GGQGPDEELSEAAAMAEYAIKAGIPREIIILENQSTTTLENMTFSKKIIEKDTKTKPYTC 287
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
S+ YH+ R+ + + ++ + + +YL L+E+ I +
Sbjct: 288 KFFSNNYHIFRAAILAKKANLSANGVGAP-----------TRLYYLPNALLREFAAIFVL 336
Query: 237 YYR 239
+
Sbjct: 337 NKK 339
>gi|116511272|ref|YP_808488.1| hypothetical protein LACR_0463 [Lactococcus lactis subsp. cremoris
SK11]
gi|116106926|gb|ABJ72066.1| hypothetical protein LACR_0463 [Lactococcus lactis subsp. cremoris
SK11]
Length = 178
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 62/180 (34%), Gaps = 23/180 (12%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+D + I++LG+ RI Q E + + II+SG
Sbjct: 20 DKARDIDTILVLGS-----------RINADEQPAKITQERLDAALLLAAKNPQAKIIVSG 68
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++E+ L+ + D I E ++ DT +N +S ++V+
Sbjct: 69 AKGADEPVSEAFSMKKYLMAHAISADRIISENKATDTAENLSYSKKYFHG----KTVVVT 124
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +HL R+ G+ + + + Y E +G++ A+ G
Sbjct: 125 NDFHLYRALYLASRQGLKVEGYAAKTEV--------TNPLYYPNYYGHEVLGLIYAFVFG 176
>gi|121604040|ref|YP_981369.1| hypothetical protein Pnap_1132 [Polaromonas naphthalenivorans CJ2]
gi|120593009|gb|ABM36448.1| protein of unknown function DUF218 [Polaromonas naphthalenivorans
CJ2]
Length = 259
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 73/205 (35%), Gaps = 14/205 (6%)
Query: 42 PTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
L +H + IV+LG G +P+ + SR+ +
Sbjct: 58 AVWLARHALPQVAPASSAQLKAGQVQAIVILGGGLLPGAPEYGGAPQPTPDTASRLRYGV 117
Query: 102 RLYKSCKQHSMHCTIIISGGDPQK----HGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
L + + +GG +E+ V L+ E+ S DT
Sbjct: 118 WLARQ-----TGLPVAFTGGTGWAADGMQTASEAEVAAQVALQDYGFTLR-WSESASRDT 171
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS----I 213
NA+ + +++ + I LV+ ++H+ R+ F+ G++ + + +
Sbjct: 172 SGNARLLAPLLQRDGVQRIALVTHSWHMPRALAAFERAGLSVTPAPMGFTEPIENHLLQW 231
Query: 214 IPLSANFYLTELALKEYIGILIAYY 238
+P + + L L+E +G+ +
Sbjct: 232 LPSAQGLQASRLVLRECLGLAVGRL 256
>gi|304392434|ref|ZP_07374375.1| periplasmic protein [Ahrensia sp. R2A130]
gi|303295538|gb|EFL89897.1| periplasmic protein [Ahrensia sp. R2A130]
Length = 189
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K IV+LG R P+ + +R + L++ + +++SGG
Sbjct: 4 KSAYAIVVLGAAVWKD-----GRASPALERRTR--HAIALHQQ----GLAPILVLSGGLG 52
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ H E+ + GV + + LE +S +TF+N FS+++++ + ++++VS AY
Sbjct: 53 R-HPPTEAKAMAEICMGEGVPQAALLLEGRSTNTFENVAFSAALLREKRVNSVLVVSDAY 111
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
HL R+++ F++ G S + P + + L+E + I
Sbjct: 112 HLPRAKMCFRYLGFIATGSAA-------VAGPTTPWYRTARYWLREIVAIPYYRL 159
>gi|259503279|ref|ZP_05746181.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
gi|259168734|gb|EEW53229.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
Length = 278
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 92/242 (38%), Gaps = 30/242 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L LI L Q + + LL + +L+ L L P
Sbjct: 46 ILQGLNLLICLPGLLGSQPENRAGMIWQLWLLTTVTAGLATVGLLIFSLAVGLLSWRLHP 105
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ +++LG G P + +R+ + ++ TI++SG
Sbjct: 106 H---HADYLIVLGAGLAQGKVPPVL--------AARLTRAAQFWQ----RQPTVTIVVSG 150
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM----QGKNI 176
G + E+ LLE G+ + + E+Q+ +T+QN +S +I +
Sbjct: 151 GRVHGDQVTEAAAMAAFLLECGLPPEKLLQESQARNTWQNLAYSQRLITQHWSGTGQPRV 210
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++V+S++H+ R+ +Y + G + + + YL +++Y+GIL
Sbjct: 211 VVVTSSFHVPRAWIYSRQLGQRYQFLPAP-----------TPWHYLPLALVRDYLGILRD 259
Query: 237 YY 238
+
Sbjct: 260 HR 261
>gi|2196513|gb|AAB61159.1| putative membrane protein [Staphylococcus epidermidis]
Length = 330
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 23 IFFMSCFMLLFS-FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
IF +S F FS FI I+ Y R + + I++LG+G
Sbjct: 127 IFIVSLFTYFFSLFISCFILSLF--------YSR----RKIDMSISYIIVLGSGLIEDKV 174
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
P ++ SRI + S K H ++SGG + ++ES L+
Sbjct: 175 PPLLQ--------SRIDIGKNFWDSKKDK--HTKFLLSGGQGKDERISESQAMKKYLIAQ 224
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + I E +S T++N +FS S+I II+ S+ YH+ R+ + +
Sbjct: 225 GVNENRIICENKSQSTYENLKFSKSLISKN--ATIIICSNNYHILRAVFIAKKLKYSH-- 280
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+YS+ + N++ T ++E + IL +
Sbjct: 281 --------FYSLGSKTKNYFFTNAFIRELVAILKMDW 309
>gi|237733730|ref|ZP_04564211.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|229383068|gb|EEO33159.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 255
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 73/176 (41%), Gaps = 25/176 (14%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ K + +++LG P +R R+ + ++ II+SG
Sbjct: 97 KYNKRSDFLIVLGARLYGDKPAPLLRY--------RLDAAVEYHQKF----PDVPIIVSG 144
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IIL 178
G + E+ + L+ G++ I E +S +T +N +S +I+ ++ +++
Sbjct: 145 GQGHGENITEAKAMKDYLINKGIDESLIIEENKSTNTNENIIYSKKIIETSTTEDYEVVI 204
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ +H RS+L G+ + + + ++Y L+E+ G L
Sbjct: 205 ITNGFHCYRSKLLANKHGLEAHTYAA------RENLDTAPHYY-----LREFFGCL 249
>gi|229155866|ref|ZP_04283967.1| hypothetical protein bcere0010_20560 [Bacillus cereus ATCC 4342]
gi|228627473|gb|EEK84199.1| hypothetical protein bcere0010_20560 [Bacillus cereus ATCC 4342]
Length = 166
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 19 YVLILGAKLFGDK--------PSLSLQNRLDVALE----YLYSHPEAKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 67 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENVKFSIDL---YDVKHAVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + I Y ++EY+ I+
Sbjct: 124 TKIIAKRLGMKMEALAA------ETPIRSKRKMY-----VREYVAIM 159
>gi|300869552|ref|ZP_07114133.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300332420|emb|CBN59331.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 351
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 57/255 (22%), Positives = 101/255 (39%), Gaps = 22/255 (8%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFF--MSCFMLLFSFIGWGIIPTILLKHLQFSY-QRPLLS 59
L+ + LI + ++ +R + +LL ++ L + + Q +
Sbjct: 99 LAVLLLIFATTGIVSGGVRNPAPKRIISALLLLIVASNPLVALSLAEQAEREAIQLVQIE 158
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ IVL+G GTT P IP + RI RLY+ H + +I+S
Sbjct: 159 TCCQNKVGAIVLVGQGTT-EPKIPYRTQIQLTDAGDRIAYAARLYR----HGLAPYLIVS 213
Query: 120 -GGDPQKHG-LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNI 176
G P G + E+ L++ GV +DI LET+S + ++A + ++ N G I
Sbjct: 214 AGYRPDLEGHVLEAADVKRLLVKMGVLPEDIILETKSKNLHESAIQTRIILNNKGLGDRI 273
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY-----------SIIPLSANFYLTEL 225
ILV+SA + R+ F + + +D+ P + +T
Sbjct: 274 ILVTSAIQMGRATRTFIKEKMRVSPAPTDFYTFELNAKPRRRLMVVDFFPSAQALSITTR 333
Query: 226 ALKEYIGILIAYYRG 240
++E L + RG
Sbjct: 334 IIQEDFAYLYYFVRG 348
>gi|148652828|ref|YP_001279921.1| hypothetical protein PsycPRwf_1021 [Psychrobacter sp. PRwf-1]
gi|148571912|gb|ABQ93971.1| protein of unknown function DUF218 [Psychrobacter sp. PRwf-1]
Length = 267
Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 53/253 (20%), Positives = 86/253 (33%), Gaps = 46/253 (18%)
Query: 2 LLSWIFLI-VSYWHLLCQSI---------RKIFFMSCFMLLFSFIGWGIIPTILLKHLQF 51
+L IF+I +WH + + K+ + + L SFI + +K +
Sbjct: 45 VLGLIFIIHAVFWHKIKAKLQVSKHWRMVWKLLWAIFVLWLISFIVFAFSLHKNIKQVDQ 104
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
Y+ I++LG G P+ SR+ L K
Sbjct: 105 PYET----------VAAIIVLGGGIQD--------GLPTPTLASRLDAAAPLIKEQ---- 142
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+I SGG +E L G+ + I+ E S T +N FS ++
Sbjct: 143 PQAVVITSGGIGMGEIRSEGEAMARYLYALYGIPLEHIQQEKNSTSTEENFLFSQQILTE 202
Query: 171 MQG---KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
I +V+S +H+ RS +H G L A S PLS +
Sbjct: 203 QGISLNDPIAVVTSDFHIPRSLAIAEHQGYTN-------LVALASTTPLSIRY---NSWF 252
Query: 228 KEYIGILIAYYRG 240
+EY + + G
Sbjct: 253 REYFAYISGWLLG 265
>gi|212715681|ref|ZP_03323809.1| hypothetical protein BIFCAT_00581 [Bifidobacterium catenulatum DSM
16992]
gi|212661048|gb|EEB21623.1| hypothetical protein BIFCAT_00581 [Bifidobacterium catenulatum DSM
16992]
Length = 255
Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 79/204 (38%), Gaps = 26/204 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ L+ +W +L + +R I + L +F G + + ++ + Q
Sbjct: 55 ILGFGLLFRWWTILPRLVRGILIAVACIGLVAF---GTVESCIVS---------KMHAQG 102
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K D + +V+LG + PS R+ + + + + I+SGG
Sbjct: 103 KPDLDYVVVLGA--------QVRKSGPSLVLRYRLDKAIE----YLDENPNTICIVSGGK 150
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
E+ + L E G+ I E+ S T +N S MI + +I ++++
Sbjct: 151 GPNEPFPEAQGMADYLKEHGIAEQRILEESDSKTTEENIVNSKKMINDDN-ASIGVITNN 209
Query: 183 YHLKRSQLYFQHFGI-NTKASCSD 205
+H+ R+ +G+ N + +
Sbjct: 210 FHMFRALQIADKYGLDNAQGIAAG 233
>gi|148544180|ref|YP_001271550.1| hypothetical protein Lreu_0951 [Lactobacillus reuteri DSM 20016]
gi|184153552|ref|YP_001841893.1| hypothetical protein LAR_0897 [Lactobacillus reuteri JCM 1112]
gi|227364609|ref|ZP_03848669.1| conserved hypothetical protein [Lactobacillus reuteri MM2-3]
gi|325682276|ref|ZP_08161793.1| hypothetical protein HMPREF0536_10714 [Lactobacillus reuteri
MM4-1A]
gi|148531214|gb|ABQ83213.1| protein of unknown function DUF218 [Lactobacillus reuteri DSM
20016]
gi|183224896|dbj|BAG25413.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
gi|227070353|gb|EEI08716.1| conserved hypothetical protein [Lactobacillus reuteri MM2-3]
gi|324978115|gb|EGC15065.1| hypothetical protein HMPREF0536_10714 [Lactobacillus reuteri
MM4-1A]
Length = 271
Score = 114 bits (287), Expect = 8e-24, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 25/168 (14%)
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG P + +R+ + + +C + II+SGG QK +E
Sbjct: 111 VLGAAVKHGQVPPVL--------ATRLDKAI----NCWKTHQSAKIIVSGGIVQKAKESE 158
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ V L+ G+ I ETQ+L+T+QN F+ +IK + I++V+S +H+ R++
Sbjct: 159 AEVMAAYLIAHGIPARKIICETQALNTWQNLTFARQLIKPQ--ETIVVVTSDFHVLRARA 216
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
Y + G+N + I + Y +++Y+GI+ ++
Sbjct: 217 YARKMGLN-----------WSFISSKTPWRYCPLTFIRDYLGIIRDHW 253
>gi|228914883|ref|ZP_04078488.1| hypothetical protein bthur0012_21100 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228844679|gb|EEM89725.1| hypothetical protein bthur0012_21100 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 166
Score = 114 bits (287), Expect = 8e-24, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 19 YVLILGAKLFGDK--------PSLSLQNRLDVALE----YLYSHPDVKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 67 IPEAHSMRNYLMARGIDESRILIEDQSTNTYENVKFSMDL---YDVKHAVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + + Y ++EY I+
Sbjct: 124 TKIIAKRLGMKMEALAA------ETPMRSKRKMY-----VREYAAIM 159
>gi|86140156|ref|ZP_01058718.1| hypothetical protein MED193_11777 [Roseobacter sp. MED193]
gi|85823093|gb|EAQ43306.1| hypothetical protein MED193_11777 [Roseobacter sp. MED193]
Length = 164
Score = 114 bits (287), Expect = 8e-24, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG P R PS R + +L++ + +I GG Q H +
Sbjct: 5 VVLGA-----AVWPGGR--PSPTLRRRCLQAAKLFRRGRVSH----VICCGGLGQ-HPPS 52
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E+ V E+GV I LE QS T +N +++ + NI+LV+ YH R+
Sbjct: 53 EAEVMRQICREAGVPDSAILLEDQSRTTLENLANIRALLARLDQPNIVLVTDRYHKWRAL 112
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +HFG +ASC ++ F + + L+E ++ ++R
Sbjct: 113 MVARHFGFQAQASC--------PPPSDTSRFRVLKSWLREAPALIYYWWR 154
>gi|297626919|ref|YP_003688682.1| hypothetical protein PFREUD_17520 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296922684|emb|CBL57261.1| Hypothetical protein PFREUD_17520 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 354
Score = 114 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 85/217 (39%), Gaps = 19/217 (8%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
++ L +FIG + +++ QF + + D +++++LG+G
Sbjct: 131 RWWSMALFTLVTFIGTYLGTFLVVMLAQFVVRALFGGRRRVPDPDVLIVLGSGLINGKVP 190
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
P + SR+ +++ ++SGG AE+ L G
Sbjct: 191 PLL--------ASRLDRALQVSAEEALQGRRPMFVVSGGRGSDEPRAEAEAMAEYLTSRG 242
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHFGINTKA 201
V + I +E +S T +N S+ +++ G ++ V+S+YH R+ +
Sbjct: 243 VPDERIIVEDRSRSTRENLVNSTRLLRERGIGGPMLAVTSSYHTTRTDVLAADL------ 296
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
L+ + +A +Y L+EYIG+L
Sbjct: 297 ----RLDDVFVTGAHTAWYYAPGAYLREYIGVLTYRL 329
>gi|299538217|ref|ZP_07051502.1| putative cytoplasmic protein [Lysinibacillus fusiformis ZC1]
gi|298726419|gb|EFI67009.1| putative cytoplasmic protein [Lysinibacillus fusiformis ZC1]
Length = 186
Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 69/181 (38%), Gaps = 23/181 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P+ + +++LG PS SR+ + H +I+S
Sbjct: 28 PKADGSADYMIILGA-------KVRPGGVPSLSLKSRLEVAV----PYLTKYPHVKVIVS 76
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG E+ V + L + G++ I +E QS T++N FS ++ + K I +V
Sbjct: 77 GGQGPDEDRTEASVMQDYLEQYGIDATRIIIEDQSTSTYENLVFSKDLL-PKETKKITIV 135
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S+ +HLKR++ + + + + + ++E +L Y
Sbjct: 136 SNDFHLKRAKYLAESLDFEVDVLSARTPKSVEAKLR-----------IRERAALLKTYIV 184
Query: 240 G 240
G
Sbjct: 185 G 185
>gi|325122581|gb|ADY82104.1| hypothetical protein BDGL_001518 [Acinetobacter calcoaceticus
PHEA-2]
Length = 374
Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 19/194 (9%)
Query: 50 QFSYQRPL-LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
++ ++PL + P+ + IV+LG G T+ I + + R+ +T+ + K
Sbjct: 191 EYVRKKPLPVQPKKLSEPYAIVVLGGGLTLDKN--GKDIVVNGYTRLRLEKTLEVEKQN- 247
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
H I++SG E+ L E GV+ LE +S++T +N +FSS ++
Sbjct: 248 ----HLPIVLSG--------VEAPYMQAWLKERGVDAK--LLEKRSMNTCENTRFSSLLL 293
Query: 169 KNMQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ G ++LV+ YH+ R++ F GI T + P N+ + A
Sbjct: 294 QKKGGAPTVMLVTDEYHMPRTRRLFALNGIETIPVVAPMPTPLTRWQPSGQNYDHSRRAN 353
Query: 228 KEYIGILIAYYRGN 241
E + + G+
Sbjct: 354 YELLATIRDMLFGS 367
>gi|217963458|ref|YP_002349136.1| hypothetical protein LMHCC_0160 [Listeria monocytogenes HCC23]
gi|217332728|gb|ACK38522.1| conserved hypothetical protein [Listeria monocytogenes HCC23]
gi|307571968|emb|CAR85147.1| conserved domain protein [Listeria monocytogenes L99]
Length = 189
Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 84/218 (38%), Gaps = 33/218 (15%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+R++ +S ++ FI I+ I+ + + + +++LG
Sbjct: 1 MRRLKRISIILIAIGFIYLLIVAAIMFSG---------TRAKPSDNADTVLILGAKVNGD 51
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P PA ++ R+ + + +++SGG + +E+ V L+
Sbjct: 52 PAEPAEVLK------ERLDAAVT----YLNENPTMQVVVSGGQGEDESASEASVMEEYLV 101
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
G+ R IK+E +S T +N ++S ++V+S YH+ R+ + + ++
Sbjct: 102 NKGITRSRIKIEDKSRRTEENIKYSKE---KFNLGKTVIVTSDYHMYRALMLAKRQELDA 158
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ S + + ++E + I A+
Sbjct: 159 SGLPA-----------KSQSVIKIKNMMRETLSITYAW 185
>gi|296118003|ref|ZP_06836585.1| putative integral membrane protein with DUF218 domain protein
[Corynebacterium ammoniagenes DSM 20306]
gi|295968889|gb|EFG82132.1| putative integral membrane protein with DUF218 domain protein
[Corynebacterium ammoniagenes DSM 20306]
Length = 359
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+++ + +++LG+G P + +R+ +++ + K H II SG
Sbjct: 175 RYRTEPEAVIVLGSGLINGEVPPLL--------AARLDKSLEVQKKFSNH---PVIITSG 223
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E + LL GVE + ET+S +T +N FS ++ + +++ +
Sbjct: 224 GQGSDEPRPEGEAMRDYLLSKGVEPARVVAETESRNTEENLHFSRKLLTD-PSDQVVVAT 282
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S+YH+ R+ L + G+ + +A +Y L+E++GI+
Sbjct: 283 SSYHVFRAALLTRTLGMRAHVVGA-----------RTAWYYFPSALLREFVGIIRDRL 329
>gi|295695151|ref|YP_003588389.1| protein of unknown function DUF218 [Bacillus tusciae DSM 2912]
gi|295410753|gb|ADG05245.1| protein of unknown function DUF218 [Bacillus tusciae DSM 2912]
Length = 188
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 15/165 (9%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++++LG + EP +R+ + LY+ I++SGG
Sbjct: 25 PPRPADVLLILGA--------KIMGREPGAALRARLEAGLDLYR----RGYAPRILVSGG 72
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ +E+ V + L GV + +E S DT +N FSS ++K + ++V+S
Sbjct: 73 QRRPGAPSEADVMADYLRVRGVPPRALIVEDLSSDTVENLLFSSRLMKIHGWRRAVVVTS 132
Query: 182 AYHLKRSQLYFQHFGINTK---ASCSDYLNAYYSIIPLSANFYLT 223
AYHL R+ + G++ + +D L + + F+ +
Sbjct: 133 AYHLPRALWLARLAGLDASGYAPASADVLGTWMYALREIPAFWRS 177
>gi|323359408|ref|YP_004225804.1| hypothetical protein MTES_2960 [Microbacterium testaceum StLB037]
gi|323275779|dbj|BAJ75924.1| uncharacterized conserved protein [Microbacterium testaceum
StLB037]
Length = 337
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-S 119
+ IV+LG+G P +R R+ + ++ + +++ S
Sbjct: 153 PAPRRPRAIVVLGSGLIRGEVPPLLR--------GRLDRAIAAWRRAVRAGGAAPVLVPS 204
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIIL 178
GG E L + G+ D I+ ET+SL+T +N +FS ++ + G +++
Sbjct: 205 GGQGPDEPRPEGEAMAEYLRDQGIPGDLIRPETRSLNTRENLEFSRVIVDGIDGGGPVLI 264
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
V+S YH+ R+ L + + + +A +++ L+EY+ +L
Sbjct: 265 VTSDYHMLRAGLLARRRIPRARVVGA-----------RTAAYFVPSAFLREYVALLA 310
>gi|229011547|ref|ZP_04168733.1| hypothetical protein bmyco0001_19960 [Bacillus mycoides DSM 2048]
gi|229059943|ref|ZP_04197317.1| hypothetical protein bcere0026_20500 [Bacillus cereus AH603]
gi|229133107|ref|ZP_04261943.1| hypothetical protein bcere0014_20300 [Bacillus cereus BDRD-ST196]
gi|228650316|gb|EEL06315.1| hypothetical protein bcere0014_20300 [Bacillus cereus BDRD-ST196]
gi|228719356|gb|EEL70960.1| hypothetical protein bcere0026_20500 [Bacillus cereus AH603]
gi|228749702|gb|EEL99541.1| hypothetical protein bmyco0001_19960 [Bacillus mycoides DSM 2048]
Length = 166
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + + + +I+SGG +
Sbjct: 19 YVLILGA--------KLFGDRPSLSLQNRLDIALEYLHAHPE----VKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ + I +E +S +T++N +FS + K+ ++VS+ YHL R
Sbjct: 67 IPEAHSMRNYLMVHGIDENRILIEDRSTNTYENLKFSMDL---YDVKHAVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + GI +A ++ + ++EY I+
Sbjct: 124 TKIIAKRLGIKMEALAAETPRRSKK-----------KAYVREYAAIM 159
>gi|163940067|ref|YP_001644951.1| hypothetical protein BcerKBAB4_2098 [Bacillus weihenstephanensis
KBAB4]
gi|163862264|gb|ABY43323.1| protein of unknown function DUF218 [Bacillus weihenstephanensis
KBAB4]
Length = 185
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + + + +I+SGG +
Sbjct: 38 YVLILGA--------KLFGDRPSLSLQNRLDIALEYLHAHPE----VKVIVSGGQGEDED 85
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ + I +E +S +T++N +FS + K+ ++VS+ YHL R
Sbjct: 86 IPEAHSMRNYLMVHGIDENRILIEDRSTNTYENLKFSMDL---YDVKHAVVVSNTYHLYR 142
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + GI +A ++ + ++EY I+
Sbjct: 143 TKIIAKRLGIKMEALAAETPRRSKK-----------KAYVREYAAIM 178
>gi|152975455|ref|YP_001374972.1| hypothetical protein Bcer98_1670 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152024207|gb|ABS21977.1| protein of unknown function DUF218 [Bacillus cytotoxicus NVH
391-98]
Length = 185
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 80/200 (40%), Gaps = 27/200 (13%)
Query: 36 IGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
I + +L L +YQ R + + + I++LG PS
Sbjct: 5 IVCLLFLLPILYILYITYQMRKVAQKEVSNEIPYILILGAKLFGDK--------PSQSLQ 56
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
+R+ + + I+SGG + + E+ N L+ G+ + I +E +S
Sbjct: 57 NRLDVAL----KYLNENPKTKAIVSGGQGEDEDIPEAHSMRNYLVAHGINANRILIEDRS 112
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
T++N +FS + + I+VS+ YHL R+++ + GI +A +
Sbjct: 113 TSTYENLKFSKDL---FHITHAIIVSNTYHLYRTKIIAKRLGIKMEALAA---------- 159
Query: 215 PLSANFYLTELALKEYIGIL 234
+ + ++EYI I+
Sbjct: 160 -STPARSKNKAYIREYIAII 178
>gi|325661886|ref|ZP_08150507.1| hypothetical protein HMPREF0490_01245 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471864|gb|EGC75081.1| hypothetical protein HMPREF0490_01245 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 241
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/235 (17%), Positives = 91/235 (38%), Gaps = 41/235 (17%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
FL+ + H + ++ I F+ F F +I + L K
Sbjct: 42 FLLAAIVHFSPRWLQYILLTLNFIAYFVFFAVQVIICSAMLTL------------PPKKL 89
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++I++LG +++ R+ + K + +++SGG +
Sbjct: 90 DVIIVLGAQVRGKKITNSLKR--------RLDRGIEYLKE----NPETRVVVSGGQGKGE 137
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ E+ L+ G+ + I LE +S +T++N ++S+ ++ +M I +VS+ +H+
Sbjct: 138 DVTEAFAMAQYLVSHGIAEEQISLEEKSRNTYENLKYSALLVDSMD-DRIGIVSNNFHIY 196
Query: 187 RSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
RS L + G + A+ + + ++E+ ++ Y
Sbjct: 197 RSLLLGRQIGYTRLYGIAAGCNPI-------------LFLNYMVREFFAVMRMYL 238
>gi|182414370|ref|YP_001819436.1| hypothetical protein Oter_2554 [Opitutus terrae PB90-1]
gi|177841584|gb|ACB75836.1| protein of unknown function DUF218 [Opitutus terrae PB90-1]
Length = 264
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 77/215 (35%), Gaps = 19/215 (8%)
Query: 37 GWGIIPTILLKHLQFSYQ------RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+ L++ L+ +Y P +V+LG G + PT+ A+ + S
Sbjct: 53 SNRAVSLWLIRPLETTYPAIPEFAPATALPPNLAGCQAVVVLGGGHSDSPTLSAV-NQLS 111
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
+ R+ E R+ ++ +I+ G + + + V GV I
Sbjct: 112 ESAQGRLLEAYRILRALP---PEARLIV-CGRGGPNRPSHASVLAQAATSLGVSPHRIVR 167
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA- 209
DT A ++ + LV+SA+HL R+ + G+ +++
Sbjct: 168 LDTPRDTEDEAAQLRELLG--RDTPFALVTSAWHLPRATALMRGAGLRPVPCPANFAGKP 225
Query: 210 -----YYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ ++ + A++E +G + + R
Sbjct: 226 GAPFEWLDLLCGLDGLDRSTKAIRERLGYVWSALR 260
>gi|229044023|ref|ZP_04191712.1| hypothetical protein bcere0027_20620 [Bacillus cereus AH676]
gi|228725304|gb|EEL76572.1| hypothetical protein bcere0027_20620 [Bacillus cereus AH676]
Length = 162
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 15 YVLILGA--------KLFGDRPSLSLQNRLDVAVE----YLFSHPEAKVIVSGGQGEDED 62
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 63 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDL---YNVKHAVVVSNTYHLYR 119
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + I Y ++EY I+
Sbjct: 120 TKIIAKRLGMKMEALAA------ETPIRSKRKMY-----VREYAAIM 155
>gi|268320221|ref|YP_003293877.1| hypothetical protein FI9785_1759 [Lactobacillus johnsonii FI9785]
gi|262398596|emb|CAX67610.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus
johnsonii FI9785]
Length = 373
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/239 (16%), Positives = 93/239 (38%), Gaps = 31/239 (12%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
W + +H L + + + + + ++ LL + + ++P+ +
Sbjct: 132 WTLNRLGVFHRLPDWLHSLVAGATLIAFYLLF---VMYNFLLNLVLYQ-----ITPR-RY 182
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIISGGDP 123
N +++LG G + S +RI + K + +I+SGG
Sbjct: 183 KQNYLIILGAGLIDGKKV-------SRLLGARIDRAIAFSNKQYDKGHKRPKLIMSGGQG 235
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVS 180
+ L+E+ + ++ G + + I LE +S +T+QN +S + + G +
Sbjct: 236 KDEDLSEAAAMKDYAVKHGYDPNLILLEDKSTNTYQNMLYSKKVAISDWGNSKFKAKFFT 295
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ YHL R+ LY + + + + ++L ++E+ G+ I + +
Sbjct: 296 NNYHLFRAGLYAKMAHLKANGVGA-----------TTRFYFLPNATIREFAGVFIMHKK 343
>gi|228900868|ref|ZP_04065083.1| hypothetical protein bthur0014_20700 [Bacillus thuringiensis IBL
4222]
gi|228858794|gb|EEN03239.1| hypothetical protein bthur0014_20700 [Bacillus thuringiensis IBL
4222]
Length = 166
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 19 YVLILGA--------KLFGDRPSLSLQNRLDVALE----YLFSHPEAKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 67 ISEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDL---YNVKHAVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + I Y ++EY I+
Sbjct: 124 TKIIAKRLGMKMEALAA------ETPIRSKRKMY-----VREYAAIM 159
>gi|332653075|ref|ZP_08418820.1| hypothetical protein HMPREF0866_00773 [Ruminococcaceae bacterium
D16]
gi|332518221|gb|EGJ47824.1| hypothetical protein HMPREF0866_00773 [Ruminococcaceae bacterium
D16]
Length = 205
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 44/231 (19%), Positives = 87/231 (37%), Gaps = 42/231 (18%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
Y + KI + F G + + G+ V
Sbjct: 3 GYRGKQPRRWLKILLALVLAGILCFAGL--------------FGAVMYGAYDHVSGDPQV 48
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
++ G ++P EPS R+ + T+++SGG +E
Sbjct: 49 MIILGCRVMPG-----GEPSILLQDRLDTAL----DYLDDHPDITVVVSGGQGSNEPTSE 99
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK----NIILVSSAYHLK 186
+ + L E GV+ D I LE +S +T +N +S +++ +++VS+ +HL
Sbjct: 100 AACMADYLEEHGVDPDQILLEDKSSNTKENLIYSRELLEEQGVDVGEGGVLVVSNGFHLT 159
Query: 187 RSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
RS++ + FG ++T A+ + + IP Y ++E + ++
Sbjct: 160 RSRMLAERFGYGHVSTLAAPTTH-------IPSRIQMY-----IREPLALV 198
>gi|309778681|ref|ZP_07673455.1| periplasmic protein [Ralstonia sp. 5_7_47FAA]
gi|308922531|gb|EFP68154.1| periplasmic protein [Ralstonia sp. 5_7_47FAA]
Length = 207
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 80/209 (38%), Gaps = 23/209 (11%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R I + L IG I+ ++ + + S+ P+ + ++LG
Sbjct: 12 RRAIVIGPLMLALLFAIGLFIVAWQIVSYGEQSFNAPV---------DAAIVLGAAVWGN 62
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI E + Y++ + ++ +GG P +E V +
Sbjct: 63 KPSPVYR--------ERINEAITRYQNKQVRY----LVFTGGTPGADYPSEGKVGREYAI 110
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ GV D I ET S T+QN + ++ + ++LVS HL+R+ G+
Sbjct: 111 KHGVPPDAILAETTSRTTWQNLVNAKKLLDPLGIHTVLLVSDPLHLRRATAMANDIGLQA 170
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALK 228
+ ++ + + ANF E+ L
Sbjct: 171 LPGPTS--SSRFESLSTRANFLWREIWLY 197
>gi|229190360|ref|ZP_04317361.1| hypothetical protein bcere0002_20280 [Bacillus cereus ATCC 10876]
gi|228593144|gb|EEK50962.1| hypothetical protein bcere0002_20280 [Bacillus cereus ATCC 10876]
Length = 185
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + II+SGG +
Sbjct: 38 YVLILGA--------KLFGDRPSLSLQNRLDVALE----YLFSHPEAKIIVSGGQGEDED 85
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 86 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDL---YNVKHAVVVSNTYHLYR 142
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + I Y ++EY I+
Sbjct: 143 TKIIAKRLGMKMEALAA------ETPIRSKRKMY-----VREYAAIM 178
>gi|229029997|ref|ZP_04186062.1| hypothetical protein bcere0028_20790 [Bacillus cereus AH1271]
gi|229079448|ref|ZP_04211988.1| hypothetical protein bcere0023_21020 [Bacillus cereus Rock4-2]
gi|228703818|gb|EEL56264.1| hypothetical protein bcere0023_21020 [Bacillus cereus Rock4-2]
gi|228731258|gb|EEL82175.1| hypothetical protein bcere0028_20790 [Bacillus cereus AH1271]
Length = 162
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 15 YVLILGA--------KLFGDRPSLSLQNRLDVALE----YLFSHPEAKVIVSGGQGEDED 62
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 63 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDL---YNVKHAVVVSNTYHLYR 119
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + I Y ++EY I+
Sbjct: 120 TKIIAKRLGMKMEALAA------ETPIRSKRKMY-----VREYAAIM 155
>gi|24378805|ref|NP_720760.1| hypothetical protein SMU.302 [Streptococcus mutans UA159]
gi|290581191|ref|YP_003485583.1| hypothetical protein SmuNN2025_1665 [Streptococcus mutans NN2025]
gi|24376679|gb|AAN58066.1|AE014879_3 conserved hypothetical protein; putative membrane protein
[Streptococcus mutans UA159]
gi|254998090|dbj|BAH88691.1| conserved hypothetical protein [Streptococcus mutans NN2025]
Length = 337
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 93/239 (38%), Gaps = 27/239 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M+ S+ +V H + F S + LL + + I Y L
Sbjct: 101 MITSFFLFMVIRIHHSTHLLFNRFIASLYALLSASFLIFSVAFIAFML----YSILYLII 156
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K + I++ G G + ++ P + RI + + ++ K +I SG
Sbjct: 157 PKNKHYDYIIIHGAGL-----LHGNQVTPLLKR--RIDKALEAFRQSKNS--QVKLIASG 207
Query: 121 GDPQKHGLAESIVYNNKLLES--GVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNII 177
G ++E+ N + + + D + LE QS T++N FS + K M+ +
Sbjct: 208 GLGSGETISEAAAIANYIRKQASDIPNDRLLLEEQSHSTYENLLFSKQLAEKEMKKPRFL 267
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
V++AYH+ R+ +Y + + +A +Y+ ++E+I I++
Sbjct: 268 FVTNAYHVFRTSVYARRLHMAGDGLGC-----------STAAYYIPSAFIREFIAIVVY 315
>gi|30020365|ref|NP_831996.1| putative cytoplasmic protein [Bacillus cereus ATCC 14579]
gi|229109718|ref|ZP_04239304.1| hypothetical protein bcere0018_19790 [Bacillus cereus Rock1-15]
gi|229127675|ref|ZP_04256664.1| hypothetical protein bcere0015_21240 [Bacillus cereus BDRD-Cer4]
gi|229144871|ref|ZP_04273268.1| hypothetical protein bcere0012_20310 [Bacillus cereus BDRD-ST24]
gi|296502841|ref|YP_003664541.1| hypothetical protein BMB171_C2008 [Bacillus thuringiensis BMB171]
gi|29895916|gb|AAP09197.1| hypothetical Cytosolic Protein [Bacillus cereus ATCC 14579]
gi|228638593|gb|EEK95026.1| hypothetical protein bcere0012_20310 [Bacillus cereus BDRD-ST24]
gi|228655752|gb|EEL11601.1| hypothetical protein bcere0015_21240 [Bacillus cereus BDRD-Cer4]
gi|228673759|gb|EEL29017.1| hypothetical protein bcere0018_19790 [Bacillus cereus Rock1-15]
gi|296323893|gb|ADH06821.1| putative cytoplasmic protein [Bacillus thuringiensis BMB171]
Length = 185
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 38 YVLILGA--------KLFGDRPSLSLQNRLDVAVE----YLFSHPEAKVIVSGGQGEDED 85
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 86 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDL---YNVKHAVVVSNTYHLYR 142
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + I Y ++EY I+
Sbjct: 143 TKIIAKRLGMKMEALAA------ETPIRSKRKMY-----VREYAAIM 178
>gi|262046176|ref|ZP_06019139.1| integral membrane protein [Lactobacillus crispatus MV-3A-US]
gi|260573506|gb|EEX30063.1| integral membrane protein [Lactobacillus crispatus MV-3A-US]
Length = 293
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/229 (16%), Positives = 86/229 (37%), Gaps = 28/229 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ + + L I ++ + + ++ +++ L
Sbjct: 68 IIFFLFLYPLVGRISHDSWLKYPYIFLWLVIIYLVTIMMMYTLTSWINLINWH---MPHL 124
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G P + +RI + +Y + +I+SGG
Sbjct: 125 DYIVVLGAGIMGTKVTPLL--------AARISRGIEIYH----KNPGSKLIMSGGQGPGE 172
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ E+ + G+ ++DI +E +S T QN QFS +++K +V+S+YH+
Sbjct: 173 DIPEAAAMAEYAEKLGINKNDIIIENKSKTTQQNLQFSHALMKPN--SRFCIVTSSYHVY 230
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
R+ + + G+ + + ++ ++E+I L+
Sbjct: 231 RALVLAKRQGLKCTGYGA-----------KTKWYFTLNAFVREFIAYLV 268
>gi|332534944|ref|ZP_08410763.1| hypothetical protein PH505_bx00130 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035617|gb|EGI72108.1| hypothetical protein PH505_bx00130 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 254
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 53/247 (21%), Positives = 93/247 (37%), Gaps = 21/247 (8%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL--- 57
M L L LL RK + F+ S I + T + +L P
Sbjct: 13 MPLPLFGLFACLMLLLAFKGRK---SALFLSTLSLIVLLALSTPFIANLIIQNNEPASLA 69
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ + IV+LG P + A + + +R+ E +RL K H + +I
Sbjct: 70 FNTLKHPKIDKIVVLGCDINPNPALSAN-NQLGNCALTRLVEGVRLAK----HYPNAELI 124
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGG + S + + GV + I +++DT + A+ +S + + +
Sbjct: 125 VSGG--GYKNITNSGLMYQTAISLGVNKSRIFQNPKAMDTGEEAKLLASKLVDF---KVA 179
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIG 232
LV+S H+ R++ F GI + +DY L IP + + E +G
Sbjct: 180 LVTSVLHMPRAKDLFNAQGIEVITAATDYHNFAALPWSKQFIPNAHALIVVTQYSHEVVG 239
Query: 233 ILIAYYR 239
+ R
Sbjct: 240 NIWISLR 246
>gi|299769642|ref|YP_003731668.1| hypothetical protein AOLE_07010 [Acinetobacter sp. DR1]
gi|298699730|gb|ADI90295.1| hypothetical protein AOLE_07010 [Acinetobacter sp. DR1]
Length = 373
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 19/197 (9%)
Query: 47 KHLQFSYQRPLLSPQWKKDGN-IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
+ +++ + PL +P K IV+LG G T+ I + + R+ +T+ + K
Sbjct: 187 QKIEYVRKNPLPAPAKKLSQPYAIVVLGGGLTLDKN--GKDIVVNGYTRLRLEKTLEVEK 244
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
+ I++SG E+ L E GV+ LE +S++T +N +FSS
Sbjct: 245 QNQ-----LPIVLSG--------VEAPYMQAWLKERGVDAK--LLEKRSMNTCENTRFSS 289
Query: 166 SMIKNMQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+++ G ++LV+ YH+ R++ F GI T + P N+ +
Sbjct: 290 LLLQKKGGAPTVMLVTDEYHMPRTRRLFALNGIETIPVVAPMPTPLTRWQPSVQNYDHSR 349
Query: 225 LALKEYIGILIAYYRGN 241
A E + + G+
Sbjct: 350 RANYELLATIRDMLFGS 366
>gi|229096776|ref|ZP_04227746.1| hypothetical protein bcere0020_20230 [Bacillus cereus Rock3-29]
gi|229115758|ref|ZP_04245160.1| hypothetical protein bcere0017_20490 [Bacillus cereus Rock1-3]
gi|228667641|gb|EEL23081.1| hypothetical protein bcere0017_20490 [Bacillus cereus Rock1-3]
gi|228686618|gb|EEL40526.1| hypothetical protein bcere0020_20230 [Bacillus cereus Rock3-29]
Length = 166
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 19 YVLILGA--------KLFGDRPSLSLQNRLDVALE----YLYSHPEVKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E +S +T++N +FS + K+ ++VS+ YHL R
Sbjct: 67 IPEAHSMRNYLMVHGIDESRILMEDRSTNTYENLKFSMDLFD---VKHAVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + GI +A + + + Y ++EY I+
Sbjct: 124 TKIIARRLGIKMEALAA------ETPMRSKRKMY-----VREYAAIM 159
>gi|224500115|ref|ZP_03668464.1| hypothetical protein LmonF1_10719 [Listeria monocytogenes Finland
1988]
Length = 189
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 71/177 (40%), Gaps = 24/177 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG P + PS R+ + + +I+SG
Sbjct: 33 KPSENADTVLILGAKVKGNPAV------PSLVLQERLDAAV----AYLNEYPKAKVIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V L+ G+ R I+ ET+S T +N ++S++ ++V+
Sbjct: 83 GQGADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S YH+ R+ + + GI+ + S F + ++E + I A+
Sbjct: 140 SDYHMYRALMLAKRQGIDASGLPA-----------TSQTFAKYKGMMREVLSITYAW 185
>gi|119962310|ref|YP_949744.1| hypothetical protein AAur_4076 [Arthrobacter aurescens TC1]
gi|119949169|gb|ABM08080.1| putative integral membrane protein with DUF218 domain [Arthrobacter
aurescens TC1]
Length = 336
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/234 (15%), Positives = 91/234 (38%), Gaps = 29/234 (12%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L ++ ++++ +L + L S++G + + Y +
Sbjct: 100 LAVFLAPVIAFLFVLSGQPVLAGIAALAFFLCSYLGCAFVVFL-------GYAVVYSKMR 152
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +++LG+G P + +R+ + + +Y ++ SGG
Sbjct: 153 FSPNPAAVIVLGSGLIDGKVPPLL--------AARLNKALEIYDGGTPAK--PVLVPSGG 202
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV-S 180
ES + L+ G D+ E Q+ T +N +S +++ + + +LV +
Sbjct: 203 QGPDEPRPESTAMKDYLVAKGAAAKDVLEENQATTTRENLAYSVALLADKGIQGPLLVCT 262
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ YH+ R+ L + IN + + +A +++ L+E++ ++
Sbjct: 263 NNYHVLRAALLSRRQKINAEVVGAP-----------TARYFVPSAFLREFVAVM 305
>gi|16804480|ref|NP_465965.1| hypothetical protein lmo2442 [Listeria monocytogenes EGD-e]
gi|47096829|ref|ZP_00234410.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|224503412|ref|ZP_03671719.1| hypothetical protein LmonFR_13022 [Listeria monocytogenes FSL
R2-561]
gi|254828017|ref|ZP_05232704.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|254831135|ref|ZP_05235790.1| hypothetical protein Lmon1_07233 [Listeria monocytogenes 10403S]
gi|254900420|ref|ZP_05260344.1| hypothetical protein LmonJ_11417 [Listeria monocytogenes J0161]
gi|254913341|ref|ZP_05263353.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937722|ref|ZP_05269419.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|255026377|ref|ZP_05298363.1| hypothetical protein LmonocytFSL_08615 [Listeria monocytogenes FSL
J2-003]
gi|255029934|ref|ZP_05301885.1| hypothetical protein LmonL_14269 [Listeria monocytogenes LO28]
gi|16411930|emb|CAD00520.1| lmo2442 [Listeria monocytogenes EGD-e]
gi|47014806|gb|EAL05758.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|258600401|gb|EEW13726.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|258610325|gb|EEW22933.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|293591346|gb|EFF99680.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 189
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 71/177 (40%), Gaps = 24/177 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG P + PS R+ + + +I+SG
Sbjct: 33 KPSENADTVLILGAKVKGNPAV------PSLVLQERLDAAV----AYLNEYPKAKVIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V L+ G+ R I+ ET+S T +N ++S++ ++V+
Sbjct: 83 GQGADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S YH+ R+ + + GI+ + S F + ++E + I A+
Sbjct: 140 SDYHMYRALMLAKRQGIDASGLPA-----------TSQTFAKYKGMMREVLSITYAW 185
>gi|228920990|ref|ZP_04084327.1| hypothetical protein bthur0011_20010 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228838684|gb|EEM83988.1| hypothetical protein bthur0011_20010 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 162
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 15 YVLILGA--------KLFGDRPSLSLQNRLDVALE----YLFSHPESKVIVSGGQGEDED 62
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 63 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDL---YNVKHAVVVSNTYHLYR 119
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + I Y ++EY I+
Sbjct: 120 TKIIAKRLGMKMEALAA------ETPIRSKRKMY-----VREYAAIM 155
>gi|313904234|ref|ZP_07837613.1| protein of unknown function DUF218 [Eubacterium cellulosolvens 6]
gi|313471036|gb|EFR66359.1| protein of unknown function DUF218 [Eubacterium cellulosolvens 6]
Length = 242
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/246 (18%), Positives = 88/246 (35%), Gaps = 52/246 (21%)
Query: 4 SWIFLIVSY------WHLLCQSIRK--IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR 55
FLI+S W LL + IR + ++ ++F+ I I+
Sbjct: 36 GLFFLILSIAAHFHCWALLPKKIRAGILVLVALGAIIFAVIEGCILS------------- 82
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
+ K IV+LG PS R+ + K +
Sbjct: 83 -GFHQKGKPGLKYIVVLGA--------QVFETRPSRVLRYRLDTAVDYLKE----NPETI 129
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I+SGG E+ V L ++G+ + I E +S T QN FS ++K +
Sbjct: 130 CIVSGGQGANEPRPEADVMAEYLEKAGISSERILKERKSETTTQNISFSRKLMKEEG--S 187
Query: 176 IILVSSAYHLKRSQLYFQHFGIN---TKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+ +V++ +H+ R+ + G+ A+ + + +L ++E+
Sbjct: 188 VAVVTNNFHVFRALQIARKNGLKDVCGIAAPTSFK-------------HLPNNMMREFFA 234
Query: 233 ILIAYY 238
+ ++
Sbjct: 235 EVKFWF 240
>gi|228958546|ref|ZP_04120266.1| hypothetical protein bthur0005_20520 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228801173|gb|EEM48070.1| hypothetical protein bthur0005_20520 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 162
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 15 YVLILGA--------KLFGDRPSLSLQNRLDVAVE----YLFSHPEVKVIVSGGQGEDED 62
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 63 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDL---YNVKHAVVVSNTYHLYR 119
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + I Y ++EY I+
Sbjct: 120 TKIIAKRLGMKMEALAA------ETPIRSKRKMY-----VREYAAIM 155
>gi|228952619|ref|ZP_04114695.1| hypothetical protein bthur0006_20170 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229069806|ref|ZP_04203089.1| hypothetical protein bcere0025_20080 [Bacillus cereus F65185]
gi|229150501|ref|ZP_04278717.1| hypothetical protein bcere0011_20520 [Bacillus cereus m1550]
gi|228632994|gb|EEK89607.1| hypothetical protein bcere0011_20520 [Bacillus cereus m1550]
gi|228713341|gb|EEL65233.1| hypothetical protein bcere0025_20080 [Bacillus cereus F65185]
gi|228807085|gb|EEM53628.1| hypothetical protein bthur0006_20170 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 185
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 38 YVLILGA--------KLFGDRPSLSLQNRLDVALE----YLFSHPEAKVIVSGGQGEDED 85
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 86 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDL---YNVKHAVVVSNTYHLYR 142
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + I Y ++EY I+
Sbjct: 143 TKIIAKRLGMKMEALAA------ETPIRSKRKMY-----VREYAAIM 178
>gi|229178646|ref|ZP_04306010.1| hypothetical protein bcere0005_20040 [Bacillus cereus 172560W]
gi|228604804|gb|EEK62261.1| hypothetical protein bcere0005_20040 [Bacillus cereus 172560W]
Length = 166
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 19 YVLILGA--------KLFGDRPSLSLQNRLDVALE----YLFSHPEAKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 67 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDL---YNVKHAVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + I Y ++EY I+
Sbjct: 124 TKIIAKRLGMKMEALAA------ETPIRSKRKMY-----VREYAAIM 159
>gi|165870553|ref|ZP_02215207.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167639676|ref|ZP_02397946.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170686976|ref|ZP_02878195.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170706657|ref|ZP_02897116.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|190565393|ref|ZP_03018313.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|196033843|ref|ZP_03101254.1| conserved hypothetical protein [Bacillus cereus W]
gi|227814904|ref|YP_002814913.1| hypothetical protein BAMEG_2315 [Bacillus anthracis str. CDC 684]
gi|228927349|ref|ZP_04090406.1| hypothetical protein bthur0010_20610 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228933586|ref|ZP_04096436.1| hypothetical protein bthur0009_20510 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228945900|ref|ZP_04108243.1| hypothetical protein bthur0007_20530 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229091270|ref|ZP_04222488.1| hypothetical protein bcere0021_20850 [Bacillus cereus Rock3-42]
gi|229121834|ref|ZP_04251054.1| hypothetical protein bcere0016_21340 [Bacillus cereus 95/8201]
gi|164713708|gb|EDR19231.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167512385|gb|EDR87761.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170128388|gb|EDS97256.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170669027|gb|EDT19771.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|190563420|gb|EDV17385.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|195993523|gb|EDX57480.1| conserved hypothetical protein [Bacillus cereus W]
gi|227005837|gb|ACP15580.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|228661623|gb|EEL17243.1| hypothetical protein bcere0016_21340 [Bacillus cereus 95/8201]
gi|228692036|gb|EEL45777.1| hypothetical protein bcere0021_20850 [Bacillus cereus Rock3-42]
gi|228813774|gb|EEM60052.1| hypothetical protein bthur0007_20530 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228826046|gb|EEM71829.1| hypothetical protein bthur0009_20510 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228832245|gb|EEM77825.1| hypothetical protein bthur0010_20610 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 166
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 19 YVLILGAKLFGDK--------PSLSLQNRLDVALE----YLYSHPDVKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 67 IPEAHSMRNYLMARGIDESRILIEDQSTNTYENVKFSMDL---YDVKHAVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + + Y ++EY I+
Sbjct: 124 TKIIAKRLGMKMEALAA------ETPMRSKRKMY-----VREYAAIM 159
>gi|194468048|ref|ZP_03074034.1| protein of unknown function DUF218 [Lactobacillus reuteri 100-23]
gi|194452901|gb|EDX41799.1| protein of unknown function DUF218 [Lactobacillus reuteri 100-23]
Length = 271
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 25/168 (14%)
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG P + +R+ + + +C + II+SGG QK +E
Sbjct: 111 VLGAAVKHGQVPPVL--------ATRLDKAI----NCWKTHQSAKIIVSGGIVQKAKESE 158
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ V L+ G+ I E ++L+T+QN F+S +IK + +++V+S +H+ R++
Sbjct: 159 AEVMAAYLIAHGIPARKIIRENKALNTWQNLAFASQLIKPQ--ETVVVVTSDFHVLRARA 216
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
Y + G+N + I + Y +++Y+GI+ ++
Sbjct: 217 YARKMGLN-----------WSFISSKTPWRYCPLTFIRDYLGIIRDHW 253
>gi|254706642|ref|ZP_05168470.1| hypothetical protein BpinM_06564 [Brucella pinnipedialis
M163/99/10]
gi|261314102|ref|ZP_05953299.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261303128|gb|EEY06625.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
Length = 131
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 5/117 (4%)
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E+ LL+ G + E +S +T +NA FS ++ + G+ +LV+SAYH+ R+
Sbjct: 7 EAETTRALLLDLGFSGNRYIFEGKSRNTVENAIFSQALAQPKPGETWLLVTSAYHMPRAV 66
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLS-----ANFYLTELALKEYIGILIAYYRGN 241
F+ G + A DY L +AL+E+ G+ ++ G
Sbjct: 67 GCFRKAGFDVTAWPVDYKTRTRETFGLYLESPNDALSRFSMALREWTGLAAYWWTGR 123
>gi|254992747|ref|ZP_05274937.1| hypothetical protein LmonocytoFSL_06569 [Listeria monocytogenes FSL
J2-064]
Length = 189
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 72/177 (40%), Gaps = 24/177 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG T P + PS R+ + + +I+SG
Sbjct: 33 KPSENADTVLILGAKVTGTPAV------PSLVLQERLDAAV----AYLNEYPKAKVIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V L+ G+ R I+ ET+S T +N ++S++ ++V+
Sbjct: 83 GQGADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S YH+ R+ + + GI+ + S F + ++E + I A+
Sbjct: 140 SDYHMYRALMLAKRQGIDASGLPA-----------TSKTFAKYKGMMREVLSITYAW 185
>gi|30262287|ref|NP_844664.1| hypothetical protein BA_2278 [Bacillus anthracis str. Ames]
gi|47527579|ref|YP_018928.1| hypothetical protein GBAA_2278 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49185134|ref|YP_028386.1| hypothetical protein BAS2124 [Bacillus anthracis str. Sterne]
gi|49479213|ref|YP_036390.1| hypothetical protein BT9727_2062 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|65319584|ref|ZP_00392543.1| COG1434: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
gi|118477705|ref|YP_894856.1| hypothetical protein BALH_2039 [Bacillus thuringiensis str. Al
Hakam]
gi|167632793|ref|ZP_02391119.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|177649292|ref|ZP_02932294.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|196039956|ref|ZP_03107259.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196046918|ref|ZP_03114139.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|218903420|ref|YP_002451254.1| hypothetical protein BCAH820_2304 [Bacillus cereus AH820]
gi|225864256|ref|YP_002749634.1| hypothetical protein BCA_2360 [Bacillus cereus 03BB102]
gi|229600915|ref|YP_002866624.1| hypothetical protein BAA_2343 [Bacillus anthracis str. A0248]
gi|254684861|ref|ZP_05148721.1| hypothetical protein BantC_13530 [Bacillus anthracis str.
CNEVA-9066]
gi|254722269|ref|ZP_05184057.1| hypothetical protein BantA1_07359 [Bacillus anthracis str. A1055]
gi|254737308|ref|ZP_05195012.1| hypothetical protein BantWNA_19319 [Bacillus anthracis str. Western
North America USA6153]
gi|254743507|ref|ZP_05201192.1| hypothetical protein BantKB_21307 [Bacillus anthracis str. Kruger
B]
gi|254751624|ref|ZP_05203661.1| hypothetical protein BantV_04116 [Bacillus anthracis str. Vollum]
gi|254760143|ref|ZP_05212167.1| hypothetical protein BantA9_17676 [Bacillus anthracis str.
Australia 94]
gi|30256918|gb|AAP26150.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47502727|gb|AAT31403.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49179061|gb|AAT54437.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|49330769|gb|AAT61415.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|118416930|gb|ABK85349.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
gi|167531605|gb|EDR94270.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|172084366|gb|EDT69424.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|196022293|gb|EDX60979.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|196029215|gb|EDX67819.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|218536887|gb|ACK89285.1| conserved hypothetical protein [Bacillus cereus AH820]
gi|225786065|gb|ACO26282.1| conserved hypothetical protein [Bacillus cereus 03BB102]
gi|229265323|gb|ACQ46960.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
Length = 185
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 38 YVLILGAKLFGDK--------PSLSLQNRLDVALE----YLYSHPDVKVIVSGGQGEDED 85
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 86 IPEAHSMRNYLMARGIDESRILIEDQSTNTYENVKFSMDL---YDVKHAVVVSNTYHLYR 142
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + + Y ++EY I+
Sbjct: 143 TKIIAKRLGMKMEALAA------ETPMRSKRKMY-----VREYAAIM 178
>gi|218233505|ref|YP_002366978.1| hypothetical protein BCB4264_A2261 [Bacillus cereus B4264]
gi|218161462|gb|ACK61454.1| conserved hypothetical protein [Bacillus cereus B4264]
Length = 185
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 38 YVLILGA--------KLFGDRPSLSLQNRLDVALE----YLFSHPEAKVIVSGGQGEDED 85
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 86 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDL---YNVKHAVVVSNTYHLYR 142
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + I Y ++EY I+
Sbjct: 143 TKIIAKRLGMKMEALAA------ETPIRSKRKMY-----VREYAAIM 178
>gi|257482212|ref|ZP_05636253.1| hypothetical protein PsyrptA_03022 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 141
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 59/134 (44%), Gaps = 6/134 (4%)
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
+ I+ +GG +E+ + L E S T++NA ++++
Sbjct: 1 MSKTSGLPILTTGGLHFDQPPSEASIMAQSL-HDDFGVTARWQEGLSRTTWENATMTAAV 59
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYL 222
++ + K ++LV+ A+H++R++ F+ G ++ +L + +P S F
Sbjct: 60 LQPLGIKRVVLVTQAWHMQRARWSFEKAGFTVVSAPVGFLGVDNARPFGGWLPESRVFTQ 119
Query: 223 TELALKEYIGILIA 236
+ + L E G+L+
Sbjct: 120 SGVLLNEAAGLLVY 133
>gi|172057015|ref|YP_001813475.1| hypothetical protein Exig_0978 [Exiguobacterium sibiricum 255-15]
gi|171989536|gb|ACB60458.1| protein of unknown function DUF218 [Exiguobacterium sibiricum
255-15]
Length = 195
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 76/209 (36%), Gaps = 38/209 (18%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+ + IGW + P +++LG G P
Sbjct: 24 AVFWFSIGW--------------FVAKGERPLANGKHPYVIVLGAGVK--------GETP 61
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S +RI R K T I+SGG ++E+ ++++G+ + +
Sbjct: 62 SLILSNRIEAAARYGKQF----PDTTFILSGGQGDGEAISEAEAMRRGMIQAGISEERLL 117
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
LE QS T +N FS ++ + +V+S +HL R++ + T A +
Sbjct: 118 LEDQSTSTTENLTFSKRLL-PASENRVSIVTSDFHLYRARKEAAQMNLKTDAIPA----- 171
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYY 238
PLS ++E + I++ Y+
Sbjct: 172 ---ATPLSGVLR---YGMRERVAIVVKYF 194
>gi|331085682|ref|ZP_08334765.1| hypothetical protein HMPREF0987_01068 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406605|gb|EGG86110.1| hypothetical protein HMPREF0987_01068 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 241
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 92/235 (39%), Gaps = 41/235 (17%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
FL+ + H + ++ I F+ F F +I + L K
Sbjct: 42 FLLAAIVHFSPRWLQYILLTLNFIAYFVFFAVQVIICSAMLTL------------PPKKL 89
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++I++LG +++ R+ + + + + +++SGG +
Sbjct: 90 DVIIVLGAQVRGKKITNSLKR--------RLDRGV----AYLKENPETRVVVSGGQGKGE 137
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ E+ L+ G+ + I LE +S +T++N ++S+ ++ +M I +VS+ +H+
Sbjct: 138 DVTEAFAMAQYLVSHGIAEEQISLEEKSRNTYENLKYSALLVDSMD-DRIGIVSNNFHIY 196
Query: 187 RSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
RS L + G + A+ + + ++E+ ++ Y
Sbjct: 197 RSLLLGRQIGYTRLYGIAAGCNPI-------------LFLNYMVREFFAVMRMYL 238
>gi|257785029|ref|YP_003180246.1| hypothetical protein Apar_1229 [Atopobium parvulum DSM 20469]
gi|257473536|gb|ACV51655.1| protein of unknown function DUF218 [Atopobium parvulum DSM 20469]
Length = 378
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/259 (18%), Positives = 90/259 (34%), Gaps = 50/259 (19%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
I LI S + + + LF G + L +S+ +L ++
Sbjct: 119 LILLIASPAIVSYLDPDTHRIVVVLLGLFMLEG-LWFSFTFVALLFYSWIYRIL--PRRR 175
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ I++ G G P + RI + + L+ QH ++SGG
Sbjct: 176 TYDYIIIHGAGLDGPRPTPLL--------AGRINKALELWNKQHQHG---KFVVSGGQGA 224
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI-------- 176
++E+ + LLE V D I +E +S T++N ++S +I N +
Sbjct: 225 DEVVSEAQAMRDYLLEKDVPLDAILMEDKSTTTWENLKYSIGIINNDWTASANTTSVDTS 284
Query: 177 -----------------ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
+V+S +H+ R Y + G+ S +
Sbjct: 285 ASSGSFAASTIGTDFTTAVVTSDFHVFRCAEYAHNLGLKADGIGSH-----------TKG 333
Query: 220 FYLTELALKEYIGILIAYY 238
+Y ++E+I I A+
Sbjct: 334 WYWPTAFIREFIAITKAHL 352
>gi|222095875|ref|YP_002529932.1| cytoplasmic protein [Bacillus cereus Q1]
gi|221239933|gb|ACM12643.1| hypothetical Cytosolic Protein [Bacillus cereus Q1]
Length = 185
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 18/149 (12%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
PS +R+ + +I+SGG + + E+ N L+ G++
Sbjct: 48 GDRPSLSLQNRLDVALE----YLYSHPEVKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDE 103
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I +E QS +T++N +FS + K+ ++VS+ YHL R+++ + G+ +A +
Sbjct: 104 SRILIEDQSTNTYENVKFSIDL---YDVKHAVVVSNTYHLYRTKIIAKRLGMKMEALAA- 159
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ I Y ++EY+ I+
Sbjct: 160 -----ETPIRSKRKMY-----VREYVAIM 178
>gi|226224989|ref|YP_002759096.1| hypothetical protein Lm4b_02410 [Listeria monocytogenes Clip81459]
gi|254825437|ref|ZP_05230438.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|254853556|ref|ZP_05242904.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|254933133|ref|ZP_05266492.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|255519961|ref|ZP_05387198.1| hypothetical protein LmonocFSL_01797 [Listeria monocytogenes FSL
J1-175]
gi|300765230|ref|ZP_07075215.1| hypothetical protein LMHG_11386 [Listeria monocytogenes FSL N1-017]
gi|225877451|emb|CAS06165.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258606929|gb|EEW19537.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|293584691|gb|EFF96723.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|293594680|gb|EFG02441.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|300514051|gb|EFK41113.1| hypothetical protein LMHG_11386 [Listeria monocytogenes FSL N1-017]
gi|328471359|gb|EGF42256.1| hypothetical protein LM220_10065 [Listeria monocytogenes 220]
gi|332312871|gb|EGJ25966.1| hypothetical protein LMOSA_4070 [Listeria monocytogenes str. Scott
A]
Length = 189
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 71/177 (40%), Gaps = 24/177 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG P + PS R+ + + +I+SG
Sbjct: 33 KPSENADTVLILGAKVNGTPAV------PSLVLQERLDAAV----AYLNEYPKAKVIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V L+ G+ R I+ ET+S T +N ++S++ ++V+
Sbjct: 83 GQGADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S YH+ R+ + + GI+ + S F + ++E + I A+
Sbjct: 140 SDYHMYRALMLAKRQGIDASGLPA-----------TSKTFAKYKGMMREVLSITYAW 185
>gi|237748053|ref|ZP_04578533.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229379415|gb|EEO29506.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 203
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 71/187 (37%), Gaps = 30/187 (16%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+ + F + +F I W + KK + ++LG
Sbjct: 6 KVALVSFCVFLIYIFCSIAW------------------FSTVDEKKTADAAIILGA---- 43
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
A PS RI + LYK+ +I +GG + +E+ V
Sbjct: 44 ----AAWYKRPSPVFEERINHGIWLYKNGYVK----KLIATGGKSKNAPFSEAFVARRYA 95
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+++ + +DI +E +SL T +N Q + +++ + I+VS H++R+ GI
Sbjct: 96 MKNQIPEEDILIEEESLTTRENLQNAKKLMEENHLSSAIIVSDPMHMRRAMQIANDLGIK 155
Query: 199 TKASCSD 205
+S +
Sbjct: 156 AWSSPTP 162
>gi|160935020|ref|ZP_02082406.1| hypothetical protein CLOLEP_03896 [Clostridium leptum DSM 753]
gi|156866473|gb|EDO59845.1| hypothetical protein CLOLEP_03896 [Clostridium leptum DSM 753]
Length = 262
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 44/224 (19%), Positives = 81/224 (36%), Gaps = 33/224 (14%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
L K+ + + L +F+ +G + + L+ K+ +V
Sbjct: 64 CLSSLWGHPGGKVLLSAASLALGAFLVFGAVMSCLMAAAIHR---------PPKENGTVV 114
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG +PS R+ K + I SGG ++E
Sbjct: 115 ILGC--------QVKGTQPSLMLTKRLEAA----KEYLDRNPEAMCIPSGGKGNGELVSE 162
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQ 189
+ L+E G++ + I E QS DT +N + S ++ + K++ILVS +H R+
Sbjct: 163 AQAMKAWLVEHGIDENRIYPEAQSRDTVENIRNSKEIMDSKGLPKDMILVSDGFHQYRAG 222
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
L Q GI A + + + L ++E +
Sbjct: 223 LIAQKQGIEAGAVSA-----------QTPWYTLATYWMREIFAL 255
>gi|46908614|ref|YP_015003.1| hypothetical protein LMOf2365_2414 [Listeria monocytogenes serotype
4b str. F2365]
gi|47093642|ref|ZP_00231398.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|46881886|gb|AAT05180.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b
str. F2365]
gi|47017977|gb|EAL08754.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|328465305|gb|EGF36562.1| hypothetical protein LM1816_14015 [Listeria monocytogenes 1816]
Length = 189
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 71/177 (40%), Gaps = 24/177 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG P + PS R+ + + +I+SG
Sbjct: 33 KPSENADTVLILGAKVNGTPAV------PSLVLQERLDAAV----AYLNEYPKAKVIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V L+ G+ R I+ ET+S T +N ++S++ ++V+
Sbjct: 83 GQGADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S YH+ R+ + + GI+ + S F + ++E + I A+
Sbjct: 140 SDYHMYRALMLAKRQGIDASGLPA-----------TSKTFAKYKGMMREVLSITYAW 185
>gi|206971658|ref|ZP_03232608.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|206733643|gb|EDZ50815.1| conserved hypothetical protein [Bacillus cereus AH1134]
Length = 185
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 38 YVLILGA--------KLFGDRPSLSLQNRLDVALE----YLFSHPEAKVIVSGGQGEDED 85
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 86 IPEAHSMRNYLMARGIDESRILIEDQSTNTYENLKFSMDL---YNVKHAVVVSNTYHLYR 142
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + I Y ++EY I+
Sbjct: 143 TKIIAKRLGMKMEALAA------ETPIRSKRKMY-----VREYAAIM 178
>gi|293609314|ref|ZP_06691616.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827766|gb|EFF86129.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 374
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ P+ + IV+LG G T+ I + + R+ +T+ + K H I
Sbjct: 199 PVQPKKLSEPYAIVVLGGGLTLDKN--GKDIVVNGYTRLRLEKTLEVEKQN-----HLPI 251
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN- 175
++SG E+ L E GV+ LE +S++T +N +FSS +++ G
Sbjct: 252 VLSG--------VEAPYMQAWLKERGVDAK--LLEKRSMNTCENTRFSSLLLQKKGGAPT 301
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++LV+ YH+ R++ F GI T + P N+ + A E + +
Sbjct: 302 VMLVTDEYHMPRTRRLFALNGIETIPVVAPMPTPLTRWQPSVQNYDHSRRANYELLATIR 361
Query: 236 AYYRGN 241
G+
Sbjct: 362 DMLFGS 367
>gi|326939983|gb|AEA15879.1| putative cytoplasmic protein [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 185
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 84/202 (41%), Gaps = 27/202 (13%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
+ F+ ++P + + ++ F + + + +++LG PS
Sbjct: 4 WIFLMILLLPPLYIIYMTFRMNK-VAREKLSYHSPYVLILGA--------KLFGDRPSLS 54
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
+R+ + +I+SGG + + E+ N L+ G++ I +E
Sbjct: 55 LQNRLDVALE----YLFSHPEAKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESRILIED 110
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
QS +T++N +FS + K+ ++VS+ YHL R+++ + G+ +A + +
Sbjct: 111 QSTNTYENLKFSMDL---YNVKHAVVVSNTYHLYRTKIIAKRLGMKMEALAA------ET 161
Query: 213 IIPLSANFYLTELALKEYIGIL 234
I Y ++EY I+
Sbjct: 162 PIRSKRKMY-----VREYAAIM 178
>gi|332968539|gb|EGK07600.1| protein of hypothetical function DUF218 [Kingella kingae ATCC
23330]
Length = 207
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 25/202 (12%)
Query: 33 FSFIGWGIIPTILLKHLQ-------FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+ G G + L+ LQ ++Y RP P + + V+LG A
Sbjct: 10 YWLRGLG-LSIALISSLQLWCVWQVYAYSRPQPLPD---EADAAVVLGA--------AAW 57
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
+PS RI + LY++ + II +GG P+ E+ V ++ G+
Sbjct: 58 GNKPSPVFRERINHALTLYQTGRVK----KIIFTGGTPKAGFATEAEVARQYAIKQGIAD 113
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS--C 203
DI ET+S DTFQN + ++K ++I+VS YH+ R+ Q +N AS
Sbjct: 114 QDIVFETRSKDTFQNLANTRFLMKKHHLNSVIIVSDPYHMARAMNMAQDLQLNAYASHTP 173
Query: 204 SDYLNAYYSIIPLSANFYLTEL 225
+ N + S + ++ EL
Sbjct: 174 TSRYNNARFFVEESYSLFVYEL 195
>gi|227878475|ref|ZP_03996414.1| membrane protein [Lactobacillus crispatus JV-V01]
gi|227861926|gb|EEJ69506.1| membrane protein [Lactobacillus crispatus JV-V01]
Length = 278
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/229 (16%), Positives = 86/229 (37%), Gaps = 28/229 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ + + L I ++ + + ++ +++ L
Sbjct: 53 IIFFLFLYPLVGRISHDSWLKYPYIFLWLVIIYLVTIMMMYTLTSWINLINWH---MPHL 109
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G P + +RI + +Y + +I+SGG
Sbjct: 110 DYIVVLGAGIMGTKVTPLL--------AARISRGIEIYH----KNPGSKLIMSGGQGPGE 157
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ E+ + G+ ++DI +E +S T QN QFS +++K +V+S+YH+
Sbjct: 158 DIPEAAAMAEYAEKLGINKNDIIIENKSKTTQQNLQFSHALMKPN--SRFCIVTSSYHVY 215
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
R+ + + G+ + + ++ ++E+I L+
Sbjct: 216 RALVLAKRQGLKCTGYGA-----------KTKWYFTLNAFVREFIAYLV 253
>gi|229017592|ref|ZP_04174486.1| hypothetical protein bcere0030_21400 [Bacillus cereus AH1273]
gi|229023809|ref|ZP_04180294.1| hypothetical protein bcere0029_21380 [Bacillus cereus AH1272]
gi|228737494|gb|EEL88004.1| hypothetical protein bcere0029_21380 [Bacillus cereus AH1272]
gi|228743661|gb|EEL93767.1| hypothetical protein bcere0030_21400 [Bacillus cereus AH1273]
Length = 166
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 19 YVLILGA--------KLFGDRPSLSLQNRLDVALE----YLYSHPEVKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E +S +T++N +FS + K+ ++VS+ YHL R
Sbjct: 67 IPEAHSMRNYLMVHGIDESRILMEDRSTNTYENLKFSMDLFD---VKHAVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + + Y ++EY I+
Sbjct: 124 TKIIARRLGMKMEALAA------ETPMRSKRKMY-----VREYAAIM 159
>gi|229085219|ref|ZP_04217462.1| hypothetical protein bcere0022_18350 [Bacillus cereus Rock3-44]
gi|228698086|gb|EEL50828.1| hypothetical protein bcere0022_18350 [Bacillus cereus Rock3-44]
Length = 185
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 38 WGIIPTILLKHLQFSYQ----RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
W ++ +L L Y + + + +++LG PS
Sbjct: 4 WILLVILLFPPLCMMYMTYRMKKVAYEKVSDHAPYVLILGAKLFGDK--------PSLSL 55
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
+R+ + +I+SGG + + E+ N L++ G+E I +E +
Sbjct: 56 QNRLDVAL----MYVNSHPEAKVIVSGGQGEDEDIPEAHSMRNYLIQHGIEEGRIFIEDR 111
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG--INTKASCSDYLNAYY 211
S T++N +FS + K+ ++VS+ YHL R+++ + G + + A+ + +
Sbjct: 112 STSTYENLKFSMDL---YHVKHAVVVSNTYHLYRTKIIAKRLGMQMESLAAPTPRRSKKK 168
Query: 212 SIIPLSANFYLTELALKEYIGIL 234
+ ++EY I+
Sbjct: 169 AY-------------IREYAAII 178
>gi|327402034|ref|YP_004342872.1| hypothetical protein Fluta_0024 [Fluviicola taffensis DSM 16823]
gi|327317542|gb|AEA42034.1| protein of unknown function DUF218 [Fluviicola taffensis DSM 16823]
Length = 255
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/249 (20%), Positives = 96/249 (38%), Gaps = 22/249 (8%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+W+ + + + +++R + + F T + K ++
Sbjct: 17 TWLLIAIYFALFSKKTVRAKRAKYAAIFIALFFSN----TFIYKEFCRQWEIFGTPISQV 72
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG--G 121
K ++ ++L + + RI++T+ LYK+ K I+ISG G
Sbjct: 73 KHYDVAIVLTGMAEYNNDLQVLSARRGI---DRIWQTISLYKAGKID----RILISGDHG 125
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IILV 179
GL E+ L++ G+ I ET+S +T++NA S ++ + + I+LV
Sbjct: 126 YLIDKGLHEATQLKEILVKWGIPEHVIITETKSKNTYENAVESQKIVNRLFPNSNAILLV 185
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-------IIPLSANFYLTELALKEYIG 232
+S H++R++ F G+ +D IIP + LKE IG
Sbjct: 186 TSGRHMRRARACFNKLGLKCDTYSTDLFTGPNRSFTFDELIIPDVSTMSDWHSLLKEMIG 245
Query: 233 ILIAYYRGN 241
+ G
Sbjct: 246 YIAYDMTGK 254
>gi|229167111|ref|ZP_04294854.1| hypothetical protein bcere0007_20770 [Bacillus cereus AH621]
gi|228616345|gb|EEK73427.1| hypothetical protein bcere0007_20770 [Bacillus cereus AH621]
Length = 166
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + + + +I+SGG +
Sbjct: 19 YVLILGA--------KLFGDRPSLSLQNRLDIALEYLHAHPE----VKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ + I +E S +T++N +FS + K+ ++VS+ YHL R
Sbjct: 67 IPEAHSMRNYLMVHGIDENRILIEDCSTNTYENLKFSMDL---YDVKHAVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + GI +A ++ + ++EY I+
Sbjct: 124 TKIIAKRLGIKMEALAAETPRRSKK-----------KAYVREYAAIM 159
>gi|218133156|ref|ZP_03461960.1| hypothetical protein BACPEC_01018 [Bacteroides pectinophilus ATCC
43243]
gi|217992029|gb|EEC58033.1| hypothetical protein BACPEC_01018 [Bacteroides pectinophilus ATCC
43243]
Length = 256
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 94/243 (38%), Gaps = 23/243 (9%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ ++I+L +S + I ++ +L +++ + ++ + +L +
Sbjct: 28 MFNYIWLAISLFFGFVFYISRMEACGRIVLHVWTKTAFTVVMILGFGYLAVLEGLVISKM 87
Query: 61 QWKKDG--NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
K DG + +++LG S R+ +C + CTII+
Sbjct: 88 NAKPDGGCDYMIVLGAHVKGD--------VVSKSLAQRLDTAYEY--ACSEDGKECTIIV 137
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+GG + + E+ L E G+ D I +E +S DT N + S + + ++++
Sbjct: 138 AGGKGKGESVTEAFAMKRYLTEKGINPDRILMEDKSTDTQLNIKLSRELYIDDTASDVVI 197
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
SS++H+ R+ G+N + S L L+E +GI
Sbjct: 198 ASSSFHIFRALKLANAQGLNNV----------QGLAAPSNKILLVNYMLREAVGITKEIV 247
Query: 239 RGN 241
GN
Sbjct: 248 FGN 250
>gi|184158561|ref|YP_001846900.1| hypothetical protein ACICU_02241 [Acinetobacter baumannii ACICU]
gi|239501574|ref|ZP_04660884.1| hypothetical protein AbauAB_04621 [Acinetobacter baumannii AB900]
gi|332875330|ref|ZP_08443159.1| hypothetical protein HMPREF0022_02794 [Acinetobacter baumannii
6014059]
gi|183210155|gb|ACC57553.1| hypothetical protein ACICU_02241 [Acinetobacter baumannii ACICU]
gi|323518483|gb|ADX92864.1| hypothetical protein ABTW07_2440 [Acinetobacter baumannii
TCDC-AB0715]
gi|332736434|gb|EGJ67432.1| hypothetical protein HMPREF0022_02794 [Acinetobacter baumannii
6014059]
Length = 376
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 21/194 (10%)
Query: 52 SYQRPLLSPQWKKDGN---IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
Y R P K + IV+LG G T+ I + + R+ +T+ +
Sbjct: 193 EYVRKNPLPAQPKKLSEPYAIVVLGGGLTLDKN--GKDIVVNSYTRLRLEKTLEV----- 245
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ H I++SG E+ L GV+ LE +S++T +N +FSS ++
Sbjct: 246 EKKNHLPIVLSG--------VEAPYMQAWLKARGVDAK--LLEKRSMNTCENTRFSSLLL 295
Query: 169 KNMQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ G ++LV+ YH+ R++ F GI T + P + N+ + A
Sbjct: 296 QKKGGAPTVMLVTDEYHMPRTRRLFALNGIETIPVTAPMPTPLTRWQPSTQNYDHSRRAN 355
Query: 228 KEYIGILIAYYRGN 241
E + + G+
Sbjct: 356 YELLATIRDMLFGS 369
>gi|325957712|ref|YP_004293124.1| hypothetical protein LAC30SC_10460 [Lactobacillus acidophilus 30SC]
gi|325334277|gb|ADZ08185.1| hypothetical protein LAC30SC_10460 [Lactobacillus acidophilus 30SC]
Length = 367
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 89/243 (36%), Gaps = 31/243 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ I ++V L + + L+ +G + +L L Y R
Sbjct: 122 VLIFSILVLVGPGKYLPHWLSALLASIPATALY--LGLVLYNFLLNLLLYQIYPR----- 174
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIIS 119
+ + +++LG G + S +RI ++ + ++ II+S
Sbjct: 175 --RYKQDYLIVLGAGLLNGDQV-------SKLLAARINRAIQFSNRQYQKGRKRPIIIMS 225
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NI 176
GG + E + GV D I +E QS +T+QN FS + G
Sbjct: 226 GGQGPDEKIPEGLAMARFAQHRGVPTDQILIEDQSKNTYQNMLFSKRVATKDFGSEKFRA 285
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 286 TFFSNNYHIIRAALLAKEVGLKANGVGA-----------FTRLYYLPNAIIREFAGVFVM 334
Query: 237 YYR 239
+ R
Sbjct: 335 HKR 337
>gi|125623301|ref|YP_001031784.1| hypothetical protein llmg_0434 [Lactococcus lactis subsp. cremoris
MG1363]
gi|124492109|emb|CAL97038.1| SanA protein homolog [Lactococcus lactis subsp. cremoris MG1363]
gi|300070052|gb|ADJ59452.1| hypothetical protein LLNZ_02260 [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 194
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 61/180 (33%), Gaps = 23/180 (12%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ + I++LG+ RI Q E + + II+SG
Sbjct: 36 DKAREIDTILVLGS-----------RINADEQPAKITQERLDAALLLAAKNPQAKIIVSG 84
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
++E+ L+ + D I E ++ DT +N +S ++V+
Sbjct: 85 AKGADEPVSEAFSMKKYLMAHAISADRIISENKATDTAENLSYSKKYFHG----KTVVVT 140
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +HL R+ G+ + + Y E +G++ A+ G
Sbjct: 141 NDFHLYRALYLASRQGLKVEGYAAKTEVINP--------LYYPNYYGHEVLGLIYAFVFG 192
>gi|169633752|ref|YP_001707488.1| hypothetical protein ABSDF2200 [Acinetobacter baumannii SDF]
gi|169152544|emb|CAP01524.1| conserved hypothetical protein [Acinetobacter baumannii]
Length = 376
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 21/194 (10%)
Query: 52 SYQRPLLSPQWKKDGN---IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
Y R P K + IV+LG G T+ I + + R+ +T+ +
Sbjct: 193 EYVRKNPLPAQPKKLSEPYAIVVLGGGLTLDKN--GKDIVVNSYTRLRLEKTLEV----- 245
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ H I++SG E+ L GV+ LE +S++T +N +FSS ++
Sbjct: 246 EKKNHLPIVLSG--------VEAPYMQAWLKARGVDAK--LLEKRSMNTCENTRFSSLLL 295
Query: 169 KNMQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ G ++LV+ YH+ R++ F GI T + P + N+ + A
Sbjct: 296 QKKGGAPTVMLVTDEYHMPRTRRLFALNGIETIPVTAPMPTPLTRWQPSTQNYDHSRRAN 355
Query: 228 KEYIGILIAYYRGN 241
E + + G+
Sbjct: 356 YELLATIRDMLFGS 369
>gi|169795635|ref|YP_001713428.1| hypothetical protein ABAYE1527 [Acinetobacter baumannii AYE]
gi|213158421|ref|YP_002319719.1| hypothetical protein AB57_2370 [Acinetobacter baumannii AB0057]
gi|215483123|ref|YP_002325330.1| hypothetical protein ABBFA_001427 [Acinetobacter baumannii
AB307-0294]
gi|301346826|ref|ZP_07227567.1| hypothetical protein AbauAB0_11281 [Acinetobacter baumannii AB056]
gi|301510634|ref|ZP_07235871.1| hypothetical protein AbauAB05_03624 [Acinetobacter baumannii AB058]
gi|301594655|ref|ZP_07239663.1| hypothetical protein AbauAB059_02560 [Acinetobacter baumannii
AB059]
gi|332850908|ref|ZP_08433061.1| hypothetical protein HMPREF0021_00632 [Acinetobacter baumannii
6013150]
gi|332871353|ref|ZP_08439897.1| hypothetical protein HMPREF0020_03552 [Acinetobacter baumannii
6013113]
gi|169148562|emb|CAM86428.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|213057581|gb|ACJ42483.1| hypothetical protein AB57_2370 [Acinetobacter baumannii AB0057]
gi|213988727|gb|ACJ59026.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|332730343|gb|EGJ61665.1| hypothetical protein HMPREF0021_00632 [Acinetobacter baumannii
6013150]
gi|332731543|gb|EGJ62830.1| hypothetical protein HMPREF0020_03552 [Acinetobacter baumannii
6013113]
Length = 374
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 21/194 (10%)
Query: 52 SYQRPLLSPQWKKDGN---IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
Y R P K + IV+LG G T+ I + + R+ +T+ +
Sbjct: 191 EYVRKNPLPAQPKKLSEPYAIVVLGGGLTLDKN--GKDIVVNSYTRLRLEKTLEV----- 243
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ H I++SG E+ L GV+ LE +S++T +N +FSS ++
Sbjct: 244 EKKNHLPIVLSG--------VEAPYMQAWLKARGVDAK--LLEKRSMNTCENTRFSSLLL 293
Query: 169 KNMQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ G ++LV+ YH+ R++ F GI T + P + N+ + A
Sbjct: 294 QKKGGAPTVMLVTDEYHMPRTRRLFALNGIETIPVTAPMPTPLTRWQPSTQNYDHSRRAN 353
Query: 228 KEYIGILIAYYRGN 241
E + + G+
Sbjct: 354 YELLATIRDMLFGS 367
>gi|313124735|ref|YP_004034994.1| hypothetical protein LDBND_2002 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312281298|gb|ADQ62017.1| Hypothetical protein LDBND_2002 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 366
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 50/243 (20%), Positives = 100/243 (41%), Gaps = 36/243 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF---FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
ML W+F+ + ++ + ++ F + + L + + ++ +L + + YQ+
Sbjct: 125 MLGLWVFIFIGHFTRSTPAGLRLILDIFPTVAVYLAAVMYNFLVNLLLYQIVPRRYQQ-- 182
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTI 116
N +++LG G I I+ +RI ++ Y ++
Sbjct: 183 ---------NYLIVLGAGLIHGDQISNIQ-------AARINRAIQFAYHQQEKGQPLPKF 226
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-- 174
I+SGG ++E+ ++ GV ++ I LE QS +T QN +FS + N G
Sbjct: 227 IMSGGQGPNEKISEAAAMAAYAIKRGVPKELILLEDQSRNTEQNMEFSQIVAYNDYGNDN 286
Query: 175 -NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+S YH+ RS +Y + G++ S + +YL L+E+ G+
Sbjct: 287 FKACFFTSNYHVFRSAIYAKRAGLDANGIGS-----------YTRPYYLPNAVLREFAGM 335
Query: 234 LIA 236
+
Sbjct: 336 FVM 338
>gi|322507673|gb|ADX03127.1| Putative uncharacterized protein [Acinetobacter baumannii 1656-2]
Length = 376
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 21/194 (10%)
Query: 52 SYQRPLLSPQWKKDGN---IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
Y R P K + IV+LG G T+ I + + R+ +T+ +
Sbjct: 193 EYVRKNPLPAQPKKLSEPYAIVVLGGGLTLDKN--GKDIVVNSYTRLRLEKTLEV----- 245
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ H I++SG E+ L GV+ LE +S++T +N +FSS ++
Sbjct: 246 EKKNHLPIVLSG--------VEAPYMQAWLKARGVDAK--LLEKRSMNTCENTRFSSLLL 295
Query: 169 KNMQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ G ++LV+ YH+ R++ F GI T + P + N+ + A
Sbjct: 296 QKKGGAPTVMLVTDEYHMPRTRRLFALNGIETIPVTAPMPTPLTRWQPSTQNYDHSRRAN 355
Query: 228 KEYIGILIAYYRGN 241
E + + G+
Sbjct: 356 YELLATIRDMLFGS 369
>gi|229161248|ref|ZP_04289235.1| hypothetical protein bcere0009_20370 [Bacillus cereus R309803]
gi|228622344|gb|EEK79183.1| hypothetical protein bcere0009_20370 [Bacillus cereus R309803]
Length = 166
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 19 YVLILGA--------KLFGDRPSLSLQNRLDVALE----YLYSHPEAKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 67 IPEAHSMRNYLMVHGIDDSRILIEDQSTNTYENVKFSMDL---YDVKHAVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + + Y ++EY I+
Sbjct: 124 TKIIAKRLGMKMEALAA------ETPMRSKRKMY-----VREYAAIM 159
>gi|228908043|ref|ZP_04071891.1| hypothetical protein bthur0013_22050 [Bacillus thuringiensis IBL
200]
gi|228851461|gb|EEM96267.1| hypothetical protein bthur0013_22050 [Bacillus thuringiensis IBL
200]
Length = 162
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 15 YVLILGA--------KLFGDRPSLSLQNRLDVALE----YLFSHPEAKVIVSGGQGEDED 62
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + ++ ++VS+ YHL R
Sbjct: 63 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSMDL---YNVEHAVVVSNTYHLYR 119
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + + Y ++EY I+
Sbjct: 120 TKIIAKRLGMKMEALAA------ETPMRSKRKMY-----VREYAAIM 155
>gi|52143179|ref|YP_083650.1| hypothetical protein BCZK2058 [Bacillus cereus E33L]
gi|51976648|gb|AAU18198.1| conserved hypothetical protein [Bacillus cereus E33L]
Length = 185
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG +PS +R+ + +I+SGG +
Sbjct: 38 YVLILGA--------KLFGDKPSLSLQNRLDVALE----YLLSHPTAKVIVSGGQGEDED 85
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 86 IPEAHSMRNYLMARGIDESRILIEDQSTNTYENVKFSMDL---YDVKHAVVVSNTYHLYR 142
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + + Y ++EY I+
Sbjct: 143 TKIIAKRLGMKMEALAA------ETPMRSKRKMY-----VREYAAIM 178
>gi|104774771|ref|YP_619751.1| hypothetical protein Ldb2161 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514906|ref|YP_813812.1| hypothetical protein LBUL_1995 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|103423852|emb|CAI98885.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116094221|gb|ABJ59374.1| hypothetical protein LBUL_1995 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 366
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 50/243 (20%), Positives = 100/243 (41%), Gaps = 36/243 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF---FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
ML W+F+ + ++ + ++ F + + L + + ++ +L + + YQ+
Sbjct: 125 MLGLWVFIFIGHFTRSTPTGLRLILDIFPTVAVYLAAVMYNFLVNLLLYQIVPRRYQQ-- 182
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTI 116
N +++LG G I I+ +RI ++ Y ++
Sbjct: 183 ---------NYLIVLGAGLIHGDQISNIQ-------AARINRAIQFAYHQQEKGQPLPKF 226
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-- 174
I+SGG ++E+ ++ GV ++ I LE QS +T QN +FS + N G
Sbjct: 227 IMSGGQGPNEKISEAAAMAAYAIKRGVPKELILLEDQSRNTEQNMEFSQIVAYNDYGNDN 286
Query: 175 -NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+S YH+ RS +Y + G++ S + +YL L+E+ G+
Sbjct: 287 FKACFFTSNYHVFRSAIYAKRAGLDANGIGS-----------YTRPYYLPNAVLREFAGM 335
Query: 234 LIA 236
+
Sbjct: 336 FVM 338
>gi|324326310|gb|ADY21570.1| putative cytoplasmic protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 185
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 38 YVLILGAKLFGDK--------PSLSLQNRLDVALE----YLYSHPEVKVIVSGGQGEDED 85
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 86 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENVKFSIDL---YDVKHAVVVSNTYHLYR 142
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + I Y ++EY I+
Sbjct: 143 TKIIAKRLGMKMEALAA------ETPIRSKRKMY-----VREYAAIM 178
>gi|163840431|ref|YP_001624836.1| hypothetical protein RSal33209_1686 [Renibacterium salmoninarum
ATCC 33209]
gi|162953907|gb|ABY23422.1| hypothetical membrane protein [Renibacterium salmoninarum ATCC
33209]
Length = 282
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++++ + +V+LG+ P +R SR+ + + LY+ +I SG
Sbjct: 97 RYQRSPDAVVVLGSQIINGKAPPLLR--------SRLDKGLELYREISV-GAAPLLIPSG 147
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM-QGKNIILV 179
G E L+++G D+ E ++++T QN QFS+++ + + ++++V
Sbjct: 148 GQGVGESRPEGAAMAEYLVDAGAPPHDVVPELRAVNTAQNLQFSAAVAREYERLGSLVVV 207
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ YH+ R+ L + GIN + S +A ++L L+E++ IL +
Sbjct: 208 TNNYHVLRAALLSRKLGINAEVVGSP-----------TAGYFLPSAFLREFVAILKEHK 255
>gi|300811552|ref|ZP_07092040.1| putative membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497470|gb|EFK32504.1| putative membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 366
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 50/243 (20%), Positives = 100/243 (41%), Gaps = 36/243 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF---FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
ML W+F+ + ++ + ++ F + + L + + ++ +L + + YQ+
Sbjct: 125 MLGLWVFIFIGHFTRSTPTGLRLILDIFPTVAVYLAAVMYNFLVNLLLYQIVPRRYQQ-- 182
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTI 116
N +++LG G I I+ +RI ++ Y ++
Sbjct: 183 ---------NYLIVLGAGLIHGDQISNIQ-------AARINRAIQFAYHQQEKGQPLPKF 226
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-- 174
I+SGG ++E+ ++ GV ++ I LE QS +T QN +FS + N G
Sbjct: 227 IMSGGQGPNEKISEAAAMAAYAIKRGVPKELILLEDQSRNTEQNMEFSQIVAYNDYGNDN 286
Query: 175 -NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+S YH+ RS +Y + G++ S + +YL L+E+ G+
Sbjct: 287 FKACFFTSNYHVFRSAIYAKRAGLDANGIGS-----------YTRPYYLPNAVLREFAGM 335
Query: 234 LIA 236
+
Sbjct: 336 FVM 338
>gi|229138983|ref|ZP_04267560.1| hypothetical protein bcere0013_20960 [Bacillus cereus BDRD-ST26]
gi|228644338|gb|EEL00593.1| hypothetical protein bcere0013_20960 [Bacillus cereus BDRD-ST26]
Length = 162
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 18/149 (12%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
PS +R+ + +I+SGG + + E+ N L+ G++
Sbjct: 25 GDRPSLSLQNRLDVALE----YLYSHPEVKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDE 80
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I +E QS +T++N +FS + K+ ++VS+ YHL R+++ + G+ +A +
Sbjct: 81 RRILIEDQSTNTYENVKFSIDL---YDVKHAVVVSNTYHLYRTKIIAKRLGMKMEALAA- 136
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ I Y ++EY+ I+
Sbjct: 137 -----ETPIRSKRKMY-----VREYVAIM 155
>gi|225352283|ref|ZP_03743306.1| hypothetical protein BIFPSEUDO_03899 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157530|gb|EEG70869.1| hypothetical protein BIFPSEUDO_03899 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 249
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 78/204 (38%), Gaps = 26/204 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ ++ +W +L + +R ++ + + +G + ++ + Q
Sbjct: 49 VLGFGVLFQWWAMLPRLVR---GVAIAVACVGLVAFGTVEGCIVSQ---------MHAQG 96
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K D + +V+LG + PS R+ + + + + I+SGG
Sbjct: 97 KSDLDYVVVLGA--------QVRKSGPSLVLRYRLDKAIE----YLDENPNTICIVSGGK 144
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
E+ + L E G+ I E +S T +N S +I + ++ ++++
Sbjct: 145 GPNEPFPEAQGMADYLKEHGIAEQRILEEPESKTTEENIVNSKKLISDDN-ASVGVITNN 203
Query: 183 YHLKRSQLYFQHFGI-NTKASCSD 205
+H+ R+ +G+ N + +
Sbjct: 204 FHMFRALQIADKYGLDNAQGIAAG 227
>gi|301053815|ref|YP_003792026.1| hypothetical protein BACI_c22410 [Bacillus anthracis CI]
gi|300375984|gb|ADK04888.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
Length = 185
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 69/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 38 YVLILGAKLFGDK--------PSLSLQNRLDVALE----YLYSHPDVKVIVSGGQGEDED 85
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 86 IPEAHSMRNYLMARGIDESRILIEDQSTNTYENVKFSMDL---YDVKHAVVVSNTYHLYR 142
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ + + + + Y ++EY I+
Sbjct: 143 TKIIAKRLGMKMETLAA------ETPMRSKRKMY-----VREYAAIM 178
>gi|325685025|gb|EGD27163.1| hypothetical protein HMPREF5505_1175 [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 366
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 50/243 (20%), Positives = 100/243 (41%), Gaps = 36/243 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF---FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
ML W+F+ + ++ + ++ F + + L + + ++ +L + + YQ+
Sbjct: 125 MLGLWVFIFIGHFTRSTPTGLRLILDIFPTVAVYLAAVMYNFLVNLLLYQIVPRRYQQ-- 182
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTI 116
N +++LG G I I+ +RI ++ Y ++
Sbjct: 183 ---------NYLIVLGAGLIHGDQISNIQ-------AARINRAIQFAYHQQEKGQPLPKF 226
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-- 174
I+SGG ++E+ ++ GV ++ I LE QS +T QN +FS + N G
Sbjct: 227 IMSGGQGPNEKISEAAAMAAYAIKRGVPKELILLEDQSRNTEQNMEFSQIVAYNDYGNDN 286
Query: 175 -NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+S YH+ RS +Y + G++ S + +YL L+E+ G+
Sbjct: 287 FKACFFTSNYHVFRSAIYAKRAGLDANGIGS-----------YTRPYYLPNAVLREFAGM 335
Query: 234 LIA 236
+
Sbjct: 336 FVM 338
>gi|238916610|ref|YP_002930127.1| hypothetical protein EUBELI_00667 [Eubacterium eligens ATCC 27750]
gi|238871970|gb|ACR71680.1| Hypothetical protein EUBELI_00667 [Eubacterium eligens ATCC 27750]
Length = 258
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 50/246 (20%), Positives = 100/246 (40%), Gaps = 34/246 (13%)
Query: 3 LSWIFLIVSYWHLLCQSIR----KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+I+L+ + + L ++R K +L FI L ++ + ++
Sbjct: 39 FIFIWLLGAVFFGLVFAVRVLEIKGIIHVAKVLRICFIVIMATGASLFIFIEALIIKGMM 98
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ + K + + I++LG + +R+ + S + TII+
Sbjct: 99 A-KPKDNCDYIIVLGCQIRGD--------HITRSLKNRLDVAV----SYAIDNPDTTIIV 145
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG + E+ N L+ G++ I E S DT +N ++S I+N + +
Sbjct: 146 SGGRGKGENTTEAFAMYNYLVSKGIDGSRIIQEDNSTDTSENMKYSVQYIENTD-SLVGI 204
Query: 179 VSSAYHLKRSQLYFQHFGINTK---ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
V++ +H+ RS+L +H G+N + SD++ ++E IGI+
Sbjct: 205 VTNNFHIARSRLLARHAGLNNTCGMPAESDHV-------------LFINYMVREAIGIVK 251
Query: 236 AYYRGN 241
+ GN
Sbjct: 252 DFVFGN 257
>gi|227893874|ref|ZP_04011679.1| integral membrane protein [Lactobacillus ultunensis DSM 16047]
gi|227864363|gb|EEJ71784.1| integral membrane protein [Lactobacillus ultunensis DSM 16047]
Length = 367
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 92/243 (37%), Gaps = 32/243 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++LS IFL L + + + ++ +G + +L L Y R
Sbjct: 123 LVLSIIFL-FGPGQYLPHWLSALLASIPAIAIY--LGLVLYNFLLNLLLYQIYPR----- 174
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIIS 119
+ + +++LG G + S + I ++ + ++ +I+S
Sbjct: 175 --RYKQDYLIVLGAGLINGDQV-------SKLLAACINRAIQYSNRQYQKGRKRPILIMS 225
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGK--NI 176
GG ++E + GV D I +E QS +T+QN FS + IK+
Sbjct: 226 GGQGPDEKISEGLAMARFAHHRGVSPDQILIEDQSKNTYQNMLFSKRLAIKDFGSNKFRA 285
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 286 TFFSNNYHIFRAGLLAKEVGLKANGVGA-----------FTRFYYLPNAVIREFAGVFVM 334
Query: 237 YYR 239
+ R
Sbjct: 335 HKR 337
>gi|206973669|ref|ZP_03234587.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217959789|ref|YP_002338341.1| hypothetical protein BCAH187_A2388 [Bacillus cereus AH187]
gi|206747825|gb|EDZ59214.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217068109|gb|ACJ82359.1| conserved hypothetical protein [Bacillus cereus AH187]
Length = 185
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 18/149 (12%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
PS +R+ + +I+SGG + + E+ N L+ G++
Sbjct: 48 GDRPSLSLQNRLDVALE----YLYSHPEVKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDE 103
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I +E QS +T++N +FS + K+ ++VS+ YHL R+++ + G+ +A +
Sbjct: 104 RRILIEDQSTNTYENVKFSIDL---YDVKHAVVVSNTYHLYRTKIIAKRLGMKMEALAA- 159
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ I Y ++EY+ I+
Sbjct: 160 -----ETPIRSKRKMY-----VREYVAIM 178
>gi|21673458|ref|NP_661523.1| hypothetical protein CT0624 [Chlorobium tepidum TLS]
gi|21646562|gb|AAM71865.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 257
Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 93/243 (38%), Gaps = 23/243 (9%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
I L+++ LL + ++ + + ++ L+ + + R + + +
Sbjct: 16 GICLLLAIAGLLFKRRSLVWISLALL---WALSLPVVGQALMHRTEEPWHR--VPVEQVR 70
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ IV+L I P ++ R + L+K+ K ++ +GG
Sbjct: 71 KADAIVVLSGMLQQIHGAPLGEF---GEAADRFESGIDLFKAGK----APVLVFTGGQMP 123
Query: 125 KHG--LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--NMQGKNIILVS 180
+ E + + GV I+L + +T A ++ ++ + K IILV+
Sbjct: 124 WDPDCVPEGELLAARARLRGVPAGSIRLTSTVANTAGEALATALLLGVSPGKPKRIILVT 183
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDY-------LNAYYSIIPLSANFYLTELALKEYIGI 233
SA+H++R+ + F G + D+ IP + + AL+E IG
Sbjct: 184 SAFHMQRALMLFMAAGFEVEPCPVDFWATDLKSRTTLLDFIPSANAMNDSATALREMIGQ 243
Query: 234 LIA 236
++
Sbjct: 244 IVY 246
>gi|308179164|ref|YP_003918570.1| hypothetical protein AARI_34120 [Arthrobacter arilaitensis Re117]
gi|307746627|emb|CBT77599.1| conserved hypothetical membrane protein [Arthrobacter arilaitensis
Re117]
Length = 342
Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 92/233 (39%), Gaps = 28/233 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ L V L+ + ++ F+ + S + +LL Y
Sbjct: 107 LAVFALPVIAVLLIRIESWWTYALAFFLFMASLFTASLFAMLLL------YAWVHGRFPS 160
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K D +V+LG T P +R R+ + + L QHS ++ +GG
Sbjct: 161 KADSAAVVVLGARTIKGKVTPLLR--------GRLDKGIEL--QQLQHSPRPFMVPTGGQ 210
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSS 181
E + L E G++ I +E ++ DT +N +FS+++I+ + + LV+S
Sbjct: 211 GHDEVEPEGVSMAKYLQEQGIDEAQILIEDRAKDTMENLRFSNALIREQRPDGQLWLVTS 270
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
YH R + + G++ +A +A +Y L+E + I+
Sbjct: 271 DYHALRVAMASRQLGLDARAFGG-----------KTAAYYRPSAFLRECVAIV 312
>gi|88861294|ref|ZP_01135925.1| hypothetical protein PTD2_22487 [Pseudoalteromonas tunicata D2]
gi|88816673|gb|EAR26497.1| hypothetical protein PTD2_22487 [Pseudoalteromonas tunicata D2]
Length = 250
Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 81/204 (39%), Gaps = 17/204 (8%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
I ++++ + SY + + +V+LG + PA + S +R
Sbjct: 54 STPFISNLIIEKKEASYS--AFNSNKHPVIHYVVVLGCKIMPNKSRPANS-QLGHCSLAR 110
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
++E +RL K +++SGG G++ S + + G + I L ++ D
Sbjct: 111 LYEGLRLAKLY----PSAKLVVSGG--GFKGVSNSEIMRQAAIAIGFDPQRILLNPKARD 164
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYY 211
T + A + + + + LV+S H++R+ F G++ A+ +D+ +
Sbjct: 165 TAEEALLLAPKLVDN---QVALVTSIAHMQRAVELFNQQGVDVIAAPTDWQEMPMNPLWR 221
Query: 212 SIIPLSANFYLTELALKEYIGILI 235
+P E+IG L
Sbjct: 222 QFVPTPEALMALTEHQHEWIGNLW 245
>gi|227544579|ref|ZP_03974628.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A]
gi|300910291|ref|ZP_07127751.1| conserved hypothetical protein [Lactobacillus reuteri SD2112]
gi|227185458|gb|EEI65529.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A]
gi|300892939|gb|EFK86299.1| conserved hypothetical protein [Lactobacillus reuteri SD2112]
Length = 271
Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 25/168 (14%)
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG P + +R+ + + +C + II+SGG QK +E
Sbjct: 111 VLGAAVKHGQVPPVL--------ATRLDKAI----NCWKTHQSAKIIVSGGIVQKAKESE 158
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ V L+ G+ I E ++L+T+QN F+S +IK + +++V+S +H+ R++
Sbjct: 159 AEVMAAYLIAHGIPARKIIRENKALNTWQNLAFASQLIKPQ--ETVVVVTSDFHVLRARA 216
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
Y + G+N + I + Y +++Y+GI+ ++
Sbjct: 217 YARKMGLN-----------WSFISSKTPWRYCPLTFIRDYLGIIRDHW 253
>gi|293401028|ref|ZP_06645173.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306054|gb|EFE47298.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 261
Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 86/221 (38%), Gaps = 35/221 (15%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ L +R+I ++ +++ F+G IL + K+ G ++
Sbjct: 63 IFSYLPIPLRRIVYLCTTIIIILFLGLQ--SCILYQG----------MHTDKQQGEAAII 110
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG S R+ ++ + +I+SGG Q +E+
Sbjct: 111 LGA--------QLHGSSISRLLRYRLERGIQFAEEYPNTY----LIVSGGKGQAETCSEA 158
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L++ GV I +E S++T +N FS +++ K+ ++++ +H+ R+
Sbjct: 159 SAMKQYLIQHGVAESRILMEDASMNTQENLAFSKVLMEKYHIKSASIITNDFHMFRAGFI 218
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
G++ + S + L+ NFY +E++G
Sbjct: 219 ATSLGLSYHNYPA------RSDLDLAPNFY-----FREFLG 248
>gi|257421586|ref|ZP_05598576.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|257163410|gb|EEU93370.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|315156481|gb|EFU00498.1| conserved hypothetical protein [Enterococcus faecalis TX0043]
Length = 193
Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAI----PYIKQHPETPVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S ++ K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKLL---SFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
S +H+ RSQL + GI+ + +
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGIT 166
>gi|145588430|ref|YP_001155027.1| hypothetical protein Pnuc_0242 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046836|gb|ABP33463.1| protein of unknown function DUF218 [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 272
Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 46/222 (20%), Positives = 86/222 (38%), Gaps = 19/222 (8%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
+GW + L+ L+ + + LS D I++LG P S
Sbjct: 54 IVGWLPSSEVFLRALENAVPKTNLSQIADSDIGGIIILGGAIQSGMIGLDRGEVPLQSSA 113
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISG--GDPQKHGLAESIVYNNKLLESGVERDD---IK 149
R+ + + L + + I SG G GL+E+ + + E G+ ++
Sbjct: 114 ERVTKALELIRKY----PNLPFIFSGYSGRLNPKGLSEADAFKQLIAEQGLSQETEKTAH 169
Query: 150 LETQSLDTFQNAQFSSSMIKNMQ-------GKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
E QS +T++N + M+++ + +L++SA H+ R++ FQ GI
Sbjct: 170 YENQSRNTYENVLYLRPMMQDFGARSESGAIQPWLLITSASHMYRAEKIFQMQGIEVIPV 229
Query: 203 CSDYLNA---YYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
DY A ++ L + E +G+L + G
Sbjct: 230 PVDYQTANSLNWTSFDLEDGTQNWHKLVHEVVGLLAYWITGK 271
>gi|307289790|ref|ZP_07569727.1| hypothetical protein HMPREF9509_00109 [Enterococcus faecalis
TX0411]
gi|306499175|gb|EFM68653.1| hypothetical protein HMPREF9509_00109 [Enterococcus faecalis
TX0411]
Length = 193
Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAI----PYIKQHPETPVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S ++ K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKLL---SFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
S +H+ RSQL + GI+ + +
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGIT 166
>gi|315151722|gb|EFT95738.1| conserved hypothetical protein [Enterococcus faecalis TX0012]
Length = 193
Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKENALPSRVLQARLDVAI----PYIKQHPETPVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S ++ K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKLL---SFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
S +H+ RSQL + GI+ + +
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGIT 166
>gi|229102877|ref|ZP_04233571.1| hypothetical protein bcere0019_20290 [Bacillus cereus Rock3-28]
gi|228680550|gb|EEL34733.1| hypothetical protein bcere0019_20290 [Bacillus cereus Rock3-28]
Length = 166
Score = 111 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 69/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 19 YVLILGA--------KLFGDRPSLSLQNRLDVALE----YLFSHPEAKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ L+ G++ I +E +S +T++N +FS + K+ ++VS+ YHL R
Sbjct: 67 IPEAHSMRIYLMVHGIDESRILMEDRSTNTYENLKFSMDLFD---VKHAVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + GI +A + + + Y ++EY I+
Sbjct: 124 TKIIARRLGIKMEALAA------ETPMRSKRKMY-----VREYAAIM 159
>gi|317506557|ref|ZP_07964352.1| DUF218 domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
gi|316255154|gb|EFV14429.1| DUF218 domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
Length = 330
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 71/142 (50%), Gaps = 15/142 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV LG G T+P + + R+ +T+ + ++ I+++G
Sbjct: 161 ELRGASTTIVALGAGLHPDGTMPQVLV-------DRLRKTLEVAQA----DPAAPIVVTG 209
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G PQ +G+ E+ + L+ GV+ I E S T QNA S+ ++++++ ++++V+
Sbjct: 210 GKPQ-NGVTEADAMADWLVGQGVDPGRIHKEDHSASTVQNALNSAEILRSLRPAHLVIVT 268
Query: 181 SAYHLKRSQLYFQHFGINTKAS 202
SA H++R+ F+ + +
Sbjct: 269 SANHVRRASALFE---LAAQPV 287
>gi|256763425|ref|ZP_05504005.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|257417033|ref|ZP_05594027.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
gi|256684676|gb|EEU24371.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|257158861|gb|EEU88821.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
gi|295113736|emb|CBL32373.1| Uncharacterized conserved protein [Enterococcus sp. 7L76]
gi|315145741|gb|EFT89757.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
Length = 193
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAI----PYIKKHPETPVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S ++ K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKLL---SFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
S +H+ RSQL + GI+ + +
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGIT 166
>gi|260101912|ref|ZP_05752149.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|260084275|gb|EEW68395.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
Length = 367
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 92/242 (38%), Gaps = 25/242 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ ++ LI+S L ++S + I + +L L +
Sbjct: 116 LIFGFVALILSLMFLFGSGQYLPRWLSVLLASIPAIAI-YLGLVLYNFLINLLLYQIYPR 174
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIIS 119
++K+ + +++LG G + S +RI ++ + ++ II+S
Sbjct: 175 RYKQ--DYLIVLGAGLINGDRV-------SKLLAARINRAIQYSNRQYQKGRKRPIIIMS 225
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NI 176
G + E++ + G++ + + +E +S +T+QN FS + G
Sbjct: 226 GSQGPDEKIPEAVAMAKFARKRGIKTNHLLIEDKSKNTYQNMLFSKRLATKDFGSSNFRS 285
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
S+ YH+ R+ L + G+ + + +YL ++E+ G+ I
Sbjct: 286 TFFSNNYHIFRAALLAKEVGLKANGVGA-----------FTRLYYLPNAIIREFAGVFIM 334
Query: 237 YY 238
+
Sbjct: 335 HK 336
>gi|42781376|ref|NP_978623.1| hypothetical protein BCE_2312 [Bacillus cereus ATCC 10987]
gi|229196506|ref|ZP_04323250.1| hypothetical protein bcere0001_20640 [Bacillus cereus m1293]
gi|42737298|gb|AAS41231.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
gi|228586862|gb|EEK44936.1| hypothetical protein bcere0001_20640 [Bacillus cereus m1293]
Length = 185
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS +R+ + +I+SGG +
Sbjct: 38 YVLILGA--------KLFGDRPSLSLQNRLDVALE----YLVSHPEAKVIVSGGQGEDED 85
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E QS +T++N +FS + K+ ++VS+ YHL R
Sbjct: 86 IPEAHSMRNYLMVHGIDESRILIEDQSTNTYENLKFSIDL---YDVKHAVVVSNTYHLYR 142
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + G+ +A + + + Y ++EY I+
Sbjct: 143 TKIIAKRLGMRMEALAA------ETPMRSKRKMY-----VREYAAIM 178
>gi|29377330|ref|NP_816484.1| hypothetical protein EF2862 [Enterococcus faecalis V583]
gi|227554286|ref|ZP_03984333.1| conserved hypothetical protein [Enterococcus faecalis HH22]
gi|229549029|ref|ZP_04437754.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200]
gi|255974796|ref|ZP_05425382.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|256960950|ref|ZP_05565121.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256963911|ref|ZP_05568082.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|257079971|ref|ZP_05574332.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|257081584|ref|ZP_05575945.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|257087767|ref|ZP_05582128.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|257091087|ref|ZP_05585448.1| conserved hypothetical protein [Enterococcus faecalis CH188]
gi|293382461|ref|ZP_06628396.1| conserved hypothetical protein [Enterococcus faecalis R712]
gi|293387155|ref|ZP_06631716.1| conserved hypothetical protein [Enterococcus faecalis S613]
gi|294779524|ref|ZP_06744919.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
gi|307268328|ref|ZP_07549709.1| hypothetical protein HMPREF9498_00468 [Enterococcus faecalis
TX4248]
gi|307272101|ref|ZP_07553364.1| hypothetical protein HMPREF9514_00848 [Enterococcus faecalis
TX0855]
gi|307280587|ref|ZP_07561635.1| hypothetical protein HMPREF9515_01629 [Enterococcus faecalis
TX0860]
gi|307286850|ref|ZP_07566932.1| hypothetical protein HMPREF9505_00382 [Enterococcus faecalis
TX0109]
gi|312901401|ref|ZP_07760678.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|312904386|ref|ZP_07763547.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|312906516|ref|ZP_07765518.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|312910460|ref|ZP_07769306.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|29344797|gb|AAO82554.1| conserved hypothetical protein [Enterococcus faecalis V583]
gi|227176576|gb|EEI57548.1| conserved hypothetical protein [Enterococcus faecalis HH22]
gi|229305822|gb|EEN71818.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200]
gi|255967668|gb|EET98290.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|256951446|gb|EEU68078.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256954407|gb|EEU71039.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|256988001|gb|EEU75303.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|256989614|gb|EEU76916.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|256995797|gb|EEU83099.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|256999899|gb|EEU86419.1| conserved hypothetical protein [Enterococcus faecalis CH188]
gi|291080145|gb|EFE17509.1| conserved hypothetical protein [Enterococcus faecalis R712]
gi|291083426|gb|EFE20389.1| conserved hypothetical protein [Enterococcus faecalis S613]
gi|294453403|gb|EFG21810.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
gi|306502065|gb|EFM71351.1| hypothetical protein HMPREF9505_00382 [Enterococcus faecalis
TX0109]
gi|306503953|gb|EFM73170.1| hypothetical protein HMPREF9515_01629 [Enterococcus faecalis
TX0860]
gi|306511217|gb|EFM80224.1| hypothetical protein HMPREF9514_00848 [Enterococcus faecalis
TX0855]
gi|306515354|gb|EFM83888.1| hypothetical protein HMPREF9498_00468 [Enterococcus faecalis
TX4248]
gi|310627459|gb|EFQ10742.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|310632285|gb|EFQ15568.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|311289232|gb|EFQ67788.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|311291477|gb|EFQ70033.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|315026569|gb|EFT38501.1| conserved hypothetical protein [Enterococcus faecalis TX2137]
gi|315148855|gb|EFT92871.1| conserved hypothetical protein [Enterococcus faecalis TX4244]
gi|315162808|gb|EFU06825.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
gi|315166292|gb|EFU10309.1| conserved hypothetical protein [Enterococcus faecalis TX1302]
gi|315169149|gb|EFU13166.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
gi|315171876|gb|EFU15893.1| conserved hypothetical protein [Enterococcus faecalis TX1342]
gi|315575243|gb|EFU87434.1| conserved hypothetical protein [Enterococcus faecalis TX0309B]
gi|315576853|gb|EFU89044.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
gi|315582397|gb|EFU94588.1| conserved hypothetical protein [Enterococcus faecalis TX0309A]
gi|327536019|gb|AEA94853.1| hypothetical protein OG1RF_12166 [Enterococcus faecalis OG1RF]
gi|329577167|gb|EGG58637.1| hypothetical protein HMPREF9520_00991 [Enterococcus faecalis
TX1467]
Length = 193
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAI----PYIKQHPETPVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S ++ K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKLL---SFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
S +H+ RSQL + GI+ + +
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGIT 166
>gi|315173909|gb|EFU17926.1| conserved hypothetical protein [Enterococcus faecalis TX1346]
Length = 193
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 10/144 (6%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG T + PS +R+ + + +I+SG
Sbjct: 33 QPTDKPDAILILG---TRVLGTSKETALPSRVLQARLDVAI----PYIKQHPETPVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S ++ K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKLL---SFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
S +H+ RSQL + GI+ + +
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGIT 166
>gi|167757485|ref|ZP_02429612.1| hypothetical protein CLORAM_03035 [Clostridium ramosum DSM 1402]
gi|237735048|ref|ZP_04565529.1| membrane-spanning protein [Mollicutes bacterium D7]
gi|167702482|gb|EDS17061.1| hypothetical protein CLORAM_03035 [Clostridium ramosum DSM 1402]
gi|229381824|gb|EEO31915.1| membrane-spanning protein [Coprobacillus sp. D7]
Length = 351
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 50/243 (20%), Positives = 96/243 (39%), Gaps = 27/243 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ I L+++ L + + M+ + L I + L ++ L P
Sbjct: 107 LVAVGIILLITLSSFLGRINPPLPIMALWSGLIVMILFLTFHIFL--FIETLILTNLFHP 164
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT-IIIS 119
+ K+ N I++LG+G P + RI ++ K ++ +++S
Sbjct: 165 R--KNLNYIIVLGSGLINGNVSPLL--------AKRIQAALKFAKKQEKKKGFAPYLLMS 214
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM---QGKNI 176
GG AE++ +E G + I E +S +T +N QFS ++++ +
Sbjct: 215 GGQGSDETRAEALAMKEYAIEQGYSEELIITEEKSKNTLENMQFSKAVMEEKSHGENYKC 274
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
SS+YHL R+ +Y + G+ +A +YL L+EYI L
Sbjct: 275 AYASSSYHLMRAGIYARQVGLIMSGLGG-----------KTAFYYLANAVLREYIAYLAM 323
Query: 237 YYR 239
+
Sbjct: 324 NKK 326
>gi|332969923|gb|EGK08925.1| protein of hypothetical function DUF218 [Desmospora sp. 8437]
Length = 189
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 88/210 (41%), Gaps = 29/210 (13%)
Query: 30 MLLFSFIGWGIIPTI--LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
L+ +G GI + LL S+ L P ++ ++LG PA++
Sbjct: 4 WLIAIAMGAGIAGSFGCLLWIRVSSFDGKRLLPIPRQGA---IVLGTALEDHRPSPALQ- 59
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
R+ + ++LY+ + +I+SGG P+ E+ V L+E GV + D
Sbjct: 60 -------ERMDQALKLYQ----RGLAPILILSGGSPRGTT-PEARVMKEYLVERGVRKRD 107
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
+ LE +S +T +N S ++ + +++ LV+ +H+ R+ + ++ +
Sbjct: 108 LILEDRSTNTAENLVRSGELLLSHGIRDVYLVTHDFHMYRALRCARRAQLSVTPAPV--- 164
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ + ++ +E + ++ Y
Sbjct: 165 --------ATRSLWIPYHKARECLALVKDY 186
>gi|260551279|ref|ZP_05825481.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
gi|260405736|gb|EEW99226.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
Length = 376
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 45/194 (23%), Positives = 78/194 (40%), Gaps = 21/194 (10%)
Query: 52 SYQRPLLSPQWKKDGN---IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
Y R P K IV+LG G T+ I + + R+ +T+ + K
Sbjct: 193 EYVRKNPLPTQPKKLTEPYAIVVLGGGLTLDKN--GKDIVVNSYTRLRLEKTLEVEKQN- 249
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
H I++SG E+ L + GV+ LE +S++T +N +FSS ++
Sbjct: 250 ----HLPIVLSG--------VEAPYMQAWLKKRGVDAK--LLEQRSMNTCENTRFSSLLL 295
Query: 169 KNMQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ G ++LV+ YH+ R++ F GI T + P N+ + A
Sbjct: 296 QKKGGAPTVMLVTDEYHMPRTRRLFALNGIETIPVIAPMPTPLTRWQPSIQNYDHSRRAN 355
Query: 228 KEYIGILIAYYRGN 241
E + + G+
Sbjct: 356 YELLATIRDMLFGS 369
>gi|256616694|ref|ZP_05473540.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256596221|gb|EEU15397.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|315033112|gb|EFT45044.1| conserved hypothetical protein [Enterococcus faecalis TX0017]
Length = 193
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAI----PYIKKHPETPVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S ++ K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKLL---SFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
S +H+ RSQL + GI+ + +
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGIT 166
>gi|262204353|ref|YP_003275561.1| hypothetical protein Gbro_4535 [Gordonia bronchialis DSM 43247]
gi|262087700|gb|ACY23668.1| protein of unknown function DUF218 [Gordonia bronchialis DSM 43247]
Length = 334
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 12/162 (7%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
P +P+ IV+LG G + + + +R KS + +
Sbjct: 129 PDTTPKNVSGRPTIVILGYGLGAD-----------GKMAAELINRVRAGKSQAELTTSAP 177
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I++SGG P+K G+ E+ L+++GV+ I E +S T NAQ +++++ ++
Sbjct: 178 IVVSGGVPKK-GITEASAMQKWLVDNGVDASRITTEDKSGSTVANAQNTAAILAGKGVRD 236
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
IILV+S H++R+ F G+ AS + + PL+
Sbjct: 237 IILVTSPSHIRRAAADFAATGLRVVASVTTGTDLSRYATPLT 278
>gi|297180867|gb|ADI17072.1| uncharacterized conserved protein [uncultured alpha proteobacterium
HF0010_30A23]
Length = 273
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/235 (17%), Positives = 89/235 (37%), Gaps = 16/235 (6%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
H + + + + LF + + + LL+ L+ + + + +I+ L
Sbjct: 35 IHAWSGKLVQFLALGAVLALF----FLPLGSRLLEPLENRFPAYRFQSEAGRLDGVII-L 89
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH---GLA 129
G + ++ + + + RI + + + + ++GGD +
Sbjct: 90 GGAVDLRASMDSAALIQVGSASDRILTAIEVLAQS-----NLDLYLTGGDGALTRRVEVG 144
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E+ + L + G + I++E+QS +T ++ Q +Q LV+SA+H+ R+
Sbjct: 145 EAALVAEWLGQQGFDSGRIRVESQSRNTAEHPQALLEEFPELQTGLYGLVTSAFHMPRAV 204
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTEL---ALKEYIGILIAYYRGN 241
F+ GI DY + I E A +E+ G+ + G
Sbjct: 205 GVFRKSGIAVVPIPVDYRSDRGRAIVFGQGIVEWERFALAAREWGGLFFYFALGR 259
>gi|257084233|ref|ZP_05578594.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
gi|256992263|gb|EEU79565.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
Length = 193
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAI----PYIKQHPETPVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S ++ K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSEKLL---SFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
S +H+ RSQL + GI+ + +
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGIT 166
>gi|229074933|ref|ZP_04207940.1| hypothetical protein bcere0024_19940 [Bacillus cereus Rock4-18]
gi|228708161|gb|EEL60327.1| hypothetical protein bcere0024_19940 [Bacillus cereus Rock4-18]
Length = 166
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 69/167 (41%), Gaps = 26/167 (15%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG P +R+ + +I+SGG +
Sbjct: 19 YVLILGA--------KLFGDRPFLSLQNRLDVALE----YLYSHPEVKVIVSGGQGEDED 66
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N L+ G++ I +E +S +T++N +FS + K+ ++VS+ YHL R
Sbjct: 67 IPEAHSMRNYLMVHGIDESRILMEDRSTNTYENLKFSMDLFD---VKHAVVVSNTYHLYR 123
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+++ + GI +A + + + Y ++EY I+
Sbjct: 124 TKIIARRLGIKMEALAA------ETPMRSKRKMY-----VREYAAIM 159
>gi|257420188|ref|ZP_05597182.1| conserved hypothetical protein [Enterococcus faecalis T11]
gi|257162016|gb|EEU91976.1| conserved hypothetical protein [Enterococcus faecalis T11]
Length = 193
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAI----PYIKQHSETPVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S ++ K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKLL---SFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
S +H+ RSQL + GI+ + +
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGIT 166
>gi|306823505|ref|ZP_07456880.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
gi|304553212|gb|EFM41124.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
Length = 348
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/238 (19%), Positives = 93/238 (39%), Gaps = 25/238 (10%)
Query: 1 MLLSW-IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL-L 58
+ +W I L++S + L + + ++ + +F+ + I + + +
Sbjct: 102 LPFAWGIMLLLSGYWFLWGPGQGMSGSEFYVRVMTFVSMM-VNYIPIALFGVWFSNDICY 160
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ I++LG T+ + R+ + ++ TII
Sbjct: 161 KSGKTPETEYIIVLGCSILDDGTVTPL-------LRGRLDAAIAAWEQG---GRRATIIT 210
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNII 177
SGG ++ES N LL GV I LE +S T +N +FS +++ G +
Sbjct: 211 SGGQGHDEVISESRAMANYLLSQGVPESSILLEDKSSTTEENLKFSHAIMDARGGAAHCT 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +S+YH R+ ++ + GIN +A F+ +EYI +++
Sbjct: 271 IATSSYHCLRAAMFARRLGINASCVGGH-----------TAAFFYPAAFFREYIALIM 317
>gi|47565636|ref|ZP_00236676.1| hypothetical protein cytosolic protein [Bacillus cereus G9241]
gi|47557272|gb|EAL15600.1| hypothetical protein cytosolic protein [Bacillus cereus G9241]
Length = 185
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 84/202 (41%), Gaps = 27/202 (13%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
+ F+ ++P I + ++ F + + + +++LG PS
Sbjct: 4 WIFLIILLLPPIYIIYMTFRMNK-VAREKLSYHSPYVLILGA--------KLFGDRPSLS 54
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
+R+ + +I+SGG + + E+ N L+ G++ I +E
Sbjct: 55 LQNRLDVALE----YLVSHPTAKVIVSGGQGEDEDIPEAHSMRNYLMARGIDESRILIED 110
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
QS +T++N +FS + K+ ++VS+ YHL R+++ + G+ +A + +
Sbjct: 111 QSTNTYENVKFSMDL---YDVKHAVVVSNTYHLYRTKIIAKRLGLKMEALAA------ET 161
Query: 213 IIPLSANFYLTELALKEYIGIL 234
+ Y ++EY I+
Sbjct: 162 PMRSKRKMY-----VREYAAIM 178
>gi|223982522|ref|ZP_03632760.1| hypothetical protein HOLDEFILI_00034 [Holdemania filiformis DSM
12042]
gi|223965497|gb|EEF69771.1| hypothetical protein HOLDEFILI_00034 [Holdemania filiformis DSM
12042]
Length = 246
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 87/221 (39%), Gaps = 35/221 (15%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ +M +L+ I + + + G +++LG
Sbjct: 55 GKRWMNGIWMISGVLVLILISFMVNAA------------NTHISASQDQGTTVIVLGAKI 102
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+PS R+ + + CT+I++GG AES + N
Sbjct: 103 NAD--------QPSLILERRLQAAL----DYANENPECTVIVTGGQGNGEDYAESTIMKN 150
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHLKRSQLYFQHF 195
L+E+G+E + I E Q+ +T +N ++S +++ +N+++V+ ++H R+ + +
Sbjct: 151 WLVENGLETNRILEENQARNTGENLKYSLKLLRQNNLSENVVIVTDSFHQLRASILAKQL 210
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
GI ++ + + + ++E+ G++ A
Sbjct: 211 GIEQISAVNS----------KTPVLLIPMYTVREWFGLVKA 241
>gi|164688115|ref|ZP_02212143.1| hypothetical protein CLOBAR_01760 [Clostridium bartlettii DSM
16795]
gi|164602528|gb|EDQ95993.1| hypothetical protein CLOBAR_01760 [Clostridium bartlettii DSM
16795]
Length = 249
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 92/228 (40%), Gaps = 22/228 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFM--LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
++ ++FLI+ + I+K C + ++ I +I IL++ + Y +
Sbjct: 27 LMFKYLFLILGLLCFIYHFIKKYLNKKCTLYKIVKGVICCVLIIFILVESIMVLYPK--- 83
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ I++LG + + S R+ + + II+
Sbjct: 84 -HDLDTKCDYIIVLGA--------LVNKNKISQSLKERLDSCVEY---LYLTHDNPKIIV 131
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---- 174
SGG + ++E+ + LL G++ +I +E +S T +N FS +I+ K
Sbjct: 132 SGGQGRGENISEASAMKSYLLSKGIDEKNIIMEDKSRTTKENFCFSKKIIEGDSHKKIEN 191
Query: 175 -NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFY 221
NI ++++ +H RS++ + G + N I+ + F+
Sbjct: 192 LNIKVITTDFHTLRSKIISKRVGYANTTFYTSSSNGALFILNYTREFF 239
>gi|309802755|ref|ZP_07696859.1| putative membrane protein [Bifidobacterium dentium JCVIHMP022]
gi|308220819|gb|EFO77127.1| putative membrane protein [Bifidobacterium dentium JCVIHMP022]
Length = 346
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/238 (19%), Positives = 93/238 (39%), Gaps = 25/238 (10%)
Query: 1 MLLSW-IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL-L 58
+ +W I L++S + L + + ++ + +F+ + I + + +
Sbjct: 100 LPFAWGIMLLLSGYWFLWGPGQGMSGSEFYVRVMTFVSMM-VNYIPIALFGVWFSNDICY 158
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ I++LG T+ + R+ + ++ TII
Sbjct: 159 KSGKTPETEYIIVLGCSILDDGTVTPL-------LRGRLDAAIAAWEQG---GRRATIIT 208
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNII 177
SGG ++ES N LL GV I LE +S T +N +FS +++ G +
Sbjct: 209 SGGQGHDEVISESRAMANYLLSQGVPESSILLEDKSSTTEENLKFSHAIMDARGGAAHCT 268
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +S+YH R+ ++ + GIN +A F+ +EYI +++
Sbjct: 269 IATSSYHCLRAAMFARRLGINASCVGGH-----------TAAFFYPAAFFREYIALIM 315
>gi|218897246|ref|YP_002445657.1| hypothetical protein BCG9842_B3064 [Bacillus cereus G9842]
gi|228939435|ref|ZP_04102023.1| hypothetical protein bthur0008_20940 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228965253|ref|ZP_04126347.1| hypothetical protein bthur0004_20910 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228972289|ref|ZP_04132901.1| hypothetical protein bthur0003_20630 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228978903|ref|ZP_04139269.1| hypothetical protein bthur0002_21040 [Bacillus thuringiensis Bt407]
gi|218541132|gb|ACK93526.1| conserved hypothetical protein [Bacillus cereus G9842]
gi|228780777|gb|EEM28989.1| hypothetical protein bthur0002_21040 [Bacillus thuringiensis Bt407]
gi|228787434|gb|EEM35401.1| hypothetical protein bthur0003_20630 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228794487|gb|EEM41999.1| hypothetical protein bthur0004_20910 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228820135|gb|EEM66172.1| hypothetical protein bthur0008_20940 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 178
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
PS +R+ + +I+SGG + + E+ N L+ G++
Sbjct: 43 RPSLSLQNRLDVALE----YLFSHPEAKVIVSGGQGEDEDIPEAHSMRNYLMVHGIDESR 98
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I +E QS +T++N +FS + K+ ++VS+ YHL R+++ + G+ +A +
Sbjct: 99 ILIEDQSTNTYENLKFSMDL---YNVKHAVVVSNTYHLYRTKIIAKRLGMKMEALAA--- 152
Query: 208 NAYYSIIPLSANFYLTELALKEYIGIL 234
+ I Y ++EY I+
Sbjct: 153 ---ETPIRSKRKMY-----VREYAAIM 171
>gi|300860463|ref|ZP_07106550.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|307276161|ref|ZP_07557292.1| hypothetical protein HMPREF9521_01790 [Enterococcus faecalis
TX2134]
gi|300849502|gb|EFK77252.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|306507155|gb|EFM76294.1| hypothetical protein HMPREF9521_01790 [Enterococcus faecalis
TX2134]
Length = 193
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAI----PYIKQHPETPVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S ++ K +++V+
Sbjct: 86 GQGANEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKLL---SFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
S +H+ RSQL + GI+ + +
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGIT 166
>gi|328950417|ref|YP_004367752.1| protein of unknown function DUF218 [Marinithermus hydrothermalis
DSM 14884]
gi|328450741|gb|AEB11642.1| protein of unknown function DUF218 [Marinithermus hydrothermalis
DSM 14884]
Length = 190
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 15/139 (10%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ IV+LG PS +R+ + LY+ TI+++GG
Sbjct: 23 ADAIVVLGA--------AQYNGHPSPIFANRLNAALALYRQ----GYAPTILVTGGKQPG 70
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+E V L +GV RD + ET+S T++N + + +++ +++V+ A HL
Sbjct: 71 DRYSEGEVGCRYLEAAGVPRDALICETRSRSTWENLKNARALL---GPARVLIVTDAPHL 127
Query: 186 KRSQLYFQHFGINTKASCS 204
R+ + Q I+
Sbjct: 128 PRAMMLAQRLNIDAGGYPV 146
>gi|294650259|ref|ZP_06727628.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292823851|gb|EFF82685.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 373
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN-----------IIVLLGNGTTIIPTIP 83
F+ IP + + + + LL + K + IV+LG G T+
Sbjct: 165 FLDTYPIPLPIDEESESLLSKDLLESKKNKQDDRGDLKDTNQPYAIVVLGGGLTL--GAN 222
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
I + + R+ T+ + K + I++SG E+ L E G+
Sbjct: 223 GKDIVVNNYTRLRLERTLEVEKQY-----NLPIVLSG--------VEAPYMQAWLEERGI 269
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ LE +S++T +N +FSS +++ G +IL++ YH+ R++ F GI T
Sbjct: 270 KAK--LLENRSMNTCENTRFSSLLLQKKGGAPKVILITDEYHMPRTRRLFALNGIETVPV 327
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ S P N+ + A E + + G+
Sbjct: 328 VAPMPTKLTSWRPSEKNYDHSRRANYELLATIRDVLFGS 366
>gi|89900349|ref|YP_522820.1| hypothetical protein Rfer_1557 [Rhodoferax ferrireducens T118]
gi|89345086|gb|ABD69289.1| protein of unknown function DUF218 [Rhodoferax ferrireducens T118]
Length = 249
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 65/174 (37%), Gaps = 12/174 (6%)
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG--DPQKHGLAES 131
+G + + R F M LY + K ++ +GG Q E
Sbjct: 79 SGMMVNIPGKQGGAPEWGDAVDRFFGGMELYAAGK----APRLVFTGGLLPWQGEQEPEG 134
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
V L GV + + + + +T Q + ++ + I+LV+SA+H+ R+Q
Sbjct: 135 QVLRRMALRFGVPANAVVVSGPAQNTEQESAAVRQLLGP-GVRRIVLVTSAFHMPRAQRL 193
Query: 192 FQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
F+ G D+ +P ++ T++A++E +G R
Sbjct: 194 FEQAGFVVTPYPVDFRVTVRGTTPMDYLPEASALERTDIAVRELLGRGYYALRA 247
>gi|284802880|ref|YP_003414745.1| hypothetical protein LM5578_2637 [Listeria monocytogenes 08-5578]
gi|284996021|ref|YP_003417789.1| hypothetical protein LM5923_2586 [Listeria monocytogenes 08-5923]
gi|284058442|gb|ADB69383.1| hypothetical protein LM5578_2637 [Listeria monocytogenes 08-5578]
gi|284061488|gb|ADB72427.1| hypothetical protein LM5923_2586 [Listeria monocytogenes 08-5923]
Length = 189
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 70/177 (39%), Gaps = 24/177 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG P + PS R+ + + +I+SG
Sbjct: 33 KPSENADTVLILGAKVKGNPAV------PSLVLQERLDAAV----AYLNEYPKAKVIVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V L+ G+ R I+ ET+S T +N ++S++ ++V+
Sbjct: 83 GQGADESATEASVMEEYLVNEGIARKRIETETKSKRTEENIKYSNA---KFNLGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
S YH+ R + + GI+ + S F + ++E + I A+
Sbjct: 140 SDYHMYRGLMLAKRQGIDASGLPA-----------TSQTFAKYKGMMREVLSITYAW 185
>gi|325267121|ref|ZP_08133790.1| protein of hypothetical function DUF218 [Kingella denitrificans
ATCC 33394]
gi|324981474|gb|EGC17117.1| protein of hypothetical function DUF218 [Kingella denitrificans
ATCC 33394]
Length = 213
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 73/188 (38%), Gaps = 20/188 (10%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
+ + +P + V+LG A PS RI + LY++
Sbjct: 34 YRFSQPKND---LPQADAAVVLGA--------AAWGNRPSPVFRERINHALTLYQTGYVR 82
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+I +GG P+ E+ V N L+ G+ DI +E +S DT+QN + +++
Sbjct: 83 ----KLIFTGGTPKSGYETEAEVARNFALKQGIPEQDILIEMRSKDTYQNLVNTRFLMQK 138
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+I+++S H+ R+ + I ++Y S ++ ++E
Sbjct: 139 HHLHDIVIISDPLHIARAMAIAEDLDIK-----ANYSPTPTSRYHNASWQTQAAFFIQES 193
Query: 231 IGILIAYY 238
+ I +
Sbjct: 194 YALFIYHL 201
>gi|116873811|ref|YP_850592.1| hypothetical protein lwe2395 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742689|emb|CAK21813.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 189
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 80/207 (38%), Gaps = 28/207 (13%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+ F I G I I++ ++ + + + + +++LG P + PS
Sbjct: 7 IFFILIISGCIYLIIVG----AFMYSGMRAKPVEAADTVLILGAKVEGDPAV------PS 56
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R+ E + + +++SGG E+ V L+ G+ R+ I+
Sbjct: 57 LVLKERLDEAVTYLNDYPKT----KVVVSGGQGADERTTEASVMEEYLVNEGIARNRIET 112
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E +S T +N ++S+ ++VSS YH+ R+ + GI+ +
Sbjct: 113 ENKSKRTEENIKYSNE---KFDLGKTVIVSSDYHMYRALMLANRQGIDVSGLPAKSRTP- 168
Query: 211 YSIIPLSANFYLTELALKEYIGILIAY 237
A + + ++E + I A+
Sbjct: 169 -------AKYKGS---MREVLSITYAW 185
>gi|262370433|ref|ZP_06063759.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262314775|gb|EEY95816.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 370
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
N IV+LG G T+ I + + R+ T+++ + K I++SG
Sbjct: 205 NAIVVLGGGLTLDKNRKDIVVNEYTRL--RLETTLQVEQQFK-----LPIVLSG------ 251
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHL 185
E+ L GV+ LE +S++T +N++FSS +++ G +IL++ YH+
Sbjct: 252 --VEAPYMQRWLKARGVDAK--LLEDRSMNTCENSRFSSLLLQKKGGAPRVILITDQYHM 307
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
R++ F GI T+ + P N+ + A E + + G+
Sbjct: 308 PRTRRLFALNGIETQPIEAPMPTQLTQWRPSEQNYDHSRRANYEMLATIRDVLVGS 363
>gi|171741210|ref|ZP_02917017.1| hypothetical protein BIFDEN_00283 [Bifidobacterium dentium ATCC
27678]
gi|171276824|gb|EDT44485.1| hypothetical protein BIFDEN_00283 [Bifidobacterium dentium ATCC
27678]
Length = 348
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/238 (19%), Positives = 92/238 (38%), Gaps = 25/238 (10%)
Query: 1 MLLSW-IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL-L 58
+ +W I L+ S + L + + ++ + +F+ + I + + +
Sbjct: 102 LPFAWGIMLLFSGYWFLWGPGQGMSGSEFYVRVMTFVSMM-VNYIPIALFGVWFSNDICY 160
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ I++LG T+ + R+ + ++ TII
Sbjct: 161 KSGKAPETEYIIVLGCSILDDGTVTPL-------LRGRLDAAIAAWEQG---GRRATIIT 210
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNII 177
SGG ++ES N LL GV I LE +S T +N +FS +++ G +
Sbjct: 211 SGGQGHDEVISESRAMANYLLSQGVPESSILLEDKSSTTEENLKFSHAIMDARGGAAHCT 270
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +S+YH R+ ++ + GIN +A F+ +EYI +++
Sbjct: 271 IATSSYHCLRAAMFARRLGINASCVGGH-----------TAAFFYPAAFFREYIALIM 317
>gi|262038052|ref|ZP_06011458.1| GdmH [Leptotrichia goodfellowii F0264]
gi|261747919|gb|EEY35352.1| GdmH [Leptotrichia goodfellowii F0264]
Length = 214
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/211 (21%), Positives = 90/211 (42%), Gaps = 30/211 (14%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
FI + P I+++ L S + K + +V+LG +PS
Sbjct: 22 IFIVIFLFPFIIIQLLTIS-EMKKEKDGKDKKVDYVVVLGG--------RVRGEKPSRSL 72
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
Y RI + K + + ++ SGG + ++E+ +L++ G+ + I E +
Sbjct: 73 YKRIEKAAEYLKEHE----NIKVVASGGKGKGEEISEAEAIKRELVKLGISENRIITEDK 128
Query: 154 SLDTFQNAQFSSSMIKNMQGKN------IILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
S++T +N +F+ IK + +N I++V++ YH+ RS+ + G L
Sbjct: 129 SVNTMENFKFTLEKIKENESENKEKKFKILIVTNDYHVYRSRKIAELLGFEAYG-----L 183
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
A +I L ++ ++E I+ Y+
Sbjct: 184 GAKTPLISLPKSY------IRESASIIKYYF 208
>gi|283455426|ref|YP_003359990.1| hypothetical protein BDP_0493 [Bifidobacterium dentium Bd1]
gi|283102060|gb|ADB09166.1| hypothetical protein BDP_0493 [Bifidobacterium dentium Bd1]
Length = 346
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/238 (19%), Positives = 92/238 (38%), Gaps = 25/238 (10%)
Query: 1 MLLSW-IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL-L 58
+ +W I L+ S + L + + ++ + +F+ + I + + +
Sbjct: 100 LPFAWGIMLLFSGYWFLWGPGQGMSGSEFYVRVMTFVSMM-VNYIPIALFGVWFSNDICY 158
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ I++LG T+ + R+ + ++ TII
Sbjct: 159 KSGKAPETEYIIVLGCSILDDGTVTPL-------LRGRLDAAIAAWEQG---GRRATIIT 208
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNII 177
SGG ++ES N LL GV I LE +S T +N +FS +++ G +
Sbjct: 209 SGGQGHDEVISESRAMANYLLSQGVPESSILLEDKSSTTEENLKFSHAIMDARGGAAHCT 268
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +S+YH R+ ++ + GIN +A F+ +EYI +++
Sbjct: 269 IATSSYHCLRAAMFARRLGINASCVGGH-----------TAAFFYPAAFFREYIALIM 315
>gi|228997359|ref|ZP_04156981.1| hypothetical protein bmyco0003_19410 [Bacillus mycoides Rock3-17]
gi|229004990|ref|ZP_04162717.1| hypothetical protein bmyco0002_19350 [Bacillus mycoides Rock1-4]
gi|228756338|gb|EEM05656.1| hypothetical protein bmyco0002_19350 [Bacillus mycoides Rock1-4]
gi|228762451|gb|EEM11376.1| hypothetical protein bmyco0003_19410 [Bacillus mycoides Rock3-17]
Length = 168
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 72/176 (40%), Gaps = 30/176 (17%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +++LG PS +R+ + +I+SG
Sbjct: 14 KLSDNAPYVLILGAKLFGDK--------PSLSLQNRLDVAL----MYLNSHPETKVIVSG 61
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + + E+ N L++ G+E + I +E +S T++N +FS + + ++VS
Sbjct: 62 GQGEDEDIPEAHSMRNYLIKHGIEENRIFIEDRSTSTYENLKFSMDL---YHVMHAVVVS 118
Query: 181 SAYHLKRSQLYFQHFG--INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ YHL R+++ + G + + A+ + + + ++EY I+
Sbjct: 119 NTYHLYRTKIIAKRLGMQMESLAAPTPRRSEKKAY-------------IREYAAII 161
>gi|227496423|ref|ZP_03926709.1| integral membrane protein [Actinomyces urogenitalis DSM 15434]
gi|226834042|gb|EEH66425.1| integral membrane protein [Actinomyces urogenitalis DSM 15434]
Length = 363
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/182 (20%), Positives = 74/182 (40%), Gaps = 20/182 (10%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKS---CKQHSMHCTIIISG 120
+ +V+ G G P + + E R KS + S +++SG
Sbjct: 166 PHPDAVVVHGAGLINGAVTPLLASRITTGVEIWQDEAARRQKSSSDGEAASGRPVLVMSG 225
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN----- 175
G +E+ + GV R+DI LE +S T +N F+ ++ ++ ++
Sbjct: 226 GQGDDEPTSEASAMAEYAVGLGVPREDIVLEDRSTTTRENIAFTRELLADLGARHNVSYD 285
Query: 176 -IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++LV+S+YH R+ + SD ++ +A +Y+ L+EY+ +L
Sbjct: 286 QVLLVTSSYHAVRTAILA-----------SDMETSWAVAPAPTARYYVINAWLREYVAVL 334
Query: 235 IA 236
Sbjct: 335 TY 336
>gi|15672559|ref|NP_266733.1| hypothetical protein L171552 [Lactococcus lactis subsp. lactis
Il1403]
gi|12723467|gb|AAK04675.1|AE006291_9 hypothetical protein L171552 [Lactococcus lactis subsp. lactis
Il1403]
Length = 310
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/251 (16%), Positives = 81/251 (32%), Gaps = 51/251 (20%)
Query: 2 LLSWIFLIVSYWHLLCQSIRK----------------IFFMSCFMLLFSFIGWGI--IPT 43
+L IFL+V + + + + + F LF + IP
Sbjct: 68 ILPLIFLLVCGYFIFNSKTMRTKEGKSATAKLSALFGLNLLIAFPALFMLFTFSTKTIPQ 127
Query: 44 I----------------LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
I L Y +K + I++LG+G P ++
Sbjct: 128 IIWYILLYILLIDIILCFLFAAYILYSWMSQMIPLQKKIDYIIILGSGVRSEEVPPLLK- 186
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
SR+ + + Y+ + ++SGG ++E+ L +
Sbjct: 187 -------SRLDKGIEYYQ----KNPTAKFVVSGGQGADEPVSEAFAMRKYLHSQNIPNHQ 235
Query: 148 IKLETQSLDTFQNAQFSSSMI-----KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
I E + T++N FS +I +II ++ YH+ R LY Q + +
Sbjct: 236 ILFEDKFTTTYENMLFSKRIINEDWSDKEMPPSIIFSTNNYHVLRGSLYAQRVKLKAQGV 295
Query: 203 CSDYLNAYYSI 213
+ + +
Sbjct: 296 GGTHSTLFLTY 306
>gi|262279426|ref|ZP_06057211.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262259777|gb|EEY78510.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 373
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 18/175 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T+ I + + R+ +T+ + K H I++SG
Sbjct: 209 AIVVLGGGLTLDKN--GKDIVVNGYTRLRLEKTLEIEKQS-----HLPIVLSG------- 254
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVSSAYHLK 186
E+ L E GVE LE +S++T +N +FSS +++ G ++LV+ YH+
Sbjct: 255 -VEAPYMQTWLKERGVEAK--LLEKRSMNTCENTRFSSLLLQKKGGAPTVMLVTDEYHMP 311
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
R++ F GI T + P N+ + A E + + G+
Sbjct: 312 RTRRLFALNGIETIPVVAPMPTPLTRWQPSVQNYDHSRRANYELLATIRDMLFGS 366
>gi|255319326|ref|ZP_05360543.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|262379770|ref|ZP_06072926.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255303719|gb|EET82919.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|262299227|gb|EEY87140.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 379
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 18/186 (9%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ P IV+LG G T+ I + + R+ +T+ + K H I
Sbjct: 204 PVYPASSSKPYAIVVLGGGLTLADNQKDIVVNKYTRL--RLEKTLEVEKQY-----HLPI 256
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN- 175
++SG E+ L E VE LE +S++T +N++FSS +++ G
Sbjct: 257 VLSG--------VEAPYMQAWLKERNVEAK--LLENRSMNTCENSRFSSLLLQKKGGAPT 306
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+IL++ YH+ R++ F GI T + + P N+ + A E + +
Sbjct: 307 VILITDVYHMPRTRRLFALNGIETIPVEAPMPSKLTDWRPSRQNYDHSRRANYEMLATIR 366
Query: 236 AYYRGN 241
G+
Sbjct: 367 DILFGS 372
>gi|261367379|ref|ZP_05980262.1| conserved hypothetical protein [Subdoligranulum variabile DSM
15176]
gi|282570140|gb|EFB75675.1| conserved hypothetical protein [Subdoligranulum variabile DSM
15176]
Length = 272
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/241 (18%), Positives = 91/241 (37%), Gaps = 34/241 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS-YQRPLLSP 60
LL+ + + + WH + + ++ + + GI+ +L+ + S Y P
Sbjct: 35 LLAAVVTVYAIWHKPLHAWLHAPGLGR-VVWWGLVVGGILYALLIGFVAVSGYTNPPTGQ 93
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++++LG G R +PS R+ + + +I SG
Sbjct: 94 E-----KVVIVLGAGLR--------RDKPSTLLRYRLDKAY----AYAAAHPDVLVITSG 136
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NII 177
G + + E L+ G++ + I E S T +N FS +++ I+
Sbjct: 137 GQGRDEWIPEGQAMREYLIAKGLDPEQIVAENASTSTEENFAFSLEILRQRGYDESTPIV 196
Query: 178 LVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
VS+A+H R+ Y + G A + + S+IP L+E + +
Sbjct: 197 YVSNAFHCYRAGHYAERAGFTTVTALPA--ATPWRSVIP---------CYLREALALAYY 245
Query: 237 Y 237
+
Sbjct: 246 W 246
>gi|320093548|ref|ZP_08025440.1| protein of hypothetical function DUF218 [Actinomyces sp. oral taxon
178 str. F0338]
gi|319979504|gb|EFW10974.1| protein of hypothetical function DUF218 [Actinomyces sp. oral taxon
178 str. F0338]
Length = 338
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/245 (19%), Positives = 92/245 (37%), Gaps = 34/245 (13%)
Query: 2 LLSWIF--LIVSYWHLLCQSI---RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
LL +F + ++ L S+ + + MLL ++ W + L Y
Sbjct: 91 LLPLLFGVAVAGWFAALPLSVGLHAPEWVLGAAMLLTAWGAWFFMSFTALLL----YSTF 146
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
K+ + I++ G G P +R RI +RL+ + +
Sbjct: 147 YRLLPRKRVYDYIIIHGAGLNGEEPTPLLR--------GRIETAIRLW---DRQGRRAVL 195
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ---G 173
+ SGG ++E+ + L +GV + I E +S T +N F+ +I+ Q
Sbjct: 196 VPSGGQGPDEVVSEAEAMHRFLRTNGVGEESILDEDRSTTTMENLVFAKQLIEERQRGFP 255
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+V+S YH+ R+ Y + GI + +A +Y ++E+I
Sbjct: 256 YRCAMVTSDYHVFRTATYARAAGIRGDGVGA-----------KTAFYYFPTAFIREFIAF 304
Query: 234 LIAYY 238
++
Sbjct: 305 TRKHW 309
>gi|256958084|ref|ZP_05562255.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256948580|gb|EEU65212.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|315036298|gb|EFT48230.1| conserved hypothetical protein [Enterococcus faecalis TX0027]
Length = 193
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 56/137 (40%), Gaps = 10/137 (7%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAI----PYIKQHPETPVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S ++ K +++V+
Sbjct: 86 GQGANEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKLL---SFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGI 197
S +H+ RSQL + GI
Sbjct: 143 SDFHMYRSQLLAKRAGI 159
>gi|50085083|ref|YP_046593.1| hypothetical protein ACIAD1944 [Acinetobacter sp. ADP1]
gi|49531059|emb|CAG68771.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
Length = 384
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T+ I + + R+ +T+ L + + I++SG
Sbjct: 220 AIVVLGGGLTLADNKKDIVVNNYTRL--RLEKTLEL-----EKKYNLPIVLSG------- 265
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVSSAYHLK 186
E+ L E GVE LE +S++T +N++FSS +++ G ++LV+ YH+
Sbjct: 266 -VEAPYMQTWLKERGVEAK--LLENRSMNTCENSRFSSLLLQKKGGAPTVMLVTDVYHMP 322
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
R++ F GI T + + P N+ + A E + + G+
Sbjct: 323 RTRRLFALNGIETIPVEAPMPTQLTTWQPSQQNYDHSRRANYELLATIRDMLFGS 377
>gi|83589867|ref|YP_429876.1| hypothetical protein Moth_1019 [Moorella thermoacetica ATCC 39073]
gi|83572781|gb|ABC19333.1| Protein of unknown function DUF218 [Moorella thermoacetica ATCC
39073]
Length = 461
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 76/209 (36%), Gaps = 29/209 (13%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
++F+ + I+ + F + K ++I++LG PA
Sbjct: 5 ISIAIIFAALITLILGSTYWYIEWFGWNT------APKRADVIIVLGAAVWANGPSPA-- 56
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ E + L ++ Q T+I +GG + + E L+ G+ +
Sbjct: 57 ----------LMERITLAETLYQQVYAATLITTGGIGRSNPTPEGSAARQVLISHGIPAN 106
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
I E S +T +N + ++++ K+ ++V+ +HL R+ + GI +
Sbjct: 107 VIYEEVTSSNTRENLVGALNIMRKHGWKSAVIVTHDFHLLRAMTEARRLGIEVSGAGVH- 165
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILI 235
+ L L+E I L+
Sbjct: 166 ----------ETAMFRPPLVLREVIANLV 184
>gi|325263793|ref|ZP_08130526.1| hypothetical protein HMPREF0240_02792 [Clostridium sp. D5]
gi|324030831|gb|EGB92113.1| hypothetical protein HMPREF0240_02792 [Clostridium sp. D5]
Length = 239
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/233 (16%), Positives = 76/233 (32%), Gaps = 29/233 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
S + HLL + I WG+ ++ + +
Sbjct: 31 FSLFWPAAGVLHLLLAYFAPGGTAGHLAVTVVLICWGVFLYT------EAWICGAMLKKT 84
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + I++LG +R S R + Y +I+SGG
Sbjct: 85 RDEVPYIIILGA---------QVRGTRITNSLKRRLDAACEYLEQH---TDTKVIVSGGQ 132
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ E+ + L G++ I E S T++N + SS +I + + +V++
Sbjct: 133 GIGEDITEAAAMADYLEIRGIDSSRIYKEDTSTSTWENMKNSSRIIGD-PRQPCAVVTNN 191
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+HL R+ L + G + I S ++E+ +L
Sbjct: 192 FHLYRALLIGKKAGF----------TNLHGISASSNPVLQLNYMVREFFALLW 234
>gi|328464062|gb|EGF35549.1| hypothetical protein AAULH_11576 [Lactobacillus helveticus MTCC
5463]
Length = 367
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/242 (16%), Positives = 92/242 (38%), Gaps = 25/242 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ ++ LI+S L ++S + I + +L L +
Sbjct: 116 LIFGFVALILSLMFLFGSGQYLPRWLSVLLASIPAIAI-YLGLVLYNFLINLLLYQIYPR 174
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL-YKSCKQHSMHCTIIIS 119
++K+ + +++LG G + S +RI ++ + ++ II+S
Sbjct: 175 RYKQ--DYLIVLGAGLINGDRV-------SKLLAARINRAIQYSNRQYQKGRKRPIIIMS 225
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NI 176
G + E++ + G++ + + +E +S +T+QN FS + G
Sbjct: 226 GSQGPDEKIPEAVAMAKFARKRGIKTNHLLIEDKSKNTYQNMLFSKRLATKDFGSSNFRS 285
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
S+ YH+ R+ L + G+ + + +YL ++E+ G+ +
Sbjct: 286 TFFSNNYHIFRAALLSKEVGLKANGVGA-----------FTRLYYLPNAIIREFAGVFVM 334
Query: 237 YY 238
+
Sbjct: 335 HK 336
>gi|228991260|ref|ZP_04151218.1| hypothetical protein bpmyx0001_20190 [Bacillus pseudomycoides DSM
12442]
gi|228768484|gb|EEM17089.1| hypothetical protein bpmyx0001_20190 [Bacillus pseudomycoides DSM
12442]
Length = 185
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 34/203 (16%)
Query: 38 WGIIPTILLKHLQFSYQ----RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
W ++ +L L Y + + + + +++LG +PS
Sbjct: 4 WILLVILLFPPLCIMYMTYRMKKVACEKLSDNAPYVLILGA--------KLFGDKPSLSL 55
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
+R+ + +I+SGG + + E+ N L++ G+E + I +E +
Sbjct: 56 QNRLDVAL----MYLNSHPETKVIVSGGQGEDEDIPEAHSMRNYLIKHGIEENRIFIEDR 111
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG--INTKASCSDYLNAYY 211
S T++N +FS + + ++VS+ YHL R+++ + G + + A+ + +
Sbjct: 112 STSTYENLKFSMDL---YHVMHAVVVSNTYHLYRTKIIAKRLGMQMESLAAPTPRRSEKK 168
Query: 212 SIIPLSANFYLTELALKEYIGIL 234
+ ++EY I+
Sbjct: 169 AY-------------IREYAAII 178
>gi|227519414|ref|ZP_03949463.1| conserved hypothetical protein [Enterococcus faecalis TX0104]
gi|227073121|gb|EEI11084.1| conserved hypothetical protein [Enterococcus faecalis TX0104]
Length = 193
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 10/144 (6%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAI----PYIKQHPETPVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S ++ K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKLL---SFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
S +H+ RSQL GI+ + +
Sbjct: 143 SDFHMYRSQLLANRAGISNVSGIT 166
>gi|311029687|ref|ZP_07707777.1| hypothetical protein Bm3-1_03874 [Bacillus sp. m3-13]
Length = 192
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 31/223 (13%), Positives = 83/223 (37%), Gaps = 35/223 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
++ + K ++L +I I++ L + + K + +++LG
Sbjct: 1 MITKKRVKTLMKITMVMLLIYI-------IIVHSLIYQ----TAKQEPPKGVDYLIVLGA 49
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
+ + + + + +I SGG + E+
Sbjct: 50 ------------RVKGEVMTKALLFRVEAALEYLKENPNTKVIASGGQGPGEDITEAEAM 97
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
++ G++ + I LE +S TF+N +S +++++ G ++ +VS+ +H+ R+ L +
Sbjct: 98 RRYFVKHGIKEERIILEDRSTTTFENLSYSKALMED--GASVAIVSNDFHMYRASLIGKR 155
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+++ + + +L +EY + +
Sbjct: 156 LDF----------AEVHTLAGKTPKIAIFKLWSREYFAVAKTW 188
>gi|73539728|ref|YP_294248.1| hypothetical protein Reut_A0022 [Ralstonia eutropha JMP134]
gi|72117141|gb|AAZ59404.1| Protein of unknown function DUF218 [Ralstonia eutropha JMP134]
Length = 337
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/241 (14%), Positives = 87/241 (36%), Gaps = 33/241 (13%)
Query: 3 LSWIFLIVSYWHLLCQSI---RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
L+++ L + + + C + R+ F+ W + + ++ +S
Sbjct: 119 LAFLLLALCWHRVACWRLANPRRQLLWRALWTAFAV--WLVTVGVFFHGIRSGLS---VS 173
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
I++LG+GT P + + + + +++S
Sbjct: 174 VPTGVPIQAIIVLGSGT------------PDCHASPALTARLEQGLIQARRLPAAKVVVS 221
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NI 176
GG E+ + + L+ GV D + E +S T +N FS +++ I
Sbjct: 222 GGPDFGRHCTEADIMADYLVARGVAADRLIREGRSTSTEENLVFSRQLLEAQNVDADGPI 281
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++V+S +H++R+ + G + + + + + L+EY + +
Sbjct: 282 VVVTSDFHVRRAVGIARKAGFSQI----------FGVGAATPLYLRFNAWLREYFASISS 331
Query: 237 Y 237
+
Sbjct: 332 W 332
>gi|260554696|ref|ZP_05826917.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
gi|260411238|gb|EEX04535.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
Length = 376
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 21/194 (10%)
Query: 52 SYQRPLLSPQWKKDGN---IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
Y R P K + IV+LG G T+ I + + R+ +T+ +
Sbjct: 193 EYVRKNPLPAQPKKLSEPYAIVVLGGGLTLDKN--GKDIVVNSYTRLRLEKTLEV----- 245
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ H I++SG E+ L GV+ LE +S++T +N +FSS ++
Sbjct: 246 EKKNHLPIVLSG--------VEAPYMQAWLKARGVDAK--LLEKRSMNTCENTRFSSLLL 295
Query: 169 KNMQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ G ++LV+ YH+ R++ F GI T + P N+ + A
Sbjct: 296 QKKGGAPTVMLVTDEYHMPRTRRLFALNGIETIPVTAPMPTPLTRWQPSIQNYDHSRRAN 355
Query: 228 KEYIGILIAYYRGN 241
E + + G+
Sbjct: 356 YELLATIRDMLFGS 369
>gi|255971798|ref|ZP_05422384.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|312951115|ref|ZP_07770020.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|255962816|gb|EET95292.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|310630891|gb|EFQ14174.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|315154145|gb|EFT98161.1| conserved hypothetical protein [Enterococcus faecalis TX0031]
gi|315158992|gb|EFU03009.1| conserved hypothetical protein [Enterococcus faecalis TX0312]
gi|323481728|gb|ADX81167.1| conserved hypothetical protein [Enterococcus faecalis 62]
Length = 193
Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAI----PYIKQHPETPVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S ++ K +++V+
Sbjct: 86 GQGANEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKLL---YFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
S +H+ RSQL + GI+ + +
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGIT 166
>gi|284052580|ref|ZP_06382790.1| hypothetical protein AplaP_14023 [Arthrospira platensis str.
Paraca]
gi|291568842|dbj|BAI91114.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 328
Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/191 (24%), Positives = 77/191 (40%), Gaps = 17/191 (8%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IVLLG GTT P +P + RI T LY+ II +G
Sbjct: 136 GERAGAIVLLGRGTTQ-PKLPYRTQIQLTATGDRIPYTAELYRE---RLARLVIIAAGDR 191
Query: 123 PQK-HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILVS 180
+ H E+ L+ GV DI L T+S + A +++ + G+ IILV+
Sbjct: 192 HELIHPTNEAKDIQQLLIYMGVLPRDILLATESHTIREEALEVKDIMEKRRLGRTIILVT 251
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDY-----------LNAYYSIIPLSANFYLTELALKE 229
SA ++R+ L F G+ + +++ ++ P + L+ + E
Sbjct: 252 SALEMRRAALAFTQVGLKVIPAPTNFSTFIPYGKRKDRVSFQDFAPNADALVLSTRVVDE 311
Query: 230 YIGILIAYYRG 240
Y+ + RG
Sbjct: 312 YLATFYYFLRG 322
>gi|229544814|ref|ZP_04433539.1| conserved hypothetical protein [Enterococcus faecalis TX1322]
gi|256854151|ref|ZP_05559516.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|229310086|gb|EEN76073.1| conserved hypothetical protein [Enterococcus faecalis TX1322]
gi|256711094|gb|EEU26137.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|315030796|gb|EFT42728.1| conserved hypothetical protein [Enterococcus faecalis TX4000]
Length = 193
Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 10/144 (6%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + I++LG + PS +R+ + + +I+SG
Sbjct: 33 QPTDKPDAILILGA---RVLGTSKETALPSRVLQARLDVAI----PYIKQHPETPVIVSG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V LL GV I LE ++ T +N S + K +++V+
Sbjct: 86 GQGADEPATEAAVMKQYLLNKGVPEKQILLENRATRTKENIVNSQKL---FSFKRLVIVT 142
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
S +H+ RSQL + GI+ + +
Sbjct: 143 SDFHMYRSQLLAKRAGISNVSGIT 166
>gi|54025784|ref|YP_120026.1| hypothetical protein nfa38140 [Nocardia farcinica IFM 10152]
gi|54017292|dbj|BAD58662.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 218
Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 67/144 (46%), Gaps = 12/144 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++ IV+LG G + P + E +R + + II++GG
Sbjct: 75 FRGPDTAIVVLGYG-----------LLPDGAMRPELVERLRAGYAQALLAPASPIIVTGG 123
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+P+ +G E+ + L+ G+ + + ++ T +NA++++ ++ + ++ ++V+S
Sbjct: 124 NPR-NGTTEAAAMADWLVARGIPPARVHRDDRATTTRENAEYAARILAALGARDAVVVTS 182
Query: 182 AYHLKRSQLYFQHFGINTKASCSD 205
H+ R+ F+ GI A+ +
Sbjct: 183 GDHVPRAVALFRAAGIEVAAALTP 206
>gi|294651352|ref|ZP_06728671.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292822754|gb|EFF81638.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 284
Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 82/244 (33%), Gaps = 28/244 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL--LKHLQFSYQRPLL 58
+L + L + + + FF + GW L L + +
Sbjct: 59 VLPLLLGLFFCLYSFFYYHLERFFFYHFRLHSIWRFGWLCFWVWLISLGYFFNYLNKNNS 118
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ I++LG+G +PS R+ + + +++
Sbjct: 119 QVEVPTSVAAIIVLGSGIEN--------GQPSATLAKRLDRAAPIA----LTQPNAKLLL 166
Query: 119 SGGDPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQG---K 174
+GG +E+IV + L + + I LE +S T N + S +++ + +
Sbjct: 167 TGGVDFGETESEAIVMSRYLQQQHHIPATQIILEDKSTSTELNLKNSQPLLQAHKISLQQ 226
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I +V+S +H R+ + G + S PL + L+EY +
Sbjct: 227 PIAIVTSDFHTLRAAAIAKKQGYSNI-------TTIGSTTPLQTRY---NAWLREYFAYV 276
Query: 235 IAYY 238
+
Sbjct: 277 SGWL 280
>gi|91787552|ref|YP_548504.1| hypothetical protein Bpro_1670 [Polaromonas sp. JS666]
gi|91696777|gb|ABE43606.1| protein of unknown function DUF218 [Polaromonas sp. JS666]
Length = 255
Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 34/231 (14%), Positives = 79/231 (34%), Gaps = 15/231 (6%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ ++L + L + + + ++ +V+LG G
Sbjct: 32 FRGRRGGLSLALVSVMLLGLLSCHGTSVWLARTILPQFAPLPVAALKTGKVQAVVVLGGG 91
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA----ES 131
+P+ + +R+ + L + + SGG + E+
Sbjct: 92 ALPQAPEYG-EAQPNAHTAARLRYGVWLARQS-----GLPLGFSGGMGWAASESQRDSEA 145
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
V L+ E ++ DT NA+ + +++ + I LV+ A+H+ RS
Sbjct: 146 EVARRMALQDYRLALR-WSEAEARDTAGNARLLAPLLRRDGVQRIALVTHAWHMPRSVAA 204
Query: 192 FQHFGINTKASCSDYLNAYYS----IIPLSANFYLTELALKEYIGILIAYY 238
F+ G+ + Y+ +P + + L+E + + +A +
Sbjct: 205 FEAAGLQVTPAPMGYVIPLERDILEWMPSAHGLMASRNVLREGLALALARF 255
>gi|226951670|ref|ZP_03822134.1| protein of hypothetical function DUF218 [Acinetobacter sp. ATCC
27244]
gi|226837586|gb|EEH69969.1| protein of hypothetical function DUF218 [Acinetobacter sp. ATCC
27244]
Length = 284
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 82/244 (33%), Gaps = 28/244 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTIL--LKHLQFSYQRPLL 58
+L + L + + + FF + GW L L + +
Sbjct: 59 VLPLLLGLFFCLYSFFYYHLERFFFYHFRLHSIWRFGWLCFWVWLISLGYFFNYLNKNNS 118
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ I++LG+G +PS R+ + + +++
Sbjct: 119 QVEVPTSVAAIIVLGSGIEN--------GQPSATLAKRLDRAAPIA----LTQPNAKLLL 166
Query: 119 SGGDPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQG---K 174
+GG +E+IV + L + + I LE +S T N + S +++ + +
Sbjct: 167 TGGVDFGETESEAIVMSRYLQQQHHIPATQIILEDKSTSTELNLKNSHPLLQAHKISLQQ 226
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I +V+S +H R+ + G + S PL + L+EY +
Sbjct: 227 PIAIVTSDFHTLRAAAIAKKQGYSNI-------TTIGSTTPLQTRY---NAWLREYFAYV 276
Query: 235 IAYY 238
+
Sbjct: 277 SGWL 280
>gi|167757031|ref|ZP_02429158.1| hypothetical protein CLORAM_02580 [Clostridium ramosum DSM 1402]
gi|237735899|ref|ZP_04566380.1| membrane associated protein [Mollicutes bacterium D7]
gi|167703206|gb|EDS17785.1| hypothetical protein CLORAM_02580 [Clostridium ramosum DSM 1402]
gi|229381644|gb|EEO31735.1| membrane associated protein [Coprobacillus sp. D7]
Length = 190
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
IG+GI+ LL L +++P ++KK I+ G I EPS
Sbjct: 5 VIIGFGILN--LLAFL-LVFKKPYKKQRYKKYDCAII---CGYPAN-----IDGEPSTIM 53
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
SR+ + LYK K +I+SGG + E+ + + + GV+++DI +E Q
Sbjct: 54 KSRVEMGVTLYKKDKIKF----LILSGGAVKNE-YQEAKIMASYAISLGVKKEDILIEGQ 108
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
S T+ N +S +++ KN ++V++++HL+++ Y + F ++
Sbjct: 109 SRSTYHNLMYSRDIMQINGLKNALVVTNSWHLRKADHYARKFKLD 153
>gi|260438932|ref|ZP_05792748.1| putative membrane protein [Butyrivibrio crossotus DSM 2876]
gi|292808583|gb|EFF67788.1| putative membrane protein [Butyrivibrio crossotus DSM 2876]
Length = 258
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/275 (14%), Positives = 98/275 (35%), Gaps = 57/275 (20%)
Query: 1 MLLSWIFLIVSYWHL-----------------LCQSIRKIFFMSCFMLLFSF-------- 35
++L+ IF I++ + +FF C +F
Sbjct: 6 IVLTVIFEIIAIFSFSYFIVMVRYAGIGTSFAFVWLGMALFFAVCGAAVFILGKRNVSLP 65
Query: 36 ------IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
I I+L + + + + + +++LG ++R
Sbjct: 66 PAVKVVISVLAAAIIILFAVVEGMIISGMKEKTNEQYDYVIVLGARVRGTTVTKSLR--- 122
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
R+ + + + + +++SGG ++E+ + L++ GV++ +
Sbjct: 123 -----KRLDKAFE----YIEKNDNTILVLSGGQGNGEDVSEAQAMYDYLVQKGVDKSRLL 173
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNII---LVSSAYHLKRSQLYFQHFGINTKASCSDY 206
LE +S T +N ++S +I+ + +++ +H+ R++L ++ G + K +
Sbjct: 174 LEDKSTSTVENIEYSMKIIEKNSQNATVEVGFITNNFHVFRAELVCRNMGYDIKGIPA-- 231
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
S N L +E+ ++ GN
Sbjct: 232 ---------KSDNKLLVNYMFREFFALVKYKITGN 257
>gi|226954131|ref|ZP_03824595.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|226835172|gb|EEH67555.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
Length = 373
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 18/175 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T+ I + + R+ T+ + K + I++SG
Sbjct: 209 AIVVLGGGLTL--GANGKDIVVNNYTRLRLERTLEVEKQY-----NLPIVLSG------- 254
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHLK 186
E+ L E G++ LE +S++T +N +FSS +++ G +I ++ YH+
Sbjct: 255 -VEAPYMQAWLEERGIKAK--LLENRSMNTCENTRFSSLLLQKKGGAPKVIFITDEYHMP 311
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
R++ F GI T + S P N+ + A E + + G+
Sbjct: 312 RTRRLFALNGIETVPVVAPMPTKLTSWRPSEKNYDHSRRANYELLATIRDVLFGS 366
>gi|225019145|ref|ZP_03708337.1| hypothetical protein CLOSTMETH_03097 [Clostridium methylpentosum
DSM 5476]
gi|224948092|gb|EEG29301.1| hypothetical protein CLOSTMETH_03097 [Clostridium methylpentosum
DSM 5476]
Length = 188
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 80/216 (37%), Gaps = 32/216 (14%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+ C ++ F + +I +L + R DG +IV LG
Sbjct: 4 VLCVLVAFGALFALVISCFMLFGFRSYQGRDF-------DGTVIV-LGCHIKGD------ 49
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
+PS R+ + K + + I+SGG + +E+ + L E G+
Sbjct: 50 --QPSVMLAGRLDKAAEFLKENPRANC----IVSGGRGKDEMYSEAEIMKKYLTEKGISP 103
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
I E QS++T N + S M++ GK ++V+ +H R+QL +N+++
Sbjct: 104 QRILEENQSVNTQTNLRNSKQMMEEKGLGKTAVIVTDRFHQYRAQLCADRIQLNSQSVPC 163
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ L+E +L A+
Sbjct: 164 ETRPDLLVAF-----------WLREIPAVLQAWLFA 188
>gi|310287895|ref|YP_003939153.1| hypothetical protein [Bifidobacterium bifidum S17]
gi|309251831|gb|ADO53579.1| conserved hypothetical protein, domain DUF218 [Bifidobacterium
bifidum S17]
Length = 200
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 68/189 (35%), Gaps = 33/189 (17%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
M FS ++ + L + L K+ + I++ G G T P
Sbjct: 1 MWFFSSFAALLVYSTLYRLL-----------PRKRVYDYIIIHGAGLMPDGT-------P 42
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE-SGVERDDI 148
+ R+ + + L++ + + SGG ++E+ L E V D +
Sbjct: 43 TPLLRGRVDKGVALWEKQGKTG---VFVASGGQGSDEVVSEAESMRRYLTESRHVPADAV 99
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQG-----------KNIILVSSAYHLKRSQLYFQHFGI 197
+E +S T +N +FS ++ G LV+S YH+ R+ Y H G+
Sbjct: 100 LMEDRSTTTMENLRFSKEIMDARSGVQSVPGRRGLAYRCALVTSDYHVFRASEYAHHIGL 159
Query: 198 NTKASCSDY 206
Y
Sbjct: 160 KADGVRQPY 168
>gi|167957605|ref|ZP_02544679.1| hypothetical protein cdiviTM7_02994 [candidate division TM7
single-cell isolate TM7c]
Length = 204
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 54/229 (23%), Positives = 90/229 (39%), Gaps = 32/229 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
I+ I + F + IG + P L + S + S K + IV + G T
Sbjct: 2 IKAIIAVIVFAFMVLLIGTYLSPDDL-RGCDISLKGKESSNLACKRVDAIVAVSGGDTD- 59
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+R E ++LYK+ + +I SG K G + + L
Sbjct: 60 ---------------ARTDEAVKLYKNGWSN----LLIFSGAAADKTGPSNAKAMRKHAL 100
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ-HFGIN 198
+ GV I +E S T +NA+ S ++ + IILV+SAYH +R+ + F+ G N
Sbjct: 101 KKGVPDSAIVIEENSNTTQENARLSRNVFSERKISRIILVTSAYHQRRAGIEFRLAAGGN 160
Query: 199 TK----ASCSD-YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
+ D + ++ I P ++ E I I+ Y +R
Sbjct: 161 VEVINHPVAQDKQWSNWWWISPNGWWLAMS-----EIIKIIATYAGASR 204
>gi|77745325|gb|ABB02563.1| unknown [Lactobacillus reuteri]
Length = 271
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 93/236 (39%), Gaps = 25/236 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
+ + ++ W + ++ + S L + + + L + +
Sbjct: 43 VLMLLNLIVVWPIFAFLLKNLPIQSVSWLSSLVVATIDVLSTFNLILFCVFSCCTRLRKC 102
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++LG P + +R+ + + +C + II SGG
Sbjct: 103 PATVQGFLVLGAAVKHGQVPPVL--------ATRLDKAI----NCWKTHQSAKIIGSGGI 150
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
QK +E+ V L+ G+ I E + L+T+QN F+S +IK + +++V+S
Sbjct: 151 VQKAKESEAEVMAGYLIAHGIPARKIIRENKGLNTWQNLAFASQLIKPQ--ETVVVVTSD 208
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+H+ R++ Y + G+N + I + Y +++Y+GI+ ++
Sbjct: 209 FHVLRARAYARKMGLN-----------WSFISSKTPWRYCPLTFIRDYLGIIRDHW 253
>gi|240146766|ref|ZP_04745367.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
gi|257201050|gb|EEU99334.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
gi|291536643|emb|CBL09755.1| Uncharacterized conserved protein [Roseburia intestinalis M50/1]
gi|291541019|emb|CBL14130.1| Uncharacterized conserved protein [Roseburia intestinalis XB6B4]
Length = 256
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/247 (17%), Positives = 85/247 (34%), Gaps = 38/247 (15%)
Query: 1 MLLSWIFLIVSYWH-------LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY 53
+L+S L + L+ + RK ++ F+L+ I + L ++
Sbjct: 37 ILISLFLLCYGIFFGRMNRRALILWNGRKTHWICVFLLVLVLIMIMTV-------LAETF 89
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
+ V+LG +PS RI +
Sbjct: 90 LMIHSALHTPPQNTTAVVLGC--------SVKGTKPSRILEERIDAAY----DYLSVNKD 137
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
I+SGG + E+ L + G+ + + LE +S T +N +++ ++K+
Sbjct: 138 AVCILSGGRGPGEDITEAQCMYEVLTKRGISENRLILEERSTTTEENLKYTGEILKDRGL 197
Query: 174 K-NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+ LV+S +H R+ G+ + ++ + + Y ++E G
Sbjct: 198 DMTVTLVTSEFHEYRANQMAARLGMKSYSTPAH-----------TFFVYFPTYYVRELYG 246
Query: 233 ILIAYYR 239
IL R
Sbjct: 247 ILYYELR 253
>gi|160913536|ref|ZP_02076227.1| hypothetical protein EUBDOL_00012 [Eubacterium dolichum DSM 3991]
gi|158434088|gb|EDP12377.1| hypothetical protein EUBDOL_00012 [Eubacterium dolichum DSM 3991]
Length = 185
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 76/206 (36%), Gaps = 25/206 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ L F F ++ PL Q + ++ ++LG+ + ++
Sbjct: 2 MIIIICLFFLFASCYP-----------YHRFPLYIQQTHQGYDVCIVLGSPSNTDGSLSR 50
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
I+ + R+ + LY+ I+ISG + E+ V + + V
Sbjct: 51 IQKQ-------RMDHAITLYQKGSIQ----KILISG-AAVANCFIEAEVMKDYAIAQNVP 98
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
DI LE + +T++N ++++ + I+V+S +H++R+ + Q F +
Sbjct: 99 EKDILLEKYAKNTYENLKYAADLCNKHHFSKTIIVTSGFHIRRAGFFAQKFLTDFTFYPV 158
Query: 205 DYLNAYYSIIPLSANFYLTELALKEY 230
I + + E+
Sbjct: 159 SEKENQRYFI--TEYLRMWNTLYYEW 182
>gi|312793878|ref|YP_004026801.1| hypothetical protein Calkr_1698 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181018|gb|ADQ41188.1| protein of unknown function DUF218 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 195
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 12/137 (8%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K + I++LG PS R+ LYK II+ G
Sbjct: 35 PKKSDCIIVLGCAVYGD--------FPSPFFRERLNRAFELYKKGYARY----IIVCGAK 82
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ L+E GV + I E +S T++N +S ++ K+ I+VS+
Sbjct: 83 GPGENISEAEAGKRYLVERGVLPELILKEDKSFSTYENLLYSKKIMNKKGFKSTIIVSNM 142
Query: 183 YHLKRSQLYFQHFGINT 199
+HL+R+ L + +N
Sbjct: 143 FHLRRASLIAKKLKMNA 159
>gi|71066602|ref|YP_265329.1| hypothetical protein Psyc_2048 [Psychrobacter arcticus 273-4]
gi|71039587|gb|AAZ19895.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 264
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 45/250 (18%), Positives = 85/250 (34%), Gaps = 40/250 (16%)
Query: 2 LLSWIFLIVSYWHLL-------CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
LL +F+ + + + + ++ M L F+ +G+ L + ++
Sbjct: 42 LLGMVFVAHGIFWRNIRRFICQNRWLSRFWYALWTMFLIWFVSFGVFIYALQQQIEQ--- 98
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
S + I++LG+GT P + R+ L S K
Sbjct: 99 ----STRPIPKVAAIIVLGSGTVAGKPTPTL--------AKRLDTAAPLIHSQKS----A 142
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I SGG +E+ + L + + I E QS T +N +S ++
Sbjct: 143 LVITSGGIGFGQTRSEANIMATYLYDTYDISLKRILQEGQSTSTAENLIYSQEILAAKGL 202
Query: 174 K---NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
I +V+S +H+ R+ +H G YL P + +EY
Sbjct: 203 SIKAPIAIVTSDFHIIRAANIARHQG---------YLQPIMLASPTPLSIRY-NAWFREY 252
Query: 231 IGILIAYYRG 240
+ + G
Sbjct: 253 FAFVSGWLFG 262
>gi|225024219|ref|ZP_03713411.1| hypothetical protein EIKCOROL_01091 [Eikenella corrodens ATCC
23834]
gi|224943244|gb|EEG24453.1| hypothetical protein EIKCOROL_01091 [Eikenella corrodens ATCC
23834]
Length = 221
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 25/198 (12%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
L + LL Q R I C ++L W L +SY S + +
Sbjct: 2 LAIFRGSLLRQVWRGIKL--CLLVLLVQAAWCT-------WLVYSYSTRTAS----RRAD 48
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
V+LG A PS RI + LY++ + +I +GG P+
Sbjct: 49 AAVVLGA--------AAWGKNPSPVFRERINHGITLYRNNRVG----KLIFTGGTPKAGY 96
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ V GV DI LET S DT QN + + +++ N ++++++S YHL R
Sbjct: 97 MTEAEVARRYARGHGVPNKDILLETTSRDTQQNLENTKALMYNNGLESVVIISDPYHLAR 156
Query: 188 SQLYFQHFGINTKASCSD 205
+ + G++ + +
Sbjct: 157 AAAVADYVGLDYQTEPTP 174
>gi|327330943|gb|EGE72687.1| hypothetical protein HMPREF9337_01510 [Propionibacterium acnes
HL096PA3]
Length = 349
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 101/274 (36%), Gaps = 57/274 (20%)
Query: 2 LLSWIFLI--VSYWHLLCQSIRKIFFMSCFMLLFSFIGW---------------GIIPTI 44
+L ++ ++ V W +S+ + + + L + W GI T+
Sbjct: 72 VLPFLLIVNGVEMWRKEGRSLSNVLSGALGVGLLVLMAWCLRSVFSPFEPWAVAGISATM 131
Query: 45 LLKHLQFSYQRPLLS------PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
L L F + L S + + IV+LG+ + SR+
Sbjct: 132 ALGWLSFGFLGYLASVFVIHRAKPLPGNHQIVVLGSALVKGKVPKLL--------ASRLD 183
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
+ +++ + H II SGG AE L+E G+ R+ + +E Q+ +T
Sbjct: 184 RGIGQWRTDRDAGFHSVIIPSGGKGDDEPRAEGEAMAEYLVEHGIPRECVVVENQAANTD 243
Query: 159 QNAQFSSSMI---------------KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+N S ++ + Q +++ +S+YH R+ + G+ +
Sbjct: 244 ENISLSRQVMPTQVRSVPSRRAEAARQRQNPQVVVATSSYHAVRAAELCRRQGLRVRVLG 303
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ +A ++L L+EYI +L +
Sbjct: 304 AP-----------TATYFLPSAMLREYIALLASR 326
>gi|315304604|ref|ZP_07874845.1| putative cytoplasmic protein [Listeria ivanovii FSL F6-596]
gi|313627033|gb|EFR95925.1| putative cytoplasmic protein [Listeria ivanovii FSL F6-596]
Length = 189
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 25/189 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+RKIF + + L I+ + Q + + +++LG
Sbjct: 4 LRKIFIVFIVISLLYLF---IVAICMFSGTQT---------KPSDNAKTVLILGAKVIGE 51
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P +PS R+ + +I+SGG E+ V L+
Sbjct: 52 PA------QPSHVLQERLDAAV----DYLNEHPKARVIVSGGQGTDESETEASVMEEYLV 101
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
G+ R I ET+S T +N S Q + ++V+S YH+ R+ + + I+
Sbjct: 102 NEGIRRARIDTETKSKRTEENISNSKE---KFQLEKTVIVTSDYHMYRALMLAKRQNIDA 158
Query: 200 KASCSDYLN 208
+
Sbjct: 159 TGLPAKSKT 167
>gi|293611000|ref|ZP_06693299.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826652|gb|EFF85018.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 261
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 42/246 (17%), Positives = 88/246 (35%), Gaps = 32/246 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ---RPL 57
++ + + + L + + FF + GW L+ L + +
Sbjct: 36 VIPLILGAFLCLYSLFYYHLERFFFYHYRLHTLWRFGWLCFWIWLI-GLGYFFSFIKENK 94
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ I++LG+G +PS R+ L +Q I+
Sbjct: 95 DTSNNIPPVKAIIVLGSGVEN--------GQPSTILAKRLDTAAALALKQQQ----AQIV 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--- 173
++GG +E++V + L + + RD + LE +S T N + S +++
Sbjct: 143 LTGGLDFSEKESEALVMSRYLEQKYHIARDQMILEDKSTSTELNLKNSKPLLEQHHITLD 202
Query: 174 KNIILVSSAYHLKRSQLYFQHFG-INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+ I +V+S +H+ R+ + G I ++ PL+ + L+EY
Sbjct: 203 QPIAIVTSDFHIPRAIAIAKKQGYIQVYGVAAE--------TPLATRY---NAWLREYFA 251
Query: 233 ILIAYY 238
+
Sbjct: 252 YASGWL 257
>gi|119026002|ref|YP_909847.1| hypothetical protein BAD_0984 [Bifidobacterium adolescentis ATCC
15703]
gi|118765586|dbj|BAF39765.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
Length = 250
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 79/206 (38%), Gaps = 35/206 (16%)
Query: 1 MLLSWIFLIVS------YWHLLCQSIRKIFFMSCFMLLFSFIGWG--IIPTILLKHLQFS 52
++L+ +F +++ +W L + IR + + +F II +
Sbjct: 41 LVLAVVFALLAIGIACHWWVALPRIIRGAIIAVVAIGIVAFCTIEGCIIGNM-------- 92
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ Q + D + +++LG PS R+ T+ + +
Sbjct: 93 ------NAQGEPDLDYVIVLGA--------QVRESGPSKALRYRLDRTI----DYLEENP 134
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
I+SGG AE+ + L + G+ + I E++S T +N S +++
Sbjct: 135 DTICIVSGGQGHNEPFAEAQGMADYLQKHGIAENRIIQESKSESTMENIVNSKKLMRQEN 194
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGIN 198
++ +V++ +H+ R+ G+
Sbjct: 195 -ASVGIVTNDFHMFRALQIAHANGLK 219
>gi|296393440|ref|YP_003658324.1| hypothetical protein Srot_1020 [Segniliparus rotundus DSM 44985]
gi|296180587|gb|ADG97493.1| protein of unknown function DUF218 [Segniliparus rotundus DSM
44985]
Length = 344
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 43 TILLKHLQFSYQRPLLSPQWKKD-----GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+L +Q PL D IV LG G ++P + R+
Sbjct: 149 DRMLTAIQSQASAPLSEEVPAADSLRGAATTIVTLGAGLRPDGSMPQV-------LLERL 201
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+T+ L + +II++GG PQ +GL E+ + L+ GV+ + E +S T
Sbjct: 202 KKTLDLALA----DPEASIIVTGGKPQ-NGLTEADAMADWLVGQGVDPARVHKEDRSAST 256
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
QNA S+S++++++ +++V+SA H +R+ +
Sbjct: 257 VQNALNSASILRSLKPSQLVVVTSANHARRASALLE 292
>gi|269119959|ref|YP_003308136.1| hypothetical protein Sterm_1340 [Sebaldella termitidis ATCC 33386]
gi|268613837|gb|ACZ08205.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 208
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 16/176 (9%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K+ ++ V+LG G + P + RI + LYK+ +I +G
Sbjct: 35 DEKQPADVAVILGAGASDEKVSPVFQ--------ERINHGISLYKNKYVK----KLIFTG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + + +++ ++ GV +DDI LE S+ T +N + + ++ ILVS
Sbjct: 83 GTGKGNQNSDAYTAMQYAIKQGVPKDDILLEEMSVITQENIKNAKMIMDKNSYHTAILVS 142
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
H+KR+ L ++ I+ +S + Y + + F L E+ Y+G I
Sbjct: 143 DPLHMKRAMLMAKNSKIDCYSSPTP--TTKYITLKSTLPFLLREVFF--YVGYKIY 194
>gi|327331177|gb|EGE72917.1| hypothetical protein HMPREF9344_01832 [Propionibacterium acnes
HL097PA1]
Length = 349
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 101/274 (36%), Gaps = 57/274 (20%)
Query: 2 LLSWIFLI--VSYWHLLCQSIRKIFFMSCFMLLFSFIGW---------------GIIPTI 44
+L ++ ++ V W +S+ + + + L + W GI T+
Sbjct: 72 VLPFLLIVNGVEMWRKEGRSLSNVLSGALGVGLLVLMAWCLRSVFSPFEPWAVAGISATM 131
Query: 45 LLKHLQFSYQRPLLS------PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
L L F + L S + + IV+LG+ + SR+
Sbjct: 132 ALGWLSFGFLGYLASVFVIHRAKPLPGNHQIVVLGSALVKGKVPKLL--------ASRLD 183
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
+ +++ + H II SGG AE L+E G+ R+ + +E Q+ +T
Sbjct: 184 RGIGQWRTDRDAGFHSVIIPSGGKGDDEPRAEGEAMAEYLVEHGIPRECVVVENQAANTD 243
Query: 159 QNAQFSSSMI---------------KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+N S ++ + Q +++ +S+YH R+ + G+ +
Sbjct: 244 ENISLSRQVMPTQVRSVPSRRAEAARERQNPQVVVATSSYHAVRAAELCRRQGLRVRVLG 303
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ +A ++L L+EYI +L +
Sbjct: 304 AP-----------TATYFLPSAMLREYIALLASR 326
>gi|17229308|ref|NP_485856.1| hypothetical protein all1816 [Nostoc sp. PCC 7120]
gi|17130906|dbj|BAB73515.1| all1816 [Nostoc sp. PCC 7120]
Length = 215
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 25/197 (12%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
++ + + +I LLF+ I I S + +
Sbjct: 14 FMLKNVPKKWLFRILITIISALLFA-ISSTAISIYSYG-----------SNSYNNKADAA 61
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG P R RI + LYK + II +GG + + LA
Sbjct: 62 IVLGAAVWGEEPSPVFR--------ERINHAINLYK----NGAISKIIFTGGVGEINELA 109
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NMQGKNIILVSSAYHLKRS 188
E+IV N + GV+ D+ ETQS T+QN + + ++ N + +++S HLKR+
Sbjct: 110 EAIVGRNYAIARGVKAADVLTETQSRTTYQNLKNAIEVVGTNEKPTKFLIISDPLHLKRA 169
Query: 189 QLYFQHFGINTKASCSD 205
L ++ GI+ S +
Sbjct: 170 VLMARNLGIDAYPSPTP 186
>gi|145220256|ref|YP_001130965.1| hypothetical protein Cvib_1452 [Prosthecochloris vibrioformis DSM
265]
gi|145206420|gb|ABP37463.1| protein of unknown function DUF218 [Chlorobium phaeovibrioides DSM
265]
Length = 246
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 89/224 (39%), Gaps = 19/224 (8%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ + + + L + L++ L+ +R +S IV+LG T IP
Sbjct: 30 RRWLVWMGIGLLWLMSIPAAGDGLMRVLEGPGRRVAVSS--IAPAEAIVVLGGMTLQIPG 87
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD--PQKHGLAESIVYNNKLL 139
P+ + R + L+++ + ++ +GG +++ E + + +
Sbjct: 88 APSGEW---GDAADRFEAGVDLFRAGR----APLLVFTGGRLPWRENFEPEGELLRRRAV 140
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV D +++ + +T + ++ K IILV+SA+H+ RS F+ G
Sbjct: 141 LLGVPADGVRVTGIAGNTA--EEARAAARLLGPNKRIILVTSAFHMTRSLRLFRSAGFTV 198
Query: 200 KASCSDY------LNAYYSIIPLSANFYLTELALKEYIGILIAY 237
DY + S IP L+ AL+E +GI +
Sbjct: 199 VPFRVDYRVQPSTRTSILSFIPDPEALLLSFTALREMMGIAWYH 242
>gi|262281176|ref|ZP_06058958.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262257407|gb|EEY76143.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 261
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 88/240 (36%), Gaps = 24/240 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY---QRPL 57
++ + + L + + FF + GW + L+ L + + +
Sbjct: 36 IIPLILGAFFCLYSLFYYHLERFFFYHYRLHTLWRFGWLCLWIWLI-SLGYFFDFIKENK 94
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ Q N I++LG+G +PS R+ + + ++
Sbjct: 95 ETSQNLPPVNAIIVLGSGVEN--------GQPSKTLAKRLDTAAPIA----LKQLQAKVV 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--- 173
++GG +E++V + L + + ++ + LE +S T N + S ++
Sbjct: 143 VTGGLDFSEKESEALVMSRYLEQHYHLAKERMILEDKSTSTELNLKNSKPLLAQHHITLD 202
Query: 174 KNIILVSSAYHLKRSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ I +V+S +H R+ + G + T A+ + Y S + F + EY
Sbjct: 203 QPIAIVTSDFHTPRAAAIAKKQGYTQVYTVAAETPLATRYNSWLREYFAFA-SGWFFNEY 261
>gi|50842156|ref|YP_055383.1| hypothetical protein PPA0669 [Propionibacterium acnes KPA171202]
gi|289426845|ref|ZP_06428571.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|295130244|ref|YP_003580907.1| hypothetical protein HMPREF0675_3738 [Propionibacterium acnes
SK137]
gi|50839758|gb|AAT82425.1| hypothetical protein PPA0669 [Propionibacterium acnes KPA171202]
gi|289159934|gb|EFD08112.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|291375530|gb|ADD99384.1| conserved hypothetical protein [Propionibacterium acnes SK137]
gi|313763888|gb|EFS35252.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
gi|313771407|gb|EFS37373.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
gi|313808239|gb|EFS46713.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
gi|313811298|gb|EFS49012.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
gi|313814824|gb|EFS52538.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
gi|313819005|gb|EFS56719.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
gi|313820836|gb|EFS58550.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
gi|313822403|gb|EFS60117.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
gi|313825802|gb|EFS63516.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
gi|313828147|gb|EFS65861.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
gi|313830950|gb|EFS68664.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
gi|313833376|gb|EFS71090.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
gi|314915093|gb|EFS78924.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
gi|314918753|gb|EFS82584.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
gi|314920554|gb|EFS84385.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
gi|314925593|gb|EFS89424.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
gi|314932228|gb|EFS96059.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
gi|314954656|gb|EFS99062.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
gi|314958523|gb|EFT02625.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
gi|314959880|gb|EFT03982.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
gi|314968297|gb|EFT12396.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
gi|314973834|gb|EFT17930.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
gi|314976488|gb|EFT20583.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
gi|314979234|gb|EFT23328.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
gi|314983400|gb|EFT27492.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
gi|314986818|gb|EFT30910.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
gi|314989379|gb|EFT33470.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
gi|315080102|gb|EFT52078.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
gi|315083984|gb|EFT55960.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
gi|315085185|gb|EFT57161.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
gi|315089022|gb|EFT60998.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
gi|315096455|gb|EFT68431.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
gi|315099022|gb|EFT70998.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
gi|315100897|gb|EFT72873.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
gi|315107172|gb|EFT79148.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
gi|315108116|gb|EFT80092.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
gi|327326860|gb|EGE68643.1| hypothetical protein HMPREF9338_01734 [Propionibacterium acnes
HL096PA2]
gi|327442936|gb|EGE89590.1| hypothetical protein HMPREF9570_02441 [Propionibacterium acnes
HL043PA1]
gi|327445060|gb|EGE91714.1| hypothetical protein HMPREF9571_02045 [Propionibacterium acnes
HL043PA2]
gi|327447433|gb|EGE94087.1| hypothetical protein HMPREF9568_00729 [Propionibacterium acnes
HL013PA2]
gi|327450039|gb|EGE96693.1| hypothetical protein HMPREF9581_02486 [Propionibacterium acnes
HL087PA3]
gi|327455410|gb|EGF02065.1| hypothetical protein HMPREF9586_01447 [Propionibacterium acnes
HL083PA2]
gi|328752707|gb|EGF66323.1| hypothetical protein HMPREF9579_02249 [Propionibacterium acnes
HL087PA1]
gi|328752927|gb|EGF66543.1| hypothetical protein HMPREF9563_02180 [Propionibacterium acnes
HL020PA1]
gi|328759376|gb|EGF72992.1| hypothetical protein HMPREF9588_00221 [Propionibacterium acnes
HL025PA2]
gi|328760301|gb|EGF73872.1| hypothetical protein HMPREF9343_01965 [Propionibacterium acnes
HL099PA1]
gi|332675082|gb|AEE71898.1| hypothetical protein PAZ_c07120 [Propionibacterium acnes 266]
Length = 349
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 101/274 (36%), Gaps = 57/274 (20%)
Query: 2 LLSWIFLI--VSYWHLLCQSIRKIFFMSCFMLLFSFIGW---------------GIIPTI 44
+L ++ ++ V W +S+ + + + L + W GI T+
Sbjct: 72 VLPFLLIVNGVEMWRKEGRSLSNVLSGALGVGLLVLMAWCLRSVFSPFEPWAVAGISATM 131
Query: 45 LLKHLQFSYQRPLLS------PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
L L F + L S + + IV+LG+ + SR+
Sbjct: 132 ALGWLSFGFLGYLASVFVIHRAKPLPGNHQIVVLGSALVKGKVPKLL--------ASRLD 183
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
+ +++ + H II SGG AE L+E G+ R+ + +E Q+ +T
Sbjct: 184 RGIGQWRTDRDAGFHSVIIPSGGKGDDEPRAEGEAMAEYLVEHGIPRECVVVENQAANTD 243
Query: 159 QNAQFSSSMI---------------KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+N S ++ + Q +++ +S+YH R+ + G+ +
Sbjct: 244 ENISLSRQVMPTQVRSVPSRRAEAARQRQNPQVVVATSSYHAVRAAELCRRQGLRVRVLG 303
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ +A ++L L+EYI +L +
Sbjct: 304 AP-----------TATYFLPSAMLREYIALLASR 326
>gi|262368832|ref|ZP_06062161.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262316510|gb|EEY97548.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 259
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 78/227 (34%), Gaps = 41/227 (18%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + IFF+ F L+ F+ G + +P IV+LG+G
Sbjct: 66 IWRWAWAIFFVWVFSLVIFFVFLG-------------FSNQQNTP--HVAAPAIVVLGSG 110
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+PS SR+ + K + +++SGG + +E+
Sbjct: 111 LK--------HGKPSPTLASRLDQAANYAK----LHPNSIVVVSGGLSFQQKNSEAEAMR 158
Query: 136 NKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSSAYHLKRSQLY 191
L++ + I E QS T N S ++ + I +V+S +H+ RS+
Sbjct: 159 QYLIDVHHIPAQRIYTEDQSTSTELNLINSKKILAKQHISLQQPIAIVTSDFHIPRSRAI 218
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G T S PL+ + L+EY +
Sbjct: 219 AIRQGYQTPIMISAQT-------PLATRY---NAWLREYFAYWSGWL 255
>gi|298370494|ref|ZP_06981810.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281954|gb|EFI23443.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 220
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 22/199 (11%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
F + + L + + +S ++L F G Y+ +
Sbjct: 3 FPLFHSRNGLRFYLLRGIALSILLVLAVFAGNVW----------QVYRTGNQTLPAAATA 52
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ V+LG A +PS RI + LY+S + I+ +GG P+K
Sbjct: 53 DAAVVLGA--------AAWNKQPSPVFLERINHAIALYQSHRVG----KIVFTGGTPKKG 100
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ E+ V L+ G+ +I E S +T++N + +++ +II+VS YHL
Sbjct: 101 YMTEAEVGRRYALKQGIPAKNILFENTSRNTYENLRNIKPILRANSVDSIIIVSDPYHLA 160
Query: 187 RSQLYFQHFGINTKASCSD 205
R+Q + +N + S +
Sbjct: 161 RAQAIARDLDLNAEVSATP 179
>gi|289426184|ref|ZP_06427930.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|289153349|gb|EFD02064.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|313791546|gb|EFS39664.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
gi|313802367|gb|EFS43593.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
gi|313812480|gb|EFS50194.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
gi|313838950|gb|EFS76664.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
gi|314962443|gb|EFT06544.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
gi|315077359|gb|EFT49419.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
gi|327455232|gb|EGF01887.1| hypothetical protein HMPREF9584_01188 [Propionibacterium acnes
HL092PA1]
Length = 349
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 101/274 (36%), Gaps = 57/274 (20%)
Query: 2 LLSWIFLI--VSYWHLLCQSIRKIFFMSCFMLLFSFIGW---------------GIIPTI 44
+L ++ ++ V W +S+ + + + L + W GI T+
Sbjct: 72 VLPFLLIVNGVEMWRKEGRSLSNVLSGALGVGLLVLMAWCLRSVFSPFERWAVAGISATM 131
Query: 45 LLKHLQFSYQRPLLS------PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
L L F + L S + + IV+LG+ + SR+
Sbjct: 132 ALGWLSFGFLGYLASVFVIHRAKPLPGNHQIVVLGSALVKGKVPKLL--------ASRLD 183
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
+ +++ + H II SGG AE L+E G+ R+ + +E Q+ +T
Sbjct: 184 RGIGQWRTDRDAGFHSVIIPSGGKGDDEPRAEGEAMAEYLVEHGIPRECVVVENQAANTD 243
Query: 159 QNAQFSSSMI---------------KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+N S ++ + Q +++ +S+YH R+ + G+ +
Sbjct: 244 ENISLSRQVMPTQVRSVPSRRAEAARQRQNPQVVVATSSYHAVRAAELCRRQGLRVRVLG 303
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ +A ++L L+EYI +L +
Sbjct: 304 AP-----------TATYFLPSAMLREYIALLASR 326
>gi|312877810|ref|ZP_07737760.1| protein of unknown function DUF218 [Caldicellulosiruptor
lactoaceticus 6A]
gi|311795436|gb|EFR11815.1| protein of unknown function DUF218 [Caldicellulosiruptor
lactoaceticus 6A]
Length = 195
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 12/137 (8%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K + I++LG PS R+ LYK II+ G
Sbjct: 35 PKKSDCIIVLGCAVYGD--------FPSPFFRERLNRAFELYKKGYARY----IIVCGAK 82
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ L+E GV + I E +S T++N +S ++ K+ I+VS+
Sbjct: 83 GPGENISEAEAGKRYLVERGVLPELILKEDKSFSTYENLLYSKRIMNKKGFKSAIIVSNM 142
Query: 183 YHLKRSQLYFQHFGINT 199
+HL+R+ L + +N
Sbjct: 143 FHLRRASLIAKKLKMNA 159
>gi|153814458|ref|ZP_01967126.1| hypothetical protein RUMTOR_00671 [Ruminococcus torques ATCC 27756]
gi|317500172|ref|ZP_07958405.1| hypothetical protein HMPREF1026_00347 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087601|ref|ZP_08336529.1| hypothetical protein HMPREF1025_00112 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145848854|gb|EDK25772.1| hypothetical protein RUMTOR_00671 [Ruminococcus torques ATCC 27756]
gi|316898461|gb|EFV20499.1| hypothetical protein HMPREF1026_00347 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330399780|gb|EGG79440.1| hypothetical protein HMPREF1025_00112 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 242
Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats.
Identities = 47/259 (18%), Positives = 94/259 (36%), Gaps = 42/259 (16%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLF----SFIGWGIIPT-------ILLKHL 49
+L S L + + +R F + F LL F G +P + L
Sbjct: 7 ILGSLCVLYYLILVIYSRRLRSTF--AVFWLLTGGAHLFFGCVPLPAYVESVFGWICLGL 64
Query: 50 QFSYQRPLLS------PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
+ + + ++ I++LG +R S R +
Sbjct: 65 WILFLTVEIKICLGMFSKPERGAQWIIILGA---------QVRGRKITDSLKRRLDAAIH 115
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
Y + +M +++SGG ++E+ L+E GV + I+ E QS+ T +N F
Sbjct: 116 YLEENERTM---VVVSGGRGPGEDISEADAMEQYLIEQGVAENRIRKEDQSVSTRENLSF 172
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLT 223
S I + + +V++ +H R++L + G +S+ S +
Sbjct: 173 SRRFIDPKH-ETVGIVTNNFHSYRAKLLAEQEGYAHV----------FSVSASSNYVFQI 221
Query: 224 ELALKEYIGILIAYYRGNR 242
++E+ +L + + R
Sbjct: 222 NYLVREFFAVLAIFLKNKR 240
>gi|154500224|ref|ZP_02038262.1| hypothetical protein BACCAP_03888 [Bacteroides capillosus ATCC
29799]
gi|150270956|gb|EDM98230.1| hypothetical protein BACCAP_03888 [Bacteroides capillosus ATCC
29799]
Length = 230
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 87/221 (39%), Gaps = 28/221 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + + + ++ I + I+ I+ + +++LG
Sbjct: 12 GKKLHPVLRVIVGLIGLGLICFAILAAIVYAG---------ERTSMQGTPKAMIILGC-- 60
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ PS R+ + +I+SGG ++E+ +
Sbjct: 61 ------KVEKSGPSQLLRDRLDTALDYLNGLDSP---IPVIVSGGQGLDEPVSEAASMAD 111
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN----IILVSSAYHLKRSQLYF 192
L+E+G D I LE S +T +N +S ++++++ I++VS+ +HL R+++
Sbjct: 112 YLIEAGYSDDYIYLEDNSHNTAENLGYSVALLESLSLDPAEDEILIVSNGFHLTRARMLA 171
Query: 193 QHFG---INTKASCSDYLNAYYS-IIPLSANFYLTELALKE 229
+ FG ++T A+ S +L + S + L +E
Sbjct: 172 ERFGYGHVSTLAAPSSHLPSRISMFFREPLALVKSFLLDRE 212
>gi|119469525|ref|ZP_01612429.1| hypothetical protein ATW7_06698 [Alteromonadales bacterium TW-7]
gi|119447060|gb|EAW28330.1| hypothetical protein ATW7_06698 [Alteromonadales bacterium TW-7]
Length = 258
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/239 (17%), Positives = 91/239 (38%), Gaps = 17/239 (7%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
F +++ + + + I + +LK+ + + P +
Sbjct: 24 FFALIALFLAFKGRKFSLVIAFFGLSTLLAISTPFVANQILKNNEPTSLS--FHPSKYPE 81
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ IV+LG P + A + + +R+ E ++L K + +I+SGG
Sbjct: 82 LDKIVVLGCDINPNPVLSAN-NQLGNCALTRLVEGVKLAKYYPKSQ----LIVSGG--GY 134
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+ S + +E G+ ++ + +++DT Q A + + + + LV+S H+
Sbjct: 135 ENITNSSLMYQTAIELGINKNRLLQNPKAMDTAQEAALLAPKLVDF---KVALVTSVLHM 191
Query: 186 KRSQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+Q F G+ T + +D+ L + ++P + E +G R
Sbjct: 192 PRAQDLFLAQGVITIPAATDFHNFSALPFHKQLVPNAQALLAVTQYSHEVVGTTWIKVR 250
>gi|319788557|ref|YP_004148032.1| hypothetical protein Psesu_2977 [Pseudoxanthomonas suwonensis 11-1]
gi|317467069|gb|ADV28801.1| protein of unknown function DUF218 [Pseudoxanthomonas suwonensis
11-1]
Length = 202
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 71/193 (36%), Gaps = 17/193 (8%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ IL ++ + + ++I++LG A PS RI
Sbjct: 20 VLAILWLGGVAAWINWVGHRDQAQRADVIIVLGA--------AAYDARPSPVFEERIRHG 71
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
+ LY++ ++ +GG AES V + G+ + I +ET S T QN
Sbjct: 72 LNLYRA----GYAPVLLFTGGYGTGARFAESQVAQRYAVRQGIPEEAILIETASRTTLQN 127
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIP 215
+ +++ Q + I+VS H+ R+ + GI S + + +
Sbjct: 128 LLQARELMRERQLHSAIIVSDPLHMSRALRLCRQLGIEATGSPTPSTRFRSFQTQWKFLL 187
Query: 216 LSANFYLTELALK 228
F+ +L +
Sbjct: 188 QEVYFFHRDLVAR 200
>gi|299768888|ref|YP_003730914.1| hypothetical protein AOLE_03200 [Acinetobacter sp. DR1]
gi|298698976|gb|ADI89541.1| hypothetical protein AOLE_03200 [Acinetobacter sp. DR1]
Length = 261
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 86/245 (35%), Gaps = 30/245 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ---RPL 57
++ + + L + + FF + F GW L+ L + +
Sbjct: 36 IIPFILGTFFCLYSLFYYHLERFFFYHYRLHTFWRFGWLCFWIWLI-GLGYFFSFIKENK 94
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ I++LG+G +PS R+ L +Q ++
Sbjct: 95 DTSDNIPPVRAIIVLGSGVEN--------GQPSKILAKRLDTAAPLALKQQQ----AKVV 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--- 173
++GG +E++V + L + + ++ + LE +S T N + S ++
Sbjct: 143 LTGGLDFSEKESEALVMSRYLQQKYHIAKERMILEDKSTSTELNLKNSQPLLAQQHINLN 202
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ I +V+S +H+ R+ + G + + PL+ + L+EY
Sbjct: 203 QPIAIVTSDFHIPRAVAIAKKQGYT-------QVYGVAAETPLATRY---NAWLREYFAY 252
Query: 234 LIAYY 238
+
Sbjct: 253 ASGWL 257
>gi|75911018|ref|YP_325314.1| hypothetical protein Ava_4822 [Anabaena variabilis ATCC 29413]
gi|75704743|gb|ABA24419.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 215
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 17/179 (9%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
F +L + I + +SY + + + ++LG P R
Sbjct: 24 LFWILITIISALLFAISSTAISIYSYG----NSSYNNKADAAIVLGAAVWGEEPSPVFR- 78
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
RI + LYK + II +GG + + AE+IV + GV+ D
Sbjct: 79 -------ERINHAINLYK----NGAISKIIFTGGVGEINEPAEAIVGKHYATARGVKTAD 127
Query: 148 IKLETQSLDTFQNAQFSSSMIK-NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I ETQS T+QN + + ++ N + +++S HLKR+ L ++ GI+ S +
Sbjct: 128 IITETQSRTTYQNLKNAIEVVDTNEKFTKFLIISDPLHLKRAVLMARNLGIDAYPSPTP 186
>gi|262371782|ref|ZP_06065061.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262311807|gb|EEY92892.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 261
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 84/230 (36%), Gaps = 29/230 (12%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
F ++H SI + F +CF + +G +L + Q+P Q +
Sbjct: 55 FERFFFYHFRLHSIWR-FAWACFWIWIISLG------YFFNYLTDNNQKP----QSIQPV 103
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
I++LG G +PS R+ L K +I+SGG
Sbjct: 104 KAIIVLGTGIEN--------GQPSATLAKRLDRAAPLAK----VQPDAKVIVSGGIDFGE 151
Query: 127 GLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSSA 182
+E+I+ + L + + I LE +S T N + S ++ + I +V+S
Sbjct: 152 KDSEAIIMSRYLQQKHQIPATQILLEDKSTSTELNLKNSQPLLSAHHITLQQPIAIVTSD 211
Query: 183 YHLKRSQLYFQHFGI--NTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+H R+Q + G + L+ Y+ Y + L EY
Sbjct: 212 FHTLRAQAIAKKQGYTQTILLGSTTPLSTRYNAWLREYFAYASGWILNEY 261
>gi|152975811|ref|YP_001375328.1| hypothetical protein Bcer98_2067 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152024563|gb|ABS22333.1| protein of unknown function DUF218 [Bacillus cytotoxicus NVH
391-98]
Length = 209
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 75/189 (39%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+S ++ +++ S I + + + ++ K D + V+LG
Sbjct: 5 KKSKKRRVLQVFLLMISSMILFVSYAAYDIWS--YRFKTD------KVDTDAAVVLGA-- 54
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
A +PS RI + LY++ II +GG + L E+
Sbjct: 55 ------AAWNGKPSPVFRERINHAISLYQNGNIK----KIIFTGGTKFEAELEEARTAKA 104
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+ V+ +DI +ET+S T N + + + + +VS H+KR+ +H G
Sbjct: 105 YALKRNVKDEDILIETKSRFTEDNLKNAKQVGMEHGLQTYTIVSDPLHMKRAMQIAKHIG 164
Query: 197 INTKASCSD 205
++ AS +
Sbjct: 165 MDAYASPTP 173
>gi|210623051|ref|ZP_03293538.1| hypothetical protein CLOHIR_01488 [Clostridium hiranonis DSM 13275]
gi|210153854|gb|EEA84860.1| hypothetical protein CLOHIR_01488 [Clostridium hiranonis DSM 13275]
Length = 251
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/244 (16%), Positives = 94/244 (38%), Gaps = 36/244 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L I L+ + + R ++ + + I + + +++ +
Sbjct: 33 VLGTICLVYHFTRDKIKKHRWLYMIVKICAAVAIIIFVTVEGMIIA----------FPKK 82
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++ + I++LG + EP R+ + KS C I++SGG
Sbjct: 83 STENCDYIIVLGA--------RVMGNEPGLTLKGRLDRALEYVKSNDD---DCKIVVSGG 131
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-----GKNI 176
++E+ L+E G++ + I E +S++T QN +FS I+N ++
Sbjct: 132 KGDGENISEAEAMKRYLVERGIKPEMIIKEDKSVNTMQNFEFSRDKIENDSKKKVADVDV 191
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+V++ +H RS Y + G + ++ + + + ++E+ I+
Sbjct: 192 KVVTTDFHAFRSDKYAKMDGYKNISFYTE----------RTKWYLIPVFYVREFFAIIKM 241
Query: 237 YYRG 240
G
Sbjct: 242 MLVG 245
>gi|115372876|ref|ZP_01460181.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|310818526|ref|YP_003950884.1| hypothetical protein STAUR_1253 [Stigmatella aurantiaca DW4/3-1]
gi|115370143|gb|EAU69073.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|309391598|gb|ADO69057.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 210
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 18/174 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ +++V+LG PS +R+ + + LY + ++ SG
Sbjct: 42 ERAAPADVLVVLGA-------RVLPGGVPSGALLARVEKAVALYHQ----GLASRLLFSG 90
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + +E+ V + GV + LE QS T QNA+FS+ +++ + + +++VS
Sbjct: 91 GVGV-NPPSEAQVMRALAVRLGVPAEACFLEEQSHSTEQNARFSAQVLRALGAERVVVVS 149
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
YHL R++ YF+ G S + + + FY T ++E +L
Sbjct: 150 DPYHLLRARQYFRLEGWEVATSPA---LLTERNLHAADRFYWT---VREAFALL 197
>gi|227529308|ref|ZP_03959357.1| conserved hypothetical protein [Lactobacillus vaginalis ATCC 49540]
gi|227350736|gb|EEJ41027.1| conserved hypothetical protein [Lactobacillus vaginalis ATCC 49540]
Length = 315
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 80/179 (44%), Gaps = 25/179 (13%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ ++ LG G P + ++ +C + + + TII++GG
Sbjct: 143 PVKADYLIALGAGLRQGKVPPV------------LTARLQQAIACWKLNHNATIIVTGGI 190
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVS 180
L+E+ L+ G+ +D I LE Q+++T+ N + +++ + I++++
Sbjct: 191 LHGEQLSEAQAMAKYLINHGIPQDRIILEEQAMNTWDNLRNCQRLLQKQADPKQKIVVIT 250
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S++H+ R+ Y + ++ S + + PL+ +++Y+GI+ +YR
Sbjct: 251 SSFHIFRTFNYLRKLKLSWPLVSS---KTPWKLQPLT--------VVRDYLGIIRDHYR 298
>gi|225869237|ref|YP_002745185.1| membrane protein [Streptococcus equi subsp. zooepidemicus]
gi|225702513|emb|CAX00445.1| putative membrane protein [Streptococcus equi subsp. zooepidemicus]
Length = 327
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 99/257 (38%), Gaps = 48/257 (18%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFS--FIGWGII---------------PT 43
+LL F + S R + + +LLF FI ++
Sbjct: 65 LLLFLSFNGIRLIKREGLSFRNLLLIGSAVLLFVHPFISRLLLESIGDSKLLRIMYETSD 124
Query: 44 ILLKHLQFSYQRPLLSPQW------KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+L+ +L +S K + I++LG+G P + SRI
Sbjct: 125 LLIFYLLLIVSVYTISSMLNTFYLRKTKEDYIIVLGSGLNGDQVTPLL--------ASRI 176
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ +++Y+ + +I+SGG +AE ++ G++ +DI +E QS +T
Sbjct: 177 NKGIQVYR----KNPGSKLIMSGGKGADELIAEGEAMCRYAVQQGIKSEDILVENQSRNT 232
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
+N FS +I G + LV++ YHL R+ L + + + + +
Sbjct: 233 RENILFSKQLIPA--GASFCLVTNRYHLFRALLLAKELALPCRGYGA-----------KT 279
Query: 218 ANFYLTELALKEYIGIL 234
++ ++E +G L
Sbjct: 280 KLYFSMNAFIREIVGYL 296
>gi|269120749|ref|YP_003308926.1| hypothetical protein Sterm_2141 [Sebaldella termitidis ATCC 33386]
gi|268614627|gb|ACZ08995.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 346
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 16/142 (11%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K+ + IV LG T+ + I+ Q+Y E RL + + II++GG
Sbjct: 173 NKNADFIVTLGYALNNDGTMNEVLIKRLEQTY----EAARL-------NPNANIIVTGG- 220
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
QK GL ES + N L+E G+ D + +E ++ DT +NA +S+ ++K K +IL++SA
Sbjct: 221 VQKGGLTESYLMKNWLVEKGIAADRVIIEDKARDTVENAIYSTEILKKYNPKRVILITSA 280
Query: 183 YHLKR--SQL--YFQHFGINTK 200
H++R + L + G+
Sbjct: 281 SHIRRGTALLQEAADNAGLKIT 302
>gi|226309010|ref|YP_002768970.1| hypothetical protein RER_55230 [Rhodococcus erythropolis PR4]
gi|226188127|dbj|BAH36231.1| hypothetical protein RER_55230 [Rhodococcus erythropolis PR4]
Length = 242
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 12/143 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
G IV+LG G T+ + + R+ ++L + Q II SG
Sbjct: 106 DLNPVGTNIVVLGAGLFDDGTMRPMLV-------DRLQAALQLARQYPQS----PIITSG 154
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P+ G+ E+ L+ +GV+ I E S T +NA S+ ++ + +++VS
Sbjct: 155 GAPKA-GVTEARAMREWLVANGVDPGRITEEGTSWSTVENALNSARILADRGATGVVVVS 213
Query: 181 SAYHLKRSQLYFQHFGINTKASC 203
SA H++R+ + F+ +
Sbjct: 214 SANHVERAMVDFRVAVLGRIPVA 236
>gi|126737417|ref|ZP_01753152.1| hypothetical protein RSK20926_13319 [Roseobacter sp. SK209-2-6]
gi|126722002|gb|EBA18705.1| hypothetical protein RSK20926_13319 [Roseobacter sp. SK209-2-6]
Length = 197
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 22/177 (12%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
I ++LG P P+ + R + L+K+ K + C SGG KH
Sbjct: 37 TIAIILGA-----AVWPGGEASPTLRR--RTLHGVALFKAGKISQLIC----SGGLG-KH 84
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+E+ V L G+ D I LE +S T +N + ++I++ + +I++V+ YH
Sbjct: 85 PPSEAAVMREICLAEGLPTDAILLEDRSHSTLENLTNAKALIEDPETTDIVIVTDHYHKW 144
Query: 187 RSQLYFQHFGINTKAS-CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
R+ L +H G+ T+ S S ++ ++ L+E + Y+R R
Sbjct: 145 RALLTARHLGLRTRVSCPSTTGTTWHRVLKSW---------LREIPALAYYYWRLKR 192
>gi|167757814|ref|ZP_02429941.1| hypothetical protein CLOSCI_00145 [Clostridium scindens ATCC 35704]
gi|167664468|gb|EDS08598.1| hypothetical protein CLOSCI_00145 [Clostridium scindens ATCC 35704]
Length = 196
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG-NIIVLLGNGTTIIPTIPAIRIEP 89
LL+ +G+ + L L F + +W++D + V+ G P
Sbjct: 8 LLWITLGFAA-ANLALFGLMFRKPKK----RWEQDAYDCAVVCGC-------QVGADGTP 55
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S + +R+ + + L+K K +I+SG + AE+ +E GV + I
Sbjct: 56 SKRLAARVEKAVELWKDKKVKY----LIMSG-AAVYNAFAEAPAMKRYAVELGVPEEYIL 110
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
E Q++ T+ N ++S M+++ K+ ++V++ +HL+++ Y + G+ + S
Sbjct: 111 EEKQAVSTYHNLLYASQMMEHCGFKDCVVVTNGWHLRKADHYARKAGVKYVMAASK--RP 168
Query: 210 YYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + YL + Y+ + YY
Sbjct: 169 EGDSLLTTIGLYLKTN-IHMYVNMWKGYY 196
>gi|169628519|ref|YP_001702168.1| hypothetical protein MAB_1428 [Mycobacterium abscessus ATCC 19977]
gi|169240486|emb|CAM61514.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length = 188
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 12/137 (8%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G ++P ++++ + ++ + II++GG+PQ +G
Sbjct: 42 AIVILGYG-----------LKPDGSMRDKLYQRVATGRAIANMFPNSFIIVTGGNPQ-NG 89
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++E+ N L+ G D I +E ++ T QNAQFS + K IILV+++ H +R
Sbjct: 90 VSEADQMRNMLVGLGYPSDRIIVEPRANSTVQNAQFSVPLAKQAGASGIILVTNSTHQQR 149
Query: 188 SQLYFQHFGINTKASCS 204
+ F G N A+ S
Sbjct: 150 ADRNFADAGGNVLATAS 166
>gi|317131219|ref|YP_004090533.1| protein of unknown function DUF218 [Ethanoligenens harbinense
YUAN-3]
gi|315469198|gb|ADU25802.1| protein of unknown function DUF218 [Ethanoligenens harbinense
YUAN-3]
Length = 255
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 45/229 (19%), Positives = 83/229 (36%), Gaps = 24/229 (10%)
Query: 3 LSWIFLIVSYW--HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++ IFL W LC ++ + +GW ++ ++ L S+ P
Sbjct: 44 VAIIFLPALLWVLRRLCGRYARVVLRLLAAACIAGLGWLLLSFGVI--LAHSF------P 95
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+V+LG PS RI K+ Q I SG
Sbjct: 96 GQPPQDATVVVLGA--------KVQGRTPSIDLMGRIDAAGTYLKAHPQAFC----IASG 143
Query: 121 GDPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIIL 178
G + + E+ + L++ + I L+ S +T QN + + ++I+ ++ L
Sbjct: 144 GKGPEEDITEAESIRDTLVQRHGIAPARIALDDTSTNTVQNLRNARTIIRQRGLPVHVAL 203
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
VS +HL R+ + + G+ +D + L F L + L
Sbjct: 204 VSDGFHLFRAGIIAKRQGLEPFGVPADTDWRLNGYLYLREIFALPKTLL 252
>gi|224542305|ref|ZP_03682844.1| hypothetical protein CATMIT_01484 [Catenibacterium mitsuokai DSM
15897]
gi|224524754|gb|EEF93859.1| hypothetical protein CATMIT_01484 [Catenibacterium mitsuokai DSM
15897]
Length = 210
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 40/232 (17%), Positives = 82/232 (35%), Gaps = 32/232 (13%)
Query: 10 VSYWHLLC---QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
+ W + + ++K+ + ++ + F I K ++
Sbjct: 1 MFLWRIFSSAMKILKKLIIIVALVICYVFSNAVSIYIYSFK-------------DDARNA 47
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++ ++LG T PS RI + LY + II++GG + +
Sbjct: 48 DVAIVLGASTYN--------GHPSPVYQERINHAVDLYNKH----LVKKIIMTGGYGKGN 95
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
++++ + GV DD+ E QS T +N + ++ + ++VS H+K
Sbjct: 96 PVSDAYNAKLYAVSQGVPEDDVLTEDQSTVTLENLINAKKIMDVYNYQTALIVSDPLHMK 155
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
R+ L + GI S + + +L + YIG
Sbjct: 156 RAMLQAKDAGIIAYTSPTHSSRFRTR---DTKFKFLKREVIN-YIGYKWYRL 203
>gi|302671055|ref|YP_003831015.1| hypothetical protein bpr_I1696 [Butyrivibrio proteoclasticus B316]
gi|302395528|gb|ADL34433.1| hypothetical protein bpr_I1696 [Butyrivibrio proteoclasticus B316]
Length = 265
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 87/243 (35%), Gaps = 42/243 (17%)
Query: 1 MLLSWIFLI--VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+ ++F++ W + +++R F + F + IL
Sbjct: 60 LFFGFLFVMDQKKLWSRVPKAVRYAFRTVVVAGVLVFTICQV--CILTAFF--------- 108
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ + I++LG PS R+ + + ++ +++
Sbjct: 109 -SKGAPGADYIIVLGA--------QMRSSGPSIIYKYRLNSAIEYLR----NNPDTKVVV 155
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+GG ++E L+E + D I +E+ SLDT +N + +I + I +
Sbjct: 156 TGGQGSNEPISEGEGGKIYLMEKEISEDRIIVESTSLDTDENIVNAMKLINPDKDMTIGI 215
Query: 179 VSSAYHLKRSQLYFQH---FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
V++ +HL R + + I A+ ++Y +L ++E GIL
Sbjct: 216 VTNNFHLFRGMMLARRHTDAEITGIAAFTEYQ-------------FLPNNMVRETFGILK 262
Query: 236 AYY 238
Y
Sbjct: 263 DIY 265
>gi|325123318|gb|ADY82841.1| putative SanA protein [Acinetobacter calcoaceticus PHEA-2]
Length = 261
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/245 (16%), Positives = 86/245 (35%), Gaps = 30/245 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ---RPL 57
++ + + L + + FF + GW L+ L + +
Sbjct: 36 VIPLILGAFFCLYSLFYYHLERFFFYHYRLHTLWRFGWLCFWIWLI-GLGYFFSFIKENK 94
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ I++LG+G +PS R+ L +Q I+
Sbjct: 95 DTSNNIPPVKAIIVLGSGVEN--------GQPSTILAKRLDTAAPLALKQQQ----AQIV 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--- 173
++GG +E++V + L + + RD + LE +S T N + S +++
Sbjct: 143 LTGGLDFSEKESEALVMSRYLEQKYHIARDQMILEDKSTSTELNLKNSKPLLEQHHITLD 202
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ I +V+S +H+ R+ + G + + PL+ + L+EY
Sbjct: 203 QPIAIVTSDFHIPRAIAIAKKQGYT-------QVYGIAAETPLATRY---NAWLREYFAY 252
Query: 234 LIAYY 238
+
Sbjct: 253 ASGWL 257
>gi|195977434|ref|YP_002122678.1| hypothetical protein Sez_0289 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195974139|gb|ACG61665.1| hypothetical protein Sez_0289 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 342
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 99/257 (38%), Gaps = 48/257 (18%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFS--FIGWGII---------------PT 43
+LL F + S R + + +LLF FI ++
Sbjct: 80 LLLFLSFNGIRLIKREGLSFRNLLLIGSAVLLFVHPFISRLLLESIGDSKLLRIMYETSD 139
Query: 44 ILLKHLQFSYQRPLLSPQW------KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+L+ +L +S K + I++LG+G P + SRI
Sbjct: 140 LLIFYLLLIVSVYTISSMLNTFYLRKTKEDYIIVLGSGLNGDQVTPLL--------ASRI 191
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ +++Y+ + +I+SGG +AE ++ G++ +DI +E QS +T
Sbjct: 192 NKGIQVYR----KNPGSKLIMSGGKGADELIAEGEAMCRYAVQQGIKSEDILVENQSRNT 247
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
+N FS +I G + LV++ YHL R+ L + + + + +
Sbjct: 248 RENILFSKQLIPA--GASFCLVTNRYHLFRALLLAKELALPCRGYGA-----------KT 294
Query: 218 ANFYLTELALKEYIGIL 234
++ ++E +G L
Sbjct: 295 KLYFSMNAFIREIVGYL 311
>gi|254975478|ref|ZP_05271950.1| hypothetical protein CdifQC_09212 [Clostridium difficile QCD-66c26]
gi|255092865|ref|ZP_05322343.1| hypothetical protein CdifC_09464 [Clostridium difficile CIP 107932]
gi|255314608|ref|ZP_05356191.1| hypothetical protein CdifQCD-7_09675 [Clostridium difficile
QCD-76w55]
gi|255517281|ref|ZP_05384957.1| hypothetical protein CdifQCD-_09254 [Clostridium difficile
QCD-97b34]
gi|255650388|ref|ZP_05397290.1| hypothetical protein CdifQCD_09414 [Clostridium difficile
QCD-37x79]
gi|260683502|ref|YP_003214787.1| hypothetical protein CD196_1762 [Clostridium difficile CD196]
gi|260687098|ref|YP_003218231.1| hypothetical protein CDR20291_1737 [Clostridium difficile R20291]
gi|306520344|ref|ZP_07406691.1| hypothetical protein CdifQ_10684 [Clostridium difficile QCD-32g58]
gi|260209665|emb|CBA63373.1| putative membrane protein [Clostridium difficile CD196]
gi|260213114|emb|CBE04521.1| putative membrane protein [Clostridium difficile R20291]
Length = 248
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFM--LLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
S IFL+V ++ Q +K +L I +I ++ + L Y + L
Sbjct: 29 FSEIFLVVGIVLIIYQIFKKKIKEKKVFYRVLKIIISIFLIVFVVTESLIIFYPKNSLES 88
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +++LG + PS R+ ++ K + +C +++SG
Sbjct: 89 KS----DYLLILGA--------SVKKTTPSTTLKGRLDTALKYLK----INDNCYVVVSG 132
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-----N 175
G + E+ + L+++ ++++ I E +S +T++N ++S I+ +
Sbjct: 133 GKGSGEKITEAKAMKDYLIKNSIDKNRIIEEDKSTNTYENFKYSKLKIEEHSQRKLSDLK 192
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
+ +V++ +H+ RS++ G + + + S +P
Sbjct: 193 VKIVTTDFHVLRSKILAYRNGYKNTSFYAS--KSKLSFVPTYY 233
>gi|309775431|ref|ZP_07670434.1| putative periplasmic protein [Erysipelotrichaceae bacterium 3_1_53]
gi|308916820|gb|EFP62557.1| putative periplasmic protein [Erysipelotrichaceae bacterium 3_1_53]
Length = 193
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L I + I ++L + +P P+ + + ++LG+ ++ ++
Sbjct: 4 LAAILIVFLIAANLILY---HYFPKPK-KPKAGRVYDAAIVLGSPAKEDGSLSRLQKT-- 57
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R+ +RLY+ IIISGG + + AE+ + + G+ ++ + L
Sbjct: 58 -----RMDAAIRLYRQHTVQ----RIIISGGSVR-NDYAEAEIMAAYAITCGIAKEVLLL 107
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
E ++ +T++N +++ + + ++++V+S++H++R+ + F
Sbjct: 108 ERKARNTYENLKYAKEICIAHEWHSVVVVTSSFHVRRASYMVRKF 152
>gi|228991869|ref|ZP_04151805.1| hypothetical protein bpmyx0001_26140 [Bacillus pseudomycoides DSM
12442]
gi|228997985|ref|ZP_04157586.1| hypothetical protein bmyco0003_25540 [Bacillus mycoides Rock3-17]
gi|229005536|ref|ZP_04163248.1| hypothetical protein bmyco0002_24730 [Bacillus mycoides Rock1-4]
gi|228755723|gb|EEM05056.1| hypothetical protein bmyco0002_24730 [Bacillus mycoides Rock1-4]
gi|228761718|gb|EEM10663.1| hypothetical protein bmyco0003_25540 [Bacillus mycoides Rock3-17]
gi|228767598|gb|EEM16225.1| hypothetical protein bpmyx0001_26140 [Bacillus pseudomycoides DSM
12442]
Length = 218
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 73/188 (38%), Gaps = 19/188 (10%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +K + F+L+ S I + + ++ + D + ++LG +
Sbjct: 14 KKSKKRRVLQVFLLMVSSI-ILFVSYAAYDIWSYRFKTDEV------DTDAAIVLGAASW 66
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
P R RI + LYK+ II +GG + E+
Sbjct: 67 NGKPSPVFR--------ERINHAISLYKNGSIK----KIIFTGGTKFEAEQEEARTAKAY 114
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ V+ +DI +ETQS T N + + + + +VS H+KR+ +H GI
Sbjct: 115 ALKHNVKDEDILIETQSRFTEDNLKNAKQVGIDNGLHTYTIVSDPLHMKRAMRIAKHIGI 174
Query: 198 NTKASCSD 205
+ AS +
Sbjct: 175 DAYASPTP 182
>gi|126699451|ref|YP_001088348.1| hypothetical protein CD1842 [Clostridium difficile 630]
gi|255101014|ref|ZP_05329991.1| hypothetical protein CdifQCD-6_09404 [Clostridium difficile
QCD-63q42]
gi|255306869|ref|ZP_05351040.1| hypothetical protein CdifA_09792 [Clostridium difficile ATCC 43255]
gi|115250888|emb|CAJ68713.1| conserved hypothetical protein, DUF218 family [Clostridium
difficile]
Length = 248
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFM--LLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
S IFL+V ++ Q +K +L I +I ++ + L Y + L
Sbjct: 29 FSEIFLVVGIVLIIYQIFKKKIKEKKVFYRVLKIIISIFLIVFVVTESLIIFYPKNSLES 88
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +++LG + PS R+ ++ K + +C +++SG
Sbjct: 89 KS----DYLLILGA--------SVKKTTPSTTLKGRLDTALKYLK----INDNCYVVVSG 132
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-----N 175
G + E+ + L+++G++++ I E +S +T++N ++S I+ +
Sbjct: 133 GKGSGEKITEAKAMKDYLIKNGIDKNRIIEEDKSTNTYENFKYSKLKIEEHSQRKLSDLK 192
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
+ +V++ +H+ RS++ G + + + S +P
Sbjct: 193 VKIVTTDFHVLRSKILAYRNGYKNTSFYAS--KSKLSFVPTYY 233
>gi|169349938|ref|ZP_02866876.1| hypothetical protein CLOSPI_00678 [Clostridium spiroforme DSM 1552]
gi|169293506|gb|EDS75639.1| hypothetical protein CLOSPI_00678 [Clostridium spiroforme DSM 1552]
Length = 261
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 67/173 (38%), Gaps = 25/173 (14%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K + +++LG PS R+ T+ Y+ + TII+SGG
Sbjct: 106 KQTDFVIVLGA--------KLNGAVPSTSLKYRLDATLEYYQQFPET----TIIVSGGQG 153
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IILVSS 181
++E+ L++ G+ + I E +S +N +S ++ +++ + + ++++
Sbjct: 154 NGENISEAKAMKQYLIDKGINNNSIIEENKSTYAKENIIYSKKIMDSLKKEKYTVTIITN 213
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+H RS+L + + + ++E+ G L
Sbjct: 214 NFHCYRSKLLANKSNLTAYTYSAKQQKVL-----------IPHYYIREFFGCL 255
>gi|306822552|ref|ZP_07455930.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
gi|309801394|ref|ZP_07695521.1| putative lipoprotein [Bifidobacterium dentium JCVIHMP022]
gi|304554097|gb|EFM42006.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
gi|308221909|gb|EFO78194.1| putative lipoprotein [Bifidobacterium dentium JCVIHMP022]
Length = 249
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 76/201 (37%), Gaps = 25/201 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQS---IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL 57
++ + +F + L R I + ++ + + +G + ++
Sbjct: 41 VVFAVLFEALGGGFLFHWWDAMPRLIRGILVALICIAVVAFGTVEGCIVS---------K 91
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+S Q K + +++LG R PS R+ + + C I
Sbjct: 92 MSAQGKPGLDYVIVLGA--------QVHRARPSRVLKFRLDKAIEYLND--NPKTIC--I 139
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGG E+ + L +G+ I E++S T +N S +I + ++
Sbjct: 140 VSGGQGSNEPFPEAQGMADYLKTNGIAESRIVEESKSKTTEENIINSKKLIADEN-ASVG 198
Query: 178 LVSSAYHLKRSQLYFQHFGIN 198
++++ +H+ R+ + G++
Sbjct: 199 IITNDFHVFRALQIARKNGLD 219
>gi|93007196|ref|YP_581633.1| hypothetical protein Pcryo_2372 [Psychrobacter cryohalolentis K5]
gi|92394874|gb|ABE76149.1| protein of unknown function DUF218 [Psychrobacter cryohalolentis
K5]
Length = 259
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 44/250 (17%), Positives = 86/250 (34%), Gaps = 40/250 (16%)
Query: 2 LLSWIFLIVSYWH-----LLCQ--SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
L+ +F+ + +CQ + ++++ + I +GI L + ++
Sbjct: 37 LVGMVFVAHGIFWRNIIRFICQNNWLSRLWYGLWMVFFIWLISFGIFVYALQQQIKQ--- 93
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
S + I++LG+GT P + R+ L S K
Sbjct: 94 ----SAKPIPRVAAIIVLGSGTVAGKPTPTL--------AKRLDTAAPLINSQK----GA 137
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+I SGG +E+ + L + + I E QS T +N +S ++
Sbjct: 138 LVITSGGIGFGQTHSEAYIMATYLYDTYDIPLKHILQEGQSTSTAENLIYSQEILAAKGI 197
Query: 174 K---NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
I +V+S +H+ R+ +H G Y+ P + +EY
Sbjct: 198 SIKAPIAIVTSDFHIIRAANIARHQG---------YVQPTMLASPTPLSIRY-NAWFREY 247
Query: 231 IGILIAYYRG 240
+ + G
Sbjct: 248 FAFVSGWLFG 257
>gi|226941137|ref|YP_002796211.1| transmembrane protein [Laribacter hongkongensis HLHK9]
gi|226716064|gb|ACO75202.1| Probable transmembrane protein [Laribacter hongkongensis HLHK9]
Length = 253
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 9/148 (6%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ IV+LG G S + R+ RL + ++++G
Sbjct: 76 PPDARFDAIVVLGGGKRPQAVEFGG-DTVSADTLLRLRYAARLARQS-----GKPVLVTG 129
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P G E+++ L E V +E+ SL T NA+ S+ +++ + I LVS
Sbjct: 130 GAPLG-GPPEAVLMAAALAEWQVSAR--WVESASLTTADNARLSAGLLRQAGVQRIALVS 186
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN 208
A+HL R+ F+ G+ + + +
Sbjct: 187 QAWHLPRAIRAFERQGLTVLPAPTAFTR 214
>gi|225076794|ref|ZP_03719993.1| hypothetical protein NEIFLAOT_01845 [Neisseria flavescens
NRL30031/H210]
gi|224951892|gb|EEG33101.1| hypothetical protein NEIFLAOT_01845 [Neisseria flavescens
NRL30031/H210]
Length = 218
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 16/186 (8%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
LL +++ + L + GI T + Y+ L + + V+
Sbjct: 1 MISLLKSRNGLRYYLFRGLALSVLLVCGIFLTGTWQI----YRTGLQTLPKDAHADAAVV 56
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG A PS RI + LY+S + II +GG P+K + E+
Sbjct: 57 LGA--------AAWDKRPSPVFRERINHAITLYQSHRVG----KIIFTGGTPKKGFMTEA 104
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
V L+ G+ +I E S +T++N ++ +II+VS YHL R++
Sbjct: 105 EVGRRYALKQGIPAHNILFENTSRNTYENMLNIVPIMHANGVGSIIVVSDPYHLARAEEM 164
Query: 192 FQHFGI 197
G+
Sbjct: 165 AADLGL 170
>gi|124268119|ref|YP_001022123.1| hypothetical protein Mpe_A2935 [Methylibium petroleiphilum PM1]
gi|124260894|gb|ABM95888.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 266
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 69/186 (37%), Gaps = 18/186 (9%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
I+++G G + S R+ +RL + + SGG
Sbjct: 88 PAPTTAILVIGGGRIPRAPESGT-ADLQPASLERLRYAVRLSRQ-----TGLPLAFSGGL 141
Query: 123 PQKH----GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GL+E+ + + +ET S DT +NA+ S + ++I+L
Sbjct: 142 GWGQHDDGGLSEAEIAQRIAERDFLRPIK-WVETASRDTRENARLSVKQLHTAGVRHIVL 200
Query: 179 VSSAYHLKRSQLYFQH-FG--INTKASCSDYLNA----YYSIIPLSANFYLTELALKEYI 231
V+ A+H+ R+ F+ G + A+ Y +P SA F + L+E +
Sbjct: 201 VTHAWHMPRALRAFRQEAGESMQITAAPMGYFVPADRGVLEWLPSSAGFGEVRVVLRELL 260
Query: 232 GILIAY 237
+ Y
Sbjct: 261 ARGVGY 266
>gi|255068057|ref|ZP_05319912.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
gi|255047655|gb|EET43119.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
Length = 214
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 70/194 (36%), Gaps = 16/194 (8%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
L +++ + L + GI + Y + ++
Sbjct: 1 MISLFRSRNGLRYYLFRGIGLSILLVLGIFGEGAWQ----VYHTGSQPLPGHVRADAALV 56
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG A PS RI + LY+S + I+ +GG P+K + E+
Sbjct: 57 LGA--------AAWDKRPSPIFRERINHAITLYQSHRVE----KIVFTGGTPKKGYMTEA 104
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
V L+ G+ +I E S +T++N + +++ +II+VS YHL R+
Sbjct: 105 EVGRRYALKQGIPAHNILFENTSRNTYENIRNIRPILRAEGIGSIIIVSDPYHLARALEI 164
Query: 192 FQHFGINTKASCSD 205
I S +
Sbjct: 165 ASDLDIEAYISATP 178
>gi|302522754|ref|ZP_07275096.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|302431649|gb|EFL03465.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length = 327
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 83/220 (37%), Gaps = 26/220 (11%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ + + G+ + L + ++ + +V+LG G +
Sbjct: 114 LVLAGTITAIAGYFGFLFACMLAYAFL-------YGHVRVRRRTDYVVVLGAGL-----L 161
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
R+ P + R+ + ++ + +++SGG L E+ + E G
Sbjct: 162 GGERVSPLLAA--RLDRALSAHRKLTKRGREPLLLLSGGKGGDEALPEAEAMARYVREKG 219
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+ E S T +N + S +++ K G ++V+S YH+ R+ + + G+
Sbjct: 220 FPERLLVREEHSATTGENLRNSHALMAKARPGYRCVVVTSNYHVFRTAVTARRVGVRGHV 279
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ +A ++ ++E++ +L+ Y R N
Sbjct: 280 VGAP-----------TAPYFWPSATIREFVALLVDYRRTN 308
>gi|291459679|ref|ZP_06599069.1| putative membrane protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291417711|gb|EFE91430.1| putative membrane protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 260
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 49/245 (20%), Positives = 98/245 (40%), Gaps = 37/245 (15%)
Query: 3 LSWIFLIVSYWHL---LCQSIRKIFFM---SCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
L W FL VS+ L + I + F + +C + +F+ + + ++ L+
Sbjct: 46 LFWFFLSVSFLFLEELIRHGIWRRFPLLRGTCLLGIFTGLLFLLVSWCLIGT-------- 97
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ ++ + +V+LG + P+ PA + R+ + +
Sbjct: 98 EFFSRGEEKLDYLVVLGA--QVRPSGPAAVLRL------RLDRAF----AYLSENPETLC 145
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I+SGG Q +E+ + LL G+ + I LE QS +T +N S+ ++ + +
Sbjct: 146 IVSGGKGQNEPCSEAEAMRDYLLRRGISAERILLEDQSKNTRENIANSARLLNPER-DRV 204
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++SS +H+ R + + G + S S YL L+E + ++
Sbjct: 205 GILSSDFHVYRGKAIAKKAGYREVFAVS----------ARSNRLYLLNNMLRESLALVKD 254
Query: 237 YYRGN 241
GN
Sbjct: 255 KIAGN 259
>gi|257454427|ref|ZP_05619689.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
gi|257448193|gb|EEV23174.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
Length = 274
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 85/226 (37%), Gaps = 39/226 (17%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + ++ ++ F+ L SF I + +L+ + K I++LG GT
Sbjct: 79 KKLWQLVWLLFFVWLISFC-------IFVSYLKQHFNTDNHP----KAAQAIIVLGGGTK 127
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
A+++ R+ + + + + +I SGG ++E+ +
Sbjct: 128 DNKPTDAVKL--------RLDKASEVIRRF----ANALVITSGGFDAGEDVSEAKAMADY 175
Query: 138 LLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSSAYHLKRSQLYFQ 193
L + G+ +I LE QS T N S ++ + II V+S +H R+ L +
Sbjct: 176 LHDTYGISLANISLEEQSTSTELNFVHSKKILAQQGIALNQPIIAVTSDFHTLRASLIGK 235
Query: 194 HFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G N + SD + + + +EY + +
Sbjct: 236 RQGYTNLQVVGSD-----------TPWYIRPNVWFREYFAFISGWL 270
>gi|319638788|ref|ZP_07993547.1| periplasmic protein [Neisseria mucosa C102]
gi|317400029|gb|EFV80691.1| periplasmic protein [Neisseria mucosa C102]
Length = 218
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 42/186 (22%), Positives = 74/186 (39%), Gaps = 16/186 (8%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
LL +++ + L + GI + + Y+ L + + V+
Sbjct: 1 MISLLKSRNGLRYYLFRGLALSVLLVCGIFLSGTWQI----YRTGLQTLPKDVHADAAVV 56
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG A PS RI + LY+S + II +GG P+K + E+
Sbjct: 57 LGA--------AAWDKRPSPVFRERINHAITLYQSHRVG----KIIFTGGTPKKGFMTEA 104
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
V L+ G+ +I E S +T++N + ++ +II+VS YHL R++
Sbjct: 105 EVGRRYALKQGIPAHNILFENTSRNTYENLRNIVPIMHANGVGSIIVVSDPYHLARAEEM 164
Query: 192 FQHFGI 197
G+
Sbjct: 165 AADLGL 170
>gi|253577135|ref|ZP_04854456.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843517|gb|EES71544.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 228
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 76/181 (41%), Gaps = 16/181 (8%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+RK F +++ IGW + +L + + P + + ++LG
Sbjct: 22 RVRKRIFRWGLVVISLGIGWML---YVLAQIGSIERNPAANSDLSDPAEVGIVLGAALWG 78
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG-DPQKHGLAESIVYNNK 137
P +R R+ ++++ YK+ K +++GG D E+ N
Sbjct: 79 DEPSPGLR--------ERLDQSLKDYKAGKFQW----FLLTGGLDTATSQYTEAEGMANY 126
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L + GV R+ + LE ++ T++N +FS ++K ++++V+ +H R+ Q
Sbjct: 127 LEQHGVPREKMLLENKATSTYENLKFSQEILKERGFTSVLIVTHTFHGNRAYEIAQALNY 186
Query: 198 N 198
Sbjct: 187 E 187
>gi|333023541|ref|ZP_08451605.1| hypothetical protein STTU_1045 [Streptomyces sp. Tu6071]
gi|332743393|gb|EGJ73834.1| hypothetical protein STTU_1045 [Streptomyces sp. Tu6071]
Length = 334
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 83/220 (37%), Gaps = 26/220 (11%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ + + G+ + L + ++ + +V+LG G +
Sbjct: 121 LVLAGTITAIAGYFGFLFACMLAYAFL-------YGHVRVRRRTDYVVVLGAGL-----L 168
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
R+ P + R+ + ++ + +++SGG L E+ + E G
Sbjct: 169 GGERVSPLLAA--RLDRGLSAHRKLTKRGREPLLLLSGGKGGDEALPEAEAMARYVREKG 226
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+ E S T +N + S +++ K G ++V+S YH+ R+ + + G+
Sbjct: 227 FPERLLVREEHSATTGENLRNSHALMAKARPGYRCVVVTSNYHVFRTAVTARRVGVRGHV 286
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ +A ++ ++E++ +L+ Y R N
Sbjct: 287 VGAP-----------TAPYFWPSATIREFVALLVDYRRTN 315
>gi|261401556|ref|ZP_05987681.1| putative periplasmic protein [Neisseria lactamica ATCC 23970]
gi|269208394|gb|EEZ74849.1| putative periplasmic protein [Neisseria lactamica ATCC 23970]
Length = 218
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 79/213 (37%), Gaps = 18/213 (8%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKRP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + II +GG +K + E+ V L+ G+ +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN- 208
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSATPTTRF 183
Query: 209 ---AYYSIIPLSANFYLTELALKEYIGILIAYY 238
I L + L+ L+++ G +
Sbjct: 184 DAGNKKKIFMLQEGYALSLYRLEKWGGRFWGWL 216
>gi|261379601|ref|ZP_05984174.1| putative periplasmic protein [Neisseria subflava NJ9703]
gi|284798080|gb|EFC53427.1| putative periplasmic protein [Neisseria subflava NJ9703]
Length = 218
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 16/186 (8%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
LL +++ + L + GI + + Y+ + + V+
Sbjct: 1 MISLLKSRNGLRYYLFRGLALSVLLVCGIFLSGTWQI----YRTGSHTLPKDAHADAAVV 56
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG A PS RI + LY+S + II +GG P+K + E+
Sbjct: 57 LGA--------AAWDKRPSPVFRERINHAITLYQSHRVG----KIIFTGGTPKKGFMTEA 104
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
V L+ G+ +I E S +T++N + ++ +II+VS YHL R++
Sbjct: 105 EVGRRYALKQGIPAHNILFENTSRNTYENLRNIVPIMHANGVGSIIVVSDPYHLARAEEM 164
Query: 192 FQHFGI 197
G+
Sbjct: 165 AADLGL 170
>gi|325524355|gb|EGD02447.1| hypothetical protein B1M_21438 [Burkholderia sp. TJI49]
Length = 97
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
LE S T++NA+F++S++++ ILV+S+Y ++R+ L F FGI+ + ++ +
Sbjct: 1 ILEPDSRTTYENAKFTASILRSRHDDARILVTSSYQMRRALLDFHRFGIDPQPVYANRRD 60
Query: 209 AYYSIIPLSANFYLTELALKEYIGIL---IAYYRG 240
A +P N E AL E +GI + G
Sbjct: 61 AQTGWLPRWRNIVNAEQALHELVGIAQFHVYRLLG 95
>gi|318058341|ref|ZP_07977064.1| hypothetical protein SSA3_10385 [Streptomyces sp. SA3_actG]
gi|318079249|ref|ZP_07986581.1| hypothetical protein SSA3_21722 [Streptomyces sp. SA3_actF]
Length = 335
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 83/220 (37%), Gaps = 26/220 (11%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ + + G+ + L + ++ + +V+LG G +
Sbjct: 122 LVLAGTITAIAGYFGFLFACVLAYAFL-------YGHVRVRRRTDYVVVLGAGL-----L 169
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
R+ P + R+ + ++ + +++SGG L E+ + E G
Sbjct: 170 GGERVSPLLAA--RLDRGLSAHRKLTKRGREPLLLLSGGKGGDEALPEAEAMARYVREKG 227
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+ E S T +N + S +++ K G ++V+S YH+ R+ + + G+
Sbjct: 228 FPERLLVREEHSATTGENLRNSHALMAKARPGYRCVVVTSNYHVFRTAVTARRVGVRGHV 287
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ +A ++ ++E++ +L+ Y R N
Sbjct: 288 VGAP-----------TAPYFWPSATIREFVALLVDYRRTN 316
>gi|118474006|ref|YP_889974.1| hypothetical protein MSMEG_5741 [Mycobacterium smegmatis str. MC2
155]
gi|118175293|gb|ABK76189.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
155]
Length = 211
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T+ I Y R + + ++ Q +I++GG+PQ+ G
Sbjct: 62 AIVILGYGLKPDGTMRQI-------LYHRTLTGLVIAQAFPQS----PVIVTGGNPQR-G 109
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ N LL G + I +E ++ T QNAQFS + K IILV+S+ H R
Sbjct: 110 VTEAAAMRNLLLMLGFPANRIIVEDRANSTVQNAQFSVPLAKKAGTTGIILVTSSSHQGR 169
Query: 188 SQLYFQHFGINTKASCS 204
+ F G N A+ S
Sbjct: 170 ADQNFADAGGNILATVS 186
>gi|261365693|ref|ZP_05978576.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
gi|288565787|gb|EFC87347.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
Length = 224
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 68/192 (35%), Gaps = 18/192 (9%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+R F + + +G + Y + ++LG
Sbjct: 5 FRSRNGLRYYLFRGIGLSILLILGIFSVGAW------QVYHTGSQPLPRHVRADAALVLG 58
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
A PS RI + LY+S + I+ +GG +K + E+ V
Sbjct: 59 A--------AAWDKRPSPVFRERINHAITLYQSHRVE----KIVFTGGTSKKGYMTEAEV 106
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+ G+ +I E S +T++N + +++ ++II+VS YHL R+
Sbjct: 107 GRRYALKQGIPAHNIIFENTSRNTYENIRNIRPILRAEGIESIIIVSDPYHLARALEIAS 166
Query: 194 HFGINTKASCSD 205
I S +
Sbjct: 167 DLDIEAYVSATP 178
>gi|113866057|ref|YP_724546.1| hypothetical protein H16_A0026 [Ralstonia eutropha H16]
gi|113524833|emb|CAJ91178.1| hypothetical integral membrane protein [Ralstonia eutropha H16]
Length = 253
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 88/241 (36%), Gaps = 34/241 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+LL+W + V++W ++++ + +F W I ++ S + +
Sbjct: 38 LLLAWQWPRVAHWRAASHRRQQLWQAA----WIAFALWLATVAIFFYNIHRSTEAAIPGS 93
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K IV+LG+GT P+ + + + Q + +SG
Sbjct: 94 SPVK---AIVILGSGT------------PNCVASPTLVARLDQGLKQAQRWPQAKVAVSG 138
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
G E+ + L++ GV D + E +S T +N FS +++ I+
Sbjct: 139 GQDFGLRCREADIMAEYLIDRGVAADRVVREGRSTSTEENLLFSRRLLEEQGIAATDPIV 198
Query: 178 LVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+V+S +H++R+ + G + + + L+EY +
Sbjct: 199 VVTSDFHVRRAVRIARKAGFGEVAGVGAG-----------TPLYLRYNAWLREYFAAISG 247
Query: 237 Y 237
+
Sbjct: 248 W 248
>gi|77360123|ref|YP_339698.1| enzyme [Pseudoalteromonas haloplanktis TAC125]
gi|76875034|emb|CAI86255.1| conserved protein of unknown function ; putative enzyme
[Pseudoalteromonas haloplanktis TAC125]
Length = 242
Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 37/244 (15%), Positives = 93/244 (38%), Gaps = 17/244 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ L +F ++ +F + + ++ +++K+ + +
Sbjct: 3 LPLLGLFALIMLLLAFRGKRSALFLSFISLAALLLVSTPLVANLIIKNNES--PALAFNS 60
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV+LG + A + + +R+ E ++L K + +I+SG
Sbjct: 61 LKQPKIDKIVVLGCDINPNTALSAN-NQLGNCALTRLVEGIKLAKLY----PNAQLIVSG 115
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + S + N + G+ ++ + ++DT A+ + + + + LV+
Sbjct: 116 G--GYQKVTNSSLMYNTAINLGINKNRLVQNPAAMDTPAEARLLAPTLVDY---KVALVT 170
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN----AYYSII-PLSANFYLTELALKEYIGILI 235
S H+ R++ F G+ + +DY N ++ + P + ++ E +G
Sbjct: 171 SVLHMPRAKDLFNAQGVEVITAATDYHNFAVLPWHKQLVPNAQALHVVTQYSHEVVGKAW 230
Query: 236 AYYR 239
R
Sbjct: 231 ISMR 234
>gi|257125972|ref|YP_003164086.1| hypothetical protein Lebu_1204 [Leptotrichia buccalis C-1013-b]
gi|257049911|gb|ACV39095.1| protein of unknown function DUF218 [Leptotrichia buccalis C-1013-b]
Length = 221
Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 79/193 (40%), Gaps = 31/193 (16%)
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
Y S K + +++LG + + E ++ + +
Sbjct: 30 EYINDRKSVNENKKVDYVIILGARVKGEKPTKS------------LMERIKAATEYLKKN 77
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
+I +GG + +AE + +LL++G+ D I LE +S +T +N +FS IKN+
Sbjct: 78 PEVKVIATGGQGKNENVAEGLAIKRELLKNGISEDRIVLEDKSKNTVENFRFSLEKIKNI 137
Query: 172 QGK-------------NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
+ +++V++ YH+ RS+ + G + + L A +I +
Sbjct: 138 ENSKNILNNNKKNQKIKVLIVTNDYHVFRSKNIARKVGFDNENYEIYGLPAKTPLISIPK 197
Query: 219 NFYLTELALKEYI 231
+++ +E++
Sbjct: 198 SYF------REFL 204
>gi|262372717|ref|ZP_06065996.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262312742|gb|EEY93827.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 378
Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 18/175 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T+ I + + R+ +T+ + + I++SG
Sbjct: 214 AIVVLGGGLTL--GANGKDIVVNNYTRLRLEKTLEI-----EKKYDLPIVLSG------- 259
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVSSAYHLK 186
E+ L E G+E LE +S++T +N++FSS +++ G ++L++ YH+
Sbjct: 260 -VEAPYMQAWLNERGIEAK--LLEKRSMNTCENSRFSSLLLQKKGGAPTVLLITDEYHMP 316
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
R++ F GI T + + P N+ + A E + + G+
Sbjct: 317 RTRRLFALNGIETVPVIAPMPTQLTNWRPSEQNYDHSRRANYEMLATIRDMLFGS 371
>gi|222529669|ref|YP_002573551.1| hypothetical protein Athe_1684 [Caldicellulosiruptor bescii DSM
6725]
gi|222456516|gb|ACM60778.1| protein of unknown function DUF218 [Caldicellulosiruptor bescii DSM
6725]
Length = 195
Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 12/136 (8%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K + I++LG PS R+ LYK+ II+ G
Sbjct: 35 PKKSDCIIVLGCAVYGD--------FPSPFFRERLNRAFELYKNGYARY----IIVCGAK 82
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ L+E GV + + E +S T++N +S ++ K+ I+VS+
Sbjct: 83 GPGENISEAEAGKRYLVEMGVLPEFVLKEDKSFSTYENLLYSKRIMNKKGFKSAIIVSNM 142
Query: 183 YHLKRSQLYFQHFGIN 198
+HL+R+ L + IN
Sbjct: 143 FHLERAHLIAKKLKIN 158
>gi|237727319|ref|ZP_04557800.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229434175|gb|EEO44252.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 230
Score = 104 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 21/226 (9%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
IFL++ +L K ++ LLF G + + + Y RPL +K
Sbjct: 15 IFLLLGV--VLKSKRWKRLCLTLSALLFLLFSNGALYQWIAEQWYKEYDRPL---PERKQ 69
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQS-YSRIFETMRLYKSCKQHSMHC----TIIISG 120
++LG R P F R+ E +RLYK + + +II S
Sbjct: 70 YTYGIVLGG----YSYWDWKRSRPEFSEIADRLLEGIRLYKHGRIRKLVLASDGSIIESK 125
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN-MQGKNIILV 179
G + L + G+ +D+ LET++ +T++NA F+ +I N M+ ++ +L+
Sbjct: 126 DGKGLQGN--AADMKQYLADLGMPLEDVILETRANNTWENATFTLELIGNSMKTESTLLI 183
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYL----NAYYSIIPLSANFY 221
+SA H++RS F G+N +D + +P
Sbjct: 184 TSATHMRRSLWTFHAAGLNPDTYITDTFPEIKGEKTNFLPSWHVLA 229
>gi|225403125|ref|ZP_03760422.1| hypothetical protein CLOSTASPAR_04453 [Clostridium asparagiforme
DSM 15981]
gi|225043243|gb|EEG53489.1| hypothetical protein CLOSTASPAR_04453 [Clostridium asparagiforme
DSM 15981]
Length = 247
Score = 104 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 74/185 (40%), Gaps = 25/185 (13%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
LS + + D + +V+LG A+R+ RI R ++ + I
Sbjct: 86 LSAKGEPDLDYLVVLGAAVKGTEPGEALRL--------RIQAAARYLEA----NPRTVAI 133
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGG + E+ +LL G+ + I E +S T +N +FS ++ Q +
Sbjct: 134 VSGGRGTGEEITEAECMERELLRLGIPPERIVQENRSQSTAENIRFSYELM-PGQTARVG 192
Query: 178 LVSSAYHLKRSQLYFQH-FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++S+ +H+ R+ + + Y + L ++E++ +++
Sbjct: 193 VLSNNFHIFRAVAIARKQANYPVCGIAAPY-----------SGILLPHYMVREFMTLVVD 241
Query: 237 YYRGN 241
RGN
Sbjct: 242 KLRGN 246
>gi|313636439|gb|EFS02193.1| conserved hypothetical protein [Listeria seeligeri FSL S4-171]
Length = 189
Score = 104 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 60/144 (41%), Gaps = 13/144 (9%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG P PS R+ + + ++++SG
Sbjct: 33 KPAENADTVLILGAKVNGNPA------YPSLVLQERLDAAV----VYLNNHPKVSVVVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + E+ V L+ G+ R+ I+ ET+S T +N S+ + ++V+
Sbjct: 83 GKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRTEENISNSNE---KFELGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
S YH+ R+ + + I+ +
Sbjct: 140 SDYHMYRALMLAERQNIDVSGLPA 163
>gi|269213925|ref|ZP_05983151.2| putative periplasmic protein [Neisseria cinerea ATCC 14685]
gi|269145137|gb|EEZ71555.1| putative periplasmic protein [Neisseria cinerea ATCC 14685]
Length = 181
Score = 104 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 67/179 (37%), Gaps = 20/179 (11%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ ++LG A PS RI + LY+ + II +GG +
Sbjct: 14 RADAALVLGA--------AAWDKRPSPVFRERINHAIALYQGHRVG----KIIFTGGRSK 61
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
K + E+ V L+ GV +I E S +T++N +++ ++++VS YH
Sbjct: 62 KGYMTEAEVGRRYALKQGVPAHNILFENTSRNTYENLNNIRPILQANGISSVVIVSDPYH 121
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY-RGNR 242
L R+ + G+ S + + NF L E + + + R
Sbjct: 122 LARAAEMAEDLGVRVYVSATP--TTRFDTASGKKNF-----ILHEGYALTLYRLEKWGR 173
>gi|300854922|ref|YP_003779906.1| hypothetical protein CLJU_c17410 [Clostridium ljungdahlii DSM
13528]
gi|300435037|gb|ADK14804.1| uncharacterized conserved membrane protein [Clostridium ljungdahlii
DSM 13528]
Length = 204
Score = 104 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 45/209 (21%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 28 CFMLLFSFIGWGIIPTIL-------LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
F++L ++ ++ I+ L L F Y+ P + + ++I++LG
Sbjct: 5 VFIILLKYMAISVLFFIIIVLVVINLYPLLF-YKSPETKLK-RDRYDVIIILG------- 55
Query: 81 TIPAIR-IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
PA++ +PS R+ + + L+ ++ II SGG + E+ + N
Sbjct: 56 -FPALQDGKPSPIMRERVIKAVELFNKGYANN----IICSGGGVYNKYI-EADIMANFAE 109
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
G+ + E +S +T+QN Q S ++++ + + ++V+S +HL+RS + F I
Sbjct: 110 SLGIPNSCLIREDKSRNTYQNIQNSIKIMEDKKWSSAMIVTSPWHLRRSNYFLSKFNITY 169
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALK 228
+ SDY + I ++ + + +K
Sbjct: 170 QMEKSDYPREFSYIYIIAMYMWENYVMIK 198
>gi|289435703|ref|YP_003465575.1| hypothetical protein lse_2342 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171947|emb|CBH28493.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 189
Score = 104 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 60/144 (41%), Gaps = 13/144 (9%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG P PS R+ + + ++++SG
Sbjct: 33 KPAENADTVLILGAKVNGNPA------SPSLVLQERLDAAV----VYLNNHPKVSVVVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + E+ V L+ G+ R+ I+ ET+S T +N S+ + ++V+
Sbjct: 83 GKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRTEENISNSNE---KFELGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
S YH+ R+ + + I+ +
Sbjct: 140 SDYHMYRALMLAERQNIDVSGLPA 163
>gi|226311001|ref|YP_002770895.1| hypothetical protein BBR47_14140 [Brevibacillus brevis NBRC 100599]
gi|226093949|dbj|BAH42391.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 213
Score = 104 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ + ++LG P +R R+ + LYK ++++GG
Sbjct: 48 RHATVGIVLGAAVWGEGPSPGLR--------ERLEQAAILYKE----GYVSKLLVTGGLG 95
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ + E+ V N L+ G+ +DI LE++S T++N + +++ ++ +++S Y
Sbjct: 96 EGKTITEAAVSRNYLVAKGIPEEDILLESKSTSTYENLLYGQQVLEEHHIQDALIISHDY 155
Query: 184 HLKRSQLYFQHFGINTKASCS 204
HL R+ + GI +
Sbjct: 156 HLARAMVMADSLGIVASPVGT 176
>gi|229085827|ref|ZP_04218054.1| hypothetical protein bcere0022_24320 [Bacillus cereus Rock3-44]
gi|228697494|gb|EEL50252.1| hypothetical protein bcere0022_24320 [Bacillus cereus Rock3-44]
Length = 209
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 73/188 (38%), Gaps = 19/188 (10%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +K + F+L+ S I + + ++ + D + ++LG +
Sbjct: 5 KKSKKRRILQVFLLMISSI-ILFVSYAAYDIWSYRFKTDEV------DTDAAIVLGAASW 57
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
P R RI + LYK+ II +GG + E+
Sbjct: 58 NGKPSPVFR--------ERINHAISLYKNGSIK----KIIFTGGTKFEAEQEEARTAKAY 105
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ V+ +DI +ETQS T N + + + + + +VS H+KR+ +H G+
Sbjct: 106 ALKHDVKDEDILIETQSRFTEDNLKNAKQVGMDNGLQTYTIVSDPLHMKRAMKIAKHIGM 165
Query: 198 NTKASCSD 205
+S +
Sbjct: 166 EAYSSPTP 173
>gi|167770124|ref|ZP_02442177.1| hypothetical protein ANACOL_01467 [Anaerotruncus colihominis DSM
17241]
gi|167667756|gb|EDS11886.1| hypothetical protein ANACOL_01467 [Anaerotruncus colihominis DSM
17241]
Length = 396
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/219 (16%), Positives = 91/219 (41%), Gaps = 30/219 (13%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
R + F+L + + ++ +++++ F P + +V+LG+
Sbjct: 198 WWRWLRLAVSFVLAAAVLTGAVLSVLMIRYAWF-------MPPRAGESYTVVVLGS---- 246
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
++ +PS R+ + ++++GG + ++E++ + L
Sbjct: 247 ----QSVNGKPSQILRLRLDAAYTYLAAHSDT----PVVVTGGVDRGETISEAVAMRDYL 298
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+ G+ D I +E QS +T +N +F+ +I + +++V+ +H R +Y Q G+
Sbjct: 299 IARGLPADRIYMEDQSRNTLENLRFAGELITHEDLPRQLLIVTDGFHQLRGAIYAQAAGL 358
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
A+ S + ++P ++E + +L A
Sbjct: 359 KPCAAVSS--TTPWGLLPS--------YWVRECMALLRA 387
>gi|285017167|ref|YP_003374878.1| hypothetical protein XALc_0349 [Xanthomonas albilineans GPE PC73]
gi|283472385|emb|CBA14890.1| hypothetical protein XALc_0349 [Xanthomonas albilineans]
Length = 204
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 14/157 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ I++LG A +PS RI + LY+ T+I +G
Sbjct: 42 DQAAPADAIIVLGA--------AAYDAKPSPVFEERIRHALDLYR----RGYAPTLIFTG 89
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G AE+ V L GV D + +ET S T QN + +++ + +I+VS
Sbjct: 90 GFGNGARFAEAQVARRYALRQGVPADAVLIETISRTTRQNLIQARQIMRAHGLRRVIVVS 149
Query: 181 SAYHLKRSQLYFQHFGINTKAS--CSDYLNAYYSIIP 215
H+ R+ + I+ AS S ++ + P
Sbjct: 150 DPLHMARALRLCRELQIDALASSTPSSRFRSFQTRWP 186
>gi|255655858|ref|ZP_05401267.1| hypothetical protein CdifQCD-2_09204 [Clostridium difficile
QCD-23m63]
gi|296450861|ref|ZP_06892611.1| conserved hypothetical protein [Clostridium difficile NAP08]
gi|296879136|ref|ZP_06903131.1| conserved hypothetical protein [Clostridium difficile NAP07]
gi|296260332|gb|EFH07177.1| conserved hypothetical protein [Clostridium difficile NAP08]
gi|296429679|gb|EFH15531.1| conserved hypothetical protein [Clostridium difficile NAP07]
Length = 248
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFM--LLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
S IFL+V ++ Q +K +L I +I ++ + L Y + L
Sbjct: 29 FSEIFLVVGIILIIYQIFKKKIKEKKVFYRVLKIIISVFLIVFVVTESLIIFYPKNSLES 88
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +++LG + PS R+ ++ K + +C +++SG
Sbjct: 89 KS----DYLLILGA--------SVKKTIPSTTLKGRLNTALKYLK----VNDNCYVVVSG 132
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-----N 175
G + E+ + L+++G++++ I E +S +T++N ++S I+ +
Sbjct: 133 GKGSGENITEAKAMKDYLIKNGIDKNRIIEEDKSTNTYENFKYSKFKIEERSERKLSDLK 192
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
+ +V++ +H+ RS++ G + + + S +P
Sbjct: 193 VKIVTTDFHVLRSKILAYRNGYKNTSFYAS--KSKLSFVPTYY 233
>gi|313632066|gb|EFR99164.1| conserved hypothetical protein [Listeria seeligeri FSL N1-067]
Length = 189
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 60/144 (41%), Gaps = 13/144 (9%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ + +++LG P PS R+ + + ++++SG
Sbjct: 33 KPAENADTVLILGAKVNGNPA------SPSLVLQERLDAAV----VYLNNHPKVSVVVSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + E+ V L+ G+ R+ I+ ET+S T +N S+ + ++V+
Sbjct: 83 GKGADESVTEASVMEEYLVNEGIARNRIEKETKSKRTEENISNSNE---KFELGKTVIVT 139
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
S YH+ R+ + + I+ +
Sbjct: 140 SDYHMYRALMLAERQNIDVSGLPA 163
>gi|167465736|ref|ZP_02330825.1| hypothetical protein Plarl_24758 [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381937|ref|ZP_08055887.1| hypothetical protein PL1_0708 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321154077|gb|EFX46405.1| hypothetical protein PL1_0708 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 233
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 75/211 (35%), Gaps = 36/211 (17%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+L + + W LL P + + ++LG P +
Sbjct: 4 AVFLGILLAGLLWTFYVQWLLSR--------QDYPALPEGVDTGIVLGAKLETNQASPGL 55
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG--DPQKHGLAESIVYNNKLLESGV 143
R+ + + LY K +I+SGG + E+ N L++ G+
Sbjct: 56 --------AERLDQAISLYNQRKFKH----LIVSGGLDKEGDSQITEAEGMRNYLVQKGI 103
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
I +E Q+ +T++N FS +++ + I+++ YH R+
Sbjct: 104 PEQAITMEKQAKNTYENLVFSKRIMEQKGWTSCIIITHEYHGARAMDIA----------- 152
Query: 204 SDYLNAYYSIIPLSA--NFYLTELALKEYIG 232
D++ + + + + ++ ++E +
Sbjct: 153 -DFIALSPAYLSTTDSTHLFMPYHKIREILA 182
>gi|169794855|ref|YP_001712648.1| hypothetical protein ABAYE0681 [Acinetobacter baumannii AYE]
gi|215482402|ref|YP_002324584.1| hypothetical protein ABBFA_000666 [Acinetobacter baumannii
AB307-0294]
gi|301344954|ref|ZP_07225695.1| hypothetical protein AbauAB0_01897 [Acinetobacter baumannii AB056]
gi|301512264|ref|ZP_07237501.1| hypothetical protein AbauAB05_11802 [Acinetobacter baumannii AB058]
gi|301594344|ref|ZP_07239352.1| hypothetical protein AbauAB059_00995 [Acinetobacter baumannii
AB059]
gi|332853463|ref|ZP_08434782.1| hypothetical protein HMPREF0021_02365 [Acinetobacter baumannii
6013150]
gi|332870554|ref|ZP_08439296.1| hypothetical protein HMPREF0020_02948 [Acinetobacter baumannii
6013113]
gi|169147782|emb|CAM85645.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter baumannii AYE]
gi|213988119|gb|ACJ58418.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|332728669|gb|EGJ60037.1| hypothetical protein HMPREF0021_02365 [Acinetobacter baumannii
6013150]
gi|332732114|gb|EGJ63383.1| hypothetical protein HMPREF0020_02948 [Acinetobacter baumannii
6013113]
Length = 261
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 24/240 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ---RPL 57
++ + + L + + FF + GW L+ L + +
Sbjct: 36 LVPLVLGAFFCLYALFYYHLERFFFYHYRLHTLWRFGWLCFWIWLI-GLGYFFNFIKENK 94
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ Q I++LG+G +PS R+ +I
Sbjct: 95 DASQNLPAVKAIIVLGSGVEN--------GQPSAILAKRLDTAA----PVALSQPQAKVI 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--- 173
++GG +E++V + L + + +D + LE +S T N + S +++
Sbjct: 143 LTGGLDFSEKESEALVMSRYLEQHFHIAKDRMILEDKSTSTELNLKNSKPLLEQAHINAN 202
Query: 174 KNIILVSSAYHLKRSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ I +V+S +H R+ + G + A+ + + Y + + Y + L EY
Sbjct: 203 QPIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAETPLITRYNAWL-REYFAYASGWLLNEY 261
>gi|229817491|ref|ZP_04447773.1| hypothetical protein BIFANG_02754 [Bifidobacterium angulatum DSM
20098]
gi|229785280|gb|EEP21394.1| hypothetical protein BIFANG_02754 [Bifidobacterium angulatum DSM
20098]
Length = 253
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 83/234 (35%), Gaps = 37/234 (15%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+ + + +W L + +R+ + +L I +G + ++ + +
Sbjct: 52 AGLAVWFGWWKALPKVVRR---VCAVVLCTGLICFGAVEGWVISG---------MRAAGE 99
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ +++LG + PS R+ + + + + + I+SGG
Sbjct: 100 PGLDYVIVLGA--------QVHKTRPSLVLQYRLDKAI----DYLESNPNTICIVSGGKG 147
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E+ L G+ I E++S DT QN S ++ +I +++S +
Sbjct: 148 ANEPFPEAQGMAEYLERHGIAASRIIRESKSKDTRQNIANSRRLMTKRN-ASIGIITSDF 206
Query: 184 HLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
H+ R+ + G+ N + S S L L+E+ L
Sbjct: 207 HVARAMQIARDQGLANAQGIASG-----------SPGDMLVNNMLREFFAELKY 249
>gi|210608912|ref|ZP_03288049.1| hypothetical protein CLONEX_00228 [Clostridium nexile DSM 1787]
gi|210152829|gb|EEA83835.1| hypothetical protein CLONEX_00228 [Clostridium nexile DSM 1787]
Length = 248
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 87/245 (35%), Gaps = 42/245 (17%)
Query: 3 LSWIFLIVSYWHL--------LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
+W + + ++ + + I +L F ++ + +
Sbjct: 30 FTWFWAVFGLANIGIGILTRGIPVWLEYILTGIFIVLWMIFFCVEVLILCAMISVA---- 85
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
K+ I++LG I R+ + + R+ +R +
Sbjct: 86 --------PKNMKYIIILGA------QIRGKRVTEALKR--RLDRGIR----YLNENPET 125
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+I+SGG + + E+ L G++ + I LE +S T++N + S + I + +
Sbjct: 126 IVIVSGGRGKGEDITEAEAMAEYLENCGIDANRICLEEKSTSTYENLKKSLAFIDDERRD 185
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I +V++ +H+ R+ + G Y+I S ++E+ +L
Sbjct: 186 KIGIVTNNFHIYRAVKLAKSIGY----------RKVYAITASSNLAVFPNYMVREFFAVL 235
Query: 235 IAYYR 239
+ R
Sbjct: 236 ALFLR 240
>gi|225027612|ref|ZP_03716804.1| hypothetical protein EUBHAL_01869 [Eubacterium hallii DSM 3353]
gi|224955068|gb|EEG36277.1| hypothetical protein EUBHAL_01869 [Eubacterium hallii DSM 3353]
Length = 250
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/241 (17%), Positives = 92/241 (38%), Gaps = 32/241 (13%)
Query: 1 MLLSWIFLIVSYWHLLCQS----IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
+++S I LI ++ Q ++K F C + + + ++ T ++ +
Sbjct: 35 LVVSGILLIGGIFYKNFQQGIFYLQKYFLGKCVIGIMAIAIGIVVITAVI---ETVLIVK 91
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ + +++ +IVL G + S R+ + + + +
Sbjct: 92 ASAKKPQENATLIVL---GCKVYGE------HASRSLRERLDAAL----IYLEENPNSQC 138
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKN 175
I+SGG + ++E+ L + G+ I E +S T +N +FS +++ G N
Sbjct: 139 IVSGGMGEGEKISEAECMYRYLTKKGINSSRIIKEDKSTSTRENLRFSKKIMEEKGLGNN 198
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I + +S YH R+ + G + A +A + ++E GIL
Sbjct: 199 IAIATSEYHQYRASQIAKSLGFSVGAVSGH-----------TAWWLFPTFYMRELYGILY 247
Query: 236 A 236
Sbjct: 248 Q 248
>gi|126642829|ref|YP_001085813.1| hypothetical protein A1S_2799 [Acinetobacter baumannii ATCC 17978]
Length = 242
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 84/240 (35%), Gaps = 24/240 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ---RPL 57
++ + + L + + FF + GW L+ L + +
Sbjct: 17 LVPLVLGAFFCLYALFYYHLERFFFYHYRLHTLWRFGWLCFWIWLI-GLGYFFNFIKENK 75
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ Q I++LG+G EPS R+ +I
Sbjct: 76 DASQNLPAVKAIIVLGSGVEN--------GEPSAILAKRLDTAA----PVALSQPQAKVI 123
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--- 173
++GG E++V + L + + +D + LE +S T N + S +++
Sbjct: 124 LTGGLDFSEKEPEALVMSRYLKQHFHITKDRMILEDKSTSTELNLKNSKPLLEQAHISVN 183
Query: 174 KNIILVSSAYHLKRSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ I +V+S +H R+ + G + A+ + + Y + + Y + L EY
Sbjct: 184 QPIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAETPLITRYNAWL-REYFAYASGWLLNEY 242
>gi|332637176|ref|ZP_08416039.1| hypothetical protein WcibK1_00657 [Weissella cibaria KACC 11862]
Length = 349
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 83/218 (38%), Gaps = 27/218 (12%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP---AI 85
LF F + +L+ + + K++ + V+LG G T+
Sbjct: 128 LAALFIFARVMELYFMLIFVIFLVSAIVYAAVTRKRESDYYVVLGAGLVNGETVGKLLGN 187
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE-SGVE 144
RI+ + + R F+ +Y TI+ SGG ++E+ + +
Sbjct: 188 RIKAATDAAQRRFDATGVY---------PTIVFSGGKGGDEKVSEAQAMRDYAVATLNYP 238
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFGINTKA 201
D LE QS T +N +FS +I GK + +S YH+ R+ L + F + +
Sbjct: 239 ADKTLLEDQSRTTRENMRFSRDIISKATGKIDPEFVYFTSEYHVFRAGLQARRFDVLAQG 298
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + +Y ++EYI +L + R
Sbjct: 299 RGGN-----------TPFYYRIPAFIREYIAVLNMHRR 325
>gi|302871560|ref|YP_003840196.1| hypothetical protein COB47_0901 [Caldicellulosiruptor obsidiansis
OB47]
gi|302574419|gb|ADL42210.1| protein of unknown function DUF218 [Caldicellulosiruptor
obsidiansis OB47]
Length = 195
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 67/187 (35%), Gaps = 24/187 (12%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +I S +L+F F+ + K + I++LG
Sbjct: 2 RKFSRILLYSMVILIFIFVITEASIIV------------FGISAKPKKSDCIIVLGCAVY 49
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
PS R+ + LYK II+ G ++E+
Sbjct: 50 GN--------FPSPFFRERLNKAFELYKKDYARY----IIVCGAKGAGENISEAEAGKRY 97
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ GV + I E +S T++N ++ K+ I+VS+ +HL+R+ L + I
Sbjct: 98 LIGKGVLPEFILKEDRSFSTYENLLNVKRIMNRRGFKSAIIVSNMFHLERAYLIAKKLKI 157
Query: 198 NTKASCS 204
N S
Sbjct: 158 NASVSGV 164
>gi|251796623|ref|YP_003011354.1| hypothetical protein Pjdr2_2614 [Paenibacillus sp. JDR-2]
gi|247544249|gb|ACT01268.1| protein of unknown function DUF218 [Paenibacillus sp. JDR-2]
Length = 219
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 70/191 (36%), Gaps = 20/191 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ R + F+ L +G +L L SY + + + ++LG
Sbjct: 11 SRKRRGLLLFRLFVGL-CLLGVLCCGYLLW--LINSY----DDSKPIEQADAAIVLGASL 63
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG-DPQKHGLAESIVYN 135
PA++ R+ +LYK K + I+SGG D L E+
Sbjct: 64 WSDKPSPALK--------ERLDFADKLYKDGKVNM----FILSGGLDRNGSKLTEAQGMK 111
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
LL G+ D + L+ + T++N S + +++V+ YH R+ ++
Sbjct: 112 AYLLAKGIPADKMLLDNAARSTYENLLNSKVIAAEHGLNKLLVVTHDYHAPRAMEMARYL 171
Query: 196 GINTKASCSDY 206
+ + +
Sbjct: 172 DYENVTAAAFH 182
>gi|325133332|gb|EGC55998.1| hypothetical protein NMBM13399_2155 [Neisseria meningitidis M13399]
Length = 218
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPLLLVFTSSVWAVYRTGGQVLPPHVRADAALVLGA--------AAWDKRP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + II +GG +K + E+ V L+ GV +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIIFTGGRSKKGYMTEAEVGRRYALKQGVPARNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSATP 179
>gi|184159372|ref|YP_001847711.1| hypothetical protein ACICU_03052 [Acinetobacter baumannii ACICU]
gi|332876210|ref|ZP_08443987.1| hypothetical protein HMPREF0022_03636 [Acinetobacter baumannii
6014059]
gi|183210966|gb|ACC58364.1| uncharacterized conserved protein [Acinetobacter baumannii ACICU]
gi|322509284|gb|ADX04738.1| putative membrane protein [Acinetobacter baumannii 1656-2]
gi|323519312|gb|ADX93693.1| hypothetical protein ABTW07_3273 [Acinetobacter baumannii
TCDC-AB0715]
gi|332735605|gb|EGJ66655.1| hypothetical protein HMPREF0022_03636 [Acinetobacter baumannii
6014059]
Length = 261
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 84/240 (35%), Gaps = 24/240 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ---RPL 57
++ + + L + + FF + GW L+ L + +
Sbjct: 36 LVPLVLGAFFCLYALFYYHLERFFFYHYRLHTLWRFGWLCFWIWLI-GLGYFFNFIKENK 94
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ Q I++LG+G +PS R+ +I
Sbjct: 95 DASQNLPAVKAIIVLGSGVEN--------GQPSAILAKRLDTAA----PVALSQPQAKVI 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--- 173
++GG E++V + L + + +D + LE +S T N + S +++
Sbjct: 143 LTGGLDFSEKEPEALVMSRYLEQHFHIAKDRMILEDKSTSTELNLKNSKPLLEQAHINVN 202
Query: 174 KNIILVSSAYHLKRSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ I +V+S +H R+ + G + A+ + + Y + + Y + L EY
Sbjct: 203 QPIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAETPLITRYNAWL-REYFAYASGWLLNEY 261
>gi|54025401|ref|YP_119643.1| hypothetical protein nfa34310 [Nocardia farcinica IFM 10152]
gi|54016909|dbj|BAD58279.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 315
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
P P IV+LG G +P + P + +R+ S
Sbjct: 145 PNPLPALVGPQTGIVVLGYGL-----LPDGSLRP--ELVNRLTAA----WIQAIASPFSP 193
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
++++GG+PQ +G+ E+ N L+ G+ I +E ++ T QNA FS+ +++++ +
Sbjct: 194 VVVTGGNPQ-NGITEAEAMRNWLVGRGLPAARIHVENRAGSTVQNALFSTRLLRDIGASS 252
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
++V+S H++R+ F GI + + + P +
Sbjct: 253 AVVVTSPNHIRRAVADFIVAGIPVVGAMTSLEQLVSQLPPPPRH 296
>gi|331090798|ref|ZP_08339645.1| hypothetical protein HMPREF9477_00288 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330399906|gb|EGG79565.1| hypothetical protein HMPREF9477_00288 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 241
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/222 (18%), Positives = 87/222 (39%), Gaps = 31/222 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGI--IPTILLKHLQFSYQRPLLS 59
+LS ++ ++ H F + F +L +G+G+ + L Q + L
Sbjct: 10 ILSILYYLLIVIHTHNWKATFARFWAFFGVLQFVVGFGVERMAKWLYLPFQIGFTVAFLV 69
Query: 60 -------------PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKS 106
P D I++LG + R+ S R+ +
Sbjct: 70 FLAVEILILSGMIPSSVDDFFTIIILGA------CVKGKRVTGSL--RKRLDKGAEYLLG 121
Query: 107 CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS 166
+ + +I+SGG + + E+ N LL+ G++ I +E +S T +N ++S
Sbjct: 122 HE----NTKVIVSGGQGKGEDVTEAFAMKNYLLDKGIDGKRIIMEEKSHSTEENLKYSLQ 177
Query: 167 MIKNMQGKNIILVSSAYHLKRSQLYFQHFG---INTKASCSD 205
I + + + + +V++ +H+ R + G +N + SD
Sbjct: 178 YITDTK-EKVGIVTNNFHVYRGIKLAKRVGYKDVNGIPAGSD 218
>gi|225568301|ref|ZP_03777326.1| hypothetical protein CLOHYLEM_04375 [Clostridium hylemonae DSM
15053]
gi|225163020|gb|EEG75639.1| hypothetical protein CLOHYLEM_04375 [Clostridium hylemonae DSM
15053]
Length = 242
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/238 (16%), Positives = 86/238 (36%), Gaps = 37/238 (15%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSF-----IGWGIIPTILLKH------LQFSYQRPLLSPQ 61
W+ ++C L F + + +L ++ ++S +
Sbjct: 28 WNSTFARFWLAAGLACGALWELFQLRPELAGSPLWKLLWIPAAVFAAVEIRIAAGMVSTE 87
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+KD +++LG + + ++ + + +I+SGG
Sbjct: 88 -EKDIPYLIVLGA------------QVKGTKITDSLRRRLKRSAAYLSENPGTKVIVSGG 134
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+AE+ + L + G++R I LE +S T +N +FS++ + +M K + +VS+
Sbjct: 135 QGPGEDIAEAEAMADFLADCGIKRSRILLEDRSKSTEENLRFSAAYLPDMTVK-VGIVSN 193
Query: 182 AYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+H+ R+ Y G N SD ++E+ + +
Sbjct: 194 NFHMYRACCYAGRTGYKNVCRIPSDCSP-----------LLFANYMVREFFAVCRLWL 240
>gi|239502384|ref|ZP_04661694.1| hypothetical protein AbauAB_08717 [Acinetobacter baumannii AB900]
Length = 261
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 24/240 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ---RPL 57
++ + + L + + FF + GW L+ L + +
Sbjct: 36 LVPLVLGAFFCLYALFYYHLERFFFYHYRLHTLWRFGWLCFWIWLI-GLGYFFNFIKENK 94
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ Q I++LG+G +PS R+ +I
Sbjct: 95 DASQNLPAVKAIIVLGSGVEN--------GQPSAILAKRLNTAA----PVALSQPQAKVI 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--- 173
++GG +E++V + L + + +D + LE +S T N + S +++
Sbjct: 143 LTGGLDFSEKESEALVMSRYLEQHFHIAKDRMILEDKSTSTELNLKNSKPLLEQAHINAN 202
Query: 174 KNIILVSSAYHLKRSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ I +V+S +H R+ + G + A+ + + Y + + Y + L EY
Sbjct: 203 QPIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAETPLITRYNAWL-REYFAYASGWLLNEY 261
>gi|293400746|ref|ZP_06644891.1| putative periplasmic protein [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305772|gb|EFE47016.1| putative periplasmic protein [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 189
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 73/171 (42%), Gaps = 21/171 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ F++LF + +L + +P P ++ ++LG ++
Sbjct: 2 ILLIFIILFVLLANL--------YLYHHFPKPK-HPLQDISYDVAIVLGYPCNADGSLST 52
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
++ + R+ + LY H ++ISG Q + E+ L +
Sbjct: 53 VQKK-------RMETAINLYHKHCVHH----LLISGSCVQNTYI-EAEKMAAYALTQKIP 100
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ I LET++ +T++N +++ + Q +NII+++S H++R+ + F
Sbjct: 101 KQAIVLETKARNTYENLKYAKCICDENQWENIIVITSPSHMRRAAFFVHKF 151
>gi|184155411|ref|YP_001843751.1| hypothetical protein LAF_0935 [Lactobacillus fermentum IFO 3956]
gi|183226755|dbj|BAG27271.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
gi|299783224|gb|ADJ41222.1| Putative uncharacterized protein [Lactobacillus fermentum CECT
5716]
Length = 308
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 77/201 (38%), Gaps = 22/201 (10%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+ + + +L R + + + ++ ++ I +L + +
Sbjct: 91 LVMVFAPLFPVLWLLWRSVLIVKLMLAIYGYVAVLIDAYLL--------ATVINALPLTI 142
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
I++LG G P +R R+ + LY+ + +I+SGG
Sbjct: 143 KPTKILILGAGLIKGGVGPVLRR--------RLLGGLALYQRFPKAE----LIMSGGQGD 190
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E++ + + GV I+LET S +T N + I G ++LV+S YH
Sbjct: 191 DEPEPEAVAMHRFARQKGVPESAIRLETNSTNTATNLSEAKRFI--NSGDRVVLVTSDYH 248
Query: 185 LKRSQLYFQHFGINTKASCSD 205
L RS LY + G+N +
Sbjct: 249 LLRSLLYARRQGVNCQGLAVH 269
>gi|324998768|ref|ZP_08119880.1| hypothetical protein PseP1_08384 [Pseudonocardia sp. P1]
Length = 346
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 86/228 (37%), Gaps = 36/228 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+L + L F+ + + + L R + + +V+LG+
Sbjct: 127 MLTGPVWLRALWILCALAAYFLAFQFVAFLGYARLYRWLVRD-------RPADWVVVLGS 179
Query: 75 GT--TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G + +P + A RI R M +++SGG LAE
Sbjct: 180 GLHGSAVPPLLADRIRAGMTELDRRGARM--------------LVLSGGKGDDERLAEGE 225
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQL 190
++ G + ++ ET S T QN + S +++ ++V+S YH+ R+ +
Sbjct: 226 AMRRWAVDHGADPALLRAETASRTTEQNLRLSDELVRGDPDPAGPGLIVTSDYHVFRAAV 285
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ G++ +A+ + +A +Y L+E++ IL +
Sbjct: 286 LARRLGVDAQAAGAP-----------TAGYYWPSAVLREFVAILREHR 322
>gi|37520492|ref|NP_923869.1| hypothetical protein glr0923 [Gloeobacter violaceus PCC 7421]
gi|35211486|dbj|BAC88864.1| glr0923 [Gloeobacter violaceus PCC 7421]
Length = 239
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/231 (19%), Positives = 84/231 (36%), Gaps = 38/231 (16%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIV 70
+W I ++ +LL F L L + P + IV
Sbjct: 43 WWIRPLPWKIPISVLAIALLLVYFAAVSPPALALADAQLGDYPEAP-----SNLKADAIV 97
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G + ++R+ RL+++ + I ISG +
Sbjct: 98 VLGRGERL--------------RHTRVELAARLWRAGR----APRIFISG-------RND 132
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ L G+ + E S T +NA+F++ +++ + ++LV+ A H+ RS
Sbjct: 133 ADTMVADLRRMGLPAKAVAGEECSRTTQENAEFTARILRPAGVRTLLLVTDAPHMLRSLR 192
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
F+ G N+ A S + + ++EY+G+L + G
Sbjct: 193 TFKEAGFNSAAVTSPFPEKLSE-------LRERLIVVREYLGLLTYRWLGR 236
>gi|320531184|ref|ZP_08032171.1| integral membrane protein with DUF218 domain protein [Actinomyces
sp. oral taxon 171 str. F0337]
gi|320136601|gb|EFW28562.1| integral membrane protein with DUF218 domain protein [Actinomyces
sp. oral taxon 171 str. F0337]
Length = 355
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 60/149 (40%), Gaps = 14/149 (9%)
Query: 94 YSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
SRI + ++ + +++ SGG ++E+ + + G+ I LE
Sbjct: 189 GSRIAGGIDAWREEEALRPGAPLLVMSGGQGVDEPVSEARAMADYAIARGIPPKRILLED 248
Query: 153 QSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
+S T N + ++ ++LV+S++H R+ + G+ + +
Sbjct: 249 RSTTTRTNISCTRDLLAERGMVDPQVLLVTSSFHAVRTAILASDMGVPWAVAPA------ 302
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYR 239
+A FY+ L+EY+ +L R
Sbjct: 303 -----RTAWFYIVNAWLREYVAVLTYRRR 326
>gi|283456241|ref|YP_003360805.1| hypothetical protein BDP_1370 [Bifidobacterium dentium Bd1]
gi|283102875|gb|ADB09981.1| Conserved hypothetical protein [Bifidobacterium dentium Bd1]
Length = 208
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 13/138 (9%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q K + +++LG R PS R+ + + C I+SG
Sbjct: 54 QGKPGLDYVIVLGA--------QVHRARPSRVLKFRLDKAIEYLND--NPKTIC--IVSG 101
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ + L +G+ I E++S T +N S +I + ++ +++
Sbjct: 102 GQGSNEPFPEAQGMADYLKTNGIAESRIVEESKSKTTEENIINSKKLIADEN-ASVGIIT 160
Query: 181 SAYHLKRSQLYFQHFGIN 198
+ +H+ R+ + G++
Sbjct: 161 NDFHVFRALQIARKNGLD 178
>gi|257467698|ref|ZP_05631794.1| hypothetical protein FulcA4_00092 [Fusobacterium ulcerans ATCC
49185]
gi|317061992|ref|ZP_07926477.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
gi|313687668|gb|EFS24503.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
Length = 244
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 67/177 (37%), Gaps = 24/177 (13%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+++LG G PS R+ + ++ +K + I+SGG
Sbjct: 88 PKVKYLIVLGAGLKGD--------IPSEVLKYRLNKAVKYFKE----NPDTIFIVSGGQG 135
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS-SA 182
+ ++E+ L E G+ +I E +S T++N +FS +IK + I V ++
Sbjct: 136 KDELISEAEAMEIYLSERGIPIKNIIKEDKSTSTYENLKFSDKIIKEKEITGDIAVMFNS 195
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+H+ R ++ + K ++ + L+EY Y +
Sbjct: 196 FHMYRVKMISKKLNFPLKTVYAE-----------TPAIVFPNYMLREYFAFFNEYRK 241
>gi|260548892|ref|ZP_05823114.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
gi|260408060|gb|EEX01531.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
Length = 261
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/240 (17%), Positives = 85/240 (35%), Gaps = 24/240 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ---RPL 57
++ + + L + + FF + GW L+ L + +
Sbjct: 36 IVPLILGAFFCLYALFYYHLERFFFYHYRLHSVWRFGWLCFWIWLI-GLGYFFSFIKENK 94
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
S Q I++LG+G PS R+ +I
Sbjct: 95 NSSQNLPAVKAIIVLGSGVEN--------GRPSAILAKRLDTAA----PVALSQPQAKVI 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--- 173
++GG E++V + L + + ++ + LE +S T N + S +++
Sbjct: 143 LTGGLDFSEKEPEALVMSRYLEQHFHIAKERMILEDKSTSTELNLKNSKPLLEQAHISID 202
Query: 174 KNIILVSSAYHLKRSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ I +V+S +H R+ + G I T A+ + ++ Y + + Y + L EY
Sbjct: 203 QPIAIVTSDFHTPRAAAIAKKQGYTHIYTVAAETPLVSRYNAWL-REYFAYASGWILNEY 261
>gi|330793832|ref|XP_003284986.1| hypothetical protein DICPUDRAFT_148822 [Dictyostelium purpureum]
gi|325085107|gb|EGC38521.1| hypothetical protein DICPUDRAFT_148822 [Dictyostelium purpureum]
Length = 549
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 13/143 (9%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
L S Q + I++LG ++ P P+ R+ + Y + + +
Sbjct: 120 LDSQQPVEYDTAIIVLG--YSLHPD-----GMPTQILKERVVLAAQYYAQLQGEGSNIKL 172
Query: 117 IISGGDPQKHGL------AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
I+SG +E+ N L + V DI +E S +T +NA+++ +K
Sbjct: 173 ILSGKSKATSFEEDQGFNSEAEAMNEIALHNDVPARDIMIENNSTNTAENAKYTLEFLKQ 232
Query: 171 MQGKNIILVSSAYHLKRSQLYFQ 193
+ + +V+S +H+ RSQ FQ
Sbjct: 233 HNIQRLFIVTSDFHVLRSQYIFQ 255
>gi|325127259|gb|EGC50197.1| hypothetical protein NMXN1568_2007 [Neisseria meningitidis N1568]
Length = 214
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKRP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + II +GG +K + E+ V L+ G+ +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSATP 179
>gi|213157818|ref|YP_002320616.1| hypothetical protein AB57_3302 [Acinetobacter baumannii AB0057]
gi|213056978|gb|ACJ41880.1| conserved hypothetical protein [Acinetobacter baumannii AB0057]
Length = 189
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 68/179 (37%), Gaps = 20/179 (11%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ Q I++LG+G +PS R+ +I+
Sbjct: 24 ASQNLPAVKAIIVLGSGVEN--------GQPSAILAKRLDTAA----PVALSQPQAKVIL 71
Query: 119 SGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---K 174
+GG +E++V + L + + +D + LE +S T N + S +++ +
Sbjct: 72 TGGLDFSEKESEALVMSRYLEQHFHIAKDRMILEDKSTSTELNLKNSKPLLEQAHINANQ 131
Query: 175 NIILVSSAYHLKRSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
I +V+S +H R+ + G + A+ + + Y + + Y + L EY
Sbjct: 132 PIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAETPLITRYNAWL-REYFAYASGWLLNEY 189
>gi|313669320|ref|YP_004049604.1| periplasmic protein [Neisseria lactamica ST-640]
gi|313006782|emb|CBN88252.1| putative periplasmic protein [Neisseria lactamica 020-06]
Length = 218
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKRP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + II +GG +K + E+ V L+ G+ +I
Sbjct: 68 SPVFQERINHAIALYQSRRVG----KIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEIAEDLGVRVYMSATP 179
>gi|116334369|ref|YP_795896.1| hypothetical protein LVIS_1800 [Lactobacillus brevis ATCC 367]
gi|116099716|gb|ABJ64865.1| hypothetical protein LVIS_1800 [Lactobacillus brevis ATCC 367]
Length = 329
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 85/226 (37%), Gaps = 26/226 (11%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPT-ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+R+ F F SFI I IL Y R + + + IV+LG G
Sbjct: 111 LRESNFADSFWPWLSFIPIFSIYLGILFGASIIGYLRANVW--RARRADTIVILGAGL-- 166
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ +R+ ++L + T+I++GG L E+ L
Sbjct: 167 -----RHGSQIGRTLANRLDAALKLAHRQSTPT---TLIVTGGQGPDEHLTEAEAMTTYL 218
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFG 196
+ G ++ I E+++ T N +S + + G +++V++ YHL R++ G
Sbjct: 219 VNHGWPQERIIQESRATSTLTNLLYSQRLWSQLPHQGGRVVIVTNNYHLFRAEHLASQLG 278
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
+ + YL +E++ I++ + R +R
Sbjct: 279 LLLGGYPAPTRRG-----------YLPAAWAREFLAIIMLHPRLHR 313
>gi|326561174|gb|EGE11539.1| hypothetical protein E9G_04999 [Moraxella catarrhalis 7169]
gi|326567938|gb|EGE18035.1| hypothetical protein E9Q_04434 [Moraxella catarrhalis BC1]
Length = 252
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 22/219 (10%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+S++ I +L+ I L L Y L + D IV+LG G T
Sbjct: 21 KSLKFIAVGGAVILIGVASALTPIFANLGVSLLNLYSA-LTLATVQDDATSIVVLGGGLT 79
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
A I + + SR + L+K +II SG AES +
Sbjct: 80 KN---SAGTISLNHFTQSRANAAIHLHKLYP-----LSIITSG--------AESPWLRDY 123
Query: 138 LLESGVERDD--IKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVSSAYHLKRSQLYFQH 194
L+E + R I E S++T +NA F++ ++ + + + LV+ YH+ R++ F
Sbjct: 124 LIE-HIGRTKVVIINENASMNTCENAVFTAKLLSHHELSTTVYLVTDRYHMARARRQFAK 182
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
GI+T + + L S N T + E + +
Sbjct: 183 AGIHTIPAPAP-LAIRSSWQNPKDNLIHTRRTIYELVAL 220
>gi|309379839|emb|CBX21615.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 218
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKRP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + II +GG +K + E+ V L+ G+ +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEIAEDLGVRVYMSATP 179
>gi|313897329|ref|ZP_07830872.1| conserved hypothetical protein [Clostridium sp. HGF2]
gi|312957699|gb|EFR39324.1| conserved hypothetical protein [Clostridium sp. HGF2]
Length = 192
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 49 LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
L + P PQ + ++ ++LG+ ++ ++ R+ + LYK +
Sbjct: 18 LYHYFPTPP-KPQSDRVYDVAIVLGSPAEEDGSLSRVQKT-------RMDAAITLYKEKR 69
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
I+ISGG + + E+ + + + + LE Q+ +T++N ++ ++
Sbjct: 70 VRC----ILISGGSVR-NTYTEADIMAAYAIRCSIPSTALLLERQAKNTYENLLYAKTLC 124
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQHF 195
K++I+V+S +H++R+ + F
Sbjct: 125 DAHAWKHVIVVTSCFHVRRASYMVRKF 151
>gi|257455873|ref|ZP_05621092.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
gi|257446721|gb|EEV21745.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
Length = 225
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 89/221 (40%), Gaps = 26/221 (11%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
++ ++ + + + + C + L F + + ++ + Y+ P + IV+
Sbjct: 14 FFSIIKRILTVVVLVGCLITLSFF---TPLFSTIVLFILDCYRLPESAVSVNP-ATAIVV 69
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG G T I + + SR+ + ++Y+ II+SG E+
Sbjct: 70 LGGGLTNN---QQNEIVINQFTESRLIKASQVYQQ-----TGLPIIVSG--------KEA 113
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L + G+ + E S +T QNA++++ M+ K +ILV+ AYH+ RS+
Sbjct: 114 PWMAKWLQKKGI--MWVLAEKNSFNTCQNAKYTAEMV---NVKQVILVTDAYHMNRSRRQ 168
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
F + T S + A N + AL E +
Sbjct: 169 FAINDVATIPSIAPLPKAN-DWQHFDQNLQHSRRALYELLA 208
>gi|193078251|gb|ABO13211.2| putative membrane protein [Acinetobacter baumannii ATCC 17978]
Length = 261
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 84/240 (35%), Gaps = 24/240 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ---RPL 57
++ + + L + + FF + GW L+ L + +
Sbjct: 36 LVPLVLGAFFCLYALFYYHLERFFFYHYRLHTLWRFGWLCFWIWLI-GLGYFFNFIKENK 94
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ Q I++LG+G EPS R+ +I
Sbjct: 95 DASQNLPAVKAIIVLGSGVEN--------GEPSAILAKRLDTAA----PVALSQPQAKVI 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--- 173
++GG E++V + L + + +D + LE +S T N + S +++
Sbjct: 143 LTGGLDFSEKEPEALVMSRYLKQHFHITKDRMILEDKSTSTELNLKNSKPLLEQAHISVN 202
Query: 174 KNIILVSSAYHLKRSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ I +V+S +H R+ + G + A+ + + Y + + Y + L EY
Sbjct: 203 QPIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAETPLITRYNAWL-REYFAYASGWLLNEY 261
>gi|169632529|ref|YP_001706265.1| hypothetical protein ABSDF0656 [Acinetobacter baumannii SDF]
gi|169151321|emb|CAP00033.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter baumannii]
Length = 261
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 84/240 (35%), Gaps = 24/240 (10%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ---RPL 57
++ + + L + + FF + GW L+ L + +
Sbjct: 36 LVPLVLGAFFCLYALFYYHLERFFFYHYRLHTLWRFGWFCFWIWLI-GLGYFFNFIKENK 94
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ Q I++LG+G +PS R+ +I
Sbjct: 95 DASQNLPAVKAIIVLGSGVEN--------GQPSAILAKRLDTAA----PVALSQPQAKVI 142
Query: 118 ISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--- 173
++GG E++V + L + + +D + LE +S T N + S +++
Sbjct: 143 LTGGLDFSEKEPEALVMSRYLKQHFHITKDRMILEDKSTSTELNLKNSKPLLEQAHINVN 202
Query: 174 KNIILVSSAYHLKRSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ I +V+S +H R+ + G + A+ + + Y + + Y + L EY
Sbjct: 203 QPIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAETPLITRYNAWL-REYFAYASGWLLNEY 261
>gi|308388228|gb|ADO30548.1| putative periplasmic protein [Neisseria meningitidis alpha710]
Length = 214
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKHP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + I+ +GG +K + E+ V L+ GV +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSATP 179
>gi|281492320|ref|YP_003354300.1| hypothetical protein LLKF_1900 [Lactococcus lactis subsp. lactis
KF147]
gi|281375984|gb|ADA65475.1| Hypothetical protein LLKF_1900 [Lactococcus lactis subsp. lactis
KF147]
Length = 361
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 39/241 (16%)
Query: 2 LLSWIFLIVSYWHL-----LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
++ FL+V + HL I + +L ++ W L + R
Sbjct: 122 IVVLTFLVVDWIHLSMGRLPDSWIWLKILGMVYPILSIYLAWQFGIFFLSSWVYGRRVR- 180
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
K+ N V+LG G +RI ++ + + +
Sbjct: 181 ------KQRANYYVVLGAGLIQ-------GEHVGKLLGNRILAAVKAVRDNET-----IL 222
Query: 117 IISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+ SGG ++E+ +E G + LE QS T++N FSS +I+
Sbjct: 223 VFSGGQGPDEKVSEARAMQRYAVEVLGFPIERTMLEDQSRTTYENLVFSSQLIRE----K 278
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +S YH+ R+ L+ + + +A +Y ++E+I +L
Sbjct: 279 FLFFTSDYHVFRAALFAAMLKLEAQG----------GKGGKTAMYYRVPAFIREFIAVLN 328
Query: 236 A 236
Sbjct: 329 Y 329
>gi|227515109|ref|ZP_03945158.1| membrane protein [Lactobacillus fermentum ATCC 14931]
gi|227086441|gb|EEI21753.1| membrane protein [Lactobacillus fermentum ATCC 14931]
Length = 308
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 78/201 (38%), Gaps = 22/201 (10%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+ + + +L R + + + ++ ++ I +L + +
Sbjct: 91 LVMVFAPLFPVLWLLWRSVLTVKLMLAIYGYVAVLIDAYLL--------ATVINALPLTI 142
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
I++LG G P +R R+ + LY+ + +I+SGG
Sbjct: 143 KPTKILILGAGLIKGGVGPVLRR--------RLLGGLALYQRFPKAE----LIMSGGQGD 190
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E++ + + GV + I+LET S +T N + I G ++LV+S YH
Sbjct: 191 DEPEPEAVAMHRFARQKGVPKSAIRLETNSTNTATNLSEAKRFI--NSGDRVVLVTSDYH 248
Query: 185 LKRSQLYFQHFGINTKASCSD 205
L RS LY + G+N +
Sbjct: 249 LLRSLLYARRQGVNCQGLAVH 269
>gi|260557220|ref|ZP_05829436.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Acinetobacter
baumannii ATCC 19606]
gi|260409326|gb|EEX02628.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Acinetobacter
baumannii ATCC 19606]
Length = 178
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 20/179 (11%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ Q I++LG+G EPS R+ +I+
Sbjct: 13 ASQNLPAVKAIIVLGSGVEN--------GEPSAILAKRLDTAA----PVALSQPQAKVIL 60
Query: 119 SGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---K 174
+GG E++V + L + + +D + LE +S T N + S +++ +
Sbjct: 61 TGGLDFSEKEPEALVMSRYLKQHFHITKDRMILEDKSTSTELNLKNSKPLLEQAHISVNQ 120
Query: 175 NIILVSSAYHLKRSQLYFQHFG---INTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
I +V+S +H R+ + G + A+ + + Y + + Y + L EY
Sbjct: 121 PIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAETPLITRYNAWL-REYFAYASGWLLNEY 178
>gi|121605279|ref|YP_982608.1| hypothetical protein Pnap_2380 [Polaromonas naphthalenivorans CJ2]
gi|120594248|gb|ABM37687.1| protein of unknown function DUF218 [Polaromonas naphthalenivorans
CJ2]
Length = 253
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/243 (18%), Positives = 91/243 (37%), Gaps = 43/243 (17%)
Query: 2 LLSWIFLIVSYW--HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+L ++ + + W L + ++ F++ L F LL Q L
Sbjct: 44 VLVFLGSVQAPWQHWLAWKWVQAGFWLWLVSLGAFF--------GLLALRQQGQNLQGLR 95
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P+ +IV+LG+ P+ Q + E + L + Q +I+S
Sbjct: 96 PE------VIVVLGS------------STPNAQPSPTLAERLNLAYTLAQQHPKARVIVS 137
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---I 176
GG + ++E+ V L G+++ I +E +S T +N +S +++
Sbjct: 138 GGVDFRQTVSEASVMATYLEAKGLDKSRILVEDRSTSTHENLVYSLRLLQAGGQTPQAAT 197
Query: 177 ILVSSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+LV+S +H R+ ++ G N + + + + L+EY +
Sbjct: 198 VLVTSDFHTLRASWIAKNAGWKNVVTAGAP-----------TPLYMRYNAWLREYFAFVS 246
Query: 236 AYY 238
+
Sbjct: 247 GWL 249
>gi|121635807|ref|YP_976052.1| putative periplasmic protein [Neisseria meningitidis FAM18]
gi|120867513|emb|CAM11290.1| putative periplasmic protein [Neisseria meningitidis FAM18]
gi|254672612|emb|CBA06344.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
gi|325131248|gb|EGC53960.1| hypothetical protein NMBM6190_2077 [Neisseria meningitidis M6190]
gi|325137422|gb|EGC60010.1| hypothetical protein NMBES14902_2053 [Neisseria meningitidis
ES14902]
Length = 218
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKRP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + I+ +GG +K + E+ V L+ GV +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIDSVVIVSDPYHLARAAEMAEDLGVRVYMSATP 179
>gi|166714094|ref|ZP_02245301.1| hypothetical protein Xoryp_22305 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 205
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 73/199 (36%), Gaps = 21/199 (10%)
Query: 33 FSFIGWGI---IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
GWG +P ++ + + ++I++LG A P
Sbjct: 12 LGLFGWGWRLCMPALIWLVAVTGWIVWIGDRDQAAPADVIIVLGA--------AAYDARP 63
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY ++ +GG AES V L G+ + I
Sbjct: 64 SPVFEERIRHALDLYAQ----GYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIV 119
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS----- 204
+ET S T QN + + ++++ I+VS H+ R+ Q GI+ AS +
Sbjct: 120 IETTSRTTRQNLEQARTLMERHGMHRAIIVSDPLHMARALRLSQELGIDALASSTPSTRF 179
Query: 205 -DYLNAYYSIIPLSANFYL 222
+ ++ ++ F+
Sbjct: 180 RSFHTSWRFLLQEVYYFHR 198
>gi|254671270|emb|CBA08572.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
Length = 218
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKRP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + II +GG +K + E+ V L+ G+ +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSATP 179
>gi|84621867|ref|YP_449239.1| hypothetical protein XOO_0210 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188574494|ref|YP_001911423.1| hypothetical protein PXO_03633 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58424447|gb|AAW73484.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84365807|dbj|BAE66965.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188518946|gb|ACD56891.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 205
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 74/199 (37%), Gaps = 21/199 (10%)
Query: 33 FSFIGWGI---IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+GWG +P ++ + + ++I++LG A P
Sbjct: 12 LGLLGWGWRLCMPALIWLVAVAGWIVWIGDRDQAAPADVIIVLGA--------AAYDARP 63
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY ++ +GG AES V L G+ + I
Sbjct: 64 SPVFEERIRHALDLYAQ----GYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIV 119
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS----- 204
+ET S T QN + + ++++ I+VS H+ R+ Q GI+ AS +
Sbjct: 120 IETTSRTTRQNLEQARTLMERHGMHRAIIVSDPLHMARALRLSQELGIDALASSTPSTRF 179
Query: 205 -DYLNAYYSIIPLSANFYL 222
+ ++ ++ F+
Sbjct: 180 RSFHTSWRFLLQELYYFHR 198
>gi|325143399|gb|EGC65728.1| hypothetical protein NMB9615945_0016 [Neisseria meningitidis
961-5945]
Length = 218
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKRP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + II +GG +K + E+ V L+ G+ +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIIFTGGRSKKGYMTEAEVGRRYALKQGIPPRNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSATP 179
>gi|261391563|emb|CAX48996.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
8013]
Length = 218
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKRP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + I+ +GG +K + E+ V L+ GV +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIDSVVIVSDPYHLARAAEMAEDLGVRVYMSATP 179
>gi|34499564|ref|NP_903779.1| hypothetical protein CV_4109 [Chromobacterium violaceum ATCC 12472]
gi|34105415|gb|AAQ61770.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 199
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 65/170 (38%), Gaps = 17/170 (10%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ ++LG A +PS RI ++LY+S K I+ +GG P
Sbjct: 39 PGADAALVLGA--------AAWGNKPSPVFRERINHAVKLYQSGKVRW----IVFTGGTP 86
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ AE+ V GV + +E QS T+QN + + ++ +LVS
Sbjct: 87 EPGYPAEADVGREFAARQGVPMTAMLVENQSRTTWQNLSNARDLGNQFGIRSYLLVSDPL 146
Query: 184 HLKRSQLYFQHFGINTKASCSDY-----LNAYYSIIPLSANFYLTELALK 228
H++R+ L G+ + + L ++ + Y+ +
Sbjct: 147 HMRRAVLMAGDLGLRAYPAPTQSSRFRTLASWSRFLARETWLYVGYRVFR 196
>gi|326561612|gb|EGE11950.1| hypothetical protein E9M_05753 [Moraxella catarrhalis 46P47B1]
gi|326567638|gb|EGE17746.1| hypothetical protein E9O_00430 [Moraxella catarrhalis 12P80B1]
gi|326574024|gb|EGE23973.1| hypothetical protein E9W_05894 [Moraxella catarrhalis CO72]
Length = 252
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 53/219 (24%), Positives = 88/219 (40%), Gaps = 22/219 (10%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+S++ I S +L+ I L L Y L + D IV+LG G T
Sbjct: 21 KSLKFIAVGSTVILIGIASALTPIFANLGVGLLNLYSA-LTLATVQDDATSIVVLGGGLT 79
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
A I + + SR + L+K +II SG AES +
Sbjct: 80 KN---SAGTISLNHFTQSRANAAIHLHKLYP-----LSIITSG--------AESPWLRDY 123
Query: 138 LLESGVERDD--IKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVSSAYHLKRSQLYFQH 194
L+E + R I E S++T +NA F++ ++ + + + LV+ YH+ R++ F
Sbjct: 124 LIE-HIGRTKVVIINENASMNTCENAVFTAKLLSHHELSTTVYLVTDRYHMARARRQFAK 182
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
GI+T + + L S N T + E + +
Sbjct: 183 AGIHTIPAPAP-LAIRSSWQNPKDNLIHTRRTIYELVAL 220
>gi|89069286|ref|ZP_01156649.1| hypothetical protein OG2516_14486 [Oceanicola granulosus HTCC2516]
gi|89045162|gb|EAR51230.1| hypothetical protein OG2516_14486 [Oceanicola granulosus HTCC2516]
Length = 156
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 65/173 (37%), Gaps = 21/173 (12%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
I++LG P +R R LY + + +I GG + H
Sbjct: 2 TAILILGAAVWPHGPSPTLRR--------RTLHAAGLYHAGRGR----LLIPCGGQGR-H 48
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
G E+ V LL +GV I E +S T++N F+ ++ +++V+ YH+
Sbjct: 49 GPPEAEVMRALLLGAGVPDAAILQERRSTSTWENLLFARPLLAAQGETRVLIVTDRYHVP 108
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R++L + G+ + ++ AL+E ++ R
Sbjct: 109 RARLAARRMGLTAAGAPPPLRGSHVPT--------QLRQALREVPALVWYAMR 153
>gi|237746467|ref|ZP_04576947.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377818|gb|EEO27909.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 203
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 70/189 (37%), Gaps = 28/189 (14%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+S+R + + + + F + T+ KK + ++LG
Sbjct: 2 KKSLRILVIAAFLFVAYIFCSIALFSTV----------------DQKKTADAAIILGA-- 43
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
A PS RI + LY++ +I++GG + +E+ V
Sbjct: 44 ------AAWYKRPSPVFEERIRHGLWLYENGYVR----KLILTGGKSKNAPYSEAFVARR 93
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L + +DI +E S T +N + ++++ ++VS H+KR+ G
Sbjct: 94 YALSHAIPENDILIEEASQTTRENLLNAKAIMQANGLSTALIVSDPIHMKRAMHIAGDIG 153
Query: 197 INTKASCSD 205
+ +S +
Sbjct: 154 MTAWSSPTP 162
>gi|171742688|ref|ZP_02918495.1| hypothetical protein BIFDEN_01802 [Bifidobacterium dentium ATCC
27678]
gi|171278302|gb|EDT45963.1| hypothetical protein BIFDEN_01802 [Bifidobacterium dentium ATCC
27678]
Length = 236
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 13/138 (9%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q K + +++LG R PS R+ + + C I+SG
Sbjct: 82 QGKPGLDYVIVLGA--------QVHRARPSRVLKFRLDKAIEYLND--NPKTIC--IVSG 129
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ + L +G+ I E++S T +N S +I + ++ +++
Sbjct: 130 GQGSNEPFPEAQGMADYLKTNGIAESRIVEESKSKTTEENIINSKKLIADEN-ASVGIIT 188
Query: 181 SAYHLKRSQLYFQHFGIN 198
+ +H+ R+ + G++
Sbjct: 189 NDFHVFRALQIARKNGLD 206
>gi|144900194|emb|CAM77058.1| Protein of unknown function DUF218 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 167
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 21/160 (13%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG T PS R+ L +++SGG H
Sbjct: 13 IVLGAKVMADGT-------PSPALARRVAHAATL----VHSGRVAHLLMSGGAVN-HPTP 60
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E++V + + +G++ D I +E QS +T NA++ + +I ++LV+ ++HL R++
Sbjct: 61 EALVMRDLAMAAGIDADRIVVEDQSRNTIGNARYCAPIIVAQGWTRLLLVTDSFHLPRAR 120
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
L F G+ S + P S N L+E
Sbjct: 121 LIFARHGLKVALSGAR---------PESVNAEWVMAHLRE 151
>gi|260662077|ref|ZP_05862973.1| conserved hypothetical protein [Lactobacillus fermentum 28-3-CHN]
gi|260553460|gb|EEX26352.1| conserved hypothetical protein [Lactobacillus fermentum 28-3-CHN]
Length = 308
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 77/201 (38%), Gaps = 22/201 (10%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+ + + +L R + + + ++ ++ I +L + +
Sbjct: 91 LVMVFAPLFPVLWLLWRSVLIVKLMLAIYGYVAVLIDAYLL--------ATVINALPLTI 142
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
I++LG G P +R R+ + LY+ + +I+SGG
Sbjct: 143 KPTKILILGAGLIKGGVGPVLRR--------RLLGGLALYQCFPKAE----LIMSGGQGD 190
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E++ + + GV I+LET S +T N + I G ++LV+S YH
Sbjct: 191 DEPEPEAVAMHRFARQKGVPESAIRLETNSTNTATNLSEAKRFI--NSGDRVVLVTSDYH 248
Query: 185 LKRSQLYFQHFGINTKASCSD 205
L RS LY + G+N +
Sbjct: 249 LLRSLLYARRQGVNCQGLAVH 269
>gi|282857535|ref|ZP_06266763.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
gi|282584622|gb|EFB89962.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
Length = 259
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/252 (18%), Positives = 94/252 (37%), Gaps = 33/252 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L + FL+V R + + + F+F +L L+ P +
Sbjct: 23 LAASFFLLVIPAGKWPPKRRLLLGLLTLL--FAFSCTDFCGKKMLAFLEA--LTPEARGE 78
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ ++++LG G +PS S R+ + + C +++SG
Sbjct: 79 RRGRPAVVLVLGGGAVAE----GQTYQPSVSSQRRLRKAREILSCC----GDGKLLLSG- 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-----NMQGKNI 176
ES + L + R+ + LET+SL+T N + S+ +++ +
Sbjct: 130 -------IESPLMARWLRA-SLPREKVLLETRSLNTEGNLRESAVLLRRLYSDERSRPQV 181
Query: 177 ILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNA-----YYSIIPLSANFYLTELALKE 229
LV+ +H+ R+ + + F S + L + +P LT +A +E
Sbjct: 182 FLVTDRFHMARAWRWAKKFMPDFEVVPSPAPSLVRDAPWHPVNFVPTCRGLELTSMAWRE 241
Query: 230 YIGILIAYYRGN 241
+ +L + R +
Sbjct: 242 TLALLRDWCRSH 253
>gi|326563988|gb|EGE14237.1| hypothetical protein E9K_05094 [Moraxella catarrhalis 103P14B1]
gi|326569481|gb|EGE19541.1| hypothetical protein E9U_07596 [Moraxella catarrhalis BC8]
gi|326577008|gb|EGE26903.1| hypothetical protein E9Y_00691 [Moraxella catarrhalis 101P30B1]
gi|326577466|gb|EGE27350.1| hypothetical protein EA1_03565 [Moraxella catarrhalis O35E]
Length = 252
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 22/219 (10%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+S++ I +L+ I L L Y L + D IV+LG G T
Sbjct: 21 KSLKFIAVGGTVILIGIASALTPIFANLGVGLLNLYSA-LTLATVQDDATSIVVLGGGLT 79
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
A I + + SR + L+K +II SG AES +
Sbjct: 80 KN---SAGTISLNHFTQSRANAAIHLHKLYP-----LSIITSG--------AESPWLRDY 123
Query: 138 LLESGVERDD--IKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVSSAYHLKRSQLYFQH 194
L+E + R I E S++T +NA F++ ++ + + + LV+ YH+ R++ F
Sbjct: 124 LIE-HIGRTKVVIINENASMNTCENAVFTAKLLSHHELSTTVYLVTDRYHMARARRQFAK 182
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
GI+T + + L S N T + E + +
Sbjct: 183 AGIHTIPAPAP-LAIRSSWQNPKDNLIHTRRTIYELVAL 220
>gi|42782182|ref|NP_979429.1| hypothetical protein BCE_3127 [Bacillus cereus ATCC 10987]
gi|42738107|gb|AAS42037.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 210
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 6 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYR---FKTDDSVKTDAGIVLGA-- 55
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 56 ------ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 106 YAMKQGVKEEDILIETKSLFTEENLKNAKEVGTENGIRTYTIVSDPLHMKRAMRIAKHIN 165
Query: 197 INTKASCSD 205
I AS +
Sbjct: 166 IEAYASPTP 174
>gi|325203138|gb|ADY98591.1| conserved hypothetical protein [Neisseria meningitidis M01-240355]
Length = 218
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKHP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + I+ +GG +K + E+ V L+ GV +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSATP 179
>gi|218767273|ref|YP_002341785.1| putative periplasmic protein [Neisseria meningitidis Z2491]
gi|121051281|emb|CAM07557.1| putative periplasmic protein [Neisseria meningitidis Z2491]
gi|319409538|emb|CBY89825.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
WUE 2594]
Length = 218
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKHP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + I+ +GG +K + E+ V L+ GV +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSATP 179
>gi|15675952|ref|NP_273070.1| EpiH/GdmH-related protein [Neisseria meningitidis MC58]
gi|7225229|gb|AAF40483.1| EpiH/GdmH-related protein [Neisseria meningitidis MC58]
gi|316984529|gb|EFV63495.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
gi|325129274|gb|EGC52113.1| hypothetical protein NMBOX9930304_1979 [Neisseria meningitidis
OX99.30304]
gi|325139474|gb|EGC62014.1| periplasmic protein [Neisseria meningitidis CU385]
gi|325199239|gb|ADY94694.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
Length = 214
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKRP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + I+ +GG +K + E+ V L+ GV +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSATP 179
>gi|229491563|ref|ZP_04385384.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229321244|gb|EEN87044.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length = 140
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
G IV+LG G T+ + + R+ ++L + Q II SG
Sbjct: 4 DLNPVGTNIVVLGAGLFDDGTMRPMLV-------DRLQAALQLARQYPQS----PIITSG 52
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P+ G+ E+ L+ +GV I E S T +NA S+ ++ + +++VS
Sbjct: 53 GAPKA-GVTEARAMREWLVANGVNPGRITEEGTSWSTVENAINSARILADRGATGVVVVS 111
Query: 181 SAYHLKRSQLYFQHFGINTKASC 203
SA H++R+ + F+ +
Sbjct: 112 SANHVERAMVDFRVAVLGRIPVA 134
>gi|15673711|ref|NP_267885.1| hypothetical protein L169301 [Lactococcus lactis subsp. lactis
Il1403]
gi|12724748|gb|AAK05827.1|AE006403_5 hypothetical protein L169301 [Lactococcus lactis subsp. lactis
Il1403]
gi|326407195|gb|ADZ64266.1| conserved hypothetical protein [Lactococcus lactis subsp. lactis
CV56]
Length = 361
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 39/241 (16%)
Query: 2 LLSWIFLIVSYWHL-----LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP 56
++ FL+V + HL I + +L ++ W L + R
Sbjct: 122 IVVLTFLVVDWIHLSMGRLPDSWIWLKILGMVYPILSIYLAWQFGIFFLSSWVYGRRVR- 180
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
K+ N V+LG G +RI ++ + + +
Sbjct: 181 ------KQRANYYVVLGAGLIQ-------GEHVGKLLGNRILAAVKAVRDNET-----IL 222
Query: 117 IISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+ SGG ++E+ +E G + LE QS T++N FSS +I+
Sbjct: 223 VFSGGQGPDEKVSEARAMQRYAVEVLGFPIERTMLEDQSRTTYENLFFSSQLIRE----K 278
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +S YH+ R+ L+ + + +A +Y ++E+I +L
Sbjct: 279 FLFFTSDYHVFRAALFAAMLKLEAQG----------GKGGKTAMYYRVPAFIREFIAVLN 328
Query: 236 A 236
Sbjct: 329 Y 329
>gi|254804041|ref|YP_003082262.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
alpha14]
gi|254667583|emb|CBA03327.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
alpha14]
Length = 218
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKHP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + I+ +GG +K + E+ V L+ GV +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSATP 179
>gi|229156674|ref|ZP_04284762.1| hypothetical protein bcere0010_28590 [Bacillus cereus ATCC 4342]
gi|228626843|gb|EEK83582.1| hypothetical protein bcere0010_28590 [Bacillus cereus ATCC 4342]
Length = 219
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 15 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYR---FKTDDSVKTDAGIVLGA-- 64
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 65 ------ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKEVGVENGIRTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSD 205
I AS +
Sbjct: 175 IEAYASPTP 183
>gi|331082614|ref|ZP_08331737.1| hypothetical protein HMPREF0992_00661 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330400233|gb|EGG79875.1| hypothetical protein HMPREF0992_00661 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 250
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 27/183 (14%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
++ + IV+LG PS RI + + + + ++SGG
Sbjct: 89 RNLDYIVVLGA--------QVNGKIPSKSLQYRIDRA----EKYLRENENTKAVLSGGKG 136
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-----IIL 178
+ G++E+ +L+ GV + LE +S +T QN F+ +I+ KN I +
Sbjct: 137 EDEGISEAQCMAEELVRKGVASKRLLLEAKSRNTEQNIAFTIPIIQQDSKKNLKELKIGI 196
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V++ +H+ RS Q Y I ++ F L+E+ G++
Sbjct: 197 VTNGFHIYRSSRIAQK----------KMQCKVYGIAAKNSRFLQVNYLLREFFGVIKDRL 246
Query: 239 RGN 241
GN
Sbjct: 247 VGN 249
>gi|170016501|ref|YP_001727420.1| hypothetical protein LCK_00143 [Leuconostoc citreum KM20]
gi|169803358|gb|ACA81976.1| Uncharacterized conserved protein [Leuconostoc citreum KM20]
Length = 188
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 25/167 (14%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G I I +RI + K S++ II SGG + +
Sbjct: 22 IVVLGGGLVDGYKIGKIVD-------ARIRAAVT---DAKLMSIYPIIIFSGGQGEDELV 71
Query: 129 AESIVYNNKL-LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+E+ + L V +LE +S +T+QN ++S+ ++KN + +S YH+ R
Sbjct: 72 SEAKAMRDWAILTYQVPISKTRLEDKSRNTYQNIKYSNQLLKN---QAFTFYTSDYHVFR 128
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ L Q + + D + Y L+E+ G++
Sbjct: 129 AVLLAQKQNVQAQGRGGDVVWR-----------YRMTAFLREFAGVM 164
>gi|325135386|gb|EGC58007.1| periplasmic protein [Neisseria meningitidis M0579]
gi|325201201|gb|ADY96655.1| conserved hypothetical protein [Neisseria meningitidis M01-240149]
gi|325207058|gb|ADZ02510.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
Length = 214
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKRP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + I+ +GG +K + E+ V L+ GV +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSATP 179
>gi|325197310|gb|ADY92766.1| conserved hypothetical protein [Neisseria meningitidis G2136]
Length = 218
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPLLLVFTSSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKRP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + I+ +GG +K + E+ V L+ GV +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSATP 179
>gi|296112949|ref|YP_003626887.1| hypothetical protein MCR_0726 [Moraxella catarrhalis RH4]
gi|295920643|gb|ADG60994.1| conserved hypothetical protein [Moraxella catarrhalis RH4]
Length = 235
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/222 (23%), Positives = 89/222 (40%), Gaps = 22/222 (9%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
++ +S++ I +L+ I L L Y L + D IV+LG
Sbjct: 1 MVLKSLKFIAVGGTVILIGIASALTPIFANLGVGLLNLYSA-LTLATVQDDATSIVVLGG 59
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G T A I + + SR + L+K +II SG AES
Sbjct: 60 GLTKN---SAGTISLNHFTQSRANAAIHLHKLYP-----LSIITSG--------AESPWL 103
Query: 135 NNKLLESGVERDD--IKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVSSAYHLKRSQLY 191
+ L+E + R I E S++T +NA F++ ++ + + + LV+ YH+ R++
Sbjct: 104 RDYLIE-HIGRTKVVIINENASMNTCENAVFTAKLLSHHELSTTVYLVTDRYHMARARRQ 162
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
F GI+T + + L S N T + E + +
Sbjct: 163 FAKAGIHTIPAPAP-LAIRSSWQNPKDNLIHTRRTIYELVAL 203
>gi|329925094|ref|ZP_08280038.1| hypothetical protein HMPREF9412_6526 [Paenibacillus sp. HGF5]
gi|328940213|gb|EGG36545.1| hypothetical protein HMPREF9412_6526 [Paenibacillus sp. HGF5]
Length = 194
Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 72/175 (41%), Gaps = 30/175 (17%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
M + ++I W + ++L+ + +++LG
Sbjct: 7 IIAIAAMTVLTYICW--LHAVMLQP---------------GKADALIVLGY------VSK 43
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
RI P + R+ E +L++ II+SGG +E+ + L+E G+
Sbjct: 44 DGRIHPLLK--ERLDEAYKLFRQYGHKY----IIVSGGAVGSR-RSEAELMEKYLVEKGI 96
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ E +S +T QN FS +++ K+ +++++ +H++R++ GI
Sbjct: 97 PAKRVLKEDKSNNTVQNLIFSKQLMEQYHLKSFVIITNLFHVRRTKYIMHRLGIK 151
>gi|229097607|ref|ZP_04228566.1| hypothetical protein bcere0020_28490 [Bacillus cereus Rock3-29]
gi|229106282|ref|ZP_04236779.1| hypothetical protein bcere0019_52930 [Bacillus cereus Rock3-28]
gi|229116606|ref|ZP_04245993.1| hypothetical protein bcere0017_28920 [Bacillus cereus Rock1-3]
gi|228666916|gb|EEL22371.1| hypothetical protein bcere0017_28920 [Bacillus cereus Rock1-3]
gi|228677137|gb|EEL31517.1| hypothetical protein bcere0019_52930 [Bacillus cereus Rock3-28]
gi|228685877|gb|EEL39796.1| hypothetical protein bcere0020_28490 [Bacillus cereus Rock3-29]
Length = 219
Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 15 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYR---FKTDDDVKTDAGIVLGA-- 64
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 65 ------ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YALKQGVKEEDILIETKSLFTEENLKNAKEVGIENGIHSYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSD 205
I AS +
Sbjct: 175 IEAYASPTP 183
>gi|114765476|ref|ZP_01444586.1| hypothetical protein 1100011001321_R2601_10319 [Pelagibaca
bermudensis HTCC2601]
gi|114542186|gb|EAU45217.1| hypothetical protein R2601_10319 [Roseovarius sp. HTCC2601]
Length = 156
Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 68/171 (39%), Gaps = 20/171 (11%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG EPS R + L++S + + I+ G H +
Sbjct: 3 VVLGAAVW-------PGGEPSPTLRRRAKRAVALWQSGEVGA-----ILGCGGEGAHAPS 50
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E+ V E+GV + + E +S T +N +F+ +++ M ++++VS AYHL R+
Sbjct: 51 EAEVICRLAREAGVPEEALFREDRSTTTEENLRFALPVLEEMGAHDVVIVSEAYHLPRAL 110
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
L + G+ + + A L+E + + RG
Sbjct: 111 LVARRLGLRARGAAPGLGGARMG--------AQARAMLREIPAFVWYWLRG 153
>gi|229139714|ref|ZP_04268284.1| hypothetical protein bcere0013_28240 [Bacillus cereus BDRD-ST26]
gi|228643845|gb|EEL00107.1| hypothetical protein bcere0013_28240 [Bacillus cereus BDRD-ST26]
Length = 219
Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 15 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYR---FKTDDSVKTDAGIVLGA-- 64
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 65 ------ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSD 205
I AS +
Sbjct: 175 IEAYASPTP 183
>gi|221633222|ref|YP_002522447.1| ACR protein [Thermomicrobium roseum DSM 5159]
gi|221156511|gb|ACM05638.1| Uncharacterized ACR [Thermomicrobium roseum DSM 5159]
Length = 210
Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 85/223 (38%), Gaps = 25/223 (11%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
I +F++ F+ L + I + L + + + + I++LG
Sbjct: 13 IGARWFVAGFLGLTALTAGTTILVLGLAIAEHA------RSDERAPADAILVLGA----- 61
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P+ +R+ L++ TI++ GG + +E+ L
Sbjct: 62 ---AQYNGWPTRAFRARLDHAAALFRQ----GYAPTIVLVGGKTDRDLESEAEAGARYLR 114
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
E G+ + + + +T+Q+ + ++ + + +++VS +HL RS+L + FG
Sbjct: 115 EQGIPDNALIVVPVGRNTWQSIEAAAQPLHERGVQRLLVVSDGFHLFRSKLMARSFGFQV 174
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
S + + PL + +E + L A+ G R
Sbjct: 175 VGSPAPG-SPIRPGSPLERWY-----IAREAVATL-AFLLGRR 210
>gi|324327048|gb|ADY22308.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 210
Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 6 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYR---FKTDDSVKTDAGIVLGA-- 55
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 56 ------ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 106 YAMKQGVKEEDILIETKSLFTEENLKNAKEVGIENGIQTYTIVSDPLHMKRAMRIAKHIN 165
Query: 197 INTKASCSD 205
I AS +
Sbjct: 166 IEAYASPTP 174
>gi|326572756|gb|EGE22742.1| hypothetical protein E9S_00375 [Moraxella catarrhalis BC7]
Length = 252
Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 52/219 (23%), Positives = 86/219 (39%), Gaps = 22/219 (10%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+S++ I +L+ I L L Y L + D IV+LG G T
Sbjct: 21 KSLKFIAVGGTVILIGIASALTPIFANLGVGLLNLYSA-LTLATVQDDATSIVVLGGGLT 79
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
A I + + SR + L+K +II SG AES +
Sbjct: 80 KN---SAGTISLNHFTQSRANAAIHLHKLYP-----LSIITSG--------AESPWLRDY 123
Query: 138 LLESGVERDD--IKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVSSAYHLKRSQLYFQH 194
L E + R I E S++T +NA F++ ++ + + + LV+ YH+ R++ F
Sbjct: 124 LTE-HIGRTKVVIINENASMNTCENAVFTAKLLSHHELSTTVYLVTDRYHMARARRQFAK 182
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
GI+T + + L S N T + E + +
Sbjct: 183 AGIHTIPAPAP-LAIRSSWQNPKDNLIHTRRTIYELVAL 220
>gi|310642426|ref|YP_003947184.1| protein [Paenibacillus polymyxa SC2]
gi|309247376|gb|ADO56943.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2]
Length = 231
Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 23/187 (12%)
Query: 17 CQSIRKIFFMS----CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
KIF +S +++F +G+ + + PL Q ++L
Sbjct: 21 QSRNGKIFMVSKRFILGLMIFILVGFVWAGIRVWNMNTAASTNPLQHAQIG------IVL 74
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG-DPQKHGLAES 131
G EPS R+ E + LY++ +I+SGG D E+
Sbjct: 75 GA--------SMWGAEPSPGLKERLEEALWLYRNGTVQ----RLIVSGGLDQPDFPYTEA 122
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L++ GV I LE Q+ T++N +S ++K + ++++ +YH R+
Sbjct: 123 EGMQRYLVDRGVPVQHILLENQATSTYENLLYSQRIMKEYDWNSTVIITHSYHGPRAMEI 182
Query: 192 FQHFGIN 198
Q +
Sbjct: 183 AQFLNFD 189
>gi|228986175|ref|ZP_04146317.1| hypothetical protein bthur0001_28620 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228773556|gb|EEM21980.1| hypothetical protein bthur0001_28620 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 219
Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 15 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYR---FKTDDSVKTDAGIVLGA-- 64
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 65 ------ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSD 205
I AS +
Sbjct: 175 IEAYASPTP 183
>gi|59802238|ref|YP_208950.1| hypothetical protein NGO1925 [Neisseria gonorrhoeae FA 1090]
gi|161869022|ref|YP_001598188.1| periplasmic protein [Neisseria meningitidis 053442]
gi|194099817|ref|YP_002002952.1| Periplasmic protein [Neisseria gonorrhoeae NCCP11945]
gi|239999990|ref|ZP_04719914.1| Periplasmic protein [Neisseria gonorrhoeae 35/02]
gi|240013062|ref|ZP_04719975.1| Periplasmic protein [Neisseria gonorrhoeae DGI18]
gi|240017631|ref|ZP_04724171.1| Periplasmic protein [Neisseria gonorrhoeae FA6140]
gi|240081888|ref|ZP_04726431.1| Periplasmic protein [Neisseria gonorrhoeae FA19]
gi|240114167|ref|ZP_04728657.1| Periplasmic protein [Neisseria gonorrhoeae MS11]
gi|240116805|ref|ZP_04730867.1| Periplasmic protein [Neisseria gonorrhoeae PID18]
gi|240119033|ref|ZP_04733095.1| Periplasmic protein [Neisseria gonorrhoeae PID1]
gi|240122252|ref|ZP_04735214.1| Periplasmic protein [Neisseria gonorrhoeae PID24-1]
gi|240122429|ref|ZP_04735385.1| Periplasmic protein [Neisseria gonorrhoeae PID332]
gi|240126722|ref|ZP_04739608.1| Periplasmic protein [Neisseria gonorrhoeae SK-92-679]
gi|240127142|ref|ZP_04739803.1| Periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
gi|254493442|ref|ZP_05106613.1| periplasmic protein [Neisseria gonorrhoeae 1291]
gi|260441598|ref|ZP_05795414.1| Periplasmic protein [Neisseria gonorrhoeae DGI2]
gi|268595796|ref|ZP_06129963.1| periplasmic protein [Neisseria gonorrhoeae 35/02]
gi|268597985|ref|ZP_06132152.1| periplasmic protein [Neisseria gonorrhoeae FA19]
gi|268600240|ref|ZP_06134407.1| periplasmic protein [Neisseria gonorrhoeae MS11]
gi|268602480|ref|ZP_06136647.1| periplasmic protein [Neisseria gonorrhoeae PID18]
gi|268604748|ref|ZP_06138915.1| periplasmic protein [Neisseria gonorrhoeae PID1]
gi|268681017|ref|ZP_06147879.1| periplasmic protein [Neisseria gonorrhoeae PID332]
gi|268685301|ref|ZP_06152163.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
gi|268685499|ref|ZP_06152361.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
gi|291044968|ref|ZP_06570677.1| periplasmic protein [Neisseria gonorrhoeae DGI2]
gi|293398039|ref|ZP_06642245.1| periplasmic protein [Neisseria gonorrhoeae F62]
gi|296313265|ref|ZP_06863206.1| putative periplasmic protein [Neisseria polysaccharea ATCC 43768]
gi|59719133|gb|AAW90538.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|161594575|gb|ABX72235.1| periplasmic protein [Neisseria meningitidis 053442]
gi|193935107|gb|ACF30931.1| Periplasmic protein [Neisseria gonorrhoeae NCCP11945]
gi|226512482|gb|EEH61827.1| periplasmic protein [Neisseria gonorrhoeae 1291]
gi|268549185|gb|EEZ44603.1| periplasmic protein [Neisseria gonorrhoeae 35/02]
gi|268551773|gb|EEZ46792.1| periplasmic protein [Neisseria gonorrhoeae FA19]
gi|268584371|gb|EEZ49047.1| periplasmic protein [Neisseria gonorrhoeae MS11]
gi|268586611|gb|EEZ51287.1| periplasmic protein [Neisseria gonorrhoeae PID18]
gi|268588879|gb|EEZ53555.1| periplasmic protein [Neisseria gonorrhoeae PID1]
gi|268621301|gb|EEZ53701.1| periplasmic protein [Neisseria gonorrhoeae PID332]
gi|268625585|gb|EEZ57985.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
gi|268625783|gb|EEZ58183.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
gi|291011862|gb|EFE03858.1| periplasmic protein [Neisseria gonorrhoeae DGI2]
gi|291611985|gb|EFF41054.1| periplasmic protein [Neisseria gonorrhoeae F62]
gi|296840237|gb|EFH24175.1| putative periplasmic protein [Neisseria polysaccharea ATCC 43768]
gi|317165286|gb|ADV08827.1| hypothetical protein NGTW08_1872 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 218
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKRP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + I+ +GG +K + E+ V L+ GV +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSATP 179
>gi|297566663|ref|YP_003685635.1| hypothetical protein Mesil_2261 [Meiothermus silvanus DSM 9946]
gi|296851112|gb|ADH64127.1| protein of unknown function DUF218 [Meiothermus silvanus DSM 9946]
Length = 181
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 63/178 (35%), Gaps = 29/178 (16%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P + IV+LG PS R+ +RLY+ + II+
Sbjct: 26 DPVSGTAPSWIVVLGA--------AQYNGHPSPILKGRLETALRLYRQHRAPG----IIV 73
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+GG +E V L GV ++ ET+S T+QN + +N+I+
Sbjct: 74 TGGKQPGDRYSEGEVGCRYLKAQGVPPTALRCETESHSTWQNLNNIKDTV---GKQNVIV 130
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE-YIGILI 235
V+ HL R+ + GI + + + +E +GIL
Sbjct: 131 VTDEPHLPRALYLAESLGIKAQGYPV-------------RGTFSSSYYWRESVLGILA 175
>gi|304388801|ref|ZP_07370857.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
gi|304337253|gb|EFM03431.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
Length = 218
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKRP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + I+ +GG +K + E+ V L+ GV +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSATP 179
>gi|323524387|ref|YP_004226540.1| hypothetical protein BC1001_0013 [Burkholderia sp. CCGE1001]
gi|323381389|gb|ADX53480.1| protein of unknown function DUF218 [Burkholderia sp. CCGE1001]
Length = 186
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 83/206 (40%), Gaps = 26/206 (12%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+L S + W + L L + L PQ +I ++ GN ++
Sbjct: 1 MLISILKW-VAAVWLTTSLIVASIGLLFKPQKS---DIAIVFGN-----------QVHAD 45
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
SR+ + + C + + I +SGG K G E+ + L++ G+ ++ I +
Sbjct: 46 GSPSSRLSARLDRARQCYDNGLCHQIFVSGG-IDKQGTDEARAMEDYLVKRGIPKERIVM 104
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
+ LDT+ + +S+ ++ K+ ++V+ +H+ R+ L + FGIN A
Sbjct: 105 DNMGLDTWDTVRNASAYMQTHHLKSALVVTQYFHVPRAALALRRFGINHVAGSYPQFFEI 164
Query: 211 YSIIPLSANFYLTELALKEYIGILIA 236
I A++E I+
Sbjct: 165 RDIYS----------AIRETPAIIWY 180
>gi|225869812|ref|YP_002745759.1| membrane protein [Streptococcus equi subsp. equi 4047]
gi|225699216|emb|CAW92492.1| putative membrane protein [Streptococcus equi subsp. equi 4047]
Length = 327
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 49/257 (19%), Positives = 95/257 (36%), Gaps = 48/257 (18%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFS--FIGWGIIPTI----LLKHLQFSYQ 54
+LL F + S R + + +LLF FI ++ +I LL+ + +
Sbjct: 65 LLLFLSFNGIRLIKREGLSFRNLLLIGSAVLLFVHPFISRLLLESIGDSKLLRIMYETSD 124
Query: 55 RPLLSPQWKKDG-----------------NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+L + I++LG+G P + SRI
Sbjct: 125 LLILYLLLIVSVYTISSMLNTFYFRKTKEDYIIVLGSGLNGDQVTPLL--------ASRI 176
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ +++Y+ + +I+SGG +AE ++ G++ +DI +E QS +T
Sbjct: 177 NKGIQIYQ----KNPGSKLIMSGGKGADELIAEGEAMCRYAIQQGIKSEDILVENQSRNT 232
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
+N S +I + G + LV++ YHL R + +
Sbjct: 233 RENILLSKQLIPS--GASFCLVTNRYHLFR-----------ALLLAKELALPCRCYGAKT 279
Query: 218 ANFYLTELALKEYIGIL 234
++ ++E +G L
Sbjct: 280 KLYFSMNAFIREIVGYL 296
>gi|217960516|ref|YP_002339078.1| hypothetical protein BCAH187_A3129 [Bacillus cereus AH187]
gi|217066516|gb|ACJ80766.1| conserved hypothetical protein [Bacillus cereus AH187]
Length = 210
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 6 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYR---FKTDDSVKTDAGIVLGA-- 55
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 56 ------ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 106 YAMKQGVKEEDILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKHIN 165
Query: 197 INTKASCSD 205
I AS +
Sbjct: 166 IEAYASPTP 174
>gi|325917198|ref|ZP_08179425.1| hypothetical protein XVE_3418 [Xanthomonas vesicatoria ATCC 35937]
gi|325536588|gb|EGD08357.1| hypothetical protein XVE_3418 [Xanthomonas vesicatoria ATCC 35937]
Length = 183
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 64/196 (32%), Gaps = 22/196 (11%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
+ I + ++ + ++I++LG A PS
Sbjct: 2 LALIWLVAVAAWIVW---------VGDRDQAAPADVIIVLGA--------AAYDARPSPV 44
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
RI + LY ++ +GG AES V L GV + I +ET
Sbjct: 45 FEERIRHALDLY----GQGYAPRLLFTGGFGNGARFAESQVARRYALRHGVPPEAIVIET 100
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
S T QN + ++++ I+VS H+ R+ Q G++ AS + + S
Sbjct: 101 SSRTTRQNLLQARALMERHGMHRAIIVSDPLHMARALRLCQELGVDALASSTP-STRFRS 159
Query: 213 IIPLSANFYLTELALK 228
Sbjct: 160 FHTSWRFLLQEVYFFH 175
>gi|325143566|gb|EGC65887.1| hypothetical protein NMBM01240013_2108 [Neisseria meningitidis
M01-240013]
gi|325205110|gb|ADZ00563.1| conserved hypothetical protein [Neisseria meningitidis M04-240196]
Length = 218
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L + P +L+ + Y+ + ++LG A P
Sbjct: 16 LLGGFCLSVFPFLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA--------AAWDKRP 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S RI + LY+S + I+ +GG +K + E+ V L+ GV +I
Sbjct: 68 SPVFRERINHAIALYQSRRVG----KIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNIL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S +T++N +++ ++++VS YHL R+ + G+ S +
Sbjct: 124 FENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSATP 179
>gi|261410038|ref|YP_003246279.1| hypothetical protein GYMC10_6269 [Paenibacillus sp. Y412MC10]
gi|261286501|gb|ACX68472.1| protein of unknown function DUF218 [Paenibacillus sp. Y412MC10]
Length = 194
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 72/175 (41%), Gaps = 30/175 (17%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
M + ++I W + ++L+ + +++LG
Sbjct: 7 IIAIAAMTVLTYICW--LHAVMLQP---------------GKADALIVLGY------VSK 43
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
RI P + R+ E + ++ II+SGG +E+ + L+E G+
Sbjct: 44 DGRIHPLLK--ERLDEACKQFRQYGHEY----IIVSGGAVGSR-RSEAELMKKYLVEKGI 96
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ E +S +T QN FS +++ Q K+ +++++ +H++R++ GI
Sbjct: 97 PAKRVLKEDKSNNTVQNLIFSKQLMEQYQLKSFVIITNLFHVRRTKYIMHRLGIK 151
>gi|312135433|ref|YP_004002771.1| hypothetical protein Calow_1424 [Caldicellulosiruptor owensensis
OL]
gi|311775484|gb|ADQ04971.1| protein of unknown function DUF218 [Caldicellulosiruptor owensensis
OL]
Length = 210
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 12/137 (8%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K + I++LG PS R+ + LYK II+ G
Sbjct: 50 PKKSDCIIVLGCAVYGN--------FPSPFFRERLNKAFELYKKGYARY----IIVCGAK 97
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ E+ L+ GV + + E +S T++N + ++ K+ I+VS+
Sbjct: 98 GPGENIFEAEAGKRYLIGKGVLPEFVLKEDKSFSTYENLLHAKRIMNEKGFKSAIIVSNI 157
Query: 183 YHLKRSQLYFQHFGINT 199
+HL+R+ L + IN
Sbjct: 158 FHLERACLIARKLKINA 174
>gi|325922970|ref|ZP_08184680.1| hypothetical protein XGA_3712 [Xanthomonas gardneri ATCC 19865]
gi|325546551|gb|EGD17695.1| hypothetical protein XGA_3712 [Xanthomonas gardneri ATCC 19865]
Length = 205
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 18/168 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++I++LG A PS RI + LY ++ +G
Sbjct: 43 DQAAPADVIIVLGA--------AAYDARPSPVFEERIRHALDLYAQ----GYAPRLLFTG 90
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G AES V L G+ + I +ET+S T QN Q + ++++ I+VS
Sbjct: 91 GFGNGARFAESQVARRYALRHGIPPEAIVIETESRTTRQNLQQARALMERHGMHRAIIVS 150
Query: 181 SAYHLKRSQLYFQHFGINTKASCS------DYLNAYYSIIPLSANFYL 222
H+ R+ Q G++ AS + + ++ ++ F+
Sbjct: 151 DPLHMARALRLSQELGVDALASSTPSTRFRSFHTSWRFLLQEVYYFHR 198
>gi|145223836|ref|YP_001134514.1| hypothetical protein Mflv_3249 [Mycobacterium gilvum PYR-GCK]
gi|145216322|gb|ABP45726.1| protein of unknown function DUF218 [Mycobacterium gilvum PYR-GCK]
Length = 202
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T+ ++R+ + + + II++GG+P+ +G
Sbjct: 53 AIVILGYGLKPDGTM-------RLILHTRVLAGLAVAQMF----PQAPIIVTGGNPR-NG 100
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L G R+ I LE ++ T QNA FS + + IILV+S+ H R
Sbjct: 101 NTEAEQMGKMLRLYGTPRERIILEERANSTVQNAAFSVPLAEQAGASGIILVTSSSHQDR 160
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ F G N A+ S N + I
Sbjct: 161 ADGIFADAGGNVLATVSFPDNNPSTNI 187
>gi|291529907|emb|CBK95492.1| Uncharacterized conserved protein [Eubacterium siraeum 70/3]
Length = 262
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/239 (14%), Positives = 81/239 (33%), Gaps = 30/239 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ + I + + ++++ G++ + F +P+
Sbjct: 52 VTVLLGIFTPKLFSNAKKAVRYIFRAVLIIY-----GVLAVYAITLSAFMIANMNDAPEK 106
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+IVL R PS R+ S I+SGG
Sbjct: 107 DGSRTVIVL---------GCQVRRDGPSLMLRRRLDAAC----SYLSADTKADCIVSGGK 153
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSS 181
++E+ L+ G+ + I E +S T++N FS ++++ I +V+
Sbjct: 154 GDNEHISEAEAMYEALVNDGISENRITKEDKSSSTYENLLFSKQILEDSGKPLRIAIVTD 213
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+H R++L + G + K + + + + ++E+ + + G
Sbjct: 214 GFHQWRARLQAESLGYDVKCVSA-----------ATPWYLVPVYWVREWFALSYLFVFG 261
>gi|52142423|ref|YP_084406.1| hypothetical protein BCZK2819 [Bacillus cereus E33L]
gi|206974549|ref|ZP_03235465.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|222096575|ref|YP_002530632.1| epih/gdmh-related protein [Bacillus cereus Q1]
gi|51975892|gb|AAU17442.1| conserved hypothetical protein [Bacillus cereus E33L]
gi|206747192|gb|EDZ58583.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|221240633|gb|ACM13343.1| EpiH/GdmH-related protein [Bacillus cereus Q1]
Length = 210
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 6 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYR---FKTDDSVKTDAGIVLGA-- 55
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 56 ------ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 106 YAMKQGVKEEDILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKHIN 165
Query: 197 INTKASCSD 205
I AS +
Sbjct: 166 IEAYASPTP 174
>gi|120403947|ref|YP_953776.1| hypothetical protein Mvan_2964 [Mycobacterium vanbaalenii PYR-1]
gi|119956765|gb|ABM13770.1| protein of unknown function DUF218 [Mycobacterium vanbaalenii
PYR-1]
Length = 233
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 12/137 (8%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T+ ++R+ M + Q II++GG+P+ +G
Sbjct: 84 AIVILGYGLKPDGTM-------RLILHTRVLAGMAVGHMFPQS----PIIVTGGNPR-NG 131
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ N L G+ + I +E ++ T QNA FS + K IILV+S+ H R
Sbjct: 132 KTEARQMRNMLRLYGIPDERIIVEDRANSTVQNAAFSVPLAKQAGTTGIILVTSSSHQDR 191
Query: 188 SQLYFQHFGINTKASCS 204
+ F G N A+ S
Sbjct: 192 ADGNFADAGGNVLATVS 208
>gi|312127289|ref|YP_003992163.1| hypothetical protein Calhy_1067 [Caldicellulosiruptor
hydrothermalis 108]
gi|311777308|gb|ADQ06794.1| protein of unknown function DUF218 [Caldicellulosiruptor
hydrothermalis 108]
Length = 195
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 12/136 (8%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K + I++LG PS R+ LYK II+ G
Sbjct: 35 PKKSDCIIVLGCAVYGD--------FPSPFFRERLNRAFELYKKGYARY----IIVCGAK 82
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ L+ESGV + + E +S T++N + ++ K+ I+VS+
Sbjct: 83 GPGENISEAEAGKRYLVESGVLPEFVLKEDKSFSTYENLLHAKRIMNKKGFKSAIIVSNM 142
Query: 183 YHLKRSQLYFQHFGIN 198
+HL+R+ L + IN
Sbjct: 143 FHLERAHLIAKKLKIN 158
>gi|294627587|ref|ZP_06706170.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294667213|ref|ZP_06732434.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292598218|gb|EFF42372.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292602994|gb|EFF46424.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 183
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 64/168 (38%), Gaps = 18/168 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++I++LG A PS RI + LY ++ +G
Sbjct: 21 DQAAPADVIIVLGA--------AAYDARPSPVFEERIRHALDLYAQ----GYAPRLLFTG 68
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G AES V L G+ D I +ET S T QN + + ++++ I+VS
Sbjct: 69 GFGNGARFAESQVARRYALRHGIPPDAIVIETTSRTTRQNLEQARTLMERHGLHRAIIVS 128
Query: 181 SAYHLKRSQLYFQHFGINTKASCS------DYLNAYYSIIPLSANFYL 222
H+ R+ Q GI+ AS + + ++ ++ F+
Sbjct: 129 DPLHMARALRLSQELGIDALASSTPSTRFRSFHTSWRFLLQEVYYFHR 176
>gi|166031681|ref|ZP_02234510.1| hypothetical protein DORFOR_01381 [Dorea formicigenerans ATCC
27755]
gi|166028658|gb|EDR47415.1| hypothetical protein DORFOR_01381 [Dorea formicigenerans ATCC
27755]
Length = 263
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 79/248 (31%), Gaps = 39/248 (15%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+ + +I + + L + I ++ + +I L+ +
Sbjct: 39 LAVFFICVALGIHFNLWKMFPDILKKGIVIIFAGCLASFLIIEGLIIS--------QMHV 90
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +++LG P ++ R+ + + I++G
Sbjct: 91 AGPDNLDYLIVLGAQVYKNGPSPVLKF--------RLDKAYE----YLSANPETRCIVTG 138
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--- 177
G E+ + L++ G++ I LE +S T QN S +I + +
Sbjct: 139 GQGSNEPFTEASCMADYLVKRGIDSGRIILEDKSTTTAQNLTNSMKLISADTINHALDSN 198
Query: 178 ------LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
++++ +H+ R+ + I Y I S YL +EY
Sbjct: 199 TTNTVGILTNDFHMFRAMQIARAQKIPNT----------YGISCGSTKVYLPNNMFREYF 248
Query: 232 GILIAYYR 239
+ +
Sbjct: 249 AEIKFLLK 256
>gi|329930832|ref|ZP_08284231.1| hypothetical protein HMPREF9412_4101 [Paenibacillus sp. HGF5]
gi|328934534|gb|EGG31039.1| hypothetical protein HMPREF9412_4101 [Paenibacillus sp. HGF5]
Length = 217
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 74/183 (40%), Gaps = 22/183 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
++ + + L+ + W ++ + RP ++ ++ ++LG
Sbjct: 16 KRAWYRRGIYTLLSLVVLGVFWSGYAYW---KIESAVSRPA------ENADVGIILGASM 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG-DPQKHGLAESIVYN 135
P +R R+ + Y + + T I++GG D ++ E+
Sbjct: 67 WGDQPSPGLR--------ERLEHALVEYNAGRFD----TFIVTGGLDKPEYNYTEAEGMR 114
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
N L+E+GV + I LE ++ T++N +S ++++ I+V+ YH R+
Sbjct: 115 NFLVEAGVPEERIFLENEATSTYENLLYSQAIMEEHGWNTAIIVTHDYHGTRAMEVATAL 174
Query: 196 GIN 198
G +
Sbjct: 175 GYD 177
>gi|47564233|ref|ZP_00235278.1| EpiH/GdmH-related protein [Bacillus cereus G9241]
gi|47558385|gb|EAL16708.1| EpiH/GdmH-related protein [Bacillus cereus G9241]
Length = 210
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 15/178 (8%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
F + I I+ + +SY+ + ++LG +
Sbjct: 12 VFQVFLLMICSAILYVSYAAYDIWSYR---FKTDDSVKTDAGIVLGA--------ASWNG 60
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L E+ ++ GV+ +D
Sbjct: 61 KPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARVYAMKQGVKEED 116
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I +ET+SL T +N + + + + +VS H+KR+ +H I AS +
Sbjct: 117 ILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKHINIEAYASPTP 174
>gi|254523274|ref|ZP_05135329.1| periplasmic protein [Stenotrophomonas sp. SKA14]
gi|219720865|gb|EED39390.1| periplasmic protein [Stenotrophomonas sp. SKA14]
Length = 210
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 69/211 (32%), Gaps = 30/211 (14%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+ ++F + LL + + I++LG
Sbjct: 15 WLWRLFVVLVIWLLGVTAWIVWVGER----------------DQAAKADAIIVLGA---- 54
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG-DPQKHGLAESIVYNNK 137
A +PS RI + LY++ +I +GG +ES V
Sbjct: 55 ----AAYDAKPSPVFEERIRHGLDLYEAQ----YAPLLIFTGGYGGSGARFSESQVARRY 106
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ GV D I +ET S +T QN + ++ +I+VS H+ R+ + GI
Sbjct: 107 ALKHGVPDDAILIETASRNTVQNLIEAKRLMDQRNLHRVIIVSDPLHMARALRLSKALGI 166
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALK 228
+ AS + + S
Sbjct: 167 DALASSTP-STRFRSFHTSWRFLVQEIYFFH 196
>gi|116619012|ref|YP_819383.1| hypothetical protein LEUM_1939 [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116097859|gb|ABJ63010.1| hypothetical protein LEUM_1939 [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 335
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 91/239 (38%), Gaps = 40/239 (16%)
Query: 1 MLLSWIFLIVSYWHL---LCQSIRKIFFMSCFMLLFSFIGWG-IIPTILLKHLQFSYQRP 56
+LL + + W L S++ I + ++ L+ + I + +L L +RP
Sbjct: 105 VLLVYAIADIGIWLLNDGFSISLKPILVVIPWLSLYVLWQFLQFISSSILYGLVV--KRP 162
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ P IV+LG G +RI + K + S + TI
Sbjct: 163 IHGP--------IVVLGGGLVD-------GQYVGRIVGNRIQAAV---KDATKMSEYPTI 204
Query: 117 IISGGDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I SGG + ++E+ + + V + LE S +T++N + S+ + +
Sbjct: 205 IFSGGQGKDELVSEAEAMRDFAVKRLNVPCEKTILEEHSRNTYENLRNSAKL----TNSS 260
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+S YH+ R L + G+N + Y Y I L+E+ G++
Sbjct: 261 FTFYTSEYHVFRGVLLAKKQGVNAQGRG-GYTQFPYRGI----------AFLREFAGVM 308
>gi|160878990|ref|YP_001557958.1| hypothetical protein Cphy_0832 [Clostridium phytofermentans ISDg]
gi|160427656|gb|ABX41219.1| protein of unknown function DUF218 [Clostridium phytofermentans
ISDg]
Length = 251
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/260 (16%), Positives = 94/260 (36%), Gaps = 50/260 (19%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKH------------- 48
+LS ++ + ++ ++ F+++ + LFS + T L+K+
Sbjct: 13 VLSILYFFIVLFYSGPKTSFLWFWIALALSLFSA---SFVLTYLMKYPSTFHNSLRLVIQ 69
Query: 49 -----------LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
L + + + +++LG PS +RI
Sbjct: 70 YSVWIGLSIFLLAEGFLVAKSLQTPVPNADYVIILGA--------QVRGRTPSLTLNARI 121
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ + I SGG + E+ L+ GV+ + I LE S +T
Sbjct: 122 NTAA----DYLLKNPNTKAICSGGQGDGEDVTEAYAIKRGLIARGVKEERILLEEHSTNT 177
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
+N FS S I + ++++V+S +H R+ G + L++ + + +
Sbjct: 178 VENLTFSQSFIDD-PNSSVVVVTSNFHTYRASRIAMKLGYKNLS-----LSSAHEFLFTT 231
Query: 218 ANFYLTELALKEYIGILIAY 237
+Y ++E+ ++ +
Sbjct: 232 PQYY-----VREFFALVKDW 246
>gi|78045951|ref|YP_362126.1| hypothetical protein XCV0395 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325929410|ref|ZP_08190538.1| hypothetical protein XPE_4644 [Xanthomonas perforans 91-118]
gi|78034381|emb|CAJ22026.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325540185|gb|EGD11799.1| hypothetical protein XPE_4644 [Xanthomonas perforans 91-118]
Length = 183
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 18/168 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++I++LG A PS RI + LY ++ +G
Sbjct: 21 DQAAPADVIIVLGA--------AAYDARPSPVFEERIRHALDLYAQ----GYAPRLLFTG 68
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G AES V L G+ + I +ET S T QN + + ++++ I+VS
Sbjct: 69 GFGNGARFAESQVARRYALRHGIPPEAIVIETTSRTTRQNLEQARTLMERHGLHRAIIVS 128
Query: 181 SAYHLKRSQLYFQHFGINTKASCS------DYLNAYYSIIPLSANFYL 222
H+ R+ Q GI+ AS + + ++ ++ F+
Sbjct: 129 DPLHMARALRLSQELGIDALASSTPSTRFRSFHTSWRFLLQEVYYFHR 176
>gi|291517930|emb|CBK73151.1| Uncharacterized conserved protein [Butyrivibrio fibrisolvens 16/4]
Length = 245
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 86/243 (35%), Gaps = 49/243 (20%)
Query: 5 WIFLIVSY-----------WHLLCQSIRKIFFMSCFMLLFSF-IGWGIIPTILLKHLQFS 52
WIF + + W + ++I+ F + L F I G I T +
Sbjct: 35 WIFAAIFWGFLYLMDKKSLWPKIPKAIKYAFRSIVAICLTIFVICQGCILTQFFSKGESG 94
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
I++LG PS +R+ + ++
Sbjct: 95 -------------AEYIIVLGA--------QMRDWGPSVVYKARLDSAVE----YLNNNP 129
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+I++GG ++E LL G+ +D I +E S+DT +N + S+I
Sbjct: 130 DTKVIVTGGQGANESISEGEGGQEYLLSQGINKDRILVEKDSVDTDENISNALSLIDTDN 189
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF-YLTELALKEYI 231
I +V++ +H+ R + + Y NA S I + YL ++E
Sbjct: 190 DMKICIVTNNFHVFRGVMIAKR-----------YTNAQISGIAAFTQYQYLPNNMVRETF 238
Query: 232 GIL 234
GIL
Sbjct: 239 GIL 241
>gi|260589199|ref|ZP_05855112.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
gi|260540280|gb|EEX20849.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
Length = 250
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 27/183 (14%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K+ + IV+LG PS RI + K K+ +++SGG
Sbjct: 89 KNLDYIVVLGA--------QVRGNVPSKSLQYRIDRAEKYLKENKKT----KVVLSGGKG 136
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-----NIIL 178
+ G++E+ +L G+ + + LE +S +T QN F+ +I+ K I +
Sbjct: 137 EDEGISEAQCMAEELGRKGIAFNRLLLEKKSRNTEQNITFTIPIIQQDSKKDLKELKIGI 196
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V++ +H+ R Q Y I ++ F L+E+ G++
Sbjct: 197 VTNGFHIYRGSGIAQK----------KMQCKVYGIAAKNSRFLQVNYLLREFFGVMKDRL 246
Query: 239 RGN 241
GN
Sbjct: 247 LGN 249
>gi|228940198|ref|ZP_04102769.1| hypothetical protein bthur0008_28470 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228973089|ref|ZP_04133681.1| hypothetical protein bthur0003_28520 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228979696|ref|ZP_04140020.1| hypothetical protein bthur0002_28700 [Bacillus thuringiensis Bt407]
gi|228780009|gb|EEM28252.1| hypothetical protein bthur0002_28700 [Bacillus thuringiensis Bt407]
gi|228786648|gb|EEM34635.1| hypothetical protein bthur0003_28520 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228819324|gb|EEM65378.1| hypothetical protein bthur0008_28470 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 219
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 15 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYRFKAND---DVKTDAGIVLGA-- 64
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LY++ II +GG + L E+
Sbjct: 65 ------ASWNGKPSPVFKERINHAISLYRNGNIK----KIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSD 205
I AS +
Sbjct: 175 IEAYASPTP 183
>gi|65320363|ref|ZP_00393322.1| COG1434: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
gi|228915677|ref|ZP_04079263.1| hypothetical protein bthur0012_28950 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228928153|ref|ZP_04091197.1| hypothetical protein bthur0010_28550 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228934353|ref|ZP_04097192.1| hypothetical protein bthur0009_28120 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228946697|ref|ZP_04109005.1| hypothetical protein bthur0007_28350 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229046787|ref|ZP_04192429.1| hypothetical protein bcere0027_28050 [Bacillus cereus AH676]
gi|229092098|ref|ZP_04223281.1| hypothetical protein bcere0021_28900 [Bacillus cereus Rock3-42]
gi|229110541|ref|ZP_04240111.1| hypothetical protein bcere0018_27940 [Bacillus cereus Rock1-15]
gi|229122649|ref|ZP_04251860.1| hypothetical protein bcere0016_29430 [Bacillus cereus 95/8201]
gi|229128413|ref|ZP_04257394.1| hypothetical protein bcere0015_28580 [Bacillus cereus BDRD-Cer4]
gi|229145685|ref|ZP_04274067.1| hypothetical protein bcere0012_28360 [Bacillus cereus BDRD-ST24]
gi|229151285|ref|ZP_04279491.1| hypothetical protein bcere0011_28320 [Bacillus cereus m1550]
gi|229185305|ref|ZP_04312489.1| hypothetical protein bcere0004_28590 [Bacillus cereus BGSC 6E1]
gi|228598225|gb|EEK55861.1| hypothetical protein bcere0004_28590 [Bacillus cereus BGSC 6E1]
gi|228632285|gb|EEK88908.1| hypothetical protein bcere0011_28320 [Bacillus cereus m1550]
gi|228637775|gb|EEK94223.1| hypothetical protein bcere0012_28360 [Bacillus cereus BDRD-ST24]
gi|228655272|gb|EEL11129.1| hypothetical protein bcere0015_28580 [Bacillus cereus BDRD-Cer4]
gi|228660901|gb|EEL16530.1| hypothetical protein bcere0016_29430 [Bacillus cereus 95/8201]
gi|228673025|gb|EEL28299.1| hypothetical protein bcere0018_27940 [Bacillus cereus Rock1-15]
gi|228691263|gb|EEL45026.1| hypothetical protein bcere0021_28900 [Bacillus cereus Rock3-42]
gi|228724550|gb|EEL75865.1| hypothetical protein bcere0027_28050 [Bacillus cereus AH676]
gi|228812994|gb|EEM59307.1| hypothetical protein bthur0007_28350 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228825521|gb|EEM71315.1| hypothetical protein bthur0009_28120 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228831570|gb|EEM77163.1| hypothetical protein bthur0010_28550 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228843963|gb|EEM89026.1| hypothetical protein bthur0012_28950 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 219
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 15 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYRFKAND---DVKTDAGIVLGA-- 64
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 65 ------ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSD 205
I AS +
Sbjct: 175 IEAYASPTP 183
>gi|291556404|emb|CBL33521.1| Uncharacterized conserved protein [Eubacterium siraeum V10Sc8a]
Length = 262
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/239 (14%), Positives = 81/239 (33%), Gaps = 30/239 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ + I + + ++++ G++ + F +P+
Sbjct: 52 VTVLLGIFTPKLFSNAKKAVRYIFRAVLIIY-----GVLAVYAITLSAFMIANMNDAPEK 106
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+IVL R PS R+ S I+SGG
Sbjct: 107 DGSRTVIVL---------GCQVRRDGPSLMLRRRLDAAC----SYLSTDTKADCIVSGGK 153
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSS 181
++E+ L+ G+ I E +S T++N FS ++++ + I +V+
Sbjct: 154 GDNEHISEAEAMYEALVNDGISESRITKEDKSSSTYENLLFSKQILEDSEKPLRIAIVTD 213
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+H R++L + G + K + + + + ++E+ + + G
Sbjct: 214 GFHQWRARLQAESLGYDVKCVSA-----------ATPWYLVPVYWVREWFALSYLFVFG 261
>gi|227431449|ref|ZP_03913498.1| integral membrane protein [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227352815|gb|EEJ42992.1| integral membrane protein [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 335
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 91/239 (38%), Gaps = 40/239 (16%)
Query: 1 MLLSWIFLIVSYWHL---LCQSIRKIFFMSCFMLLFSFIGWG-IIPTILLKHLQFSYQRP 56
+LL + + W L S++ I + ++ L+ F + I + +L L +RP
Sbjct: 105 VLLVYAIADIGIWLLNDGFSISLKPILVVIPWLSLYVFWQFLQFISSSILYGLVV--KRP 162
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ P IV+LG G +RI + K + S TI
Sbjct: 163 IHGP--------IVVLGGGLVD-------GQYVGRIVGNRIQAAV---KDATKMSESPTI 204
Query: 117 IISGGDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I SGG + ++E+ N + V + LE S +T++N + S+ + +
Sbjct: 205 IFSGGQGKDELVSEAEAMRNFAVKRLNVPCEKTILEEHSSNTYENLRNSAKL----TNSS 260
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+S YH+ R L + G+N + Y Y I L+E+ G++
Sbjct: 261 FTFYTSEYHVFRGVLLAKKQGVNAQGRG-GYTQFPYRGI----------AFLREFAGVM 308
>gi|188586776|ref|YP_001918321.1| protein of unknown function DUF218 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351463|gb|ACB85733.1| protein of unknown function DUF218 [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 194
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + ++LG +PS R+ + +Y ++ +I++GG +
Sbjct: 35 DADAAIVLGAAVWD--------GQPSPVFEERLNHAIWIY----ENEYVDKLILTGGKAE 82
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
AES V + +++ V++DDI +ET+S T +N +++ + + ++ I+VS H
Sbjct: 83 DTDRAESQVAKDYAIKNQVQKDDILIETKSSITEENFKYAQEIAAEHELESFIVVSDPLH 142
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
++R+ + G++ S + + Y + F + E+ YIG +I
Sbjct: 143 MRRAITIAETKGMDVYPSPTP--GSAYETLRSQVPFLIREVIF--YIGYII 189
>gi|190576261|ref|YP_001974106.1| hypothetical protein Smlt4469 [Stenotrophomonas maltophilia K279a]
gi|190014183|emb|CAQ47827.1| conserved hypothetical exported protein [Stenotrophomonas
maltophilia K279a]
Length = 210
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 70/214 (32%), Gaps = 30/214 (14%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L + ++F + LL + + I++LG
Sbjct: 12 LLGWLWRLFVLLVIWLLGVTAWIVWVGER----------------DQAAKADAIIVLGA- 54
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG-DPQKHGLAESIVY 134
A +PS RI + LY++ +I +GG +ES V
Sbjct: 55 -------AAYDAKPSPVFEERIRHGLDLYEA----RYAPLLIFTGGYGGTGARFSESQVA 103
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ GV D I +ET S +T QN + ++ +I+VS H+ R+ +
Sbjct: 104 RRYALKHGVPDDAILIETASRNTVQNLVEAKRLMDQRGLHRVIVVSDPLHMARALRLSKA 163
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
GI+ AS + + S
Sbjct: 164 LGIDALASSTP-STRFRSFHTSWRFLVQEIYFFH 196
>gi|167750336|ref|ZP_02422463.1| hypothetical protein EUBSIR_01310 [Eubacterium siraeum DSM 15702]
gi|167656696|gb|EDS00826.1| hypothetical protein EUBSIR_01310 [Eubacterium siraeum DSM 15702]
Length = 234
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/239 (14%), Positives = 80/239 (33%), Gaps = 30/239 (12%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ + I + + ++++ G++ + F +P+
Sbjct: 24 VTVLLGIFTPKLFSNAKKAVRYIFRAVLIIY-----GVLAVYAITLSAFMIANMNDAPEK 78
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+IVL R PS R+ S I+SGG
Sbjct: 79 DGSRTVIVL---------GCQVRRDGPSLMLRRRLDAAC----SYLSTDTKADCIVSGGK 125
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSS 181
++E+ L+ G+ I E +S T++N FS ++++ I +V+
Sbjct: 126 GDNEHISEAEAMYEALVNDGISESRISKEDKSSSTYENLLFSKQILEDSGKPLRIAIVTD 185
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+H R++L + G + K + + + + ++E+ + + G
Sbjct: 186 GFHQWRARLQAESLGYDVKCVSA-----------ATPWYLVPVYWVREWFALSYLFVFG 233
>gi|218295589|ref|ZP_03496385.1| protein of unknown function DUF218 [Thermus aquaticus Y51MC23]
gi|218243748|gb|EED10275.1| protein of unknown function DUF218 [Thermus aquaticus Y51MC23]
Length = 211
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 67/182 (36%), Gaps = 29/182 (15%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
LLSP + IV+LG PS R+ + LY+ + I
Sbjct: 13 LLSPVLAAEYAWIVVLGA--------AQYGGRPSPALERRLLAALALYQ----KGLAPRI 60
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++GG L+E L+ GV ++ + ET+S T+QN F ++ I
Sbjct: 61 AVAGGKAAGDTLSEGEAGCRYLMARGVPQEALLCETRSQSTYQNLLFLRPHLEG----RI 116
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+LV+ A HL R+ + G+ + Y + L+E + L
Sbjct: 117 LLVTDAPHLPRALFLARLLGLKAEGYPVPGR-------------YPPQYWLRESLYRLWL 163
Query: 237 YY 238
Y
Sbjct: 164 YL 165
>gi|229173740|ref|ZP_04301282.1| hypothetical protein bcere0006_28400 [Bacillus cereus MM3]
gi|228609839|gb|EEK67119.1| hypothetical protein bcere0006_28400 [Bacillus cereus MM3]
Length = 219
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 15 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYR---FKTNDGVKTDAGIVLGA-- 64
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 65 ------ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSD 205
I AS +
Sbjct: 175 IEAYASPTP 183
>gi|94313597|ref|YP_586806.1| hypothetical protein Rmet_4675 [Cupriavidus metallidurans CH34]
gi|93357449|gb|ABF11537.1| conserved hypothetical protein; putative membrane protein
[Cupriavidus metallidurans CH34]
Length = 270
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/229 (16%), Positives = 81/229 (35%), Gaps = 33/229 (14%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
Q + + + I W + + +H++ + IV+LG+G
Sbjct: 69 WRQWLWRAGWAG-------LIVWLVSVAMFFQHMRHGIADLAPNASAAGAPVAIVILGSG 121
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL-AESIVY 134
+ P + +R+ E + ++++SGG E+ +
Sbjct: 122 SPNCEVSPTL--------AARLDEGL----QQASRFPAASVVVSGGQDFGRLPCTEAGIM 169
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSSAYHLKRSQLY 191
+ LL G+ + + E +S T +N QFS ++ +++V+S +HL R++
Sbjct: 170 GDYLLAHGLVPERLIREDRSTSTAENMQFSREVLARHGVRATDPVLVVTSDFHLLRAERI 229
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ G T + + Y L+EY + + G
Sbjct: 230 ARKAGFTTLSGAAAATPLYIRY----------NAWLREYFAYISGWVLG 268
>gi|153855830|ref|ZP_01996816.1| hypothetical protein DORLON_02837 [Dorea longicatena DSM 13814]
gi|149751871|gb|EDM61802.1| hypothetical protein DORLON_02837 [Dorea longicatena DSM 13814]
Length = 255
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 79/233 (33%), Gaps = 28/233 (12%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
++ + + C I CF+L+ II + L + +
Sbjct: 48 ALIRLYGMPCIVEAMIGISVCFLLIAE---IKIIKGMHRNPLGKRKEHFEEDTKTGSATR 104
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I++LG +R S R + Y +I+SGG +
Sbjct: 105 WIIVLGA---------QVRGRKITDSLKRRLDCASEYLKEH---PEVHVIVSGGQGKDEE 152
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ L G++R I E S++T +N +FS ++I ++ + +VS+ +H+ R
Sbjct: 153 VTEAYAMARYLECEGLDRRRIVQEDVSVNTLENLKFSRNLIADVD-TPVGIVSNNFHVYR 211
Query: 188 SQLYFQHFGIN-TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+Y + G + ++E + + +
Sbjct: 212 GCVYAKRAGFKEPFPIPA-----------SCHPLLFPNYFVRECFAVWKLWLK 253
>gi|15893643|ref|NP_346992.1| hypothetical protein CA_C0352 [Clostridium acetobutylicum ATCC 824]
gi|15023198|gb|AAK78332.1|AE007549_12 Uncharacterized conserved membrane protein, SANA family
[Clostridium acetobutylicum ATCC 824]
gi|325507765|gb|ADZ19401.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
Length = 225
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 31/209 (14%)
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR-IEPSFQSYSRIFETMRLY 104
L L F Y+ P+ + + ++I++LG PA++ +PS R+ + ++L+
Sbjct: 30 LYPLLF-YKSPITKLR-RDSFDVIIILG--------FPALQNGKPSPIMRERVIKAVKLF 79
Query: 105 KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
+ II SGG + ES V N G+ + E +S +T+QN Q S
Sbjct: 80 NKGYAN----KIICSGGGVYNKYI-ESDVMANFAKSLGIPNGCLIKEDKSRNTYQNIQNS 134
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+++N + I+V+S +HL+RS + F I + SDY + + ++ +
Sbjct: 135 IKIMENKHWSSAIVVTSPWHLRRSNYFLSKFNIAYRMEKSDYPKEFSYLYIIAMYMWENY 194
Query: 225 LALK------------E-YIGIL--IAYY 238
+ K E Y+G L + YY
Sbjct: 195 VMTKTKMNLLLSFLLLEIYLGYLSYVYYY 223
>gi|332142015|ref|YP_004427753.1| hypothetical protein MADE_1013105 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327552037|gb|AEA98755.1| hypothetical protein MADE_1013105 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 229
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 94/232 (40%), Gaps = 15/232 (6%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIP-TILLKHLQFSYQRPLLSPQWKKDGNII 69
+ L+ ++ + ++C L++ I +LL L+ S + L + ++ + I
Sbjct: 3 AMAQLIIKNKKLASKLACASLIWILIWSQPYAVDLLLYPLERSQKVKRLQYKNQRTPDYI 62
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD-PQKHGL 128
+L +P I P S R+ +T+ LY+ K II++GG + +
Sbjct: 63 FVLACYYNTEGDLPNISRWPDC-SLQRLVQTVMLYEQTKS-----KIIVTGGRFLENQDI 116
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ S + L+ GV D I + DT S ++ N + +++V+SA H+ R
Sbjct: 117 SYSQKAKSFLISLGVPEDKIITTDKGTDTHGEISSISQLVTN---RKLLVVTSATHVLRV 173
Query: 189 QLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIA 236
+ + DY + Y +P + T A+ EY+ ++
Sbjct: 174 SNELDNVTASVAFFAVDYHSGGELTPYLRMPSLSALVATRAAIYEYLALVKQ 225
>gi|326317504|ref|YP_004235176.1| hypothetical protein Acav_2700 [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323374340|gb|ADX46609.1| protein of unknown function DUF218 [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 272
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/235 (16%), Positives = 75/235 (31%), Gaps = 26/235 (11%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFM-LLFSFIG-WGIIPTILLKHLQFSYQRPLLSPQ 61
+ + ++ W + R + + +G W + L+ P P
Sbjct: 54 AGLLVLALRWEQAARWRRGHRGRILAWRMAWCAVGLWLVSVAWFWSWLRDYGVPPAEVP- 112
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
IV+LG GT P + +R+ L + + + GG
Sbjct: 113 ---PVQAIVVLGAGTLDGQPRPTL--------AARLDTAAELAR----RQPQALVAVCGG 157
Query: 122 DPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQ---GKNII 177
+E+ + L E + I E +S T N S +++
Sbjct: 158 IDLGETESEAAIMARYLRERHGIAPGRIVQERESTSTELNIALSRPLLQARGVGAAAPTA 217
Query: 178 LVSSAYHLKRSQLYFQHFGIN---TKASCSDYLNAYYSIIPLSANFYLTELALKE 229
+V+S +HL R+ + G+ + + Y + + L+ AL+E
Sbjct: 218 IVTSDFHLMRATRIARRQGLAGVVPVGAPTPITTRYNAWL-REYFAMLSSWALRE 271
>gi|295835719|ref|ZP_06822652.1| membrane protein [Streptomyces sp. SPB74]
gi|295825649|gb|EDY45722.2| membrane protein [Streptomyces sp. SPB74]
Length = 335
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 83/223 (37%), Gaps = 26/223 (11%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ + + G+ + L + ++ + +V+LG G
Sbjct: 119 RALLVLAGTVTAIAGYFGFLFSCLLAYAFL-------YGHLRVRRRTDYVVVLGAGL--- 168
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ R+ P + R+ + ++ + +++SGG L E+ +L
Sbjct: 169 --LGGERVSPPLAA--RLDRGLAALRTLTRRGREPLLLLSGGKGGDETLPEAEAMARYVL 224
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
E G + E S T +N + S +++ K G ++V+S YH+ R+ + + G+
Sbjct: 225 EKGFPDRLLVREPDSATTGENLRNSHALMAKAKPGYRCVVVTSNYHVFRTAVTPRRAGVR 284
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ +A ++ ++E++ +L Y R N
Sbjct: 285 GHVIGAP-----------TATYFWPSATIREFVALLADYRRTN 316
>gi|295109560|emb|CBL23513.1| Uncharacterized conserved protein [Ruminococcus obeum A2-162]
Length = 160
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + D + I++LG A + E +R + + ++SG
Sbjct: 2 KTRSDLDYIIVLGAHVNGTKLTLA------------LLERVRRALLYLEENPDTKAVLSG 49
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++E+ L E G+ + + E QS +T +N FS +I +M+ +I +V+
Sbjct: 50 GRGDGEQISEAEAMYRYLTEHGIAAERLIREEQSTNTKENLDFSLRLIGSME-HSIGVVT 108
Query: 181 SAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +H+ R + G S Y ++ +I + +E + IL
Sbjct: 109 NNFHVFRGVAIGKKCGCRKIYPVPSKYR-SWRLLIYVP----------REILAILKDKIV 157
Query: 240 GN 241
GN
Sbjct: 158 GN 159
>gi|30021189|ref|NP_832820.1| EpiH/GdmH-related protein [Bacillus cereus ATCC 14579]
gi|30263055|ref|NP_845432.1| hypothetical protein BA_3106 [Bacillus anthracis str. Ames]
gi|47528398|ref|YP_019747.1| hypothetical protein GBAA_3106 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49185896|ref|YP_029148.1| hypothetical protein BAS2890 [Bacillus anthracis str. Sterne]
gi|49479533|ref|YP_037182.1| hypothetical protein BT9727_2858 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|165868915|ref|ZP_02213575.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167632539|ref|ZP_02390866.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167637429|ref|ZP_02395709.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170685113|ref|ZP_02876338.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170704915|ref|ZP_02895380.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177650000|ref|ZP_02933001.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190564854|ref|ZP_03017775.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|196032544|ref|ZP_03099958.1| conserved hypothetical protein [Bacillus cereus W]
gi|196038177|ref|ZP_03105487.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196042737|ref|ZP_03109976.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|218232485|ref|YP_002367802.1| hypothetical protein BCB4264_A3095 [Bacillus cereus B4264]
gi|218904226|ref|YP_002452060.1| hypothetical protein BCAH820_3110 [Bacillus cereus AH820]
gi|225865058|ref|YP_002750436.1| hypothetical protein BCA_3166 [Bacillus cereus 03BB102]
gi|227814096|ref|YP_002814105.1| hypothetical protein BAMEG_1503 [Bacillus anthracis str. CDC 684]
gi|229600823|ref|YP_002867325.1| hypothetical protein BAA_3156 [Bacillus anthracis str. A0248]
gi|254685645|ref|ZP_05149504.1| hypothetical protein BantC_17565 [Bacillus anthracis str.
CNEVA-9066]
gi|254723056|ref|ZP_05184844.1| hypothetical protein BantA1_11354 [Bacillus anthracis str. A1055]
gi|254738109|ref|ZP_05195812.1| hypothetical protein BantWNA_23369 [Bacillus anthracis str. Western
North America USA6153]
gi|254742718|ref|ZP_05200403.1| hypothetical protein BantKB_17177 [Bacillus anthracis str. Kruger
B]
gi|254752426|ref|ZP_05204462.1| hypothetical protein BantV_08161 [Bacillus anthracis str. Vollum]
gi|254760943|ref|ZP_05212967.1| hypothetical protein BantA9_21746 [Bacillus anthracis str.
Australia 94]
gi|296503616|ref|YP_003665316.1| EpiH/GdmH-related protein [Bacillus thuringiensis BMB171]
gi|300118019|ref|ZP_07055768.1| hypothetical protein BCSJ1_08918 [Bacillus cereus SJ1]
gi|301054601|ref|YP_003792812.1| hypothetical protein BACI_c30540 [Bacillus anthracis CI]
gi|29896743|gb|AAP10021.1| EpiH/GdmH-related protein [Bacillus cereus ATCC 14579]
gi|30257688|gb|AAP26918.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47503546|gb|AAT32222.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49179823|gb|AAT55199.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|49331089|gb|AAT61735.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|164715641|gb|EDR21158.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167514936|gb|EDR90302.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167532837|gb|EDR95473.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170129770|gb|EDS98632.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170671373|gb|EDT22111.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172083952|gb|EDT69011.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190564171|gb|EDV18135.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|195995295|gb|EDX59249.1| conserved hypothetical protein [Bacillus cereus W]
gi|196026221|gb|EDX64889.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|196031447|gb|EDX70044.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|218160442|gb|ACK60434.1| conserved hypothetical protein [Bacillus cereus B4264]
gi|218536393|gb|ACK88791.1| conserved hypothetical protein [Bacillus cereus AH820]
gi|225786516|gb|ACO26733.1| conserved hypothetical protein [Bacillus cereus 03BB102]
gi|227003379|gb|ACP13122.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|229265231|gb|ACQ46868.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
gi|296324668|gb|ADH07596.1| EpiH/GdmH-related protein [Bacillus thuringiensis BMB171]
gi|298724604|gb|EFI65297.1| hypothetical protein BCSJ1_08918 [Bacillus cereus SJ1]
gi|300376770|gb|ADK05674.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
Length = 210
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 6 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYRFKAND---DVKTDAGIVLGA-- 55
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 56 ------ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 106 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKHIN 165
Query: 197 INTKASCSD 205
I AS +
Sbjct: 166 IEAYASPTP 174
>gi|291541508|emb|CBL14618.1| Uncharacterized conserved protein [Ruminococcus bromii L2-63]
Length = 256
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 88/238 (36%), Gaps = 37/238 (15%)
Query: 1 MLLSWIFLIVSYWHLLCQS--IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+L I + C KI F + +F +G I T +
Sbjct: 44 LLCVLIPPVHGAIKAFCFKHLFTKIVFRVVNIGFIAFAVYGAIVTSAMVW--------AT 95
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
++ IVL G + P PS RI KS S + ++
Sbjct: 96 CQAPPENSTAIVL---GAQVKP------WGPSVILRGRIDAA----KSYLDDSPNANAVL 142
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NII 177
SGG ++E+ N L ES ++ + +E +S +T +N + S +I++ +I
Sbjct: 143 SGGQGSDEVMSEAQCMYNVLTESKIDSSRLYMEDKSTNTTENIRNSMKIIEDNNLNTDIT 202
Query: 178 LVSSAYHLKRSQLYFQHFGI--NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+V+ +H R+++ GI N A SD + Y+ A++E+ +
Sbjct: 203 IVTDGFHQLRARIICSQLGIKGNVGAVSSD-----------TRLLYVPTYAVREWFAL 249
>gi|228921749|ref|ZP_04085066.1| hypothetical protein bthur0011_27460 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228953412|ref|ZP_04115458.1| hypothetical protein bthur0006_27920 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229070559|ref|ZP_04203799.1| hypothetical protein bcere0025_27430 [Bacillus cereus F65185]
gi|229080263|ref|ZP_04212790.1| hypothetical protein bcere0023_29110 [Bacillus cereus Rock4-2]
gi|229179370|ref|ZP_04306724.1| hypothetical protein bcere0005_27200 [Bacillus cereus 172560W]
gi|229191184|ref|ZP_04318173.1| hypothetical protein bcere0002_28480 [Bacillus cereus ATCC 10876]
gi|228592334|gb|EEK50164.1| hypothetical protein bcere0002_28480 [Bacillus cereus ATCC 10876]
gi|228604268|gb|EEK61735.1| hypothetical protein bcere0005_27200 [Bacillus cereus 172560W]
gi|228703158|gb|EEL55617.1| hypothetical protein bcere0023_29110 [Bacillus cereus Rock4-2]
gi|228712574|gb|EEL64509.1| hypothetical protein bcere0025_27430 [Bacillus cereus F65185]
gi|228806309|gb|EEM52882.1| hypothetical protein bthur0006_27920 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228837961|gb|EEM83285.1| hypothetical protein bthur0011_27460 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 219
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 15 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYRFKAND---DVKTDAGIVLGA-- 64
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 65 ------ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIRTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSD 205
I AS +
Sbjct: 175 IEAYASPTP 183
>gi|229197269|ref|ZP_04324000.1| hypothetical protein bcere0001_28180 [Bacillus cereus m1293]
gi|228586228|gb|EEK44315.1| hypothetical protein bcere0001_28180 [Bacillus cereus m1293]
Length = 219
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 15 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYRFKAND---DVKTDAGIVLGA-- 64
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 65 ------ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKDEDILIETKSLFTEENLKNAKEVGVENGIRTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSD 205
I AS +
Sbjct: 175 IEAYASPTP 183
>gi|154488709|ref|ZP_02029558.1| hypothetical protein BIFADO_02016 [Bifidobacterium adolescentis
L2-32]
gi|154082846|gb|EDN81891.1| hypothetical protein BIFADO_02016 [Bifidobacterium adolescentis
L2-32]
Length = 250
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/198 (15%), Positives = 72/198 (36%), Gaps = 19/198 (9%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
++++ +F +++ + + ++ IG I T+ +
Sbjct: 41 LVIAAVFALLAVGIAANWWVALPRIIRGVIIAVVCIGIAIFGTV------EGCIISNMHA 94
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + + +V+LG + PS R+ + +S I+SG
Sbjct: 95 RGDQHLDYVVVLGA--------QVRKSGPSKALRYRLDTAADYLR----NSPDTICIVSG 142
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ + L G+E I E++S T +N S +I ++ +++
Sbjct: 143 GKGANEPFPEAQGMADYLKAHGIEEGRILQESKSKTTQENIVNSKKLIAGDN-ASVGIIT 201
Query: 181 SAYHLKRSQLYFQHFGIN 198
+ +H+ R+ G++
Sbjct: 202 NDFHMFRALQIAHDNGLD 219
>gi|326940847|gb|AEA16743.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 210
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 6 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYRFKAND---DVKTDAGIVLGA-- 55
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LY++ II +GG + L E+
Sbjct: 56 ------ASWNGKPSPVFKERINHAISLYRNGNIK----KIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 106 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKHIN 165
Query: 197 INTKASCSD 205
I AS +
Sbjct: 166 IEAYASPTP 174
>gi|21241154|ref|NP_640736.1| hypothetical protein XAC0380 [Xanthomonas axonopodis pv. citri str.
306]
gi|21106459|gb|AAM35272.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 201
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 64/168 (38%), Gaps = 18/168 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++I++LG A PS RI + LY ++ +G
Sbjct: 39 DQAAPADVIIVLGA--------AAYDARPSPVFEERIRHALDLYAQ----GYAPRLLFTG 86
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G AES V L G+ D I +ET S T QN + + ++++ I+VS
Sbjct: 87 GFGNGARFAESQVARRYALRHGIPPDAIVIETTSRTTRQNLEQARTLMERHGLHRAIIVS 146
Query: 181 SAYHLKRSQLYFQHFGINTKASCS------DYLNAYYSIIPLSANFYL 222
H+ R+ Q GI+ AS + + ++ ++ F+
Sbjct: 147 DPLHMARALRLSQELGIDALASSTPSTRFRSFHTSWRFLLQEVYYFHR 194
>gi|75764443|ref|ZP_00743940.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228901618|ref|ZP_04065796.1| hypothetical protein bthur0014_28070 [Bacillus thuringiensis IBL
4222]
gi|228908852|ref|ZP_04072684.1| hypothetical protein bthur0013_30090 [Bacillus thuringiensis IBL
200]
gi|74488069|gb|EAO51788.1| EpiH/GdmH-related protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228850862|gb|EEM95684.1| hypothetical protein bthur0013_30090 [Bacillus thuringiensis IBL
200]
gi|228858030|gb|EEN02512.1| hypothetical protein bthur0014_28070 [Bacillus thuringiensis IBL
4222]
Length = 219
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 72/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 15 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYRFKAND---DVKTDAGIVLGA-- 64
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LY++ II +GG + L E+
Sbjct: 65 ------ASWNGKPSPVFKERINHAISLYRNGNIK----KIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIHTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSD 205
I AS +
Sbjct: 175 IEAYASPTP 183
>gi|315444167|ref|YP_004077046.1| hypothetical protein Mspyr1_25770 [Mycobacterium sp. Spyr1]
gi|315262470|gb|ADT99211.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length = 185
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T+ ++R+ + + + II++GG+P+ +G
Sbjct: 36 AIVILGYGLKPDGTM-------RLILHTRVLAGLAVAQMF----PQAPIIVTGGNPR-NG 83
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L G R+ I LE ++ T QNA FS + + IILV+S+ H R
Sbjct: 84 NTEAEQMGKMLRLYGTPRERIILEERANSTVQNAAFSVPLAEQAGASGIILVTSSSHQDR 143
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSII 214
+ F G N A+ S N + I
Sbjct: 144 ADGIFADAGGNVLATVSFPDNNPSTNI 170
>gi|118478405|ref|YP_895556.1| hypothetical protein BALH_2770 [Bacillus thuringiensis str. Al
Hakam]
gi|118417630|gb|ABK86049.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 225
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 21 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYRFKAND---DVKTDAGIVLGA-- 70
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 71 ------ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARV 120
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 121 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKHIN 180
Query: 197 INTKASCSD 205
I AS +
Sbjct: 181 IEAYASPTP 189
>gi|1771201|emb|CAA68042.1| ORF [Lactococcus lactis]
Length = 283
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 86/240 (35%), Gaps = 36/240 (15%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ W++L + L I + +L ++ W + L + R
Sbjct: 52 LLIDWVYLSMG--RLPDSWIWLKILGIVYPVLSIYLAWQFGISFLSSWVYGRRVR----- 104
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K+ V+LG G +RI ++ + + ++ SG
Sbjct: 105 --KQRAAYHVVLGAGLIQ-------GEHVGKLLGNRILAAVKAVRDNET-----ILVFSG 150
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G ++E+ +E G + LE QS T++N FSS +IK +
Sbjct: 151 GQGPDEKISEARAMQKYAVEVLGFPIERTMLEDQSRTTYENLVFSSRLIKE----KFMFF 206
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+S YH+ R+ L+ I+ + +A +Y ++E+I ++ R
Sbjct: 207 TSDYHVFRAALFAATLKIDAQG----------GKGGKTAMYYRVPAFIREFIAVMNYEKR 256
>gi|289664371|ref|ZP_06485952.1| hypothetical protein XcampvN_15203 [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289668148|ref|ZP_06489223.1| hypothetical protein XcampmN_06538 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 205
Score = 99 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 18/168 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++I++LG A PS RI + LY ++ +G
Sbjct: 43 DQAAPADVIIVLGA--------AAYDARPSPVFEERIRHALDLYAQ----GYAPRLLFTG 90
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G AES V L G+ + I +ET S T QN + + ++++ I+VS
Sbjct: 91 GFGNGARFAESQVARRYALRHGIPPEAIVIETTSRTTRQNLEQARTLMERHGMHRAIIVS 150
Query: 181 SAYHLKRSQLYFQHFGINTKASCS------DYLNAYYSIIPLSANFYL 222
H+ R+ Q GI+ AS + + ++ ++ F+
Sbjct: 151 DPLHMARALRLSQELGIDALASSTPSTRFRSFHTSWRFLLQEVYYFHR 198
>gi|194367604|ref|YP_002030214.1| hypothetical protein Smal_3832 [Stenotrophomonas maltophilia
R551-3]
gi|194350408|gb|ACF53531.1| protein of unknown function DUF218 [Stenotrophomonas maltophilia
R551-3]
Length = 210
Score = 99 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 71/214 (33%), Gaps = 30/214 (14%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L + ++F + LL + + I++LG
Sbjct: 12 LLGWLWRLFVLLVIWLLGVTAWIVWVGER----------------DQAAKADAIIVLGA- 54
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG-DPQKHGLAESIVY 134
A +PS RI + LY++ +I +GG +ES V
Sbjct: 55 -------AAYDAKPSPVFEERIRHGLDLYEA----RYAPLLIFTGGYGGTGARFSESQVA 103
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ G+ D I +ET S +T QN + +++ +I+VS H+ R+ +
Sbjct: 104 RRYALKHGIPDDAILIETASRNTVQNLVEAKRLMEQRDLHRVIIVSDPLHMARALRLSKA 163
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
GI+ AS + + S
Sbjct: 164 LGIDALASSTP-STRFRSFHTSWRFLVQEIYFFH 196
>gi|206969158|ref|ZP_03230113.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|206736199|gb|EDZ53357.1| conserved hypothetical protein [Bacillus cereus AH1134]
Length = 210
Score = 99 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 6 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYRFKAND---DVKTDAGIVLGA-- 55
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 56 ------ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 106 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIRTYTIVSDPLHMKRAMRIAKHIN 165
Query: 197 INTKASCSD 205
I AS +
Sbjct: 166 IEAYASPTP 174
>gi|218898164|ref|YP_002446575.1| hypothetical protein BCG9842_B2141 [Bacillus cereus G9842]
gi|218541554|gb|ACK93948.1| conserved hypothetical protein [Bacillus cereus G9842]
Length = 210
Score = 99 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 72/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 6 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYRFKAND---DVKTDAGIVLGA-- 55
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LY++ II +GG + L E+
Sbjct: 56 ------ASWNGKPSPVFKERINHAISLYRNGNIK----KIIFTGGTKFEAELEEARTARV 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + +VS H+KR+ +H
Sbjct: 106 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIHTYTIVSDPLHMKRAMRIAKHIN 165
Query: 197 INTKASCSD 205
I AS +
Sbjct: 166 IEAYASPTP 174
>gi|229030771|ref|ZP_04186797.1| hypothetical protein bcere0028_28350 [Bacillus cereus AH1271]
gi|228730533|gb|EEL81487.1| hypothetical protein bcere0028_28350 [Bacillus cereus AH1271]
Length = 219
Score = 99 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++LG
Sbjct: 15 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYR---FKTNDGVKTDAGIVLGA-- 64
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 65 ------ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKDEDILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSD 205
I AS +
Sbjct: 175 IEAYASPTP 183
>gi|229060751|ref|ZP_04198106.1| hypothetical protein bcere0026_28450 [Bacillus cereus AH603]
gi|228718398|gb|EEL70030.1| hypothetical protein bcere0026_28450 [Bacillus cereus AH603]
Length = 210
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 18/188 (9%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +K + F+L+ I + + ++ + ++LG
Sbjct: 5 KKSKKRRILQVFLLMICSI-ILYVSYAAYDIWSYRFKT-----DDDVKTDAGIVLGA--- 55
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 56 -----ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARVY 106
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H I
Sbjct: 107 ALKHGVKEEDILIETKSLFTEENLKNAKQVGIENGIRTYTIVSDPLHMKRAMKIAKHIKI 166
Query: 198 NTKASCSD 205
AS +
Sbjct: 167 EAYASPTP 174
>gi|326692926|ref|ZP_08229931.1| membrane protein [Leuconostoc argentinum KCTC 3773]
Length = 316
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 53/252 (21%), Positives = 99/252 (39%), Gaps = 37/252 (14%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIF------FMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
+L+ I ++ W+ +S R + ++ +LL + W + LL + + +
Sbjct: 68 ILMGVILMLSIAWYSWKKSRRLLVSGIIGGYLISLVLLSPWSLWRMAAPWLLFYFVWQFS 127
Query: 55 RPLLSP------QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
R L+S +V+LG G A +RI + K
Sbjct: 128 RFLISSVAYGIVSRPPKAGPLVVLGGGL-------ADGYHVGKIVDARIRAAV---LDAK 177
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKL-LESGVERDDIKLETQSLDTFQNAQFSSSM 167
+ S I+ SGG +E+ L GV +LE QS +T QN ++S+++
Sbjct: 178 KMSPFPIIVFSGGQGDDQRRSEAAAMREHAVLRYGVPLAQTRLEDQSRNTIQNFRYSAAL 237
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ G+ + +S YH+ R L Q GI+ + ++ + IP L
Sbjct: 238 LD---GQPLTFYTSDYHVFRGALIAQTLGISARGRGG--VSVWRHRIP---------AFL 283
Query: 228 KEYIGILIAYYR 239
+E+ G++ + R
Sbjct: 284 REFAGVMSLHKR 295
>gi|160899211|ref|YP_001564793.1| hypothetical protein Daci_3776 [Delftia acidovorans SPH-1]
gi|160364795|gb|ABX36408.1| protein of unknown function DUF218 [Delftia acidovorans SPH-1]
Length = 280
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/245 (17%), Positives = 84/245 (34%), Gaps = 28/245 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L + + L+ L +I + S ++ ++GW + L+ L F S
Sbjct: 56 LPAVLGLLFMACSLWRSAIARRLRASAWLRRAWWLGWAALAMWLVSLLVFWAHLLSASSG 115
Query: 62 WKKDG--NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
D IV+LG+ T +PS R+ L ++ S
Sbjct: 116 LPPDQPVQAIVVLGSATRD--------GQPSLTLAQRLDRAAELAA----RQPKALVLTS 163
Query: 120 GGDPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--- 175
GG +E + L + + + + +E +S T N +S +++ +
Sbjct: 164 GGVDFGESESEGAIMARYLQQRHGLPPERLLMEERSTSTALNLAWSLPLLQARGVEPQAA 223
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
I +V+S +H R+ + G Y A+ P L+EY ++
Sbjct: 224 IAIVTSDFHTLRAGWIAERSG---------YGQAFTVGAPTPVTI-RANAWLREYFAVIS 273
Query: 236 AYYRG 240
+ G
Sbjct: 274 GWVLG 278
>gi|50084012|ref|YP_045522.1| hypothetical protein ACIAD0798 [Acinetobacter sp. ADP1]
gi|49529988|emb|CAG67700.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter sp. ADP1]
Length = 221
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 86/232 (37%), Gaps = 22/232 (9%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+ WH + + + F + ++ F W + ++L+ + + + D
Sbjct: 5 LCTYALLWHQIQTFLNQHFVVKRWIKFAWFGFWIWLLSVLIFFIYIDHSTQNI--PKTND 62
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
I++LG+G +PS R+ K II+SGG +
Sbjct: 63 VKAIIVLGSGVEN--------GQPSAILAERLNTAAHFAKDH----PAALIILSGGLDHR 110
Query: 126 HGLAESIVYNNKLLESGVE-RDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSS 181
E+ V L + R+ + LE QS T N + S +++ Q I++V+S
Sbjct: 111 EQQTEAEVMRRYLKQQFPALRNTLALEDQSTSTELNLKNSKPILEQHQILLNDPIVIVTS 170
Query: 182 AYHLKRSQLYFQHFGIN---TKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+H RS+ +S + + Y + + F ++ L+EY
Sbjct: 171 DFHTIRSKAIAHKQQYQQAYMLSSPTPVMTRYNAWLREYFAF-ISGWILREY 221
>gi|264678457|ref|YP_003278364.1| hypothetical protein CtCNB1_2322 [Comamonas testosteroni CNB-2]
gi|262208970|gb|ACY33068.1| hypothetical conserved protein [Comamonas testosteroni CNB-2]
Length = 270
Score = 99.5 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 76/217 (35%), Gaps = 34/217 (15%)
Query: 33 FSFIGWGIIPTILLK--HLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+GW ++ L+ L+PQ IV+LG+GT + P
Sbjct: 77 LWSLGWVVLALWLISLFWFWSRLSGLGLAPQQVPPVQSIVVLGSGT--------LDGHPR 128
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG-VERDDIK 149
+R+ + +L K + + GG +E+ V L + + +
Sbjct: 129 PVLAARLDQAAQLAK----LQPQALVAVCGGVDWGEKESEAEVMARYLQQHHGIAAQRLV 184
Query: 150 LETQSLDTFQNAQFSSSMIKNMQ---GKNIILVSSAYHLKRSQLYFQHFGIN---TKASC 203
LE S T N + S ++ + +VSS +HL R+ + + A+
Sbjct: 185 LEKLSTSTELNLKLSRPLLAERGVTADAPMAMVSSDFHLMRAMDIAKRQDLPQVYPVAAP 244
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ PL+ F L+EY + ++ G
Sbjct: 245 T----------PLATRF---NAWLREYFAMASSWLLG 268
>gi|229167811|ref|ZP_04295543.1| hypothetical protein bcere0007_27710 [Bacillus cereus AH621]
gi|228615627|gb|EEK72720.1| hypothetical protein bcere0007_27710 [Bacillus cereus AH621]
Length = 210
Score = 99.5 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 72/188 (38%), Gaps = 18/188 (9%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +K + F+L+ I + + ++ + ++LG
Sbjct: 5 KKSKKRRILQVFLLMICSI-ILYVSYAAYDIWSYRFKT-----DDGVKTDAGIVLGA--- 55
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 56 -----ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEEELEEARTARVY 106
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ GV+ +DI +ET+SL T N + + + + +VS H+KR+ +H I
Sbjct: 107 ALKHGVKEEDILIETKSLFTEDNLKNAKQVGIENGIRTYTIVSDPLHMKRAMKIAKHIKI 166
Query: 198 NTKASCSD 205
AS +
Sbjct: 167 EAYASPTP 174
>gi|108797853|ref|YP_638050.1| hypothetical protein Mmcs_0878 [Mycobacterium sp. MCS]
gi|119866947|ref|YP_936899.1| hypothetical protein Mkms_0895 [Mycobacterium sp. KMS]
gi|108768272|gb|ABG06994.1| protein of unknown function DUF218 [Mycobacterium sp. MCS]
gi|119693036|gb|ABL90109.1| protein of unknown function DUF218 [Mycobacterium sp. KMS]
Length = 193
Score = 99.5 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 12/137 (8%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T+ I R+ + + + II++GG+P+ +G
Sbjct: 44 AIVILGYGLEPNGTMRPI-------LRRRVITGLTVAQ----FFPQSPIIVTGGNPR-NG 91
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++E+ LL G I +E ++ T QNA+FS + + IILV+S+ H R
Sbjct: 92 VSEAAAMRRMLLVLGFPDHRIIVEDKANSTVQNARFSVPLAEKAGTSGIILVTSSTHQDR 151
Query: 188 SQLYFQHFGINTKASCS 204
+ F G N A+ S
Sbjct: 152 ADGNFVDAGANLLATVS 168
>gi|116496133|ref|YP_807867.1| hypothetical protein LSEI_2710 [Lactobacillus casei ATCC 334]
gi|116106283|gb|ABJ71425.1| hypothetical protein LSEI_2710 [Lactobacillus casei ATCC 334]
Length = 360
Score = 99.5 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 49 LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
L + P P+ V+LG + P+ + + + + +
Sbjct: 169 LDIQTKIPNDLPKDSHH--YFVVLG-----------YALSPNGKMQPTMKKRLEIALKAA 215
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ I+++GG P+ + L E+ V L+ G+ + I+LE S +T +NA FS +
Sbjct: 216 KKYPKSKILVAGGVPE-NKLTEATVMQKWLVAHGIAKKRIELEDLSTNTVENALFSVREL 274
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+ + L++SA H++R+ L ++ G AS +
Sbjct: 275 VDRGATSATLITSATHMRRAFLLYRMAGDIVLASNTS 311
>gi|153801022|ref|ZP_01955608.1| integral membrane protein [Vibrio cholerae MZO-3]
gi|124123492|gb|EAY42235.1| integral membrane protein [Vibrio cholerae MZO-3]
Length = 187
Score = 99.5 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 14/174 (8%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRPLLSPQ 61
LI+ + L+ C ++LFS G + + T LL L+ +Y L
Sbjct: 18 LLIIGFVGLMLIMFTAKRKTGCLVVLFSLTGLFLVSFQPVATRLLMPLERTYTAFL---P 74
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +++LGNG I IP E + + R+ E +R+ + +I+SG
Sbjct: 75 VEGTLDYVMVLGNGHVIDDDIPPTS-ELTRAALMRLTEGIRISRMY----PGSKLILSGY 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
++ + + L GV + DI L + DT++ A+ +++ ++ G
Sbjct: 130 AGGSE-VSHARMMARVALALGVPKSDIILLETAKDTWEEARQAAAFVQKTYGAR 182
>gi|332686094|ref|YP_004455868.1| hypothetical protein MPTP_0591 [Melissococcus plutonius ATCC 35311]
gi|332370103|dbj|BAK21059.1| hypothetical protein MPTP_0591 [Melissococcus plutonius ATCC 35311]
Length = 196
Score = 99.2 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 28/187 (14%)
Query: 18 QSIRKIFFMSCFMLL----FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ I+KI + M+ F FI L +++PL S NII++LG
Sbjct: 2 KRIKKIAYCLLGMIFTYGCFLFICI----------LSNIHEKPLSSSP-----NIILVLG 46
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
I + P +R+ T+ K+HS II+ GG E+ V
Sbjct: 47 A---RIYGTEKRKAYPGSVLKTRLDTTLAY---IKKHSSTTKIIVCGGKGALEPTTEASV 100
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L + G+ R + E +S T +N Q++ ++ + +L++S +HL RS+ +
Sbjct: 101 MATYLNKHGIPRQKLIQEKRSTRTKENIQYAMKLV---NLDHALLITSDFHLYRSKWLAK 157
Query: 194 HFGINTK 200
GI++
Sbjct: 158 QLGIHSI 164
>gi|78045108|ref|YP_360909.1| hypothetical protein CHY_2090 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77997223|gb|ABB16122.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 203
Score = 99.2 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 31 LLFSFIGWGIIPTILLK--HLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
++F+F G +I I L + PL + + + +V+L G T +
Sbjct: 6 IIFAFFGLTLIFLIAAWFFPLNYYLALPLTIKENPQPADAVVVLSGGLTKKGDL------ 59
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
+ R+ + L+K+ +++SGG + ++ + + L+ GV +
Sbjct: 60 -GESTRERLNLGINLWKNDYGRY----LLLSGGSFTREP-KDASLMAKEALKKGVPAPAL 113
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS-CSDYL 207
LE+ S +T++N ++++ + K I++V+SAYH R + + G+N + L
Sbjct: 114 LLESSSENTYENVLLTANIYYQNRWKRILVVTSAYHTLRVKKMYNDRGVNATVVYPAGEL 173
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ T + ++EY+ +L +
Sbjct: 174 PNARGLL----RLRQTIVVVEEYLKLLYYF 199
>gi|126433493|ref|YP_001069184.1| hypothetical protein Mjls_0884 [Mycobacterium sp. JLS]
gi|126233293|gb|ABN96693.1| protein of unknown function DUF218 [Mycobacterium sp. JLS]
Length = 193
Score = 99.2 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 12/137 (8%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T+ I R+ + + + II++GG+P+ +G
Sbjct: 44 AIVILGYGLEPNGTMRPI-------LRRRVITGLTVAQ----FFPQSPIIVTGGNPR-NG 91
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++E+ LL G I +E ++ T QNA+FS + + IILV+S+ H R
Sbjct: 92 VSEAAAMRRMLLVLGFPDHRIIVEDRANSTVQNARFSVPLAEKAGTSGIILVTSSTHQDR 151
Query: 188 SQLYFQHFGINTKASCS 204
+ F G N A+ S
Sbjct: 152 ADGNFVDAGANLLATVS 168
>gi|295115532|emb|CBL36379.1| Uncharacterized conserved protein [butyrate-producing bacterium
SM4/1]
Length = 275
Score = 99.2 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 79/205 (38%), Gaps = 48/205 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
KK + +++LG EPS R+ + +++ + +++SGG
Sbjct: 92 KKSMDYVIVLGA--------KVNGTEPSNSLKKRLDRAI----DYAENNPNTFLVLSGGQ 139
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK------------- 169
+ +AE+ V L +GV + LET+S +T +N ++S +I+
Sbjct: 140 GKDEEIAEAEVMYEYLRYNGVPETQLLLETRSTNTRENIRYSLEVIRSQEQWKERVFQQI 199
Query: 170 -------------NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
+ +I +++S +HL R++ + G+ Y I
Sbjct: 200 FKEVGENAYAPGDELDSIHIGILTSDFHLFRAKAIAKKQGV----------RNVYGISAP 249
Query: 217 SANFYLTELALKEYIGILIAYYRGN 241
S + L L+E IL + GN
Sbjct: 250 SDPLLIPNLWLRECFAILKDKFMGN 274
>gi|312880505|ref|ZP_07740305.1| protein of unknown function DUF218 [Aminomonas paucivorans DSM
12260]
gi|310783796|gb|EFQ24194.1| protein of unknown function DUF218 [Aminomonas paucivorans DSM
12260]
Length = 263
Score = 98.8 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 36/236 (15%), Positives = 76/236 (32%), Gaps = 20/236 (8%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W + + + ++ + ++ L+ + L +V+L
Sbjct: 33 WRRPRRPALAATLGALALGVYV-LSCPFGERLVTAPLEDRVRPSLPEGDAPA---AVVVL 88
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G I P + R+ + + C G +E
Sbjct: 89 GGGVRYDER--GEPILPGAYTLERLVTAAEVARDRGWPLFCCGGR----VQGGTGGSEGD 142
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ L + ET S T++N ++++ + ++LV+S +H+ RS
Sbjct: 143 LMARVLRSWN-PGVAVTAETGSRTTWENLVRVGTLLQERDIRRVVLVTSTFHMPRSLASA 201
Query: 193 QHF--GINTKASCSDYLN-----AYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ G+ + L +PLS N + L L+E++G+ G
Sbjct: 202 RRLLPGLEVHPWPAGRLTDRSPLGAADYLPLSLN--ASVLGLREWVGLGAYEVFGR 255
>gi|308069364|ref|YP_003870969.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
gi|305858643|gb|ADM70431.1| DUF218 domain containing protein [Paenibacillus polymyxa E681]
Length = 228
Score = 98.8 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 66/180 (36%), Gaps = 21/180 (11%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ K + + + + W I + S + I ++LG
Sbjct: 27 VSKRLVLCLMIFILVGLVWAGIRVWDMNT--------AASTTPLQQVQIGIVLGA----- 73
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG-DPQKHGLAESIVYNNKL 138
EPS R+ E +RLY++ +I+SGG D E+ L
Sbjct: 74 ---SMWGAEPSPGLKERLEEALRLYRNGTVQ----RLIVSGGLDKPDFPYTEAEGMQRYL 126
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
++ GV I LE + T++N +S ++ + ++++ +YH R+ Q +
Sbjct: 127 VDRGVPVQHIVLENHATSTYENLLYSQRIMSEYGWISTVIITHSYHGPRAMEIAQFLKFD 186
>gi|226365146|ref|YP_002782929.1| hypothetical protein ROP_57370 [Rhodococcus opacus B4]
gi|226243636|dbj|BAH53984.1| hypothetical protein [Rhodococcus opacus B4]
Length = 280
Score = 98.8 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 12/153 (7%)
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
S+ P P + I++LG G +P + P + +R+ M S
Sbjct: 103 SFTPPNPLPAIQGPSTAIIVLGFGL-----LPDGTMRP--ELVNRLQAAM----VQSWVS 151
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
II++GG+PQ +G+ E+ L GV D I E ++ T NA S + +++
Sbjct: 152 PMSPIIVTGGNPQ-NGITEAAAMEGWLRSHGVPADRIHPEHRAGSTVGNALNSVPLARSL 210
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
ILV+SA H++R+ + F G+ + S
Sbjct: 211 GAGGAILVTSANHIRRATVDFNVAGLPVVGAMS 243
>gi|332525839|ref|ZP_08401980.1| hypothetical protein RBXJA2T_08305 [Rubrivivax benzoatilyticus JA2]
gi|332109390|gb|EGJ10313.1| hypothetical protein RBXJA2T_08305 [Rubrivivax benzoatilyticus JA2]
Length = 267
Score = 98.8 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 41/237 (17%), Positives = 79/237 (33%), Gaps = 22/237 (9%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQR---PLLSPQWKKDGNIIV 70
+L + ++ +L + L+ L + G IV
Sbjct: 36 WMLRRRALGWLPLAAGVLALWAVCTPAGSHWLVARLTQPPAALGADEVRALRDAPGTAIV 95
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGL 128
+LG G + S R+ + L + + SGG + G
Sbjct: 96 VLGAGIYPEAPEYGAAVLKPL-SAQRLRYGVWLARR-----TGLPLAFSGGRGHHARSGP 149
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL--- 185
+E+ V L E ET+S DT +NA S +++ I+LV++ +H+
Sbjct: 150 SEAEVAAATLAEDHGMVLR-WAETRSRDTHENAVHSVALLHEAGITRIVLVTNGFHMRRA 208
Query: 186 ---KRSQLYFQHFGINTKASCSDYLNAY----YSIIPLSANFYLTELALKEYIGILI 235
Q + A+ + ++P + L+ +A+ E++G L
Sbjct: 209 LAAFERAAARQGVPMQLVAAPTGTRPERPLEGGDLLPDPEAYRLSWIAMHEWLGRLA 265
>gi|283796161|ref|ZP_06345314.1| conserved hypothetical protein [Clostridium sp. M62/1]
gi|291076380|gb|EFE13744.1| conserved hypothetical protein [Clostridium sp. M62/1]
gi|295092203|emb|CBK78310.1| Uncharacterized conserved protein [Clostridium cf. saccharolyticum
K10]
Length = 275
Score = 98.8 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 79/205 (38%), Gaps = 48/205 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
KK + +++LG EPS R+ + +++ + +++SGG
Sbjct: 92 KKSMDYVIVLGA--------KVNGTEPSNSLKKRLDRAI----DYAENNPNTFLVLSGGQ 139
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK------------- 169
+ +AE+ V L +GV + LET+S +T +N ++S +I+
Sbjct: 140 GKDEEIAEAEVMYEYLRYNGVPETQLLLETRSTNTRENIRYSLEVIRSQEQWKERVFQQI 199
Query: 170 -------------NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
+ +I +++S +HL R++ + G+ Y I
Sbjct: 200 FKEVGENAYAPGDELDSIHIGILTSDFHLFRAKAIAKKQGV----------RNVYGISAP 249
Query: 217 SANFYLTELALKEYIGILIAYYRGN 241
S + L L+E IL + GN
Sbjct: 250 SDPLLIPNLWLRECFAILKDKFMGN 274
>gi|241760602|ref|ZP_04758694.1| periplasmic protein [Neisseria flavescens SK114]
gi|241318783|gb|EER55309.1| periplasmic protein [Neisseria flavescens SK114]
Length = 218
Score = 98.8 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 71/186 (38%), Gaps = 16/186 (8%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
LL +++ + L + GI L Y+ L + + V+
Sbjct: 1 MISLLKSRNGLRYYLFRGLALSVLLVCGIF----LAGTWQIYRTGLQTLPKDAHADAAVV 56
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG A PS RI + LY+S + II +G +K + E+
Sbjct: 57 LGA--------AAWDKRPSPVFRERINHAITLYQSHRVG----KIIFTGSTSKKGFMTEA 104
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
V L+ G+ +I E S +T++N + ++ +II+VS YHL R++
Sbjct: 105 EVGRRYALKQGIPAHNILFENTSRNTYENLRNIIPIMHANGVGSIIVVSDPYHLARAEEM 164
Query: 192 FQHFGI 197
G+
Sbjct: 165 AADLGL 170
>gi|21229858|ref|NP_635775.1| hypothetical protein XCC0380 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66766735|ref|YP_241497.1| hypothetical protein XC_0392 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188989803|ref|YP_001901813.1| hypothetical protein xccb100_0407 [Xanthomonas campestris pv.
campestris str. B100]
gi|21111359|gb|AAM39699.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572067|gb|AAY47477.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167731563|emb|CAP49738.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris]
Length = 205
Score = 98.8 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 18/168 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++I++LG A PS RI + LY ++ +G
Sbjct: 43 DQAAPADVIIVLGA--------AAYDARPSPVFEERIRHALDLYA----RGYAPHLLFTG 90
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G AES V L GV + I +ET S T QN + ++++ I+VS
Sbjct: 91 GFGNGARFAESQVARRYALRHGVPSEAIVIETSSRTTRQNLLQARALMERHGMHRAIIVS 150
Query: 181 SAYHLKRSQLYFQHFGINTKASCS------DYLNAYYSIIPLSANFYL 222
H+ R+ Q G++ AS + + ++ ++ F+
Sbjct: 151 DPLHMARALRLCQELGVDALASSTPSTRFRSFHTSWRFLLQEVYYFHR 198
>gi|253582533|ref|ZP_04859755.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251835678|gb|EES64217.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 351
Score = 98.8 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG + EP R+ + + +Y+ + + II++GG P+ G
Sbjct: 182 AIVILG----YALGENGVMKEPLI---GRLEQGLAMYR----KNPNAEIIVTGGVPKG-G 229
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ + L+E GV + +E Q+ DT NA +S ++K + +N+ L+SSA H++R
Sbjct: 230 VTEAYLMKKWLVEKGVNPSKVHIEDQAKDTVGNALYSVEIMKKLGTENMTLISSASHMRR 289
Query: 188 SQLYFQ 193
F+
Sbjct: 290 GLAVFK 295
>gi|300932867|ref|ZP_07148123.1| hypothetical protein CresD4_02296 [Corynebacterium resistens DSM
45100]
Length = 341
Score = 98.8 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 35/255 (13%), Positives = 80/255 (31%), Gaps = 42/255 (16%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ +R + C L + + + S + + I++LG G
Sbjct: 86 SRKVRALGGFGCLAWLGLANHFSRFVLKGVASTKKLVNESPHSDRQLAAADAIIVLGAGL 145
Query: 77 TIIPTIPAIRIEPSFQS-YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
T P + + +R E +R II+SGG +E+
Sbjct: 146 TGRKPSPVLARRLDRAAQVARQLEAIR---PAVVAGQQGVIIVSGGQGADEPCSEAEAMA 202
Query: 136 NKLL---ESGVERDD--IKLETQSLDTFQNAQFSSSMIKNMQGK---------------- 174
L + G + E ++ T +N S+ +++ +
Sbjct: 203 RYLRTEAQLGGADSRWEVLQEDEATSTEENLANSTRILQERRAGTSGTNTGTPGTNTANP 262
Query: 175 -----------NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLT 223
I++V+S +H+ R++ + +H + + A A +
Sbjct: 263 GSRTKRDDEMCTIVVVTSDFHVPRTRWHAKHAERDFPGVAYRVVGAETPAGARPAAY--- 319
Query: 224 ELALKEYIGILIAYY 238
++EY+ ++ +
Sbjct: 320 ---VREYVASVVQVW 331
>gi|319945126|ref|ZP_08019388.1| hypothetical protein HMPREF0551_2236 [Lautropia mirabilis ATCC
51599]
gi|319741696|gb|EFV94121.1| hypothetical protein HMPREF0551_2236 [Lautropia mirabilis ATCC
51599]
Length = 335
Score = 98.4 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 70/182 (38%), Gaps = 17/182 (9%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+++ +G P P R++ Y R+ + ++ + ++
Sbjct: 161 VIVPSSG-AAAPNGPQARLDQG--GYMRLRAGIETWRRTGGLLVLMGG-----LGEQPEY 212
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-----IILVSSAY 183
+ + + GV + I+ S TFQ+ ++ +I+ G++ +ILV+SA
Sbjct: 213 SLAADMRRLAIGLGVPPEAIRTVRSSWTTFQDISGAARLIREEGGQDDSRQAVILVTSAL 272
Query: 184 HLKRSQLYFQHFGINTKASCSDYLN----AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
H++RS G++ SDY + + P + + L E IG+ R
Sbjct: 273 HMQRSLAVAHQAGLDPIPVRSDYRQLASPTWAAWFPNNGAPWNARAMLHELIGVWYYRLR 332
Query: 240 GN 241
G
Sbjct: 333 GR 334
>gi|256851647|ref|ZP_05557035.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN]
gi|260661636|ref|ZP_05862548.1| conserved hypothetical protein [Lactobacillus jensenii 115-3-CHN]
gi|282933297|ref|ZP_06338683.1| putative membrane protein [Lactobacillus jensenii 208-1]
gi|297205255|ref|ZP_06922651.1| conserved hypothetical protein [Lactobacillus jensenii JV-V16]
gi|256615605|gb|EEU20794.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN]
gi|260547693|gb|EEX23671.1| conserved hypothetical protein [Lactobacillus jensenii 115-3-CHN]
gi|281302593|gb|EFA94809.1| putative membrane protein [Lactobacillus jensenii 208-1]
gi|297149833|gb|EFH30130.1| conserved hypothetical protein [Lactobacillus jensenii JV-V16]
Length = 361
Score = 98.4 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 98/266 (36%), Gaps = 47/266 (17%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG---------WGIIPTIL-----LKH 48
+W+FL+ + + + + M L F+ IG W +P L L
Sbjct: 92 FAWLFLLWNAYFVWKYESHTLPNMLTLFLGFALIGLWIYQKFTHWLHLPPYLAPILGLAP 151
Query: 49 LQFSYQRPLLSP-----------QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+Y ++ N +++LG G + S +RI
Sbjct: 152 TIATYLTIVMLSFIINVFLYQFYPKNHRENYLIVLGAGLIN-------GTKISTLLANRI 204
Query: 98 FETMRLYKSCKQHSMH-CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
++ K K+ + + II+SGG L E+ +++G+ R+ I LE QS
Sbjct: 205 NTAIKYAKKVKKKTGNWPKIIMSGGQGPDEELPEAAAMAEYAIKAGIPREIIILENQSTT 264
Query: 157 TFQNAQFSSSMIK---NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T +N FS +I+ + S+ YH+ R+ L + +N +
Sbjct: 265 TLENMTFSKKIIEKDTKNKPYTCKFFSNNYHIFRAALLAKKAKLNANGVGAP-------- 316
Query: 214 IPLSANFYLTELALKEYIGILIAYYR 239
+ +YL L+E+ GI + +
Sbjct: 317 ---TRLYYLPNALLREFAGIFVLNKK 339
>gi|111022641|ref|YP_705613.1| hypothetical protein RHA1_ro05676 [Rhodococcus jostii RHA1]
gi|110822171|gb|ABG97455.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 300
Score = 98.0 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
S+ P P + I++LG G +P + P + +R+ + +
Sbjct: 123 SFTPPNPLPAIQGPSTAIIVLGYGL-----LPDGAMRP--ELINRLQAALVQSWASPMS- 174
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
II++GG+PQ +G+ E+ L GV I E ++ T NA S + +++
Sbjct: 175 ---PIIVTGGNPQ-NGITEAAAMQGWLQSHGVPAQRIHPEHRAGSTVGNALNSVPLARSL 230
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
I+V+SA H++R+ + F G+ + S
Sbjct: 231 GAGGAIIVTSANHIRRATVDFNVAGLPVVGAMS 263
>gi|294668207|ref|ZP_06733314.1| putative periplasmic protein [Neisseria elongata subsp. glycolytica
ATCC 29315]
gi|291309915|gb|EFE51158.1| putative periplasmic protein [Neisseria elongata subsp. glycolytica
ATCC 29315]
Length = 194
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 72/192 (37%), Gaps = 26/192 (13%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y+ + +G+ V+LG A PS RI + LY+S K +
Sbjct: 13 YRSGAAALPQDYNGDAAVVLGA--------AAWDSRPSPVFRERINHAIVLYQSGKVRKL 64
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+GG + ++E+ V + GV DI +E S T++N ++
Sbjct: 65 A----FTGGAIKPGFMSEAEVGMRYAVRQGVPVHDILIEKTSRTTYENLYNIRPLLNEQG 120
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE---LALKE 229
+N ++VS HL R+ + + G+ + S + P + + L+E
Sbjct: 121 LQNNVIVSDPLHLARAGVMAEDLGMEAELSAT----------PTTRYTDRADKIKFWLRE 170
Query: 230 YIGILIAYYRGN 241
+L YY
Sbjct: 171 TF-LLAGYYIWR 181
>gi|300071488|gb|ADJ60888.1| hypothetical protein LLNZ_09840 [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 361
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 85/240 (35%), Gaps = 36/240 (15%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ W++L + L I + +L ++ W L + R
Sbjct: 128 LLIDWVYLSMG--RLPDSWIWLKILGIVYPVLSIYLAWQFGIFFLSSWVYGRRVR----- 180
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K+ V+LG G +RI ++ + + ++ SG
Sbjct: 181 --KQRAAYHVVLGAGLIQ-------GEHVGKLLGNRILAAVKAVRDNET-----ILVFSG 226
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G ++E+ +E G + LE QS T++N FSS +IK +
Sbjct: 227 GQGPDEKISEARAMQKYAVEVLGFPIERTMLEDQSRTTYENLVFSSRLIKE----KFMFF 282
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+S YH+ R+ L+ I+ + +A +Y ++E+I ++ R
Sbjct: 283 TSDYHVFRAALFAATLKIDAQG----------GKGGKTAMYYRVPAFIREFIAVMNYEKR 332
>gi|296133679|ref|YP_003640926.1| protein of unknown function DUF218 [Thermincola sp. JR]
gi|296032257|gb|ADG83025.1| protein of unknown function DUF218 [Thermincola potens JR]
Length = 202
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 72/176 (40%), Gaps = 15/176 (8%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+++ F G+ I+ L L PL+ + + IV+L G +
Sbjct: 8 LVITLFTGFLIL---LYTPLIQYAASPLIVKDPLQKADAIVVLSGG-------WKAKGVL 57
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ R ++L++ II SGG+ + + L +G + +
Sbjct: 58 GTSTLERYQYGIKLFQ----KKFAPVIIFSGGNLLGRPAEADAMADMAL-SAGFPYEAVI 112
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E S T++N F++ +++ + K+IILV+S YH R++ F+ + A+
Sbjct: 113 SENASASTYENVLFTTKILQEKRLKSIILVTSPYHTYRAKKMFEDKQVKVTAAPVP 168
>gi|125624693|ref|YP_001033176.1| hypothetical protein llmg_1911 [Lactococcus lactis subsp. cremoris
MG1363]
gi|124493501|emb|CAL98480.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
Length = 361
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 85/240 (35%), Gaps = 36/240 (15%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ W++L + L I + +L ++ W L + R
Sbjct: 128 LLIDWVYLSMG--RLPDSWIWLKILGIVYPVLSIYLAWQFGIFFLSSWVYGRRVR----- 180
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K+ V+LG G +RI ++ + + ++ SG
Sbjct: 181 --KQRAAYHVVLGAGLIQ-------GEHVGKLLGNRILAAVKAVRDNET-----ILVFSG 226
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G ++E+ +E G + LE QS T++N FSS +IK +
Sbjct: 227 GQGPDEKISEARAMQKYAVEVLGFPIERTMLEDQSRTTYENLVFSSRLIKE----KFMFF 282
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+S YH+ R+ L+ I+ + +A +Y ++E+I ++ R
Sbjct: 283 TSDYHVFRAALFAATLKIDAQG----------GKGGKTAMYYRVPAFIREFIAVMNYEKR 332
>gi|312622108|ref|YP_004023721.1| hypothetical protein Calkro_1031 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202575|gb|ADQ45902.1| protein of unknown function DUF218 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 195
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 12/136 (8%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K + I++LG PS R+ LYK I++ G
Sbjct: 35 PKKSDCIIVLGCAVYGD--------FPSPFFRERLNRAFELYKKGYARY----IVVCGAK 82
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ L+E GV + E +S T++N + ++ K+ I+VS+
Sbjct: 83 GPGENISEAEAGKRYLVEMGVLPKFVLKEDKSFSTYENLLHAKRVMNKKGFKSAIIVSNM 142
Query: 183 YHLKRSQLYFQHFGIN 198
+HL+R+ L + IN
Sbjct: 143 FHLERAHLIAKKLKIN 158
>gi|329930883|ref|ZP_08284276.1| hypothetical protein HMPREF9412_5832 [Paenibacillus sp. HGF5]
gi|328934500|gb|EGG31008.1| hypothetical protein HMPREF9412_5832 [Paenibacillus sp. HGF5]
Length = 210
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 70/190 (36%), Gaps = 22/190 (11%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGI-IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+++ L+ + + + + + K+ + P + ++LG
Sbjct: 11 GSRRKRVLLRVVLGLIAIMLVYSVNVGYTIWKYAGRTVNIPS---------DAAIVLGAA 61
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+PS RI + + LY +I +GG + +AES
Sbjct: 62 V--------WEGKPSPVFQGRIDQALWLYDQQYVD----KLIFTGGRGSEDEVAESEAAK 109
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
++ GV DI +ET S T QN ++ + + ++VS H+KR+ + +
Sbjct: 110 QYAIKHGVPERDILVETTSAITEQNLYYADKLGDAAGLSSYLIVSDPLHMKRAMVMAEDM 169
Query: 196 GINTKASCSD 205
G+ S +
Sbjct: 170 GLEANPSPAS 179
>gi|327386938|gb|AEA58412.1| hypothetical protein LCBD_2918 [Lactobacillus casei BD-II]
Length = 360
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 49 LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
L + P P+ V+LG + P+ + + + + +
Sbjct: 169 LDIQTKIPNDLPKDSHH--YFVVLG-----------YALSPNGKMQPTMKKRLEIALKAA 215
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ I+++GG P+ + L E+ V L+ G+ + I+LE S +T +NA FS +
Sbjct: 216 KKYPKSKILVAGGVPE-NKLTEATVMQKWLVAHGIAKKRIELEDLSTNTVENALFSVREL 274
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
N + + L++SA H++R+ L +Q G AS +
Sbjct: 275 VNREATSATLITSATHMRRAFLLYQMAGDIVLASNTS 311
>gi|191639632|ref|YP_001988798.1| hypothetical protein LCABL_28900 [Lactobacillus casei BL23]
gi|190713934|emb|CAQ67940.1| Putative exported protein [Lactobacillus casei BL23]
gi|327383745|gb|AEA55221.1| hypothetical protein LC2W_2892 [Lactobacillus casei LC2W]
Length = 377
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 49 LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
L + P P+ V+LG + P+ + + + + +
Sbjct: 186 LDIQTKIPNDLPKDSHH--YFVVLG-----------YALSPNGKMQPTMKKRLEIALKAA 232
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ I+++GG P+ + L E+ V L+ G+ + I+LE S +T +NA FS +
Sbjct: 233 KKYPKSKILVAGGVPE-NKLTEATVMQKWLVAHGIAKKRIELEDLSTNTVENALFSVREL 291
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
N + + L++SA H++R+ L +Q G AS +
Sbjct: 292 VNREATSATLITSATHMRRAFLLYQMAGDIVLASNTS 328
>gi|317055190|ref|YP_004103657.1| hypothetical protein Rumal_0470 [Ruminococcus albus 7]
gi|315447459|gb|ADU21023.1| protein of unknown function DUF218 [Ruminococcus albus 7]
Length = 198
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 66/172 (38%), Gaps = 28/172 (16%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
++I++LG+ R+ E +RLY K I++SGG Q
Sbjct: 31 ADLIMVLGS---------------RKACDYRVPEAVRLYNEGK----APLILLSGGQVQD 71
Query: 126 HG---LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVS 180
+AE L G+ DI E S +T +N +S ++ G IILV+
Sbjct: 72 TSLGNMAEWESMKKAALALGISESDILAEKLSKNTAENFMYSDELLIGYLPLGSKIILVT 131
Query: 181 SAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+AYH++R+ F G + +A + T AL E+
Sbjct: 132 TAYHMRRALCMAHKFMPGYDFIPCPVQKGSATKENWYKTDKGRQT--ALDEW 181
>gi|323483771|ref|ZP_08089151.1| hypothetical protein HMPREF9474_00900 [Clostridium symbiosum
WAL-14163]
gi|323692744|ref|ZP_08106972.1| hypothetical protein HMPREF9475_01835 [Clostridium symbiosum
WAL-14673]
gi|323402962|gb|EGA95280.1| hypothetical protein HMPREF9474_00900 [Clostridium symbiosum
WAL-14163]
gi|323503186|gb|EGB19020.1| hypothetical protein HMPREF9475_01835 [Clostridium symbiosum
WAL-14673]
Length = 269
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 79/212 (37%), Gaps = 53/212 (25%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+ F+ + IGW + + ++ +++LG
Sbjct: 73 LVIFVAVELLIGWSAVTST------------------RRAAEYVIVLGA--------KVR 106
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
E S R+ + + +++ + +++SGG + ++E+ + L +G+
Sbjct: 107 GSELSNSLKKRLDKALE----YAENNPNTVLVLSGGKGEGEDISEAEAMYDYLQYNGIPE 162
Query: 146 DDIKLETQSLDTFQNAQFSSSMI--------------------KNMQGKNIILVSSAYHL 185
+ LE QS++T QN FS +I + I +++S YH+
Sbjct: 163 SQLLLEEQSVNTVQNIVFSKKVIDYQEKYKAMEARESLLDSYKERSDSVKIAVLTSNYHV 222
Query: 186 KRSQLYFQHFG---INTKASCSDYLNAYYSII 214
R++ + G I+ A+ D + A + +
Sbjct: 223 FRAKSIARKQGIYNISGIAAPGDPVLAIHMWV 254
>gi|255068087|ref|ZP_05319942.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
gi|255047685|gb|EET43149.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
Length = 195
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 24/206 (11%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
++ I +I + L + + + Q K +I V+LGN R +P
Sbjct: 4 WIIGGLIPLLLIWETSVAWLHYQAVQAEKASQNIKPADIAVILGNSVNR-------RGKP 56
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ SR+ + LY+ K +++SGG G E+ + ++ G+ + I+
Sbjct: 57 NPCLRSRVEAGVALYRQNKVSG----LLMSGGT-DGDGSNEAAAMQSMAIDMGIPPEHIR 111
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASCS--- 204
+E +S TF+N S+ ++++ N+I+VS A+HL R++ G N + S
Sbjct: 112 IENKSESTFENIALSAPLLQD--VSNVIIVSDAFHLARAEWLVNRHLKGKNVQFYASGSC 169
Query: 205 -----DYLNAYYSIIPLSANFYLTEL 225
+YL IP +
Sbjct: 170 GDSTPNYLRKLSREIPAWIKAMIMHR 195
>gi|253578606|ref|ZP_04855878.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850924|gb|EES78882.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 177
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 67/183 (36%), Gaps = 28/183 (15%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG + + E R + + ++SG
Sbjct: 20 RKHPNLEYIIVLGA------------HVEGTRLTKALLERTRRALQYMEENPETKAVLSG 67
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + E+ N L+E G++R+ + LE +S T +N +FS MI ++ +V+
Sbjct: 68 GKGDGESITEAQAMCNYLVEHGIDRERLILEEKSTSTTENLKFSLGMIGLNH--SVGIVT 125
Query: 181 SAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYS-IIPLSANFYLTELALKEYIGILIAYY 238
+ +H+ R + G S Y + IP +E + I+
Sbjct: 126 NNFHVFRGTAIGKKCGCREIYPIPSRYRSWRLLIYIP------------REILAIIKDKL 173
Query: 239 RGN 241
GN
Sbjct: 174 MGN 176
>gi|221066959|ref|ZP_03543064.1| protein of unknown function DUF218 [Comamonas testosteroni KF-1]
gi|220711982|gb|EED67350.1| protein of unknown function DUF218 [Comamonas testosteroni KF-1]
Length = 270
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 73/215 (33%), Gaps = 30/215 (13%)
Query: 33 FSFIGWGIIPTILLK--HLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+ W + L+ LSPQ IV+LG+GT + P
Sbjct: 77 LWSLAWAGLALWLISLFWFWSRLSGLGLSPQQVPPVQSIVVLGSGT--------LDGHPR 128
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG-VERDDIK 149
+R+ + +L + + + GG +E+ V L + + +
Sbjct: 129 PVLAARLDQAAQLAR----LQPQALVAVCGGVDWGEKESEAEVMARYLQQRHGIAAQRLV 184
Query: 150 LETQSLDTFQNAQFSSSMIKNMQ---GKNIILVSSAYHLKRSQLYFQHFGI-NTKASCSD 205
LE S T N + S ++ + +VSS +HL R+ + + +D
Sbjct: 185 LEKLSTSTELNLKLSRPLLAERGVAADAPMAMVSSDFHLMRAMDIAKRQDLPQVYPVAAD 244
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
PL+ F L+EY + ++ G
Sbjct: 245 --------TPLATRF---NAWLREYFAMASSWLLG 268
>gi|322615919|gb|EFY12836.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322620704|gb|EFY17564.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623945|gb|EFY20782.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627393|gb|EFY24184.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322630700|gb|EFY27464.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638080|gb|EFY34781.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640566|gb|EFY37217.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647705|gb|EFY44190.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322648055|gb|EFY44522.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322656912|gb|EFY53198.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657377|gb|EFY53649.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663697|gb|EFY59897.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666530|gb|EFY62708.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322672311|gb|EFY68423.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676377|gb|EFY72448.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322679530|gb|EFY75575.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686141|gb|EFY82125.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323194985|gb|EFZ80171.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323200106|gb|EFZ85193.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323201073|gb|EFZ86142.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323209470|gb|EFZ94403.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323212278|gb|EFZ97102.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323216583|gb|EGA01309.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222478|gb|EGA06848.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225789|gb|EGA10009.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323228670|gb|EGA12799.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236716|gb|EGA20792.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239783|gb|EGA23830.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323242169|gb|EGA26198.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249406|gb|EGA33322.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252259|gb|EGA36110.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256650|gb|EGA40380.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261316|gb|EGA44903.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265504|gb|EGA49000.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323271708|gb|EGA55126.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 206
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 36/228 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + I +I ++ FI I + + ++ G
Sbjct: 1 MKYRYITRIAAGIILIMATVFINNAIA------------IYQFSQQDQTRVADCAIVAGA 48
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + PS +R+ + LY+ + ++++GG ++++ +
Sbjct: 49 GVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAGATVSDAAIA 96
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+LE G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q
Sbjct: 97 RQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQD 156
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
GI++++S + Y S + L+E YY G R
Sbjct: 157 NGIDSRSSPT-RSTRYKSWWAQTRFL------LRET-----FYYSGYR 192
>gi|163940818|ref|YP_001645702.1| hypothetical protein BcerKBAB4_2882 [Bacillus weihenstephanensis
KBAB4]
gi|229133982|ref|ZP_04262803.1| hypothetical protein bcere0014_28980 [Bacillus cereus BDRD-ST196]
gi|163863015|gb|ABY44074.1| protein of unknown function DUF218 [Bacillus weihenstephanensis
KBAB4]
gi|228649475|gb|EEL05489.1| hypothetical protein bcere0014_28980 [Bacillus cereus BDRD-ST196]
Length = 210
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 72/188 (38%), Gaps = 18/188 (9%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +K + F+L+ I + + ++ + ++LG
Sbjct: 5 KKSKKRRILQVFLLMICSI-ILYVSYAAYDIWSYRFKT-----DDGVKTDAGIVLGA--- 55
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 56 -----ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARVY 106
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ GV+ +DI +ET+SL T N + + + + +VS H+KR+ +H I
Sbjct: 107 ALKHGVKEEDILIETKSLFTEDNLKNAKQVGIENGIRTYTIVSDPLHMKRAMKIAKHIKI 166
Query: 198 NTKASCSD 205
AS +
Sbjct: 167 EAYASPTP 174
>gi|108804095|ref|YP_644032.1| hypothetical protein Rxyl_1256 [Rubrobacter xylanophilus DSM 9941]
gi|108765338|gb|ABG04220.1| protein of unknown function DUF218 [Rubrobacter xylanophilus DSM
9941]
Length = 195
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 67/174 (38%), Gaps = 18/174 (10%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ V+LG+ +P R PS +R RLY+ + + T G +
Sbjct: 31 AEVAVVLGS-----QVLPGGR--PSGTLMARTLHAARLYRGGRVRLLIPT-----GGVGR 78
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
H +E+ + L +GV + LE ++L T+ +A++ S M + + +++V+ H
Sbjct: 79 HPPSEAEIMARLLRGAGVPGRAVLLEDRALSTWDSARYVSRMARGLGVGRVLVVTDPLHC 138
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R+ F+H G+ + F+ +E + R
Sbjct: 139 VRTVAAFRHAGLEAIPEPVYSSPMWRVRWLRLGQFF------REMGALAWYRAR 186
>gi|228959326|ref|ZP_04121021.1| hypothetical protein bthur0005_28140 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228800396|gb|EEM47318.1| hypothetical protein bthur0005_28140 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 219
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 72/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R+I F + I I+ + +SY+ + ++L
Sbjct: 15 KSKKRRI-----FQVFLLMICSAILYVSYAAYDIWSYRFKAND---DVKTDAGIVLSA-- 64
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 65 ------ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARV 114
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H
Sbjct: 115 YAMKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKHIN 174
Query: 197 INTKASCSD 205
I AS +
Sbjct: 175 IEAYASPTP 183
>gi|2181195|emb|CAA73878.1| hypothetical protein [Bordetella pertussis]
Length = 179
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 57/155 (36%), Gaps = 6/155 (3%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+RK L + W + T L + P L P + IV+LG G T
Sbjct: 31 RLRKTGAALIAGGLLWALAWSLPATSLWLGGALESRYPHLPPDQSPTADAIVVLG-GNTA 89
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ R+ L+++ + +++SGG + ++E+ ++
Sbjct: 90 NGRANWFLPYDKETAVVRVDTATELFQAGR----ASKVVLSGGALEG-DISEARGMAYRM 144
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+ GV + LE S T++NA + ++
Sbjct: 145 RQHGVPESALILENASRTTYENAALTEDTLRQHGI 179
>gi|239630563|ref|ZP_04673594.1| transporter [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301067717|ref|YP_003789740.1| hypothetical protein LCAZH_2704 [Lactobacillus casei str. Zhang]
gi|239526846|gb|EEQ65847.1| transporter [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300440124|gb|ADK19890.1| conserved hypothetical protein [Lactobacillus casei str. Zhang]
Length = 360
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 49 LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
L + P P+ V+LG + P+ + + + + +
Sbjct: 169 LDIQTKIPNDLPKDSHH--YFVVLG-----------YALSPNGKMQPTMKKRLEIALKAA 215
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ I+++GG P+ + L E+ V L+ G+ + ++LE S +T +NA FS +
Sbjct: 216 KKYPKSKILVAGGVPE-NKLTEATVMQKWLVAHGIAKKRVELEDLSTNTVENALFSVREL 274
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+ + L++SA H++R+ L ++ G AS +
Sbjct: 275 VDRGATSATLITSATHMRRAFLLYRMAGDIVLASNTS 311
>gi|116805286|gb|ABK27699.1| hypothetical protein [Lactobacillus paracasei]
Length = 363
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 49 LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
L + P P+ V+LG + P+ + + + + +
Sbjct: 172 LDIQTKIPNDLPKDSHH--YFVVLG-----------YALSPNGKMQPTMKKRLEIALKAA 218
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ I+++GG P+ + L E+ V L+ G+ + ++LE S +T +NA FS +
Sbjct: 219 KKYPKSKILVAGGVPE-NKLTEATVMQKWLVAHGIAKKRVELEDLSTNTVENALFSVREL 277
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+ + L++SA H++R+ L ++ G AS +
Sbjct: 278 VDRGATSATLITSATHMRRAFLLYRMAGDIVLASNTS 314
>gi|46202066|ref|ZP_00208367.1| COG1434: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 173
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 69/176 (39%), Gaps = 20/176 (11%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ ++LG PS R+ +RL + K +++SGG + H
Sbjct: 11 DAAIILGAMVRPD-------GSPSPALARRVELGVRLARDGKVAH----LLMSGGAVR-H 58
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E+ V L+SG++ D + +E S +T NA S MI+ +++++ A H+
Sbjct: 59 TTPEAHVMRAMALQSGLDPDRLHVEDASRNTIGNALMSRPMIEARGWTRLLIITDACHMA 118
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
R+ F G+ + + + + P + L+E + R R
Sbjct: 119 RALYIFHRLGLKARPAAA-----WPETNPGPEWYM---AWLREAFALPWTVIRVER 166
>gi|119487320|ref|ZP_01621071.1| hypothetical protein L8106_21387 [Lyngbya sp. PCC 8106]
gi|119455875|gb|EAW37010.1| hypothetical protein L8106_21387 [Lyngbya sp. PCC 8106]
Length = 328
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/219 (21%), Positives = 82/219 (37%), Gaps = 20/219 (9%)
Query: 37 GWGIIPTILLKHLQFSY-QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ L L+ + + + IVLLG+GTT P +P + +
Sbjct: 109 SMPFVAQWLAFQLEKTAIETVQTDLCCGERAEAIVLLGSGTT-EPKLPYVTQVQLTRIGD 167
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQK--HGLAESIVYNNKLLESGVERDDIKLETQ 153
RI +LYK + +I+S G + + E+ L+ GV I +T
Sbjct: 168 RIPYAAKLYKD----GLAPLMIVSAGSRNEYLQPVVEADYIARLLVGMGVPSRSILKDTS 223
Query: 154 SLDTFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY------ 206
+ +A + K G+ IILV+S ++R+ L F G + +++
Sbjct: 224 EGTLYDSAVSIQQIAKKQDLGRAIILVTSGLEMRRASLTFASVGFKVIPAPTNFFASLPN 283
Query: 207 -----LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ +P + LT ++EYI + RG
Sbjct: 284 EKYQRRVSAKDFLPSAEALLLTTDVVEEYIITFYYFIRG 322
>gi|93006297|ref|YP_580734.1| hypothetical protein Pcryo_1471 [Psychrobacter cryohalolentis K5]
gi|92393975|gb|ABE75250.1| protein of unknown function DUF218 [Psychrobacter cryohalolentis
K5]
Length = 257
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/217 (19%), Positives = 86/217 (39%), Gaps = 26/217 (11%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ + +L+ + + ++ L + V+LG G T
Sbjct: 34 LLGATTVILVLISLFTPLFSQAVVYILAHLPLPKMPPVAMSSPPTAYVVLGGGLTNDNN- 92
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
+I + S +R Y H + I++SG AE+ L+E G
Sbjct: 93 --NQIILNRYSLNRARAAATAY-----HDLPLPIVLSG--------AEAPWLGQWLIEHG 137
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
++ + E S++T +NA+F++ K + ++ L++ +YH+ R++ F GIN+ A
Sbjct: 138 IDG--LISENASMNTCENARFTA---KRIPLHHVYLITDSYHMARARRQFALNGINSTAI 192
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ L + + N + A+ E + AY R
Sbjct: 193 NAP-LPVIRDWMEPAQNLSHSRRAVYE----VAAYLR 224
>gi|294789429|ref|ZP_06754666.1| putative periplasmic protein [Simonsiella muelleri ATCC 29453]
gi|294482642|gb|EFG30332.1| putative periplasmic protein [Simonsiella muelleri ATCC 29453]
Length = 224
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 73/191 (38%), Gaps = 27/191 (14%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y + + +V+LG A PS RI ++LY+ M
Sbjct: 31 YDYAQHEKPLPQKADAVVVLGA--------AAWGNNPSPVLRERINYGIKLYQQHTVQKM 82
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
I +GG P+ E+ V ++ V + DI L+T+S T++N + +++ N
Sbjct: 83 ----IFTGGTPKFGYPTEAEVAQRYAMQKFNVPQRDIILDTESSSTYENLTNTRTLMHNH 138
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF----YLTELAL 227
++I+VS HL R+ + GI A S P S + + L
Sbjct: 139 HLDSVIIVSDPDHLARAAAMARALGI----------TANVSATPSSLYYGQRKARLKFML 188
Query: 228 KEYIGILIAYY 238
+E + + Y
Sbjct: 189 QETLSLTYFYL 199
>gi|328948744|ref|YP_004366081.1| hypothetical protein Tresu_1898 [Treponema succinifaciens DSM 2489]
gi|328449068|gb|AEB14784.1| protein of unknown function DUF218 [Treponema succinifaciens DSM
2489]
Length = 273
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 81/218 (37%), Gaps = 33/218 (15%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSC--------FMLLFSFIGWGIIPTILLKHLQFSYQRP 56
W+++ V + L RK+ + C +L+F F + + L +
Sbjct: 39 WLWIAVFFVLLFVLERRKVLKIICSRISKRIKIILIFLF-----FAGVFISGLNLFFICN 93
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
K++ +++LG G T + + +R+ + +
Sbjct: 94 PRLSDGKENVRYVIVLGGGITKDAKL-----------TDSVKNRVRVASEYFKAHSAALV 142
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM--------I 168
+++GG + ES V L G++ + I E ++ DT QN FS+ + +
Sbjct: 143 VVTGGKGKFSPCPESDVLKPVLASYGIDENRILAENKAKDTIQNFMFSAKLFAEYDGISM 202
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQHFGI-NTKASCSD 205
+ + + +V+S +H+ R++ G + S
Sbjct: 203 EEVLASPVAVVTSDFHIARAERLASRMGFSDVYGVASK 240
>gi|200389290|ref|ZP_03215902.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199606388|gb|EDZ04933.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 237
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 86/229 (37%), Gaps = 36/229 (15%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + I +I ++ FI I + + ++ G
Sbjct: 31 FMKYRYIIRIAAGIILIMATVFIHNAIA------------IYQFSQQNQTRVADCAIVAG 78
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + PS +R+ + LY+ + ++++GG ++++ +
Sbjct: 79 AGVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAGATVSDAAI 126
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+LE G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q
Sbjct: 127 ARQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQ 186
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
GI++++S + Y S + L+E YY G R
Sbjct: 187 DNGIDSRSSPT-RSTRYKSWWAKTRFL------LRET-----FYYSGYR 223
>gi|161612436|ref|YP_001586401.1| hypothetical protein SPAB_00125 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194469326|ref|ZP_03075310.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197262481|ref|ZP_03162555.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|198242615|ref|YP_002214051.1| hypothetical protein SeD_A0103 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205357053|ref|ZP_02344474.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205357529|ref|ZP_02571064.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205358348|ref|ZP_02655427.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|161361800|gb|ABX65568.1| hypothetical protein SPAB_00125 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194455690|gb|EDX44529.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197240736|gb|EDY23356.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197937131|gb|ACH74464.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205324427|gb|EDZ12266.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205331506|gb|EDZ18270.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205335130|gb|EDZ21894.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|321222331|gb|EFX47403.1| Putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
Length = 237
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 86/229 (37%), Gaps = 36/229 (15%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + I +I ++ FI I + + ++ G
Sbjct: 31 FMKYRYIIRIAAGIILIMATVFIHNAIA------------IYQFSQQNQTRVADCAIVAG 78
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + PS +R+ + LY+ + ++++GG ++++ +
Sbjct: 79 AGVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAGATVSDAAI 126
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+LE G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q
Sbjct: 127 ARQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQ 186
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
GI++++S + Y S + L+E YY G R
Sbjct: 187 DNGIDSRSSPT-RSTRYKSWWAQTRFL------LRET-----FYYSGYR 223
>gi|213418993|ref|ZP_03352059.1| hypothetical protein Salmonentericaenterica_14604 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 184
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 64/172 (37%), Gaps = 14/172 (8%)
Query: 10 VSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ L +K F+S L + + LL+ ++ Y + Q +
Sbjct: 25 IGLALLWFSRFQKTGKVFISVGWLALLLLSLQPVSDHLLRPIENRYP----TWQGPQKVE 80
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T P A S R+ E +RL+++ + +I +GG + +
Sbjct: 81 YIVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRA----NPGARLIFTGGVAKTNT 135
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
++ + V GV R DI + DT + A I +LV
Sbjct: 136 VSTAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAI---GDAPFLLV 184
>gi|291166939|gb|EFE28985.1| membrane protein [Filifactor alocis ATCC 35896]
Length = 198
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 79/213 (37%), Gaps = 35/213 (16%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
F+ +L+F + I IL S + + +++LG
Sbjct: 8 FLKIGLLIFGISFFTIEGAILFSG---------FSTSHDEQIDYVIILGA--------RL 50
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
PS +R+ + S +I++GG E+ + L+ G+
Sbjct: 51 YGTTPSPALTNRLNSALTYLNEHPSTS----VIVTGGQGTDEDCTEAQASYDYLVAHGIA 106
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFGINTKA 201
++ I +ET S TF+N + ++ +I+ +++ ++ +H R++L + G+ +
Sbjct: 107 KNRILMETTSTTTFENIRNATDIIRKQTDNPSVKVLISTNRFHCIRAELLAKRCGLTAYS 166
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
S IP L+EY I+
Sbjct: 167 LPSK--TPPSITIP---------CYLREYFAII 188
>gi|267991770|gb|ACY86655.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
Length = 250
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 86/229 (37%), Gaps = 36/229 (15%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + I +I ++ FI I + + ++ G
Sbjct: 44 FMKYRYIIRIAAGIILIMATVFIHNAIA------------IYQFSQQNQTRVADCAIVAG 91
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + PS +R+ + LY+ + ++++GG ++++ +
Sbjct: 92 AGVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAGATVSDAAI 139
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+LE G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q
Sbjct: 140 ARQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQ 199
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
GI++++S + Y S + L+E YY G R
Sbjct: 200 DNGIDSRSSPT-RSTRYKSWWAQTRFL------LRET-----FYYSGYR 236
>gi|160946740|ref|ZP_02093943.1| hypothetical protein PEPMIC_00699 [Parvimonas micra ATCC 33270]
gi|158447124|gb|EDP24119.1| hypothetical protein PEPMIC_00699 [Parvimonas micra ATCC 33270]
Length = 200
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 85/188 (45%), Gaps = 20/188 (10%)
Query: 32 LFSFIGWGII-PTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
LF FI + + +L++ L + ++ + N +++LG A + S
Sbjct: 4 LFKFIIFLCLCVVVLIQSLIYHSKKNDIDTFE----NYVLVLGA--------KANNGKLS 51
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
+R+ T+ K + ++ GG + L+++ L+E G+ ++ +
Sbjct: 52 KTLINRLDTTVEYLNKHK----NAKAVLCGGKENNNELSQAEYMQRYLIEKGISKERLIA 107
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
ET S +T++N +F+ + + + I+++SS YHL R++L FGI K +
Sbjct: 108 ETNSKNTYENIKFALEKL-DKKPSEIMVISSDYHLFRAKLILYRFGILAKTVPAK--TPT 164
Query: 211 YSIIPLSA 218
+++P A
Sbjct: 165 GAVVPSYA 172
>gi|183602024|ref|ZP_02963393.1| hypothetical protein BIFLAC_07096 [Bifidobacterium animalis subsp.
lactis HN019]
gi|219682933|ref|YP_002469316.1| hypothetical protein BLA_0439 [Bifidobacterium animalis subsp.
lactis AD011]
gi|241190510|ref|YP_002967904.1| hypothetical protein Balac_0463 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241195916|ref|YP_002969471.1| hypothetical protein Balat_0463 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|183218909|gb|EDT89551.1| hypothetical protein BIFLAC_07096 [Bifidobacterium animalis subsp.
lactis HN019]
gi|219620583|gb|ACL28740.1| putative membrane protein [Bifidobacterium animalis subsp. lactis
AD011]
gi|240248902|gb|ACS45842.1| hypothetical protein Balac_0463 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240250470|gb|ACS47409.1| hypothetical protein Balat_0463 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|289178239|gb|ADC85485.1| Transporter [Bifidobacterium animalis subsp. lactis BB-12]
gi|295793497|gb|ADG33032.1| hypothetical protein BalV_0444 [Bifidobacterium animalis subsp.
lactis V9]
Length = 355
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 68/173 (39%), Gaps = 24/173 (13%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
I++LG+G P ++ RI + + + + H +I+SGG +
Sbjct: 180 ILVLGSGLFGETVPPLLQ--------KRIAKGIEIQRQ----DPHARLILSGGQGAGEDV 227
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E + L G + + E +S +T +N FS ++ + GK I VS+ YH+ R+
Sbjct: 228 PEGVAMKAWALAHGADPANTVCEERSRNTRENLLFSRNLFADPNGKTAI-VSTGYHVFRA 286
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
L + +N S + ++ L+E+I + +
Sbjct: 287 LLLSKQLHMNAVGYGS-----------KTPWYFSLNALLREFIAYVSMTRKWQ 328
>gi|195873701|ref|ZP_02698260.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|195632873|gb|EDX51327.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
Length = 237
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 86/229 (37%), Gaps = 36/229 (15%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + I +I ++ FI I + + ++ G
Sbjct: 31 FMKYRYIIRIAAGIILIMATVFIHNAIA------------IYQFSQQNQTRVADCAIVAG 78
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + PS +R+ + LY+ + ++++GG ++++ +
Sbjct: 79 AGVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAGATVSDAAI 126
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+LE G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q
Sbjct: 127 ARQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQ 186
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
GI++++S + Y S + L+E YY G R
Sbjct: 187 DNGIDSRSSPT-RATRYKSWWAQTRFL------LRET-----FYYSGYR 223
>gi|224581941|ref|YP_002635739.1| secreted protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224466468|gb|ACN44298.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 237
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 86/229 (37%), Gaps = 36/229 (15%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + I +I ++ FI I + + ++ G
Sbjct: 31 FMKYRYIIRIAAGIILIMATVFIHNAIA------------IYQFSQQNQTRIADCAIVAG 78
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + PS +R+ + LY+ + ++++GG ++++ +
Sbjct: 79 AGVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAGATVSDAAI 126
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+LE G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q
Sbjct: 127 ARQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQ 186
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
GI++++S + Y S + L+E YY G R
Sbjct: 187 DNGIDSRSSPT-RSTRYKSWWAQTRFL------LRET-----FYYSGYR 223
>gi|291548174|emb|CBL21282.1| Uncharacterized conserved protein [Ruminococcus sp. SR1/5]
Length = 160
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 67/179 (37%), Gaps = 23/179 (12%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
KK+ + I++LG + R+ + + E R + + ++SGG
Sbjct: 4 KKNLDYIIVLGA------HVDGTRMTLA------LLERARRALLYLEENPGTKAVLSGGK 51
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ L G++ D + E +S T +N +FS I ++ +V++
Sbjct: 52 GDGENISEAEAMYRYLTCHGIDGDRLIREEESTSTKENLEFSCRKIGTTDC-SVGVVTNN 110
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+H+ R + G A ++ I + +E + I+ GN
Sbjct: 111 FHVWRGAAIARKCGFREVAMVPSRYRSWRLFIYIP----------REILAIIKDKLMGN 159
>gi|205360555|ref|ZP_02684196.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205348825|gb|EDZ35456.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
Length = 237
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 86/229 (37%), Gaps = 36/229 (15%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + I +I ++ FI I + + ++ G
Sbjct: 31 FMKYRYIIRIAAGIILIMATVFIHNAIA------------IYQFSQQNQTRVADCAIVAG 78
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + PS +R+ + LY+ + ++++GG ++++ +
Sbjct: 79 AGVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAGATVSDAAI 126
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+LE G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q
Sbjct: 127 ARQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILREQQWRTALLVSDPLHMLRLKTIAQ 186
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
GI++++S + Y S + L+E YY G R
Sbjct: 187 DNGIDSRSSPT-RSTRYKSWWAQTRFL------LRET-----FYYSGYR 223
>gi|295398606|ref|ZP_06808637.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
gi|294973146|gb|EFG48942.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
Length = 345
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 78/181 (43%), Gaps = 23/181 (12%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR-LYKSCKQHSMHCTIIISG-GD 122
+ +V+LG + EPS SR+ + + + Q II+SG
Sbjct: 162 QQDFVVILG-------ERLSKNGEPSGVLESRLDMAVDYIERQQFQFQSVPRIIVSGTST 214
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI----KNMQGKNIIL 178
+ ++E+ + + L++ GV + I LE Q+ +T +N ++ ++ K ++ +
Sbjct: 215 GAESQVSEARIMADYLVDHGVPPEMILLEDQAHNTHENFIYAKGIMQANVKQLKTTKAVF 274
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+S+YHL RSQLY G+ + I+ ++E++ I+ +
Sbjct: 275 VTSSYHLYRSQLYANMEGLYQMSGVGAQATMMERIL----------NWVREFVAIIFMHR 324
Query: 239 R 239
+
Sbjct: 325 K 325
>gi|229018413|ref|ZP_04175281.1| hypothetical protein bcere0030_29410 [Bacillus cereus AH1273]
gi|229024642|ref|ZP_04181087.1| hypothetical protein bcere0029_29550 [Bacillus cereus AH1272]
gi|228736707|gb|EEL87257.1| hypothetical protein bcere0029_29550 [Bacillus cereus AH1272]
gi|228742893|gb|EEL93025.1| hypothetical protein bcere0030_29410 [Bacillus cereus AH1273]
Length = 210
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 72/188 (38%), Gaps = 18/188 (9%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +K + F+L+ I + + ++ + ++LG
Sbjct: 5 KKSKKRRILQVFLLMICSI-ILYVSYAAYDIWSYRFKT-----DDGMKTDAGIVLGA--- 55
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ +PS RI + LYK+ II +GG + L E+
Sbjct: 56 -----ASWNGKPSPVFKERINHAISLYKNGNIK----KIIFTGGTKFEAELEEARTARVY 106
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
++ GV+ +DI +ET+SL T N + + + + +VS H+KR+ +H I
Sbjct: 107 AMKHGVKEEDILIETKSLFTEDNLKNAKQVGIENGIRTYTIVSDPLHMKRAMRIAKHIKI 166
Query: 198 NTKASCSD 205
AS +
Sbjct: 167 EAYASPTP 174
>gi|299531045|ref|ZP_07044458.1| hypothetical protein CTS44_09677 [Comamonas testosteroni S44]
gi|298721002|gb|EFI61946.1| hypothetical protein CTS44_09677 [Comamonas testosteroni S44]
Length = 268
Score = 96.5 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 76/217 (35%), Gaps = 34/217 (15%)
Query: 33 FSFIGWGIIPTILLK--HLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+GW ++ L+ L+PQ IV+LG+GT + P
Sbjct: 75 LWSLGWVVLALWLISLFWFWSRLSGLGLAPQQVPPVQSIVVLGSGT--------LDGHPR 126
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG-VERDDIK 149
+R+ + +L K + + GG +E+ V L + + +
Sbjct: 127 PVLAARLEQAAQLAK----LQPQAFVAVCGGVDWGEKESEAEVMARYLQQHHGIAAQRLV 182
Query: 150 LETQSLDTFQNAQFSSSMIKNMQ---GKNIILVSSAYHLKRSQLYFQHFGIN---TKASC 203
LE S T N + S ++ + +VSS +HL R+ + + A+
Sbjct: 183 LEKLSTSTELNLKLSRPLLAERGVAADAPMAMVSSDFHLMRAMDIAKRQDLPQVYPVAAP 242
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ PL+ F L+EY + ++ G
Sbjct: 243 T----------PLATRF---NAWLREYFAMASSWLLG 266
>gi|312138245|ref|YP_004005581.1| integral membrane protein [Rhodococcus equi 103S]
gi|325674847|ref|ZP_08154534.1| hypothetical protein HMPREF0724_12316 [Rhodococcus equi ATCC 33707]
gi|311887584|emb|CBH46896.1| putative integral membrane protein [Rhodococcus equi 103S]
gi|325554433|gb|EGD24108.1| hypothetical protein HMPREF0724_12316 [Rhodococcus equi ATCC 33707]
Length = 220
Score = 96.5 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G T+ + + SR+ + L + II++GG PQ G+
Sbjct: 92 IVVLGAGLYADGTMRPLLV-------SRLQAALALAQRFPLS----PIIVTGGVPQS-GV 139
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ L+ +G+ I E S T +NA ++ ++ ++V+S HL+R+
Sbjct: 140 TEAQAMRQWLVANGIPAFRITEENTSRSTVENAVNTNRILAGRAASGAVVVTSPDHLQRA 199
Query: 189 QLYFQ 193
+ F+
Sbjct: 200 MVDFR 204
>gi|256831370|ref|YP_003160097.1| hypothetical protein Jden_0119 [Jonesia denitrificans DSM 20603]
gi|256684901|gb|ACV07794.1| protein of unknown function DUF218 [Jonesia denitrificans DSM
20603]
Length = 348
Score = 96.5 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/250 (17%), Positives = 87/250 (34%), Gaps = 44/250 (17%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ + V + ++ Q + S L+ + G + +L +++ + ++
Sbjct: 97 IALMCAPVVPFAMISQHSPGRIWAS----LWLVMIIGYLGFAFTCYLAYTFLYAAVPERF 152
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
IV+LG+ P + SR+ + LY + I++SGG
Sbjct: 153 ISS--YIVVLGSELDGDQVTPVL--------ASRLNYAITLYANYSAFHGETAIVVSGGT 202
Query: 122 -----------------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
P +AE+ + L G+ DI +E +L T N S
Sbjct: 203 PEPPTDAPAQSPESAPVAPGPASVAEAHAMRDYLTNHGIPARDIVVEDTALTTEDNLIQS 262
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
++ + +V+S YH+ R+ + G+ + P F L
Sbjct: 263 R-LLIPEPDAPLAVVTSNYHVYRTTTLARQLGVRAHVYGA----------PTPRGF-LAG 310
Query: 225 LALKEYIGIL 234
L+E+ IL
Sbjct: 311 SLLREFAAIL 320
>gi|220908126|ref|YP_002483437.1| hypothetical protein Cyan7425_2730 [Cyanothece sp. PCC 7425]
gi|219864737|gb|ACL45076.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7425]
Length = 279
Score = 96.5 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 83/224 (37%), Gaps = 37/224 (16%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + + + +++ + I L +L S L + IV+LG G
Sbjct: 66 RWKQPLIKGTIALVVLALIATFPPVVTLANYLLVS----PLPQDTGARVDAIVVLGRG-- 119
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
S R L+++ + + +SG ++ +
Sbjct: 120 -------------PISGDRAAVAAELWQAGR----APKVFVSG-------RGDAPYLVKE 155
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L + GV + E S T +NAQF++ +++ ++I+L++ + H+ RS + F+ G
Sbjct: 156 LRKYGVSASALASEDCSQTTEENAQFTARLLQPQGVQHILLITDSPHMLRSWMTFERVGF 215
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ L + S + Y +EY G++ +G
Sbjct: 216 QVIPHG-NALPHWLSHRKHALTVY------REYAGLISYTLQGR 252
>gi|315646581|ref|ZP_07899699.1| hypothetical protein PVOR_14364 [Paenibacillus vortex V453]
gi|315278224|gb|EFU41544.1| hypothetical protein PVOR_14364 [Paenibacillus vortex V453]
Length = 217
Score = 96.5 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 15/141 (10%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
SP K D II LG P +R R+ + + Y + + T I+
Sbjct: 51 SPAEKADVGII--LGASMWGDQPSPGLR--------ERLEQALVEYNAGRFD----TFIV 96
Query: 119 SGG-DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
SGG D + E+ N L+E+GV + I LE ++ T++N +S +++N K I
Sbjct: 97 SGGLDKPGYTYTEAEGMRNFLVEAGVPEERIYLENEATSTYENLLYSQDIMENNGWKTAI 156
Query: 178 LVSSAYHLKRSQLYFQHFGIN 198
+++ YH RS G +
Sbjct: 157 IITHDYHGTRSMEVATTLGYD 177
>gi|301383268|ref|ZP_07231686.1| hypothetical protein PsyrptM_11552 [Pseudomonas syringae pv. tomato
Max13]
gi|302062492|ref|ZP_07254033.1| hypothetical protein PsyrptK_21113 [Pseudomonas syringae pv. tomato
K40]
gi|302133475|ref|ZP_07259465.1| hypothetical protein PsyrptN_18884 [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 189
Score = 96.5 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 74/180 (41%), Gaps = 23/180 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ + ++LG+ T PS + +R+ + LY+ + + II+S
Sbjct: 28 SDNAQTSDAAIVLGSKVTPD-------GVPSARLQARLDRAVELYRQGRVRN----IIVS 76
Query: 120 GGDPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GG G +E++ N L E + R+ I L+ Q T A+ S+ ++K K+ ++
Sbjct: 77 GGTGV-EGFSEAVGMANYLAERSGLPREAILLDEQGNTTKDTARNSAQIMKQRGFKSAVV 135
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+ +H+ RS+ G+ ++ + + L+ +E + ++
Sbjct: 136 VTQYFHITRSRYALYQAGVTQVSTAHARYFEWRDLYSLA----------REVAALPAYWW 185
>gi|213966760|ref|ZP_03394911.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|213928610|gb|EEB62154.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 166
Score = 96.5 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 74/180 (41%), Gaps = 23/180 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ + ++LG+ T PS + +R+ + LY+ + + II+S
Sbjct: 5 SDNAQTSDAAIVLGSKVTPD-------GVPSARLQARLDRAVELYRQGRVRN----IIVS 53
Query: 120 GGDPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GG G +E++ N L E + R+ I L+ Q T A+ S+ ++K K+ ++
Sbjct: 54 GGTGV-EGFSEAVGMANYLAERSGLPREAILLDEQGNTTKDTARNSAQIMKQRGFKSAVV 112
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+ +H+ RS+ G+ ++ + + L+ +E + ++
Sbjct: 113 VTQYFHITRSRYALYQAGVTQVSTAHARYFEWRDLYSLA----------REVAALPAYWW 162
>gi|194446096|ref|YP_002039329.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194404759|gb|ACF64981.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 206
Score = 96.5 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 36/228 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + I +I ++ FI I + + ++ G
Sbjct: 1 MKYRYITRIAAGIILIMATVFIHNAIA------------IYQFSQQNQTRVADCAIVAGA 48
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + PS +R+ + LY+ + ++++GG ++++ +
Sbjct: 49 GVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAGATVSDAAIA 96
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+LE G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q
Sbjct: 97 RQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQD 156
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
GI++++S + Y S + L+E YY G R
Sbjct: 157 NGIDSRSSPT-RSTRYKSWWAQTRFL------LRET-----FYYSGYR 192
>gi|108763026|ref|YP_634765.1| hypothetical protein MXAN_6648 [Myxococcus xanthus DK 1622]
gi|108466906|gb|ABF92091.1| hypothetical protein MXAN_6648 [Myxococcus xanthus DK 1622]
Length = 292
Score = 96.1 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 60/144 (41%), Gaps = 12/144 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ +++V+LG PS +R + LY + ++ SG
Sbjct: 121 EQAAPADVLVVLGA-------RVLPGGVPSGALRARTEHAVALYH----RGVAPRLVFSG 169
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + +E+ GV + LE S T NA+ ++ +++ + + +++VS
Sbjct: 170 GVGV-NPPSEARAMLALATRMGVPAEACVLEEGSHSTDDNARLTAEVLRGLGARRVVVVS 228
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
YHL R++ YF+ +G S +
Sbjct: 229 DPYHLLRARNYFRLYGWEVATSPA 252
>gi|28198681|ref|NP_778995.1| hypothetical protein PD0776 [Xylella fastidiosa Temecula1]
gi|28056772|gb|AAO28644.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|307579820|gb|ADN63789.1| hypothetical protein XFLM_09510 [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 202
Score = 96.1 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 75/208 (36%), Gaps = 27/208 (12%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
C +++ F + ++ Q ++I++LG A
Sbjct: 13 WICVLVVLVFFWLVAVAGWIVWIGQR---------DQAASSDVIIVLGA--------AAY 55
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL-AESIVYNNKLLESGVE 144
+PS RI + LY+ H T+I +GG AES V L V
Sbjct: 56 DAKPSPVFEERIRHGLYLYQ----HGYAPTLIFTGGFGGSSARFAESQVARRYALRYDVP 111
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
I +ET S T QN + +++ + I+VS H+ R+ + I+ AS +
Sbjct: 112 SRAILIETVSRTTRQNLIQARQLMRVYGLRRAIVVSDPLHMARALRLCRELDIDALASAT 171
Query: 205 D-----YLNAYYSIIPLSANFYLTELAL 227
L+ + + F+ +L +
Sbjct: 172 PSTRFRSLHTRWRFLLQEVYFFHRDLVI 199
>gi|229161985|ref|ZP_04289961.1| hypothetical protein bcere0009_27680 [Bacillus cereus R309803]
gi|228621466|gb|EEK78316.1| hypothetical protein bcere0009_27680 [Bacillus cereus R309803]
Length = 219
Score = 96.1 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/178 (22%), Positives = 70/178 (39%), Gaps = 15/178 (8%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
F + I I+ + +SY+ + ++LG +
Sbjct: 21 IFQVFLLMICSAILYVSYAAYDIWSYR---FKTNDGVKTDAGIVLGA--------ASWNG 69
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+PS RI + LYK+ II +GG + L ES ++ GV+ +D
Sbjct: 70 KPSPVFKERINHAISLYKNGDIK----KIIFTGGTKFEAELEESRTARVYAMKQGVKDED 125
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I +ET+SL T +N + + + + +VS H+KR+ +H I AS +
Sbjct: 126 ILIETKSLFTEENLKNAKEVGIENGIRTYTIVSDPLHMKRAMRIAKHINIEAYASPTP 183
>gi|238911156|ref|ZP_04654993.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
Length = 206
Score = 96.1 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 36/228 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + I +I ++ FI I + + ++ G
Sbjct: 1 MKYRYIIRIAAGIILIMATVFIHNAIA------------IYQFSQQNQTRVADCAIVAGA 48
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + PS +R+ + LY+ + ++++GG ++++ +
Sbjct: 49 GVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAGATVSDAAIA 96
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+LE G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q
Sbjct: 97 RQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQD 156
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
GI++++S + Y S + L+E YY G R
Sbjct: 157 NGIDSRSSPT-RSTCYKSWWAKTRFL------LRET-----FYYSGYR 192
>gi|194448844|ref|YP_002044067.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205359241|ref|ZP_02668425.2| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194407148|gb|ACF67367.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205337510|gb|EDZ24274.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 249
Score = 96.1 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 86/229 (37%), Gaps = 36/229 (15%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + I +I ++ FI I + + ++ G
Sbjct: 43 FMKYRYIIRIAAGIILIMATVFIHNAIA------------IYQFSQQNQTRVADCAIVAG 90
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + PS +R+ + LY+ + ++++GG ++++ +
Sbjct: 91 AGVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAGATVSDAAI 138
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+LE G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q
Sbjct: 139 ARQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQ 198
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
GI++++S + Y S + L+E YY G R
Sbjct: 199 DNGIDSRSSPT-RSTRYKSWWAQTRFL------LRET-----FYYSGYR 235
>gi|300172540|ref|YP_003771705.1| membrane protein [Leuconostoc gasicomitatum LMG 18811]
gi|299886918|emb|CBL90886.1| membrane protein, putative [Leuconostoc gasicomitatum LMG 18811]
Length = 316
Score = 96.1 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 47/253 (18%), Positives = 91/253 (35%), Gaps = 40/253 (15%)
Query: 2 LLSWIFLIVSY----WHLLCQSIRKIFFMSCFMLLFSF----IGWGIIPTILLKHLQFSY 53
+ I L++S W Q + M L F + W P L+ + + +
Sbjct: 67 VFFGILLLLSMVRHSWKKSHQWGLPLLVGVYLMCLLLFSQWSLWWLSAP-WLMLYFVWQF 125
Query: 54 QRPLLSP------QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSC 107
R ++S +V+LG G A RI +
Sbjct: 126 CRFIVSSVIYGYQSKAPTRGPLVVLGGGL-------AEGYRVGNIVDKRIQAAVTDANKM 178
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSS 166
++ M I+ SGG + ++E+ + + V + +LE +S +T+QN +++S
Sbjct: 179 SEYPM---IVFSGGQGEDQLISEAEAMRDWSVSRYDVPFEKTQLEKRSRNTYQNLKYTSQ 235
Query: 167 MIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
++ + +S YH+ R L + I+ + +PL FY
Sbjct: 236 LLSQ---QPFTFYTSGYHVFRGVLLAKKQNIDAQG--------RGGFVPL---FYRIPAF 281
Query: 227 LKEYIGILIAYYR 239
+E+ G++ R
Sbjct: 282 FREFAGVMSMNIR 294
>gi|322435976|ref|YP_004218188.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
gi|321163703|gb|ADW69408.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
Length = 218
Score = 96.1 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 80/218 (36%), Gaps = 27/218 (12%)
Query: 22 KIFFMSCF-MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ F + CF L+ + +GW + +++ + + + + + I + G
Sbjct: 23 RRFLLWCFCFLVLAAMGW---SSWVVRQINL-----VAAQDQAQPADAIAVFGA------ 68
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
PS ++R+ + LY+ I GG + G E V + LL
Sbjct: 69 --AEYSGRPSPVYHARLDHAVTLYRKQIAP---IVITFGGGSDKDSGKTEGGVGRDYLLA 123
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+G+ D I ET S+DT Q + + + + +I+LVS HL R Q + G++
Sbjct: 124 NGIPFDKIIAETHSVDTEQQVELLAQIAEENNLSHIVLVSDNTHLFRIQELCRRAGLDVY 183
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S L S + L E +
Sbjct: 184 TSPRPALGHIDS-------YDLFMRYFHEVLSYTAMRL 214
>gi|16763488|ref|NP_459103.1| secreted protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|205351438|ref|YP_002225239.1| secreted protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207855611|ref|YP_002242262.1| hypothetical protein SEN0100 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|16418596|gb|AAL19062.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|205271219|emb|CAR36007.1| probable secreted protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206707414|emb|CAR31687.1| probable secreted protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261245331|emb|CBG23119.1| probable secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|301156727|emb|CBW16201.1| probable secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911068|dbj|BAJ35042.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|323128416|gb|ADX15846.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326621795|gb|EGE28140.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326626461|gb|EGE32804.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332987050|gb|AEF06033.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 206
Score = 95.7 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 36/228 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + I +I ++ FI I + + ++ G
Sbjct: 1 MKYRYIIRIAAGIILIMATVFIHNAIA------------IYQFSQQNQTRVADCAIVAGA 48
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + PS +R+ + LY+ + ++++GG ++++ +
Sbjct: 49 GVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAGATVSDAAIA 96
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+LE G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q
Sbjct: 97 RQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQD 156
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
GI++++S + Y S + L+E YY G R
Sbjct: 157 NGIDSRSSPT-RSTRYKSWWAQTRFL------LRET-----FYYSGYR 192
>gi|62178663|ref|YP_215080.1| hypothetical protein SC0093 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62126296|gb|AAX63999.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322713116|gb|EFZ04687.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 206
Score = 95.7 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 36/228 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + I +I ++ FI I + + ++ G
Sbjct: 1 MKYRYIIRIAAGIILIMATVFIHNAIA------------IYQFSQQNQTRIADCAIVAGA 48
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + PS +R+ + LY+ + ++++GG ++++ +
Sbjct: 49 GVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAGATVSDAAIA 96
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+LE G+ I +E +S T +N +++ +++ Q + +LVS H+ R + Q
Sbjct: 97 RQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQD 156
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
GI++++S + Y S + L+E YY G R
Sbjct: 157 NGIDSRSSPT-RSTRYKSWWAQTRFL------LRET-----FYYSGYR 192
>gi|266620475|ref|ZP_06113410.1| putative SanA protein [Clostridium hathewayi DSM 13479]
gi|288867927|gb|EFD00226.1| putative SanA protein [Clostridium hathewayi DSM 13479]
Length = 249
Score = 95.7 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 74/192 (38%), Gaps = 17/192 (8%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ I++ F + + + + + T ++K + + + I++LG G
Sbjct: 29 KKLIKRAFVVLVILGVAGIVCLAAVNTYMIKSTEKRILTWKEASSLG--ADCILVLGAGV 86
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+PS R+ + LY++ +++SG D + E
Sbjct: 87 HPD-------GKPSNMLEDRLLRGIELYEAGASE----KLLMSG-DHGRKNYDEVNAMKQ 134
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
++ GV +D+ ++ T+++ + + + + II+V+ YHL R+ + G
Sbjct: 135 FAVDRGVPSEDVFMDHAGFSTYESMYRARDVFEA---EKIIIVTQQYHLYRALYAAKQLG 191
Query: 197 INTKASCSDYLN 208
++ SD
Sbjct: 192 LDAYGVASDQRT 203
>gi|15838692|ref|NP_299380.1| hypothetical protein XF2101 [Xylella fastidiosa 9a5c]
gi|9107229|gb|AAF84900.1|AE004026_1 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 202
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 18/173 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++I++LG A +PS RI + LY+ H T+I +G
Sbjct: 39 DQAASSDVIIVLGA--------AAYDAKPSPVFEERIRHGLYLYQ----HGYAPTLIFTG 86
Query: 121 GDPQKHGL-AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G AES V L V I +ET S T QN + +++ + I+V
Sbjct: 87 GFGGSSARFAESQVARRYALRYDVPPRAILIETVSRTTRQNLIQARQLMRVYGLRRAIVV 146
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSD-----YLNAYYSIIPLSANFYLTELAL 227
S H+ R+ + I+ AS + L+ + + F+ +L +
Sbjct: 147 SDPLHMARALRLCRELDIDALASATPSTRFRSLHTRWRFLLQEVYFFHRDLVI 199
>gi|291296072|ref|YP_003507470.1| hypothetical protein Mrub_1689 [Meiothermus ruber DSM 1279]
gi|290471031|gb|ADD28450.1| protein of unknown function DUF218 [Meiothermus ruber DSM 1279]
Length = 176
Score = 95.3 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 15/153 (9%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ P SP + + IV+LG EPS +R+ +RLY+
Sbjct: 16 FFSPKASPGTLQKADWIVVLGA--------AQYNGEPSVIFRNRLEAALRLYQQ----GY 63
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
I ++GG +E V + L GV + E QS T +N + ++
Sbjct: 64 APRIAVTGGRAPGDRYSEGGVGCSYLEAKGVPPAALYCEQQSRRTVENLTNIAPVV---G 120
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+I+V+ HL R+ + + G+
Sbjct: 121 KSRLIIVTDEPHLPRALILAEQLGLQATGFAVH 153
>gi|225568744|ref|ZP_03777769.1| hypothetical protein CLOHYLEM_04823 [Clostridium hylemonae DSM
15053]
gi|225162243|gb|EEG74862.1| hypothetical protein CLOHYLEM_04823 [Clostridium hylemonae DSM
15053]
Length = 201
Score = 95.3 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 84/214 (39%), Gaps = 29/214 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG-NIIVLLGN 74
L ++ + + +F + I + ++RP +WKK + V+ G
Sbjct: 3 LYKAKKTAGILGRLTAVFLLLNICIFTAV--------FRRPKR--RWKKHTYDCAVVCGY 52
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
PS +R+ + L + K + +++SGG + E+ V
Sbjct: 53 -------YAEEDGSPSPFMRTRVEKGAGLLREGKVKA----LLLSGGAVS-NSHVEAEVM 100
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ L+ GV D I E +S+ T+ N ++S +++ K+ ++V++ +HL+++ Y
Sbjct: 101 RDHALKLGVPADVIYTEPRSVSTYHNMKYSKALMSENGLKDCVVVTNGWHLRKADHYAGK 160
Query: 195 FGINTK------ASCSDYLNAYYSIIPLSANFYL 222
F ++ + + I N Y
Sbjct: 161 FRMDHVMCRADDPTGQTWRTKIMLYIKTWWNMYR 194
>gi|319950302|ref|ZP_08024221.1| integral membrane protein [Dietzia cinnamea P4]
gi|319435994|gb|EFV91195.1| integral membrane protein [Dietzia cinnamea P4]
Length = 210
Score = 95.3 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG G P I P + R+ RL + II++GG PQ +G
Sbjct: 82 IVILGAGL-----FPDGGIRPVLE--ERLRTGYRLAQEYPT----ARIIVTGGVPQ-NGR 129
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ + L +G+ I E S T QNAQF+ + ++ ++V++ H+KR+
Sbjct: 130 TEARAMGDWLRGAGISPLRITEEGSSNSTVQNAQFTDRIFRDRGTTGAVVVTTGDHVKRA 189
Query: 189 QLYFQHF 195
L F+
Sbjct: 190 VLNFRQA 196
>gi|224283840|ref|ZP_03647162.1| hypothetical protein BbifN4_08441 [Bifidobacterium bifidum NCIMB
41171]
gi|313140995|ref|ZP_07803188.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
gi|313133505|gb|EFR51122.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
Length = 145
Score = 95.3 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 12/103 (11%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG- 173
+ SGG ++E+ L E V D + +E +S T +N +FS ++ G
Sbjct: 11 FVASGGQGSDEVVSEAESMRRYLTESRHVPADAVLMEDRSTTTMENLRFSKEIMDARSGV 70
Query: 174 ----------KNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
LV+S YH+ R+ Y H G Y
Sbjct: 71 QSVPGRRGLAYRCALVTSDYHVFRASEYAHHIGPKADGVRQPY 113
>gi|319442862|ref|ZP_07992018.1| hypothetical protein CvarD4_13984 [Corynebacterium variabile DSM
44702]
Length = 341
Score = 95.3 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 81/226 (35%), Gaps = 26/226 (11%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
F + + + + W ++++L + + + +++LG G
Sbjct: 132 FSLVIIGVAALVLWVCAVVSMIRYL--RDVGRGRRRRAPERADAVIVLGAGLVHD----- 184
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIISGGDPQKHGLAESIVYNNKLLESG 142
S R + S +H +I++GG E+ + L G
Sbjct: 185 ---RVSDLLACRCDRGAAAWHSVTEHRPARSTPLIVTGGRGDDEPCTEAEAMHRYLASRG 241
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKR-----SQLYFQHF 195
R + E + DT +N FS ++K + ++++ +S +H+ R + L +
Sbjct: 242 FPRGAVLEERYATDTTENLHFSLDLLKERGVRDPHVVVCTSDFHVLRTERIVAALEAER- 300
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
G N + L A + A++ L+EY+ + I G
Sbjct: 301 GDNGVPFSAVVLGAPTPKPAIPASY------LREYVALTIHRIIGR 340
>gi|226327284|ref|ZP_03802802.1| hypothetical protein PROPEN_01151 [Proteus penneri ATCC 35198]
gi|225204502|gb|EEG86856.1| hypothetical protein PROPEN_01151 [Proteus penneri ATCC 35198]
Length = 379
Score = 95.3 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
L KD N IV LG T+ I R+ +T+ + K
Sbjct: 194 PADLAKLNKTKDNNAIVTLGYALNPDGTMNKI-------LIERLNKTLEVAKQL----PD 242
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
I+++GG P+ H E + + L+++G+ + I E + T +NA FS + +
Sbjct: 243 AMIVVTGGVPKAH-QTEGKLMADWLVKNGIAPERIFQENYARTTVENALFSRYALTKHRI 301
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
K +++SS H++R+ F + S YL PL+
Sbjct: 302 KTAVIISSGSHVRRADAIFTIASWQSGPSDISYLTVVAPDKPLAE 346
>gi|291295513|ref|YP_003506911.1| hypothetical protein Mrub_1127 [Meiothermus ruber DSM 1279]
gi|290470472|gb|ADD27891.1| protein of unknown function DUF218 [Meiothermus ruber DSM 1279]
Length = 252
Score = 95.3 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 78/206 (37%), Gaps = 7/206 (3%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ ++ ++ L + L+ + + ++IV+LG G E S +
Sbjct: 51 LCALLVAAVVFTPLTRTLAEGLIVNEAPQKADLIVVLGGGMHCGAG------ELEASSLA 104
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD-DIKLETQS 154
R+ + + L+++ + + + + V ++ + +I Q
Sbjct: 105 RLEKGLELWRAGYAPRITLSDTVGEIFGDARCPSLGRVAAQRVQALYGDEGPEILFLPQM 164
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
T A + +++ + ++LV++ H +R+ F+ G+ + S ++
Sbjct: 165 RTTRTEALAVAELVQARGWQRVLLVTTPAHSRRAAGAFRKLGLEVLSVNSSEPRFDRALA 224
Query: 215 PLSANFYLTELALKEYIGILIAYYRG 240
+ ++EY+G+L+ RG
Sbjct: 225 APADRLQALTPLVREYLGLLVYRLRG 250
>gi|319936939|ref|ZP_08011349.1| exported protein [Coprobacillus sp. 29_1]
gi|319807875|gb|EFW04454.1| exported protein [Coprobacillus sp. 29_1]
Length = 219
Score = 94.9 bits (235), Expect = 8e-18, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 16/145 (11%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+D + I++LG G P + R+ ++LYK K II+SG D
Sbjct: 42 EDADCILVLGAGVRNNKPTPMLN--------DRLEVAIQLYKDGK----ASKIIMSG-DH 88
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ E + +E+GV I ++ T+++ + + K K +I+V+ Y
Sbjct: 89 GQEDYNEVGIMKTFAIENGVPSSAIFMDHAGFSTYESLYRAKEIFKA---KKVIIVTQDY 145
Query: 184 HLKRSQLYFQHFGINTKASCSDYLN 208
HL R+ GI ++ +
Sbjct: 146 HLYRALYIGNQLGIEAVGVPANPRS 170
>gi|153812550|ref|ZP_01965218.1| hypothetical protein RUMOBE_02949 [Ruminococcus obeum ATCC 29174]
gi|149831475|gb|EDM86563.1| hypothetical protein RUMOBE_02949 [Ruminococcus obeum ATCC 29174]
Length = 160
Score = 94.9 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 71/182 (39%), Gaps = 25/182 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ +++ + I++LG + R+ + + E R + + ++SG
Sbjct: 2 KARENLDYIIVLGA------HVDGTRMTLA------LLERTRRALLYLEENPGTRAVLSG 49
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++E+ L E G++ + E +S +T +N +S +I + + I +V+
Sbjct: 50 GMGDGERISEAEAMYRYLTEHGIDGGRLIREERSTNTKENLDYSLELIGSTEPA-IGVVT 108
Query: 181 SAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +H+ R + + G S Y + Y+ +E + I+
Sbjct: 109 NNFHVFRGVMIGRKCGCREIYPVPSRYRSWRLL-------LYIP----REILAIIKDKIV 157
Query: 240 GN 241
GN
Sbjct: 158 GN 159
>gi|114320844|ref|YP_742527.1| hypothetical protein Mlg_1691 [Alkalilimnicola ehrlichii MLHE-1]
gi|114227238|gb|ABI57037.1| protein of unknown function DUF218 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 204
Score = 94.9 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 67/163 (41%), Gaps = 14/163 (8%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ V+LG A PS RI + LY++ + +I +GG
Sbjct: 30 ADAAVILGA--------AAWNGRPSPVLRERIHHALSLYEAGQVD----LLIFTGGQAPG 77
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
LAES+ L G+ +D E S DT+ N + +++++ +++VS HL
Sbjct: 78 EPLAESVAAARYALARGLAAEDAYCEVASADTWNNLRGAAAVVAEHDLGRVLVVSDPLHL 137
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
+R+ + G++ + + + + + NF E+ L
Sbjct: 138 RRAVAMARDLGLDAHPAPTP--TSRFRGLEAKRNFLWAEVRLY 178
>gi|257067909|ref|YP_003154164.1| hypothetical protein Bfae_07170 [Brachybacterium faecium DSM 4810]
gi|256558727|gb|ACU84574.1| uncharacterized conserved protein [Brachybacterium faecium DSM
4810]
Length = 338
Score = 94.9 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 43/241 (17%), Positives = 83/241 (34%), Gaps = 24/241 (9%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
++ + L+ + L + L + I + L+ L S L Q
Sbjct: 98 IAGLALLAAPIVSLALARTLTPAGLGIGALLALIALHVGIAFLV-FLCASVPYQLFPKQL 156
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
G I++ G+G +R R+ + + + + ++ SGG
Sbjct: 157 STTG--IIVHGSGLIRGQVTKLLR--------GRLDRAVAERERLLRLGIDPLLVPSGGR 206
Query: 123 PQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV-S 180
+ +E L E G+ + I ET S T +N S ++ +V +
Sbjct: 207 GEDEPRSEGSAMAEYLQEEAGIPAERIHAETASRTTEENLTLSHRILDEAGHHGPYVVST 266
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
S YH R+ L + G + +A +A +Y+ L+E+I ++
Sbjct: 267 SRYHAFRAALLARGLGYDDEAIGGP-----------TAFYYVPSATLREFIAVMSYRKVW 315
Query: 241 N 241
N
Sbjct: 316 N 316
>gi|229012351|ref|ZP_04169528.1| hypothetical protein bmyco0001_27960 [Bacillus mycoides DSM 2048]
gi|228748987|gb|EEL98835.1| hypothetical protein bmyco0001_27960 [Bacillus mycoides DSM 2048]
Length = 210
Score = 94.9 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 12/148 (8%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
+ ++LG + +PS RI + LYK+ II
Sbjct: 39 FKTDDGVKTDAGIVLGA--------ASWNGKPSPVFKERINHAISLYKNGNIK----KII 86
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+GG + L E+ L+ GV+ +DI +ET+SL T N + + + +
Sbjct: 87 FTGGTKFEAELEEARTARVYALKHGVKEEDILIETKSLFTEDNLKNAKQVGIENGIRTYT 146
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSD 205
+VS H+KR+ +H I AS +
Sbjct: 147 IVSDPLHMKRAMKIAKHIKIEAYASPTP 174
>gi|261406200|ref|YP_003242441.1| hypothetical protein GYMC10_2356 [Paenibacillus sp. Y412MC10]
gi|261282663|gb|ACX64634.1| protein of unknown function DUF218 [Paenibacillus sp. Y412MC10]
Length = 217
Score = 94.9 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 59/134 (44%), Gaps = 13/134 (9%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ + ++ ++LG P +R R+ + Y + + T I++
Sbjct: 50 SRPAEKADVGIILGASMWGDQPSPGLR--------ERLEHALVEYNAGRFD----TFIVT 97
Query: 120 GG-DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GG D ++ E+ N L+E+GV + I LE ++ T++N +S ++++ I+
Sbjct: 98 GGLDKPEYNYTEAEGMRNFLVEAGVPEERIFLENEATSTYENLLYSQAIMEEHGWNTAII 157
Query: 179 VSSAYHLKRSQLYF 192
V+ YH R+
Sbjct: 158 VTHDYHGTRAMEVA 171
>gi|330814246|ref|YP_004358485.1| protein of unknown function DUF218 [Candidatus Pelagibacter sp.
IMCC9063]
gi|327487341|gb|AEA81746.1| protein of unknown function DUF218 [Candidatus Pelagibacter sp.
IMCC9063]
Length = 247
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGG----DPQKHGLAESIVYNNKLLESGVERDDI 148
S RI + + + + + I+ S G D + ES + S +E+ DI
Sbjct: 90 SRERIVQAINIKNNYLPKKVQ--ILYSSGNTSLDTKNKENPESEFVQTIISNSNIEKKDI 147
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY-- 206
+ +T +N + + N + K ++LV+SA+H+KRS + + + I + S +
Sbjct: 148 IFLPSARNTIENFKQLKFFLTNKKNKKVLLVTSAFHMKRSLMIAKKYDIKIQGFPSFFYI 207
Query: 207 ------LNAYYSIIPLSANFYLTELALKEYIGIL 234
L Y + + N Y ++ +E +GI
Sbjct: 208 SSDYSSLINSYQNLRIQNNLYYFDIFFRELVGIF 241
>gi|168234855|ref|ZP_02659913.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194734850|ref|YP_002113116.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|194710352|gb|ACF89573.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197291873|gb|EDY31223.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 206
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ ++ G G + PS +R+ + LY+ + ++++GG
Sbjct: 40 ADCAIVAGAGVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAG 87
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
++++ + +LE G+ I +E +S T +N +++ + + Q + +LVS H+
Sbjct: 88 ATVSDAAIARQYVLEKGIPAKAIFIEERSTVTRENIRYAKQIQRQQQWRTALLVSDPLHM 147
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
R + Q GI++++S + Y S + L+E YY G R
Sbjct: 148 LRLKTIAQDNGIDSRSSPT-RSTRYKSWWAKTRFL------LRET-----FYYSGYR 192
>gi|71065507|ref|YP_264234.1| hypothetical protein Psyc_0947 [Psychrobacter arcticus 273-4]
gi|71038492|gb|AAZ18800.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 265
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 92/226 (40%), Gaps = 28/226 (12%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIG-WGIIPTILLKHLQFSYQRPLLSPQ-WKKDGNIIVLLG 73
L + I F + ++ I + + + + ++ P + P ++LG
Sbjct: 33 LFRIINATFMLGATTVILVLISLFTPLFSQAVVYILTHLPLPKMPPAAMSSPPTAYLVLG 92
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G T +I + S +R Y H + I++SG AE+
Sbjct: 93 GGLTND---NHNQIILNRYSLNRARTAATAY-----HDLPLPIVLSG--------AEAPW 136
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L+E G++ + E S++T +NA+F++ K + ++ L++ +YH+ R++ F
Sbjct: 137 LGQWLIEHGIDG--LISENASMNTCENARFTA---KRIPLHHVYLITDSYHMARARRQFA 191
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
GIN+ A + L + + N + A+ E + AY R
Sbjct: 192 LNGINSTAINAP-LPVRRDWMEPAQNLSHSRRAVYE----VAAYLR 232
>gi|289811795|ref|ZP_06542424.1| hypothetical protein Salmonellaentericaenterica_48822 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 177
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 61/162 (37%), Gaps = 11/162 (6%)
Query: 10 VSYWHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ L +K F+S L + + LL+ ++ Y + Q +
Sbjct: 25 IGLALLWFSRFQKTGKVFISVGWLALLLLSLQPVSDHLLRPIENRYP----TWQGPQKVE 80
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG G T P A S R+ E +RL+++ + +I +GG + +
Sbjct: 81 YIVVLGGGYTWNP-QWAPSSNLINNSLPRLAEGIRLWRA----NPGARLIFTGGVAKTNT 135
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
++ + V GV R DI + DT + A I
Sbjct: 136 VSTAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAIG 177
>gi|262195869|ref|YP_003267078.1| hypothetical protein Hoch_2653 [Haliangium ochraceum DSM 14365]
gi|262079216|gb|ACY15185.1| protein of unknown function DUF218 [Haliangium ochraceum DSM 14365]
Length = 199
Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P + + IV+LG P + R+ S R+ + LY+ + ++
Sbjct: 31 PDAIEPADAIVVLGA-----PVLAPGRL--SEVGRERVDAAVSLYQ----RGAGPRLCVT 79
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG P G E+ G+ + +++E Q+ +T +NA+F+++M++ +++ LV
Sbjct: 80 GGGPA--GRVEADAMAAHARARGLPEEALRIERQARNTEENARFAAAMLRAEGCRSVWLV 137
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
S +HL R+ ++F+ G+ + + P S F A+K
Sbjct: 138 SQPFHLARACVWFRRCGLEARPWHA----------PDSVQFREPRRAIK 176
>gi|255263139|ref|ZP_05342481.1| periplasmic protein [Thalassiobium sp. R2A62]
gi|255105474|gb|EET48148.1| periplasmic protein [Thalassiobium sp. R2A62]
Length = 153
Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 57/151 (37%), Gaps = 16/151 (10%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS R LY + K II GG KH +E+ + L G+ DI
Sbjct: 16 PSPTLKRRTLHGAALYHAGKID----RIICCGGLG-KHPPSEAEAMAHLLQNEGIPTADI 70
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
LE QS T +N + ++ ++ +++ YH R+ L + G+ S
Sbjct: 71 ILEDQSTTTGENIANALPLLD---TSSVTIITDWYHAPRACLVARRAGLKATGSAPSLRG 127
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A I P + L+E+ ++ R
Sbjct: 128 A--RIWPQTK------ATLREFPAYVVYLLR 150
>gi|66803372|ref|XP_635529.1| hypothetical protein DDB_G0290785 [Dictyostelium discoideum AX4]
gi|60463854|gb|EAL62026.1| hypothetical protein DDB_G0290785 [Dictyostelium discoideum AX4]
Length = 516
Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 14/133 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ-HSMHCTIIISG------ 120
IV+LG P+ R+ Y +I+SG
Sbjct: 101 AIVVLGYSLHSD-------GMPTQILKERVVLACEYYTKLNDVEGGKTKLILSGKGKEEQ 153
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
DP K +E+ N L++ V DI +E S +T +NA+F+ + ++ + + + +V+
Sbjct: 154 SDPDKAFNSEAEAMNEIALQNDVSPFDILIENNSSNTAENARFTLNYLQKIGVQRLFIVT 213
Query: 181 SAYHLKRSQLYFQ 193
S +H+ RSQ FQ
Sbjct: 214 SDFHVLRSQYIFQ 226
>gi|317490841|ref|ZP_07949277.1| hypothetical protein HMPREF0864_00039 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920388|gb|EFV41711.1| hypothetical protein HMPREF0864_00039 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 182
Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q ++ + ++LG G EPS R+ ++ LY+ II++G
Sbjct: 19 QDVRNADCAIVLGAGVKN--------GEPSPVFQERLNHSVYLYQ----KGYVGIIILTG 66
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G ++++ + LL G+ +I LE QS T +N ++ ++ Q N +++S
Sbjct: 67 GYSIGSHVSDAKIAKRYLLAKGIPEMNIFLEEQSTVTRENLSYAKDVMNLHQLHNALIIS 126
Query: 181 SAYHLKRSQLYFQHFGINTKASCSD 205
H+KR+ L + GI +S +
Sbjct: 127 DPLHMKRAILIAKDNGIKAWSSPTP 151
>gi|28871767|ref|NP_794386.1| hypothetical protein PSPTO_4635 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28855019|gb|AAO58081.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 189
Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 75/180 (41%), Gaps = 23/180 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
K ++ ++LG+ T PS + +R+ + LY+ + + II+S
Sbjct: 28 SDTAKTSDVAIVLGSKVTPD-------GVPSARLQARLDRAVELYRQGRVRN----IIVS 76
Query: 120 GGDPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GG G +E++ N L E + R+ I L+ Q T A+ S+ ++K K+ ++
Sbjct: 77 GGTGV-EGFSEAVGMANYLAERSGLPREAILLDEQGNTTKDTARNSAQIMKQRGFKSAVV 135
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+ +H+ RS+ G+ ++ + + L+ +E + ++
Sbjct: 136 VTQYFHITRSRYALYQAGVTQVSTAHARYFEWRDLYSLA----------REVAALPAYWW 185
>gi|167758901|ref|ZP_02431028.1| hypothetical protein CLOSCI_01247 [Clostridium scindens ATCC 35704]
gi|167663641|gb|EDS07771.1| hypothetical protein CLOSCI_01247 [Clostridium scindens ATCC 35704]
Length = 235
Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 67/180 (37%), Gaps = 25/180 (13%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P+ +K+ + +++LG ++ Y R+ + + K+ ++S
Sbjct: 78 PRGQKEYDYLIILGAHVEGRKITDSL--------YRRLNKALIYLKAHPGTRA----VVS 125
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG + E+ + L+ G+ I E S T +N +FS + N ++ +V
Sbjct: 126 GGQGTGEDVTEAQAMEDYLIAQGIASYRIIKEEASTTTQENLKFSKRYM-NCGEADVGIV 184
Query: 180 SSAYHLKRSQLYFQHFGI-NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S+ +HL R+ Y + G + + A L ++E + +
Sbjct: 185 SNNFHLYRACAYARRLGYGHPYPLAASCHPAL-----------LVNYMVRECFAVWKMWL 233
>gi|289450181|ref|YP_003474931.1| hypothetical protein HMPREF0868_0608 [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289184728|gb|ADC91153.1| conserved hypothetical protein [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 231
Score = 94.2 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 78/226 (34%), Gaps = 36/226 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + C L+ + + +P L L R + + I++LG
Sbjct: 25 PRRRPSLNQIIVCSGLVLCLL-FLAVP--LWMGLAVK-GRQISNADDIPKAECIMVLGAR 80
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
PS R+ + LY K I++SGG E+IV
Sbjct: 81 VYKD--------RPSHMLEGRLEAAISLYFKQKAPQ----ILVSGG-GAGTDFDEAIVMR 127
Query: 136 NKLLESGVERDDIKLETQSLDTFQ---NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
L+ GV + I ++ ++T+Q NA F K I++ ++ YH++RS
Sbjct: 128 RYLISRGVPAESIIMDHAGINTYQSCYNATF------KFGYKKILIATTEYHMQRSLFLA 181
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G++ S P + + +E + L A Y
Sbjct: 182 TKLGLDCYGYAS----------PDKLAYGMPFNYGREALAKLKAIY 217
>gi|330976846|gb|EGH76877.1| hypothetical protein PSYAP_09340 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 182
Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 58/174 (33%), Gaps = 8/174 (4%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQ 61
+ ++ LI+ +W + F + + + + + L+ P
Sbjct: 16 ILFVLLILGWWLRRTRPRLAATFFAVGLGGLWLMSLPVAVEFAARKLEQVPPLPQQQWAT 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + IV+LGNG P+ R+ RL K I+ SGG
Sbjct: 76 LAQQADAIVVLGNGRERNSPTWGT-DTPTGLGLERLRLAARLAK-----ESGLPILTSGG 129
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+E+ + L + E S T +NA S+++++ K
Sbjct: 130 LHFDQPPSEASIMAQSL-QDDFAVAVRWQEGLSRTTGENATMSAAILQPQGIKR 182
>gi|326792615|ref|YP_004310436.1| hypothetical protein Clole_3554 [Clostridium lentocellum DSM 5427]
gi|326543379|gb|ADZ85238.1| protein of unknown function DUF218 [Clostridium lentocellum DSM
5427]
Length = 233
Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 75/211 (35%), Gaps = 28/211 (13%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFS-YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+ F+F+ +I ++ Y P +P D +I++LG
Sbjct: 15 VFIIGLGFFTFLASLLINLYMINTANTYIYSSPNDTPLL--DSGVIIVLGAQVHSNGN-- 70
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS R+ +YK ++ I++SG QK+ E + L+ G+
Sbjct: 71 -----PSGILKDRLDTAYAIYK----NNSQLKILVSGDHGQKN-YDEVNAMKDYLISLGI 120
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
I L+ T++ + + + I+V+ YHLKR+ GI
Sbjct: 121 PTKQIYLDHAGFSTYETMYRAKEIFE---VNKAIIVTQDYHLKRAVYLANGRGIEAYGVK 177
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+D L+ P F +EY+ +
Sbjct: 178 ADILS-----YPNIKYFEA-----REYLARV 198
>gi|32471470|ref|NP_864463.1| hypothetical protein RB1526 [Rhodopirellula baltica SH 1]
gi|32443311|emb|CAD72142.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
Length = 328
Score = 93.4 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 85/263 (32%), Gaps = 44/263 (16%)
Query: 3 LSWIFLIVSYWHLLCQSIR-------KIFFMSCFMLLFSFIGWGIIPTILL----KHLQF 51
L W+ ++ L Q R + + +CF ++ +G G + LQ
Sbjct: 72 LVWLGMLALTAFALRQWRRGTHSVVKALGWFTCF-FVWWMVGNGDFANWMSGRVESPLQM 130
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
L + + +V+LG G++ + + R+ + Y +
Sbjct: 131 EPSPALEQRDLDRPLDAVVVLGGGSSAVAP----GFYELGRDGERVISAAQAYHAGATR- 185
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
II++G + L+ GV D I ++T + ++++
Sbjct: 186 ---KIIVTGSSTDGYEPP-WKQSTQLLMSLGVPEDVIVRIE-GVNTQAEMRSLKQLMESP 240
Query: 172 QGK---------------NIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYY 211
+ + L++SA+H+ R+ + + + +
Sbjct: 241 PSESNELRPDNTDSPDELKVGLITSAFHMPRAMRLAKASSLELIPLPCAFRASSNERPWI 300
Query: 212 --SIIPLSANFYLTELALKEYIG 232
S++P + N +KE I
Sbjct: 301 ASSLVPGAGNLETVAKMIKETIA 323
>gi|229145780|ref|ZP_04274161.1| hypothetical protein bcere0012_29310 [Bacillus cereus BDRD-ST24]
gi|228637761|gb|EEK94210.1| hypothetical protein bcere0012_29310 [Bacillus cereus BDRD-ST24]
Length = 125
Score = 93.4 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLY 191
+ + + ++ E +S T+QN FS ++++++G N I ++ +H+ R+ LY
Sbjct: 1 MQEYAVNNRIPLENTIKEDRSTTTYQNMLFSKRIMESLKGTQYNCIFSTNNFHVFRAGLY 60
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ G+N++ S +A +Y ++EYI I +
Sbjct: 61 AKIVGLNSQGIGS-----------KTAFYYWPNAMIREYIAIFVM 94
>gi|169830663|ref|YP_001716645.1| hypothetical protein Daud_0467 [Candidatus Desulforudis audaxviator
MP104C]
gi|169637507|gb|ACA59013.1| protein of unknown function DUF218 [Candidatus Desulforudis
audaxviator MP104C]
Length = 264
Score = 93.4 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 84/218 (38%), Gaps = 33/218 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
R++ ++ L+ + + W +P + R L+ ++V+L
Sbjct: 25 FAFWRRRLRNLALGTLVLAAVVWLSLPAV---------GRFLVVADKPAPAEVLVVLSG- 74
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
R+ RLY+ + +++SGG P L E+ +
Sbjct: 75 ----------------DRGERLEYAFRLYQE----GLADRLLLSGG-PLYADLTEADLLR 113
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L GV I +E ++ +T+QNA +S M++ + I++SS YH++R + F
Sbjct: 114 RHALMLGVPEYKIIMEPRATNTYQNALYSREMMEYYGLDSAIVISSPYHMRRVRALFDEV 173
Query: 196 --GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
G + + ++++ + + L EY+
Sbjct: 174 YRGSDIRLVYLPVEDSWFDPERWWESAAGRRVVLAEYL 211
>gi|116512584|ref|YP_811491.1| hypothetical protein LACR_1892 [Lactococcus lactis subsp. cremoris
SK11]
gi|116108238|gb|ABJ73378.1| hypothetical protein LACR_1892 [Lactococcus lactis subsp. cremoris
SK11]
Length = 361
Score = 93.0 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/240 (18%), Positives = 83/240 (34%), Gaps = 36/240 (15%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
+L+ W++L + L I + +L ++ W L + R
Sbjct: 128 LLIDWVYLSMG--RLPDSWIWLKILGIVYPVLSIYLAWQFGIFFLSSWVYGRRVR----- 180
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K+ V+LG G +RI ++ + + + SG
Sbjct: 181 --KQRAAYHVVLGAGLIQ-------GEHVGKLLGNRILAAVKAVRDNET-----ILFFSG 226
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G L+E +E G + LE QS T++N FSS +IK +
Sbjct: 227 GQGPDEKLSEVRAMQKYAVEVLGFPIERTMLEDQSRTTYENLVFSSRLIKE----KFMFF 282
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+S YH+ R+ L+ I+ + +A +Y ++E+I ++ R
Sbjct: 283 TSDYHVFRAALFAATLKIDAQG----------GKGGKTAMYYRVPAFIREFIAVMNYEKR 332
>gi|71276641|ref|ZP_00652913.1| Protein of unknown function DUF218 [Xylella fastidiosa Dixon]
gi|71898002|ref|ZP_00680207.1| Protein of unknown function DUF218 [Xylella fastidiosa Ann-1]
gi|71900050|ref|ZP_00682194.1| Protein of unknown function DUF218 [Xylella fastidiosa Ann-1]
gi|170730100|ref|YP_001775533.1| hypothetical protein Xfasm12_0924 [Xylella fastidiosa M12]
gi|182681372|ref|YP_001829532.1| hypothetical protein XfasM23_0820 [Xylella fastidiosa M23]
gi|71162568|gb|EAO12298.1| Protein of unknown function DUF218 [Xylella fastidiosa Dixon]
gi|71730193|gb|EAO32280.1| Protein of unknown function DUF218 [Xylella fastidiosa Ann-1]
gi|71732246|gb|EAO34301.1| Protein of unknown function DUF218 [Xylella fastidiosa Ann-1]
gi|167964893|gb|ACA11903.1| conserved hypothetical protein [Xylella fastidiosa M12]
gi|182631482|gb|ACB92258.1| protein of unknown function DUF218 [Xylella fastidiosa M23]
Length = 182
Score = 93.0 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 18/173 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++I++LG A +PS RI + LY+ H T+I +G
Sbjct: 19 DQAASSDVIIVLGA--------AAYDAKPSPVFEERIRHGLYLYQ----HGYAPTLIFTG 66
Query: 121 GDPQKHGL-AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G AES V L V I +ET S T QN + +++ + I+V
Sbjct: 67 GFGGSSARFAESQVARRYALRYDVPSRAILIETVSRTTRQNLIQARQLMRVYGLRRAIVV 126
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSD-----YLNAYYSIIPLSANFYLTELAL 227
S H+ R+ + I+ AS + L+ + + F+ +L +
Sbjct: 127 SDPLHMARALRLCRELDIDALASATPSTRFRSLHTRWRFLLQEVYFFHRDLVI 179
>gi|269104339|ref|ZP_06157035.1| hypothetical protein VDA_000496 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268160979|gb|EEZ39476.1| hypothetical protein VDA_000496 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 326
Score = 93.0 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 43 TILLKHLQFSYQRPLLS--PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+L+ L P+ P + + I++LG ++ P +
Sbjct: 128 DLLIHTLHHCLSLPIKHNLPNSNLNNHAIIVLG-----------HQLNPDGTLSDFAKDR 176
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
+++ K+ + I ++GG Q +G++E+ L E G++ DI LE QS +T +N
Sbjct: 177 LKIAIKLKKKITNSLIFLTGGRAQ-NGMSEAQAMKQWLQERGIDHSDIVLEEQSRNTIEN 235
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
AQ++ ++ ++ ++S++ H+ R+ L F
Sbjct: 236 AQYTVPLLHLYAIESATIISNSIHVHRALLAF 267
>gi|46198505|ref|YP_004172.1| hypothetical protein TTC0197 [Thermus thermophilus HB27]
gi|55980534|ref|YP_143831.1| hypothetical protein TTHA0565 [Thermus thermophilus HB8]
gi|46196127|gb|AAS80545.1| hypothetical conserved protein [Thermus thermophilus HB27]
gi|55771947|dbj|BAD70388.1| conserved hypothetical protein [Thermus thermophilus HB8]
Length = 181
Score = 93.0 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 60/166 (36%), Gaps = 16/166 (9%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++ + IV+LG PS R+ + L++ + I ++GG
Sbjct: 19 QETYDWIVVLGA--------AQYGGRPSPALERRLQAALHLFREGRGR----RIAVAGGK 66
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ +E V L GV + + ET+S T++N F ++ ++LV+ A
Sbjct: 67 APEDLYSEGEVGCRYLAARGVPEEALFCETRSRSTYENLLFLKPHLEG----RLLLVTDA 122
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
HL R+ + G+ + + L L+
Sbjct: 123 PHLPRALFLARLLGLEAEGYPVPGNYPLGYWAKEALYRLWLYLGLR 168
>gi|229051580|ref|ZP_04195052.1| hypothetical protein bcere0027_54850 [Bacillus cereus AH676]
gi|296503712|ref|YP_003665412.1| hypothetical protein BMB171_C2882 [Bacillus thuringiensis BMB171]
gi|228721770|gb|EEL73242.1| hypothetical protein bcere0027_54850 [Bacillus cereus AH676]
gi|296324764|gb|ADH07692.1| hypothetical protein BMB171_C2882 [Bacillus thuringiensis BMB171]
Length = 121
Score = 93.0 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLY 191
+ + + ++ E +S T+QN FS ++++++G N I ++ +H+ R+ LY
Sbjct: 1 MQEYAVNNRIPLENTIKEDRSTTTYQNMLFSKRIMESLKGTQYNCIFSTNNFHVFRAGLY 60
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ G+N++ S +A +Y ++EYI I +
Sbjct: 61 AKIVGLNSQGIGS-----------KTAFYYWPNAMIREYIAIFVM 94
>gi|260654419|ref|ZP_05859909.1| putative Bme2 protein [Jonquetella anthropi E3_33 E1]
gi|260631052|gb|EEX49246.1| putative Bme2 protein [Jonquetella anthropi E3_33 E1]
Length = 241
Score = 93.0 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 45/243 (18%), Positives = 96/243 (39%), Gaps = 35/243 (14%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
L + + W LL + R +++ +L+F + L+ ++ L P+
Sbjct: 21 PLGLLLWGTALWLLLGRRKR---WLAAGLLVFLAACTPLGGKWALRAVES-----LCPPR 72
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++L G +R S S R+ ++ + I++SG
Sbjct: 73 SDQKPASVLVLSGGAVFD----GVRFTASPASVRRLRFALQ-------QTNGGPILLSG- 120
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
ES + + L E + ++ +E S T +N +FS+ +++ M G LV+
Sbjct: 121 -------IESPLLLSWLSERK-DLREVLIERSSRTTEENFRFSAPILRKMSGPTA-LVTD 171
Query: 182 AYHLKRSQLYFQ------HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+H+ R+ L+ + F S + + + ++P S T +AL+E + +L
Sbjct: 172 KFHMARAALWARFYAPDVQFVFAPVPSYAPPVRLPFDLLPSSKGLDYTTMALREALALLR 231
Query: 236 AYY 238
Sbjct: 232 DRL 234
>gi|254453829|ref|ZP_05067266.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198268235|gb|EDY92505.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 158
Score = 92.6 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 15/157 (9%)
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
R PS R LY+S S +++ GG Q H +E+ V + LL +GV
Sbjct: 12 WREGPSPTLRRRTLHAAALYQSGHITS----LVLCGGVGQ-HPPSEAAVMQDILLGAGVP 66
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINTKAS 202
D + LE S T +N +F+ +I +++++ YH R++L + G++ +S
Sbjct: 67 MDAMVLEDHSTTTGENIRFARDLIHETDVAIIEVVIITDWYHAPRAKLIARRAGLHATSS 126
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A P + + AL+E + R
Sbjct: 127 SPSLRGA--KFWPQTKS------ALREIPAYIAYAIR 155
>gi|327543348|gb|EGF29776.1| membrane protein containing DUF218 [Rhodopirellula baltica WH47]
Length = 329
Score = 92.6 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/263 (14%), Positives = 83/263 (31%), Gaps = 44/263 (16%)
Query: 3 LSWIFLIVSYWHLLCQSIR-------KIFFMSCFMLLFSFIGWGIIPTILL----KHLQF 51
L W+ ++ Q R + + +CF ++ +G + LQ
Sbjct: 73 LVWLGMLALTAFAFRQWRRGTHSVVKALGWFTCF-FVWWMVGNSDFANWMSGRVESPLQM 131
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
L + + +V+LG G++ + + R+ + Y +
Sbjct: 132 EPSPALEQRDLDRPLDAVVVLGGGSSAVAP----GFYELGRDGERVISAAQAYHAGATR- 186
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
II++G + L+ GV D I ++T Q ++++
Sbjct: 187 ---KIIVTGSSTDGYEPP-WKQSTQLLISLGVPEDVIVRIE-GVNTQAEMQSLKQLMESP 241
Query: 172 QGK---------------NIILVSSAYHLKRSQLYFQHFGINTKASCSDYL-----NAYY 211
+ + L++SA+H+ R+ + + + +
Sbjct: 242 PSESNELRPDNTDSPDELKVGLITSAFHMPRAMRLAKASSLELIPLPCAFRAEDKQRPWV 301
Query: 212 --SIIPLSANFYLTELALKEYIG 232
S++P + N +KE I
Sbjct: 302 ASSLVPNAENLETVAKMIKETIA 324
>gi|269837462|ref|YP_003319690.1| hypothetical protein Sthe_1433 [Sphaerobacter thermophilus DSM
20745]
gi|269786725|gb|ACZ38868.1| protein of unknown function DUF218 [Sphaerobacter thermophilus DSM
20745]
Length = 216
Score = 92.6 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 64/175 (36%), Gaps = 18/175 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV+LG PS +R+ L+++ I+++G
Sbjct: 54 DETAEADAIVVLG--------TAQFDGRPSPTFQARLDHARALFEA----GYAPLIVLTG 101
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + +E+ N L+E GV + + ++ + + ++ I+LVS
Sbjct: 102 GAAEGDWTSEAEAGRNYLIEQGVPSGVLLSVPAGRTSSESLREAEPELRERGISRILLVS 161
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAY------YSIIPLSANFYLTELALKE 229
+H+ R + + G + AS + Y + YL + +KE
Sbjct: 162 DPFHMFRVKRIARDLGFSPLASPTRSSPIREDSSLEYRYMAREIGAYLAYVFIKE 216
>gi|239627755|ref|ZP_04670786.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517901|gb|EEQ57767.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 241
Score = 92.2 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 36/228 (15%), Positives = 86/228 (37%), Gaps = 46/228 (20%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTI-LLKHLQFSYQRPLLSPQWK 63
+FL+ W+ R ++ ++ G + + +L L + K
Sbjct: 7 LLFLVYGRWYYSRNMDRIPRWVPVSVVTTCVAGVVALAVLCVLVFLG-------AASSDK 59
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K+ + +++LG S R+ + + + + +++SGG
Sbjct: 60 KNLDYVIVLGA--------RVKEHTVSNSLKKRLDKAIE----YAEENPDTILVLSGGRG 107
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-------- 175
++E+ V L +GV + + +E +S+ T +N +S +I+ + ++
Sbjct: 108 PGEDVSEAEVMRQYLEYNGVRPEQLLIEDRSVSTVENIAYSKVVIEEHRNRDKKELVPLT 167
Query: 176 -----------------IILVSSAYHLKRSQLYFQHFGI-NTKASCSD 205
I +++S +H+ R++L + +GI N +D
Sbjct: 168 RRTTSVPYAIAPDKPLEIGVLTSNFHIYRARLTAEKWGIENVYGISAD 215
>gi|255280737|ref|ZP_05345292.1| membrane associated protein [Bryantella formatexigens DSM 14469]
gi|255268674|gb|EET61879.1| membrane associated protein [Bryantella formatexigens DSM 14469]
Length = 260
Score = 92.2 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 62/156 (39%), Gaps = 21/156 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + D +++++LG +PS R+ R K + ++SG
Sbjct: 95 KPQADMDVLIVLGA--------QVKGEQPSRALLRRLEAAERYLKE----NPDTVAVLSG 142
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG------K 174
G + E+ G++ + LE S T +N FS+ I G +
Sbjct: 143 GKGDGEDITEAECMYRYFTGQGIDASRLILEDSSTSTAENLTFSAGKIAEYFGEDGGMSR 202
Query: 175 NIILVSSAYHLKRSQLYFQHFG---INTKASCSDYL 207
L+S+ +H+ R++L + G +++ + SD+
Sbjct: 203 KTGLLSNNFHVYRARLLAEKMGYTDVHSVPAASDWR 238
>gi|197286351|ref|YP_002152223.1| hypothetical protein PMI2504 [Proteus mirabilis HI4320]
gi|227357403|ref|ZP_03841758.1| transporter [Proteus mirabilis ATCC 29906]
gi|194683838|emb|CAR44949.1| putative exported protein [Proteus mirabilis HI4320]
gi|227162408|gb|EEI47405.1| transporter [Proteus mirabilis ATCC 29906]
Length = 379
Score = 92.2 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 12/165 (7%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
L + K N IV LG T+ I R+ +T+ + K
Sbjct: 194 PADLATLNKTKGNNAIVTLGYALNPDGTMNQI-------LIDRLNKTLEVAKQL----PD 242
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
I+++GG P+ H E + + L++ G+ + I + + T +NA FS + +
Sbjct: 243 AMIVVTGGVPKAH-QTEGKLMADWLVKKGIPAERIFQDNYARSTVENALFSRYALTKHRI 301
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
K +++SS H++R+ F + S YL PL+
Sbjct: 302 KTAVIISSGSHVRRADAIFTVASWQSGPSDITYLTVVAPDKPLAE 346
>gi|196232487|ref|ZP_03131340.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
gi|196223559|gb|EDY18076.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
Length = 193
Score = 91.8 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
F+ L + +G+ + TI+L ++ ++LG+ T
Sbjct: 10 LFLSLVAVLGFLHLGTIVLVIAGLR--------DDLGHADVGLVLGSKVETNGT------ 55
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
PS + +R+ T+ Y++ II+SGG K G E+IV + L+ G+ +
Sbjct: 56 -PSTRLRARLDRTLECYRAGYFPE----IIVSGGIG-KEGYDEAIVMRDYLVAHGLPGEH 109
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
I L+ + + TF +A+ + + + ++ ++S +HL R++L FG T
Sbjct: 110 ILLDNKGVTTFASARNTRDIAQQRNFHSVFVISQYFHLPRARLALHRFGFTTV 162
>gi|239624750|ref|ZP_04667781.1| exported protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521136|gb|EEQ61002.1| exported protein [Clostridiales bacterium 1_7_47FAA]
Length = 239
Score = 91.8 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 76/193 (39%), Gaps = 18/193 (9%)
Query: 19 SIRKIFFMSC-FMLLFSFIGWGIIPTILLKHL--QFSYQRPLLSPQWKKDGNIIVLLGNG 75
+KI + L+ + G ++ + L + + Y + +D + I++LG G
Sbjct: 2 KKKKIVGKAVRVFLVLALAGCLVLFLVNLYIIRKEEKYIVSAEEARAFEDVDCIMVLGCG 61
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
PS R+ + + LYK + +++SG D K E +
Sbjct: 62 VRPD-------GSPSGMLNDRLVQGISLYKE----DVSDRLLMSG-DHGKVNYDEVNLMK 109
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
++ GV ++I ++ T+++ + + + K I++V+ YH+ R+ Q
Sbjct: 110 QFAIDRGVPSENIFMDHAGFSTYESMYRARDIFQ---VKKIVIVTQRYHMYRALYVAQAM 166
Query: 196 GINTKASCSDYLN 208
G+ SD
Sbjct: 167 GMEAYGVASDPRT 179
>gi|326384925|ref|ZP_08206599.1| hypothetical protein SCNU_18362 [Gordonia neofelifaecis NRRL
B-59395]
gi|326196315|gb|EGD53515.1| hypothetical protein SCNU_18362 [Gordonia neofelifaecis NRRL
B-59395]
Length = 210
Score = 91.8 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 66/156 (42%), Gaps = 19/156 (12%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
G IV+LG + P I R+ L ++ + II++GG+
Sbjct: 74 NPPGRYIVVLGARMETLGNPPKI-------LAQRLDRAASLARANPFN----RIIVTGGN 122
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ E++ + +L + GV + E ++ T +NAQ + +M+K + ++V++
Sbjct: 123 SWWLPVPEAMFMHAQLAQRGVTPLKVIEEPTAMSTVENAQRTVAMLKGLNASGAVIVTND 182
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
+H+KR+ F+ + N + +P A
Sbjct: 183 FHMKRALDNFRDE--------AKRQNTRLTFVPSYA 210
>gi|254436861|ref|ZP_05050355.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
gi|198252307|gb|EDY76621.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
Length = 221
Score = 91.5 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
LL +S+ ++F + + + L +++ P + + + IV LG
Sbjct: 2 LLVRSVGRLFKFAILAFVLMTLSI----------LAWTFMWPQPELRALQPADAIVCLGG 51
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + A + +R+ ++L+++ + I+ SGG + +G +
Sbjct: 52 GMNANGALSAP-------TLTRVERCVQLFEA----GLAPVIVFSGGIARPNGPSAGRQM 100
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ G+ ++ I E + T QNA FS +I N + II+V+ A+HL RS F+
Sbjct: 101 GRIAMTLGLPQNAIVQEGLAQSTLQNALFSLPLIPNA--ERIIIVTEAFHLPRSWASFR 157
>gi|25028730|ref|NP_738784.1| hypothetical protein CE2174 [Corynebacterium efficiens YS-314]
gi|23494016|dbj|BAC18984.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 252
Score = 91.5 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 79/204 (38%), Gaps = 25/204 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
+++ + G++ +L+ L +S RP + + I++LG PS
Sbjct: 32 VYAAVIVGVVAQPVLRSLLYSLWRPGNDRRVIES---ILVLG--------TAQYDGRPSR 80
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
Q +R+ +L++ + + + GG E+ V L+ GVE D I +
Sbjct: 81 QFAARLRHAAQLWRQHESQ----RVYVVGGKLPGDRFTEAEVAREYLIREGVEPDLIISQ 136
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
DT + S + + +++V+ H R+ + G + + + Y A +
Sbjct: 137 PTGNDT----RGSYAPLDPADVGRVLIVTDPNHSYRAVRIARRMGFDAYPAPTPYTPATF 192
Query: 212 SIIPLSANFYLTELALKEYIGILI 235
P + F E+ G+L+
Sbjct: 193 ---PSKSFFTTLS---HEWGGVLV 210
>gi|326789428|ref|YP_004307249.1| hypothetical protein Clole_0304 [Clostridium lentocellum DSM 5427]
gi|326540192|gb|ADZ82051.1| protein of unknown function DUF218 [Clostridium lentocellum DSM
5427]
Length = 239
Score = 91.1 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/235 (15%), Positives = 84/235 (35%), Gaps = 29/235 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
M+ W+ + + L + I F + F IG + ++ +
Sbjct: 28 MVPVWLGVGIVATLLSFKRIFNKCFRIKLIKAFFAIGILVFV-----GVESFIVWSGVKS 82
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + I++LG PS R+ + ++SG
Sbjct: 83 VPGEACDFIIVLGAQVRGD--------TPSVTLQYRLESAY----DYLMVNPQTKAVLSG 130
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILV 179
G E+ L+E G+E + + LE QS T++N ++S ++I ++ N+ +V
Sbjct: 131 GQGPDEITTEAEAMRRYLVEKGIEEERLILEEQSTSTYENLKYSFAIIDEIKANSNVSIV 190
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++ +H+ R+++ G + S + + +E+ ++
Sbjct: 191 TNRFHVLRARMIASDMGRKVDGIGA-----------KSYFYLIPNYYFREFFAVM 234
>gi|269925497|ref|YP_003322120.1| protein of unknown function DUF218 [Thermobaculum terrenum ATCC
BAA-798]
gi|269789157|gb|ACZ41298.1| protein of unknown function DUF218 [Thermobaculum terrenum ATCC
BAA-798]
Length = 188
Score = 91.1 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 64/175 (36%), Gaps = 18/175 (10%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ I++LG PS +R+ + LYK + +++ GG +
Sbjct: 32 DAILVLGA--------AQYNGRPSPVFRARLDHALALYK----KRLAPKVVVVGGKARGD 79
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E+ LL G+ + T+ + + + +M++ +++I+VS +H+
Sbjct: 80 TYTEADSGVRYLLRRGIPSSSLVAVPHGRSTYSSLRAAKNMLQPKHVRSLIIVSDRFHMY 139
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
RS + G S + ++ P + T ++E + G
Sbjct: 140 RSLEMAKSLGFRVTGSPTP--DSPIDKDPAAE----TRYVIREALAYTAYRISGR 188
>gi|293376843|ref|ZP_06623062.1| conserved domain protein [Turicibacter sanguinis PC909]
gi|325837249|ref|ZP_08166327.1| hypothetical protein HMPREF9402_2581 [Turicibacter sp. HGF1]
gi|292644537|gb|EFF62628.1| conserved domain protein [Turicibacter sanguinis PC909]
gi|325491023|gb|EGC93318.1| hypothetical protein HMPREF9402_2581 [Turicibacter sp. HGF1]
Length = 184
Score = 91.1 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 23/199 (11%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
I W +L HL+ + L + + D N +++LG+ E S
Sbjct: 4 ILIAWVTYTIVL--HLEMNSS---LHEELEADINQLIILGS--------LLHSNEVSTTL 50
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLET 152
SR+ + L + +I++GG+ L E+ + N L+E G+ D I +E
Sbjct: 51 RSRLEKGALLLHE----NPQLRVIVTGGNGTDLKLPEAHIMKNVLIEEFGISEDRIIVED 106
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN--TKASCSDYLNAY 210
+ +TF+N F +IK + + +V+S +H R++L +N + +D Y
Sbjct: 107 LARNTFENLLFCKPLIKE---ERVAIVTSEFHSIRTRLLAHRLHLNCQLIGAKTDSRKRY 163
Query: 211 YSIIPLSANFYLTELALKE 229
+ + +E
Sbjct: 164 KWELREQLALVKSLFLDRE 182
>gi|259507791|ref|ZP_05750691.1| secreted protein [Corynebacterium efficiens YS-314]
gi|259164584|gb|EEW49138.1| secreted protein [Corynebacterium efficiens YS-314]
Length = 231
Score = 91.1 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 79/204 (38%), Gaps = 25/204 (12%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
+++ + G++ +L+ L +S RP + + I++LG PS
Sbjct: 11 VYAAVIVGVVAQPVLRSLLYSLWRPGNDRRVIES---ILVLG--------TAQYDGRPSR 59
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
Q +R+ +L++ + + + GG E+ V L+ GVE D I +
Sbjct: 60 QFAARLRHAAQLWRQHESQ----RVYVVGGKLPGDRFTEAEVAREYLIREGVEPDLIISQ 115
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
DT + S + + +++V+ H R+ + G + + + Y A +
Sbjct: 116 PTGNDT----RGSYAPLDPADVGRVLIVTDPNHSYRAVRIARRMGFDAYPAPTPYTPATF 171
Query: 212 SIIPLSANFYLTELALKEYIGILI 235
P + F E+ G+L+
Sbjct: 172 ---PSKSFFTTLS---HEWGGVLV 189
>gi|227532864|ref|ZP_03962913.1| transporter [Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227189503|gb|EEI69570.1| transporter [Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 314
Score = 91.1 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 49 LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
L + P P+ V+LG + P+ + + + + +
Sbjct: 186 LDIQTKIPNDLPKDSHH--YFVVLG-----------YALSPNGKMQPTMKKRLEIALKAA 232
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ I+++GG P+ + L E+ V L+ G+ + I+LE S +T +NA FS +
Sbjct: 233 KKYSKSKILVAGGVPE-NKLTEATVMQKWLVAHGIAKKRIELEDLSTNTVENALFSVREL 291
Query: 169 KNMQGKNIILVSSAYHLKRSQLY 191
+ + L++SA H++R+ L
Sbjct: 292 VDRGATSATLITSATHMRRAFLL 314
>gi|312139306|ref|YP_004006642.1| hypothetical protein REQ_18910 [Rhodococcus equi 103S]
gi|311888645|emb|CBH47957.1| putative secreted protein [Rhodococcus equi 103S]
Length = 206
Score = 90.7 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 11/128 (8%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG +PA+ SR+ + + + +I+SGG Q
Sbjct: 76 YIVVLGARLNADGLLPAVLN-------SRLNTAAAIARLHPAN----KVIVSGGPTQPLP 124
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV +I L+ S T NA+ ++ ++ +LV+SA H+ R
Sbjct: 125 YTEAQAMLAGLVLRGVNPANIVLDNDSFSTVDNARNTTQILSAAGADGAVLVTSASHIDR 184
Query: 188 SQLYFQHF 195
+ FQ
Sbjct: 185 ALATFQSA 192
>gi|269963292|ref|ZP_06177623.1| hypothetical protein VME_40070 [Vibrio harveyi 1DA3]
gi|269831931|gb|EEZ86059.1| hypothetical protein VME_40070 [Vibrio harveyi 1DA3]
Length = 207
Score = 90.7 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 30/186 (16%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ ++V+LG+ +P +RLYK K +
Sbjct: 38 PTHQDEFQHAEVLVVLGSYKATQYKMPT---------------AVRLYKEKKVS----KL 78
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGK 174
++SGG+ E L++GV DI LE + +T +NAQ+SS +I + +
Sbjct: 79 LLSGGNLAIDQKPEFESMKEYALDNGVPDSDIILERHAKNTVENAQYSSEIILESEIAKR 138
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL------K 228
++ ++++A+H+KR++ F++ S ++N + N++LTE A+
Sbjct: 139 SVAILTTAFHIKRAKYLFKNALPQYLELHSYFVNDRST---RRDNWWLTESAISRVMHSH 195
Query: 229 EYIGIL 234
E I L
Sbjct: 196 EVIKRL 201
>gi|298370445|ref|ZP_06981761.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281905|gb|EFI23394.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 199
Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+RKI ++ +++ + +G + + + ++P+ S + V+LG I
Sbjct: 2 LRKILWIGTGLVILWLLLFGWV----WGNNFYRSRQPVESI---APADTAVILG-----I 49
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
R P SR+ + L+K+ K +I+SGG G +
Sbjct: 50 SVHDEGRQNPCL--ISRVEAGVELWKAGKVK----KLIMSGGM-NHDGYVGAQSMMQTAE 102
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ G+ R+ I+LE S T QN +++ MI+ K++++VSSAYH+ R++
Sbjct: 103 KMGIPREVIELEDHSETTHQNILYTAPMIEQ--DKSVVIVSSAYHIPRARWIAGKL 156
>gi|325673388|ref|ZP_08153079.1| transporter [Rhodococcus equi ATCC 33707]
gi|325555409|gb|EGD25080.1| transporter [Rhodococcus equi ATCC 33707]
Length = 199
Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 11/128 (8%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG +PA+ SR+ + + + +I+SGG Q
Sbjct: 69 YIVVLGARLNADGLLPAVLN-------SRLNTAAAIARLHPAN----KVIVSGGPTQPLP 117
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV +I L+ S T NA+ ++ ++ +LV+SA H+ R
Sbjct: 118 YTEAQAMLAGLVLRGVNPANIVLDNDSFSTVDNARNTTQILSAAGADGAVLVTSASHIDR 177
Query: 188 SQLYFQHF 195
+ FQ
Sbjct: 178 ALATFQSA 185
>gi|262201027|ref|YP_003272235.1| hypothetical protein Gbro_1032 [Gordonia bronchialis DSM 43247]
gi|262084374|gb|ACY20342.1| protein of unknown function DUF218 [Gordonia bronchialis DSM 43247]
Length = 228
Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG PAI R+ RL K + M ++SGG+
Sbjct: 97 YIVVLGAKMGTFGQTPAILDR-------RLNVAARLAKQHPFNRM----VVSGGNTWWLP 145
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++E+ N LL G+ + E +S T QNA ++ M+K M ++V++ +H+ R
Sbjct: 146 VSEAQFMNLGLLRRGIPMWQMVNEGRSTSTVQNATYTVGMLKAMGANGAVIVTNGFHMGR 205
Query: 188 SQLYFQHF 195
+ F+
Sbjct: 206 ALNDFRAA 213
>gi|261212701|ref|ZP_05926985.1| hypothetical protein VCJ_002977 [Vibrio sp. RC341]
gi|260837766|gb|EEX64443.1| hypothetical protein VCJ_002977 [Vibrio sp. RC341]
Length = 335
Score = 90.3 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 67/183 (36%), Gaps = 15/183 (8%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ Q IV LG + P + + + + + + + I
Sbjct: 153 AEATQKLGQDGAIVTLG-----------YALNPDGSMHEILIKRLETTLAMAKANPDAVI 201
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I++GG PQ H E + + L+E V I E + T NA FSS + K+
Sbjct: 202 ILTGGVPQNHK-TEGKLMADWLVEHDVSATRIIEENYATSTVDNALFSSYALARHGIKHA 260
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++SSA H++R Q F+ T + Y PLS + E +GI
Sbjct: 261 TIISSASHVRRGQTLFEIASWQTGPRGITFDTVSYPDKPLSELETASSG---ELLGIYRD 317
Query: 237 YYR 239
R
Sbjct: 318 ALR 320
>gi|153010699|ref|YP_001371913.1| hypothetical protein Oant_3378 [Ochrobactrum anthropi ATCC 49188]
gi|151562587|gb|ABS16084.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 206
Score = 90.3 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 76/195 (38%), Gaps = 40/195 (20%)
Query: 53 YQRPLLS-PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
+ P+L+ ++IV+ P R E RL+K +
Sbjct: 20 FSEPVLTLQDDGGRADVIVV-----------------PGGDGPPRAAEAARLWKEGRS-- 60
Query: 112 MHCTIIISG-GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
I+++G GD + ++ GV I +E QS T+QNA+FS+ +++
Sbjct: 61 --PVILVTGDGDCLSN--------KRIMVRKGVTPSAIFVECQSGSTWQNARFSAPLMRE 110
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHF----GINTKASCSDYLNAYYSIIPLSANFYLTELA 226
+Q ++ ++V++ YH +R+ F+ + D + P EL
Sbjct: 111 IQARSALIVTNWYHSRRAIASFRAACPQMRFISSPIGGDDGRPGFPTTPT-----DMELV 165
Query: 227 LKEYIGILIAYYRGN 241
+KEY+ + G
Sbjct: 166 VKEYVKLGWYLISGR 180
>gi|148378651|ref|YP_001253192.1| exported protein [Clostridium botulinum A str. ATCC 3502]
gi|153933579|ref|YP_001383034.1| putative sanA protein [Clostridium botulinum A str. ATCC 19397]
gi|153934960|ref|YP_001386583.1| putative sanA protein [Clostridium botulinum A str. Hall]
gi|226947902|ref|YP_002802993.1| putative SanA protein [Clostridium botulinum A2 str. Kyoto]
gi|148288135|emb|CAL82203.1| putative exported protein [Clostridium botulinum A str. ATCC 3502]
gi|152929623|gb|ABS35123.1| putative SanA protein [Clostridium botulinum A str. ATCC 19397]
gi|152930874|gb|ABS36373.1| putative SanA protein [Clostridium botulinum A str. Hall]
gi|226841482|gb|ACO84148.1| putative SanA protein [Clostridium botulinum A2 str. Kyoto]
Length = 222
Score = 90.3 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 78/194 (40%), Gaps = 19/194 (9%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
I++IF + ++L I + + ++ +++P+ + I++LG
Sbjct: 2 KNKIKRIFMVIMVIVLMGTAAIFFIDFRV----RSESKKYIVNPKDVPEAEAILVLGA-- 55
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ + R+ + LYK+ K ++ SG Q + E
Sbjct: 56 -YVKPNGKLCDMLE----DRVAVGIDLYKNNKAK----KLLFSGDHGQAN-YDEVNGMKK 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ GV+++DI L+ T+++ + + K K II+V+ YHL R+ + G
Sbjct: 106 VAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKA---KKIIIVTQQYHLMRAVYIARQLG 162
Query: 197 INTKASCSDYLNAY 210
++ SD N +
Sbjct: 163 LDAYGVNSDQRNYW 176
>gi|83593886|ref|YP_427638.1| hypothetical protein Rru_A2551 [Rhodospirillum rubrum ATCC 11170]
gi|83576800|gb|ABC23351.1| Protein of unknown function DUF218 [Rhodospirillum rubrum ATCC
11170]
Length = 206
Score = 90.3 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 68/173 (39%), Gaps = 19/173 (10%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
R +G +V+LG PS R+ + L +
Sbjct: 17 RAFPPAGRAGEGCAVVVLGA-------RVLGDGRPSPALERRVLHGVALAR----RHPAA 65
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+++SGG L E+ V L +G+ + + LE ++LDT NA+ S +++ +
Sbjct: 66 RLLLSGG-ATGGPLDEAWVMATLALGAGIAAERLILEDRALDTLGNARHSLPLLRAARIG 124
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
++LV+ H+ R+ L F+ A D+L + P A + A+
Sbjct: 125 RVLLVTDPSHMPRALLSFR-------AVAGDHLRLRAAPTPCPAGGWRNRRAI 170
>gi|169349813|ref|ZP_02866751.1| hypothetical protein CLOSPI_00551 [Clostridium spiroforme DSM 1552]
gi|169293381|gb|EDS75514.1| hypothetical protein CLOSPI_00551 [Clostridium spiroforme DSM 1552]
Length = 196
Score = 90.3 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 84/210 (40%), Gaps = 24/210 (11%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
+L F I I T+ +++ + K IV G
Sbjct: 11 VVLCFVLINVLIFITV--------FKKTQKRQKQSKYDCAIV---CGFPANSD-----GS 54
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS SR+ + + LY H+ II SGG + E+ + + G+++ I
Sbjct: 55 PSLIMKSRVEKAIELY----CHNKIDYIIFSGGKV-HNTYEEAAIMEKYAISLGLDKKII 109
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
E +++ TF N + + ++ + ++V++ +HL+++ Y + +N +D
Sbjct: 110 IKENKAISTFHNLLYCTEIMNEHNFNSCLVVTNGWHLRKANHYARKNKLNYAMVVAD-NP 168
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ ++ + + + T L + YI + YY
Sbjct: 169 SEFNKLKILYLYLKTNLIM--YINLFKGYY 196
>gi|94969638|ref|YP_591686.1| hypothetical protein Acid345_2611 [Candidatus Koribacter versatilis
Ellin345]
gi|94551688|gb|ABF41612.1| protein of unknown function DUF218 [Candidatus Koribacter
versatilis Ellin345]
Length = 202
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 72/197 (36%), Gaps = 23/197 (11%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ I + F W + +++ + +RP+ + IV+ G
Sbjct: 8 RRKIAALVLTVVVAGALFFYAWTCV--RVMQQAETDERRPV---------DAIVVFGA-- 54
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS +R+ + L++ M +I +GG +E V +
Sbjct: 55 ------AEYSGRPSPVLKARLDHGLDLFRQ----DMAPFVITTGGAGGDLHFSEGGVGRD 104
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
LL++GV + ETQ DT Q+A+ + +++ K + VS AYHL R + + G
Sbjct: 105 YLLKNGVPDASLIGETQGGDTAQSAERVAVIMRTNGMKTCLAVSDAYHLFRVKRMMEEQG 164
Query: 197 INTKASCSDYLNAYYSI 213
+ S
Sbjct: 165 MECYGSPRPGSVPRTFW 181
>gi|116490285|ref|YP_809829.1| hypothetical protein OEOE_0171 [Oenococcus oeni PSU-1]
gi|290889671|ref|ZP_06552760.1| hypothetical protein AWRIB429_0150 [Oenococcus oeni AWRIB429]
gi|116091010|gb|ABJ56164.1| hypothetical protein OEOE_0171 [Oenococcus oeni PSU-1]
gi|290480668|gb|EFD89303.1| hypothetical protein AWRIB429_0150 [Oenococcus oeni AWRIB429]
Length = 365
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 88/224 (39%), Gaps = 25/224 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-----WGIIPTILLKHLQFSYQRP 56
L++ IF ++ ++ + KI LF+FI G + T + +
Sbjct: 117 LVTIIFPLLCL--MILFKLFKISLPPVIGYLFAFIPAFVIYLGFVFTNFITQTIIVNLKG 174
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ ++ + + LG G I R+ + +S R+ T+ K + +
Sbjct: 175 KQLLKNRQSFDYSITLGAGL-----IQGKRVSKNLES--RLQRTLDFAKRHH----NPKL 223
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGK- 174
I+SGG ++E+ +++ + LE +S +T +N Q S+ ++++ +
Sbjct: 224 IMSGGQGYDEKISEAKAMRTWIIKHNYSPSKVILEDRSTNTKENFQKSAEKILEDQKTNN 283
Query: 175 -----NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
++ V+++YHL R+ + + Y ++
Sbjct: 284 LGKQIRMVFVTNSYHLTRANYIAFSNNLKIFGIPAKTTRNYLAL 327
>gi|89053049|ref|YP_508500.1| hypothetical protein Jann_0558 [Jannaschia sp. CCS1]
gi|88862598|gb|ABD53475.1| protein of unknown function DUF218 [Jannaschia sp. CCS1]
Length = 153
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
I++LG P +R R L+ + ++I G +
Sbjct: 2 TAILILGAAVWPDGPSPTLRR--------RTLHGAALFHGGRGD-----VVIPCGGLGRF 48
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E+ L ++GV D I+LE S +T +N + + ++ + +++VS AYHL
Sbjct: 49 PPTEAEAMAALLRDAGVPEDRIRLERTSTNTVENIRHALPLL--AGERCVLIVSDAYHLP 106
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
R++L + G+ S A + P + L+E G++ R
Sbjct: 107 RARLIARREGLEVSVSAPPLTGA--RVWPQAKG------WLREIPGLIAVLLR 151
>gi|325681016|ref|ZP_08160548.1| hypothetical protein CUS_5709 [Ruminococcus albus 8]
gi|324107245|gb|EGC01529.1| hypothetical protein CUS_5709 [Ruminococcus albus 8]
Length = 193
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 33/185 (17%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
++I++LG+ R+ E +RLYKS + M + SGG QK
Sbjct: 31 ADLIMVLGS---------------RKACEYRVPEAVRLYKSGRAPMM----LFSGGKVQK 71
Query: 126 HG---LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVS 180
+AE + + GV DI LE S++T +N S ++++ + IILV+
Sbjct: 72 TALGEMAEWLSMETAAISLGVSERDILLEKCSMNTAENFSCSENLLREVLPDGGRIILVT 131
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTEL----ALKEYIGILIA 236
+AYH++R+ L + N+Y T+ L E+ G L
Sbjct: 132 TAYHMRRALLTAEK----ILPQYEFISCPVQKGSATKENWYKTDKGRRTVLDEW-GKLRY 186
Query: 237 YYRGN 241
Y R
Sbjct: 187 YIRAG 191
>gi|296139777|ref|YP_003647020.1| hypothetical protein Tpau_2069 [Tsukamurella paurometabola DSM
20162]
gi|296027911|gb|ADG78681.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 253
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 66/155 (42%), Gaps = 13/155 (8%)
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
++ P G+ IV+LG G + I + R+ + + + ++
Sbjct: 84 TFPLTDQVPGGVAAGSAIVILGFGLEDNGGLRPILV-------ERLTKGLAVAQAY---- 132
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
+I++GG+P+ G E+ L+ G+ + E + T NA ++++++
Sbjct: 133 PAFPVIVTGGNPKA-GKTEAAAMKEWLIGQGISPTRVYTENGAGSTQGNAINTAALMRQN 191
Query: 172 Q-GKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
G +LV+SA H +RS F G+ +A +
Sbjct: 192 GFGNGAVLVTSADHTRRSVADFLVAGVTLQAVVAS 226
>gi|154482903|ref|ZP_02025351.1| hypothetical protein EUBVEN_00600 [Eubacterium ventriosum ATCC
27560]
gi|149736187|gb|EDM52073.1| hypothetical protein EUBVEN_00600 [Eubacterium ventriosum ATCC
27560]
Length = 224
Score = 89.5 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 67/175 (38%), Gaps = 24/175 (13%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG G +PS+ RI +LY + +++SG D
Sbjct: 49 NADCIIVLGAGVK-------PSGKPSWMLEDRIIVGEQLY----NVNAAPKLLMSG-DHG 96
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E N + G+ +DI ++ +T+ + + + K +++VS YH
Sbjct: 97 RENYDEVNTMKNYAINDGIPSEDIFMDHAGFETYDSMYRAKKI---FGAKKVVIVSQKYH 153
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
L RS + G++ SD + +E++ + ++ +
Sbjct: 154 LYRSLYIAKKMGLDAYGVSSD-----LRYYSKKQYYREA----REWLARVKSFIK 199
>gi|254228155|ref|ZP_04921584.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262393954|ref|YP_003285808.1| hypothetical protein VEA_003183 [Vibrio sp. Ex25]
gi|151939228|gb|EDN58057.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262337548|gb|ACY51343.1| hypothetical protein VEA_003183 [Vibrio sp. Ex25]
Length = 205
Score = 89.5 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 32/182 (17%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ ++V+LG+ +P ++LYK K +++
Sbjct: 38 HQDEFQHAEVLVVLGSYKATQYKMPT---------------AVQLYKEKKVS----KLLL 78
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNI 176
SGG+ E L +GV DI LE + +T +NAQFS+ +I + K++
Sbjct: 79 SGGNLAIDRKPEFESMREYALTNGVSESDIILEPHAKNTVENAQFSTEIIVESEVAKKSV 138
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSD-YLNAYYSIIPLSANFYLTELAL------KE 229
++++A+H+KR++ F+ N D Y N++LTE A+ E
Sbjct: 139 AILTTAFHIKRAKHLFK----NVLPQSLDLYGYFVNDRSTRRDNWWLTESAVSRVMHSHE 194
Query: 230 YI 231
I
Sbjct: 195 VI 196
>gi|254228166|ref|ZP_04921595.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262393992|ref|YP_003285846.1| hypothetical protein VEA_003221 [Vibrio sp. Ex25]
gi|151939239|gb|EDN58068.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262337586|gb|ACY51381.1| hypothetical protein VEA_003221 [Vibrio sp. Ex25]
Length = 209
Score = 89.5 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 32/182 (17%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+ ++V+LG+ +P ++LYK K +++
Sbjct: 42 HQDEFQHAEVLVVLGSYKATQYKMPT---------------AVQLYKEKKVS----KLLL 82
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNI 176
SGG+ E L +GV DI LE + +T +NAQFS+ +I + K++
Sbjct: 83 SGGNLAIDRKPEFESMREYALTNGVSESDIILEPHAKNTVENAQFSTEIIVESEVAKKSV 142
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSD-YLNAYYSIIPLSANFYLTELAL------KE 229
++++A+H+KR++ F+ N D Y N++LTE A+ E
Sbjct: 143 AILTTAFHIKRAKHLFK----NVLPQSLDLYGYFVNDRSTRRDNWWLTESAVSRVMHSHE 198
Query: 230 YI 231
I
Sbjct: 199 VI 200
>gi|116624473|ref|YP_826629.1| hypothetical protein Acid_5395 [Candidatus Solibacter usitatus
Ellin6076]
gi|116227635|gb|ABJ86344.1| protein of unknown function DUF218 [Candidatus Solibacter usitatus
Ellin6076]
Length = 195
Score = 89.5 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 73/174 (41%), Gaps = 14/174 (8%)
Query: 31 LLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
LL++ I + + + L ++ + + + ++I++LG R P
Sbjct: 4 LLWNGIALAAVVVMFYVAFLSLRIEQQSVR-EEAQPADVILVLGA--------AEYRGRP 54
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S +R+ + LY I+ +GG E V + L + GV D I
Sbjct: 55 SPVLRARLDHALDLY----SRKFAPRILTTGGSGGDPIFTEGGVGRSYLTQHGVPSDAII 110
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ET+ T ++ ++ +++ M+ ++I+VS YH+ R + + G+ S
Sbjct: 111 VETEGESTVESTTMAAEIMRRMELHSVIVVSDGYHIYRVKQMLEAHGMTAYGSP 164
>gi|266621742|ref|ZP_06114677.1| putative membrane protein [Clostridium hathewayi DSM 13479]
gi|288866566|gb|EFC98864.1| putative membrane protein [Clostridium hathewayi DSM 13479]
Length = 281
Score = 89.5 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 96/261 (36%), Gaps = 53/261 (20%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+FL + + + + R ++ ++ F G + +++ L F+ + + +
Sbjct: 48 LFLALGWEYYMKHKDRVPLWLPVSVITFCCTGILVFS--MVEILIFTG----AASRDASN 101
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ +++LG S SR+ + + + + +++SGG +
Sbjct: 102 LDYLIVLGA--------RVKEDGLSKSLKSRLDKAI----DYLEENPGTVLVLSGGQGED 149
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK----------- 174
++E+ + L+ +GV + LET+S T +N +S I+ Q +
Sbjct: 150 EPVSEAAAMRDYLVFNGVSERQLILETRSFSTVENIAYSRIAIEEDQAERKARHARSDII 209
Query: 175 --------------NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF 220
I +++S +H+ R++ + +GI Y I S
Sbjct: 210 MEPGTYEEISDKPIRIGVLTSDFHVFRAEQIAKKWGIPDI----------YGISSESDPV 259
Query: 221 YLTELALKEYIGILIAYYRGN 241
L ++E IL GN
Sbjct: 260 LLVHFCVRECAAILKDKLVGN 280
>gi|168178023|ref|ZP_02612687.1| putative sanA protein [Clostridium botulinum NCTC 2916]
gi|182670781|gb|EDT82755.1| putative sanA protein [Clostridium botulinum NCTC 2916]
Length = 222
Score = 89.5 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 78/194 (40%), Gaps = 19/194 (9%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
I+++F + ++L I + + ++ +++P+ + I++LG
Sbjct: 2 KNKIKRMFMVIMVIVLMGTAAIFFIDFRV----RSESKKYIVNPKDVPEAEAILVLGA-- 55
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ + R+ + LYK+ K ++ SG Q + E
Sbjct: 56 -YVKPNGKLCDMLE----DRVAVGIDLYKNNKAK----KLLFSGDHGQAN-YDEVNGMKK 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ GV+++DI L+ T+++ + + K K II+V+ YHL R+ + G
Sbjct: 106 VAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKA---KKIIIVTQQYHLMRAVYIARQLG 162
Query: 197 INTKASCSDYLNAY 210
++ SD N +
Sbjct: 163 LDAYGVNSDQRNYW 176
>gi|296110975|ref|YP_003621356.1| hypothetical protein LKI_04225 [Leuconostoc kimchii IMSNU 11154]
gi|295832506|gb|ADG40387.1| hypothetical protein LKI_04225 [Leuconostoc kimchii IMSNU 11154]
Length = 317
Score = 89.5 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 82/222 (36%), Gaps = 31/222 (13%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN------IIVLLGNGTTI 78
+++ ++ + + W + L+ + + + R +S K +V+LG G
Sbjct: 98 YVTSLVIFWGWPLWRLSMPWLMLYFVYQFIRFTMSSMVYKHVTKAPMTGPLVVLGGGLVD 157
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ I + RI ++ + + ++ SGG + ++E+
Sbjct: 158 GYRVGNIVDQ-------RIQAAVKDARRLPDY---PIMVFSGGQGEDQLISEAEAMRQWA 207
Query: 139 LE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+ GV LE QS +T+QN + +S ++K GK +S YH+ R L + I
Sbjct: 208 VTTYGVPVKKTLLENQSHNTYQNLKLTSQLLK---GKAFTFYTSNYHVFRGVLLAKKQHI 264
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ Y L+E+ G++ R
Sbjct: 265 MASGRGGSVRLS-----------YQIPAFLREFAGVMSINKR 295
>gi|147677433|ref|YP_001211648.1| hypothetical protein PTH_1098 [Pelotomaculum thermopropionicum SI]
gi|146273530|dbj|BAF59279.1| uncharacterized conserved protein [Pelotomaculum thermopropionicum
SI]
Length = 148
Score = 89.5 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R LY+ + II+SG + + K +GV DI +E +S
Sbjct: 10 ERELYAAELYR----RGLAPRIIMSG------CGSAAKQMAMKAAAAGVGEQDIIVENKS 59
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN--TKASCSDYLNAYYS 212
T+QNA ++ ++ + K+ I+V+S YH++R++L F+ N K N+ ++
Sbjct: 60 GSTYQNALYTKDIVLSRGFKSAIVVTSPYHMRRARLVFERVFRNTGVKLFYCAAKNSGFN 119
Query: 213 IIPLSANFYLTELALKEYIGILIAYYR 239
++ ++ L+E+I ++ ++R
Sbjct: 120 ADGRCSSKADRQITLREWIKLVYYWFR 146
>gi|325284148|ref|YP_004256689.1| hypothetical protein Deipr_1940 [Deinococcus proteolyticus MRP]
gi|324315957|gb|ADY27072.1| protein of unknown function DUF218 [Deinococcus proteolyticus MRP]
Length = 212
Score = 89.1 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/178 (22%), Positives = 68/178 (38%), Gaps = 15/178 (8%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
PL P+ K + V+LG PA ++ R+ + LY++ H T
Sbjct: 23 PLGVPREKPHPTL-VVLGAAQYAGRPSPAFQV--------RLDHALELYRAGGVH----T 69
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I+++GG E V + L GV + +K E +S T QN +++ ++
Sbjct: 70 IVVTGGRQAGDPYTEGGVGVSYLQRRGVPAEVLKAEERSRTTAQNLNYAAELLPPHAA-- 127
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+ +V+ H R+ + G N AS S L L +Y G+
Sbjct: 128 VTVVTDRAHAPRALAMARDIGFNANASPSPLWPHASLRYRLRERLAWAAYMLLDYEGL 185
>gi|311064772|ref|YP_003971497.1| hypothetical protein BBPR_1421 [Bifidobacterium bifidum PRL2010]
gi|310867091|gb|ADP36460.1| Conserved hypothetical membrane protein [Bifidobacterium bifidum
PRL2010]
Length = 93
Score = 89.1 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 12/91 (13%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG- 173
+ +GG ++E+ L E V D + +E +S T +N +FS ++ G
Sbjct: 2 FVAAGGQGSDEVVSEAESMRRYLTESRHVPADAVLMEDRSTTTMENLRFSKEIMDARSGV 61
Query: 174 ----------KNIILVSSAYHLKRSQLYFQH 194
LV+S YH+ R+ Y
Sbjct: 62 QSVPGRRGLAYRCALVTSDYHVFRASEYAHQ 92
>gi|168183333|ref|ZP_02617997.1| putative sanA protein [Clostridium botulinum Bf]
gi|237793971|ref|YP_002861523.1| putative SanA protein [Clostridium botulinum Ba4 str. 657]
gi|182673423|gb|EDT85384.1| putative sanA protein [Clostridium botulinum Bf]
gi|229261043|gb|ACQ52076.1| putative SanA protein [Clostridium botulinum Ba4 str. 657]
Length = 222
Score = 89.1 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 82/194 (42%), Gaps = 19/194 (9%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
I++I + +++ + IG I I K ++ ++ +++P+ + I++LG
Sbjct: 2 KNKIKRILMV---IIVIALIGTAAIFFIDFK-VRSESKKYIVNPKDVPEAEAILVLGA-- 55
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ + R+ + LYK+ K ++ SG Q + E
Sbjct: 56 -YVKPNGKLCDMLE----DRVAVGIDLYKNNKAK----KLLFSGDHGQVN-YDEVNGMKK 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ GV+++DI L+ T+++ + + K K II+V+ YHL R+ + G
Sbjct: 106 VAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKA---KKIIIVTQQYHLMRAVYIARQLG 162
Query: 197 INTKASCSDYLNAY 210
++ SD N +
Sbjct: 163 LDAYGVNSDQRNYW 176
>gi|331002899|ref|ZP_08326412.1| hypothetical protein HMPREF0491_01274 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413192|gb|EGG92566.1| hypothetical protein HMPREF0491_01274 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 268
Score = 89.1 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 101/261 (38%), Gaps = 53/261 (20%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+ F+ + L+ + K + + +++ G++ I+ + L P+ +
Sbjct: 34 FAFVFFALGKLIKFYLNKRIPLWSVVSVYTLATLGVLIFIITSIVIA-----LSLPKEDE 88
Query: 65 DG-NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
G + +++LG+ Q+ R+ + + + TIIISGG
Sbjct: 89 SGLDFLIVLGS--------KPDMENEGSQAKYRLDKAI----DYIDKNPDTTIIISGG-L 135
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-------------- 169
+K + ES+ + L+E GV+ ++I +ET+S +T +N +S ++I
Sbjct: 136 RKEEIIESLEMADYLIERGVDANNILVETESHNTRENLIYSKALIDKYNVDMKRNADITI 195
Query: 170 ----------NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
+ + I ++++ +H+ R+ + G + I S N
Sbjct: 196 VNDVRSVLEVEDRPQTIGILTNDFHIFRAMHVAKKLGY----------TQVFPIRAGSNN 245
Query: 220 FYLTELALKEYIGILIAYYRG 240
+ ++E IL + G
Sbjct: 246 ILYLHMLVRETFAILKYKFLG 266
>gi|197336672|ref|YP_002157666.1| transporter [Vibrio fischeri MJ11]
gi|197313924|gb|ACH63373.1| transporter [Vibrio fischeri MJ11]
Length = 364
Score = 89.1 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 15/179 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K N I+ LG ++ I R+ T+ + K + + I+++G
Sbjct: 186 KQGKGKNAIITLGYALNPDGSMNPI-------LIDRLNATLDMAK----KNPNSYIVVTG 234
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P+ H E + + L+++G++ I + + T +NA +SS + + ++S
Sbjct: 235 GVPKNHK-TEGKLMADWLVKNGIDASRIIEDNYARSTVENALYSSYALARHNIDHATIIS 293
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
SA H++R Q F+ T + + PL T+ KE +GI R
Sbjct: 294 SASHVRRGQALFEVASWQTGPKGITFDTYSANDRPLEELKVPTD---KELLGIYRDALR 349
>gi|37677322|ref|NP_937718.1| hypothetical protein VVA1662 [Vibrio vulnificus YJ016]
gi|37201868|dbj|BAC97688.1| uncharacterized conserved protein [Vibrio vulnificus YJ016]
Length = 361
Score = 89.1 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 69/179 (38%), Gaps = 15/179 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV LG + P + + E + + + + II++G
Sbjct: 183 RQLGSNDAIVTLG-----------YALNPDGSMHDILIERLETTLAMAKANPEALIILTG 231
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G PQ H E + + L+E G+ + I E + T NA FS+ + K+ ++S
Sbjct: 232 GVPQNHK-TEGKLMADWLIERGISANRIIEENYATSTVDNALFSAYALARHGVKHATIIS 290
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
SA H++R Q F+ T + Y PL+ + E +GI R
Sbjct: 291 SASHVRRGQTLFEIATWQTGPRNITFDTVAYPDKPLNELKQASSG---ELLGIYRDALR 346
>gi|294498420|ref|YP_003562120.1| hypothetical protein BMQ_1655 [Bacillus megaterium QM B1551]
gi|294348357|gb|ADE68686.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 198
Score = 89.1 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 71/178 (39%), Gaps = 47/178 (26%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ IF + ++ F F G ++ ++P+ S ++I++L
Sbjct: 7 KRIKISIFMLGLGIIFFLFAGKELVVN----------EKPVKS-------DVIIVLSGDN 49
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
R+ + + LYK +I+S G + +
Sbjct: 50 ------------------DRLEKGIELYK----KGYAAHLILSNGQENN--------FYH 79
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ ESG+ D I LE + T +NA+F+ ++ N ++ I+VSS YH+KR++ F
Sbjct: 80 QAKESGIPEDSIILENHATSTTENAKFTKRLMMNYHFQSAIVVSSNYHMKRAEKNFNK 137
>gi|320159372|ref|YP_004191750.1| hypothetical protein VVM_03209 [Vibrio vulnificus MO6-24/O]
gi|319934684|gb|ADV89547.1| uncharacterized conserved protein [Vibrio vulnificus MO6-24/O]
Length = 361
Score = 89.1 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 69/179 (38%), Gaps = 15/179 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV LG + P + + E + + + + II++G
Sbjct: 183 RQLGSNDAIVTLG-----------YALNPDGSMHDILIERLETTLAMAKANPEALIILTG 231
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G PQ H E + + L+E G+ + I E + T NA FS+ + K+ ++S
Sbjct: 232 GVPQNHK-TEGKLMADWLIERGISANRIIEENYATSTVDNALFSAYALARHGVKHATIIS 290
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
SA H++R Q F+ T + Y PL+ + E +GI R
Sbjct: 291 SASHVRRGQTLFEIATWQTGPRNITFDTVAYPDKPLNELKQASSG---ELLGIYRDALR 346
>gi|91217293|ref|ZP_01254254.1| hypothetical protein P700755_08017 [Psychroflexus torquis ATCC
700755]
gi|91184636|gb|EAS71018.1| hypothetical protein P700755_08017 [Psychroflexus torquis ATCC
700755]
Length = 198
Score = 88.8 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 70/167 (41%), Gaps = 14/167 (8%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I +LG G + P +PA+ + S SR+ E +R+++ + ++++ +
Sbjct: 25 FIHVLGAGYNLNPDLPAL-TQLGSTSLSRLSEGIRVFR-----LLDKPVLVTSAYSKYGL 78
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+++ V +E GV I++ T + AQ S + +I+ + A H+ R
Sbjct: 79 ESQASVTRKAAIELGVSSQHIRMLENPSTTLEEAQAFKS--RFGTSAQVIIATDAMHMSR 136
Query: 188 SQLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALK 228
+ ++ G A+ +++ + +P +F L+ +
Sbjct: 137 AMDIYRDLGYEPIAAPTNFQVHFGPKAYNGLSMPSYQSFQLSNRIFR 183
>gi|328469464|gb|EGF40410.1| hypothetical protein VP10329_11286 [Vibrio parahaemolyticus 10329]
Length = 365
Score = 88.8 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 69/175 (39%), Gaps = 15/175 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ IV LG + P + + E + + + + II++GG P+
Sbjct: 191 NKGAIVTLG-----------YALNPDGSMHQILVERLETTLAMAKANPDAIIILTGGVPK 239
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
H E + + L+E GV +D I E + T NA FSS + K+ ++SSA H
Sbjct: 240 NHK-TEGKLMADWLIEKGVSKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASH 298
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++R Q F+ T + Y PL +E E +GI R
Sbjct: 299 VRRGQTLFEIASWQTGPQGITFDTVSYPDKPLKDLAKASES---ELLGIYRDALR 350
>gi|319947862|ref|ZP_08022049.1| hypothetical protein ES5_00997 [Dietzia cinnamea P4]
gi|319438468|gb|EFV93401.1| hypothetical protein ES5_00997 [Dietzia cinnamea P4]
Length = 205
Score = 88.8 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 73/218 (33%), Gaps = 27/218 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R + ++ LL + G I + + + + IV+LG
Sbjct: 3 RAVSWVLTIALLLCLVIPGFIAFRVWH---------VARIDDRTPADAIVVLGAAQYNGV 53
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P + +R+ L+ + II GG E+ L
Sbjct: 54 PTPVFQ--------ARLEHAALLH----DEGVAPQIITVGGGQPGDLYTEAGSGRAYLTR 101
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV + + +T + + +++ G++++LVS H RS++ + G++
Sbjct: 102 LGVPPEAVLAVETGTNTEGSLDAVAQTVRDQGGQSVVLVSDPTHSYRSRMMARDAGLDAW 161
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
S + + A ++ ++E +L Y
Sbjct: 162 TSPTRHGPAVWTRE------NQIMSIIRETGAVLWYQY 193
>gi|229838045|ref|ZP_04458204.1| putative exported protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229694411|gb|EEO84458.1| putative exported protein [Yersinia pestis biovar Orientalis str.
PEXU2]
Length = 375
Score = 88.8 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 12/152 (7%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
N IV LG T+ + I+ R+ +T+ + + II++GG PQ +
Sbjct: 203 NAIVTLGYALNPDGTMNDVLIQ-------RLEKTLEIAQQL----PDALIIVTGGVPQNN 251
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E + + L++ G++ + I + + T +NA +S + + KN I++SS H++
Sbjct: 252 -QTEGKLMADWLIKKGIKPERIYQDNYARSTVENALYSRYALAKHRIKNAIIISSGSHVR 310
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
R+ F + ++L PLS
Sbjct: 311 RADALFTIASWESGPHDINFLTIAALDKPLSE 342
>gi|148974941|ref|ZP_01811921.1| hypothetical protein VSWAT3_25489 [Vibrionales bacterium SWAT-3]
gi|145965450|gb|EDK30699.1| hypothetical protein VSWAT3_25489 [Vibrionales bacterium SWAT-3]
Length = 365
Score = 88.8 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+ + +L L+ S + LL D IV LG + P + +
Sbjct: 169 FATVDRVLETPLKESAGKGLLD-----DHGAIVTLG-----------YALNPDGSMHQIL 212
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E + + + + I+++GG P+ H E + + L+E GV +D I E + T
Sbjct: 213 IERLETTLAMAKANPDAMIVLTGGVPKNHK-TEGKLMADWLIEKGVSKDRIIEENYATST 271
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
NA FSS + K+ ++SSA H++R Q F+ T + Y PL+
Sbjct: 272 VGNALFSSYALARHNIKHATIISSASHVRRGQTLFEVASWQTGPQGITFDTVSYPDKPLA 331
Query: 218 ANFYLTELALKEYIGILIAYYR 239
++ E +GI R
Sbjct: 332 DLKKASDG---ELLGIYRDALR 350
>gi|22125571|ref|NP_668994.1| hypothetical protein y1676 [Yersinia pestis KIM 10]
gi|45442116|ref|NP_993655.1| hypothetical protein YP_2326 [Yersinia pestis biovar Microtus str.
91001]
gi|51596866|ref|YP_071057.1| hypothetical protein YPTB2547 [Yersinia pseudotuberculosis IP
32953]
gi|108807998|ref|YP_651914.1| hypothetical protein YPA_2003 [Yersinia pestis Antiqua]
gi|108812268|ref|YP_648035.1| hypothetical protein YPN_2106 [Yersinia pestis Nepal516]
gi|145599203|ref|YP_001163279.1| hypothetical protein YPDSF_1923 [Yersinia pestis Pestoides F]
gi|149365580|ref|ZP_01887615.1| putative exported protein [Yersinia pestis CA88-4125]
gi|153948076|ref|YP_001400474.1| hypothetical protein YpsIP31758_1496 [Yersinia pseudotuberculosis
IP 31758]
gi|162421029|ref|YP_001606261.1| hypothetical protein YpAngola_A1772 [Yersinia pestis Angola]
gi|165925576|ref|ZP_02221408.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165937616|ref|ZP_02226178.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166008093|ref|ZP_02228991.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213796|ref|ZP_02239831.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398638|ref|ZP_02304162.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422234|ref|ZP_02313987.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426954|ref|ZP_02318707.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167466398|ref|ZP_02331102.1| hypothetical protein YpesF_00560 [Yersinia pestis FV-1]
gi|170023842|ref|YP_001720347.1| hypothetical protein YPK_1601 [Yersinia pseudotuberculosis YPIII]
gi|186895947|ref|YP_001873059.1| hypothetical protein YPTS_2642 [Yersinia pseudotuberculosis PB1/+]
gi|218929600|ref|YP_002347475.1| hypothetical protein YPO2511 [Yersinia pestis CO92]
gi|229895244|ref|ZP_04510418.1| putative exported protein [Yersinia pestis Pestoides A]
gi|229898605|ref|ZP_04513750.1| putative exported protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229902604|ref|ZP_04517721.1| putative exported protein [Yersinia pestis Nepal516]
gi|270490215|ref|ZP_06207289.1| tetratricopeptide repeat protein [Yersinia pestis KIM D27]
gi|294504263|ref|YP_003568325.1| hypothetical protein YPZ3_2153 [Yersinia pestis Z176003]
gi|21958474|gb|AAM85245.1|AE013770_11 hypothetical [Yersinia pestis KIM 10]
gi|45436979|gb|AAS62532.1| putative exported protein [Yersinia pestis biovar Microtus str.
91001]
gi|51590148|emb|CAH21785.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
gi|108775916|gb|ABG18435.1| hypothetical protein YPN_2106 [Yersinia pestis Nepal516]
gi|108779911|gb|ABG13969.1| hypothetical protein YPA_2003 [Yersinia pestis Antiqua]
gi|115348211|emb|CAL21139.1| putative exported protein [Yersinia pestis CO92]
gi|145210899|gb|ABP40306.1| hypothetical protein YPDSF_1923 [Yersinia pestis Pestoides F]
gi|149291993|gb|EDM42067.1| putative exported protein [Yersinia pestis CA88-4125]
gi|152959571|gb|ABS47032.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
31758]
gi|162353844|gb|ABX87792.1| conserved hypothetical protein [Yersinia pestis Angola]
gi|165914366|gb|EDR32981.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165922685|gb|EDR39836.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165992475|gb|EDR44776.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204970|gb|EDR49450.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958740|gb|EDR55761.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167051142|gb|EDR62550.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054056|gb|EDR63884.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169750376|gb|ACA67894.1| protein of unknown function DUF218 [Yersinia pseudotuberculosis
YPIII]
gi|186698973|gb|ACC89602.1| protein of unknown function DUF218 [Yersinia pseudotuberculosis
PB1/+]
gi|229680051|gb|EEO76150.1| putative exported protein [Yersinia pestis Nepal516]
gi|229688153|gb|EEO80224.1| putative exported protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229701730|gb|EEO89755.1| putative exported protein [Yersinia pestis Pestoides A]
gi|262362382|gb|ACY59103.1| hypothetical protein YPD4_2196 [Yersinia pestis D106004]
gi|262366310|gb|ACY62867.1| hypothetical protein YPD8_2190 [Yersinia pestis D182038]
gi|270338719|gb|EFA49496.1| tetratricopeptide repeat protein [Yersinia pestis KIM D27]
gi|294354722|gb|ADE65063.1| hypothetical protein YPZ3_2153 [Yersinia pestis Z176003]
gi|320014659|gb|ADV98230.1| putative exported protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 375
Score = 88.8 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 12/152 (7%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
N IV LG T+ + I+ R+ +T+ + + II++GG PQ +
Sbjct: 203 NAIVTLGYALNPDGTMNDVLIQ-------RLEKTLEIAQQL----PDALIIVTGGVPQNN 251
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E + + L++ G++ + I + + T +NA +S + + KN I++SS H++
Sbjct: 252 -QTEGKLMADWLIKKGIKPERIYQDNYARSTVENALYSRYALAKHRIKNAIIISSGSHVR 310
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSA 218
R+ F + ++L PLS
Sbjct: 311 RADALFTIASWESGPHDINFLTIAALDKPLSE 342
>gi|27367521|ref|NP_763048.1| hypothetical protein VV2_1137 [Vibrio vulnificus CMCP6]
gi|27359093|gb|AAO08038.1|AE016812_20 Uncharacterized conserved protein [Vibrio vulnificus CMCP6]
Length = 361
Score = 88.4 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 15/179 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV LG + P + + E + + + + II++G
Sbjct: 183 RQLGRNDAIVTLG-----------YALNPDGSMHDILIERLETTLTMAKANPEALIILTG 231
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G PQ H E + + L+E G+ + I E + T NA FS+ + K+ ++S
Sbjct: 232 GVPQNHK-TEGKLMADWLIERGISANRIIEENYATSTVDNALFSAYALARHGVKHATIIS 290
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
SA H++R Q F+ T + Y PL+ + + E +GI R
Sbjct: 291 SASHVRRGQTLFEIATWQTGPRNITFDTVAYPDKPLNELKHASSG---ELLGIYRDALR 346
>gi|300865454|ref|ZP_07110248.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300336546|emb|CBN55398.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 267
Score = 88.4 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 41/239 (17%), Positives = 88/239 (36%), Gaps = 32/239 (13%)
Query: 4 SWIFLIVSYWHLLCQSI----RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
++ L++++ +L + R IF + + + + IG I + Y P
Sbjct: 32 TFCLLLITFDSMLSKWFLLQGRSIFLLLIGLAILTPIGLNYYVKIFTNS--YRYNDPANI 89
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P N+ ++ G G T PS R+ + LYK + I+++
Sbjct: 90 PPE----NVAIVFGAGVWADGT-------PSPMLADRVQAAVDLYKLGRIR----KILMT 134
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + + E E GV DI L+ T+++ + + K +L+
Sbjct: 135 GDNSSPY-YNEVKAMMIYAEEKGVPNSDITLDYAGFSTYESCYRAKEI---FGVKQAVLI 190
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ +YHL R+ + G+ + + N + + +++E ++ A +
Sbjct: 191 TQSYHLPRAVYTCRALGVEAVGLGTPDWGKF-------RNNSMIQYSVREVFAVVKALW 242
>gi|302385322|ref|YP_003821144.1| protein of unknown function DUF218 [Clostridium saccharolyticum
WM1]
gi|302195950|gb|ADL03521.1| protein of unknown function DUF218 [Clostridium saccharolyticum
WM1]
Length = 274
Score = 88.4 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 34/224 (15%), Positives = 87/224 (38%), Gaps = 43/224 (19%)
Query: 1 MLLSWIFLIVSY-WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
++ + + +++ W + KI ++ + GI+ ++++ L F+ ++
Sbjct: 34 LMFAAVCILLPLGWETYVKHKEKIPLWIPVSVI-TMCCTGILVFMVVEFLVFTG----VA 88
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ + + +++LG S R+ + + + +++S
Sbjct: 89 ARDASNLDYVIVLGA--------RVKETGISKSLKKRLDKAIE----YADENPSVILVLS 136
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---- 175
GG ++E+ + L+ +GV + + LET+S T +N +S I+ Q +
Sbjct: 137 GGQGADEPVSEAAAMRDYLVFNGVNEEQLILETRSTSTVENIAYSRVAIEEDQAERKARR 196
Query: 176 ---------------------IILVSSAYHLKRSQLYFQHFGIN 198
I +++S +H+ R+Q + +GI
Sbjct: 197 QNNPIFMEPGTFAEVPDKPIKIGVLTSDFHVYRAQQIGKKWGIP 240
>gi|219668605|ref|YP_002459040.1| hypothetical protein Dhaf_2577 [Desulfitobacterium hafniense DCB-2]
gi|219538865|gb|ACL20604.1| protein of unknown function DUF218 [Desulfitobacterium hafniense
DCB-2]
Length = 223
Score = 88.4 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 70/190 (36%), Gaps = 17/190 (8%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIP-TILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ I + +++F G ++ + Y + P + I++LG
Sbjct: 2 KTKVIRLLQLLVIVFLVGGLSVLSINFYVHSFSAKYIVTMDKP--LPQTDAILVLGA--- 56
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+PS R+ +Y + II+SG +K E +
Sbjct: 57 ---YFNPNTGKPSDMLGDRLETAYEVY----TKNPDTKIIVSGDHGRKE-YDEVNGMKDY 108
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ GV + I ++ T+++ + + + +++I+V+ YHL R+ + GI
Sbjct: 109 LMAKGVPDEHIFMDHAGFSTYESMYRAKEIFQ---VQSLIVVTQDYHLYRAIFDSRKMGI 165
Query: 198 NTKASCSDYL 207
+ +D
Sbjct: 166 ESYGVIADKR 175
>gi|261407512|ref|YP_003243753.1| hypothetical protein GYMC10_3711 [Paenibacillus sp. Y412MC10]
gi|261283975|gb|ACX65946.1| protein of unknown function DUF218 [Paenibacillus sp. Y412MC10]
Length = 210
Score = 88.4 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 12/139 (8%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ ++LG + +PS RI + LY +I +GG +
Sbjct: 53 DAAIVLGAAV--------WKGKPSPVFQGRIDHALWLYDQQYVD----KLIFTGGRGSEE 100
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+AES +E GV DI +ET S T QN +++ + + ++VS H+K
Sbjct: 101 EVAESEAAKQYAIEHGVPERDILVETSSTITEQNLYYANKIGDAAGLSSYLIVSDPLHMK 160
Query: 187 RSQLYFQHFGINTKASCSD 205
R+ + G+ S +
Sbjct: 161 RAMAMAEDMGLEANPSPAS 179
>gi|260777035|ref|ZP_05885929.1| hypothetical protein VIC_002425 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260606701|gb|EEX32975.1| hypothetical protein VIC_002425 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 365
Score = 88.0 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 44/202 (21%), Positives = 77/202 (38%), Gaps = 20/202 (9%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+ + +L L+ S + L D IV LG + P + +
Sbjct: 169 FETVDRVLATPLKDSADKGKLD-----DKGAIVTLG-----------YALNPDGSMHEIL 212
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ + + + + I+++GG P+ H E + + L+ GV +D I E + T
Sbjct: 213 IQRLETTLAMAKANPDALIVLTGGVPKNHK-TEGKLMADWLISKGVSKDRIIEENYATST 271
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
NA FSS + K+ ++SSA H++R Q F+ T + Y PL
Sbjct: 272 VGNALFSSYALARHGIKHATIISSASHVRRGQTLFEVASWQTGPQGITFDTVGYPDKPLK 331
Query: 218 ANFYLTELALKEYIGILIAYYR 239
++ E +GI R
Sbjct: 332 ELAKASDS---ELLGIYRDALR 350
>gi|68535690|ref|YP_250395.1| putative secreted protein [Corynebacterium jeikeium K411]
gi|68263289|emb|CAI36777.1| putative secreted protein [Corynebacterium jeikeium K411]
Length = 213
Score = 88.0 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 34/224 (15%), Positives = 76/224 (33%), Gaps = 27/224 (12%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ K F++ + G + + H S ++ + I +LG
Sbjct: 9 RRPVKRAVKYVFITLLTIFLVAAGVFGVTAFQVWHFARS--------DDRRPADTIFVLG 60
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
P+ SR+ LY+ + TI+ GG + E+
Sbjct: 61 A--------AQYAGNPTNWFASRLNHAAELYEQ----GVAPTIVTVGGKAEGDLYTEAAA 108
Query: 134 YNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
N L+E+ + + + DT ++A+ + + + + ++V+ H R+
Sbjct: 109 GKNYLVENFDIPESAVVPVEEGADTLKSAEAFAQVADDNGWRTSVVVTDPAHSLRATRMV 168
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ G+ AS + + ++ + L E +G+L
Sbjct: 169 RDQGLEAWASPTRQGPSVFTRKSQA------NSILHETLGMLYY 206
>gi|94264712|ref|ZP_01288492.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93454821|gb|EAT05071.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 96
Score = 88.0 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSI 213
+NA +++ ++ ++LV+SA H+ RS F+ GIN + +D+ +
Sbjct: 11 ENALYTAPLVGKH---PVLLVTSAQHMPRSLATFRAVGINAVPAPTDFEVIPQPLHPLRL 67
Query: 214 IPLSANFYLTELALKEYIGILIAYYRG 240
+P + + + + ALKEY+G+L+ RG
Sbjct: 68 LPDAHSLHQSTSALKEYLGLLVYRLRG 94
>gi|322804976|emb|CBZ02535.1| sana protein [Clostridium botulinum H04402 065]
Length = 222
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 77/194 (39%), Gaps = 19/194 (9%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+++I + ++L I + + ++ +++P+ + I++LG
Sbjct: 2 KNKMKRILVVIMAIVLMGTAAIFFIDFRV----RSESKKYIVNPKDVPEAEAILVLGA-- 55
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ + R+ + LYK+ K ++ SG Q + E
Sbjct: 56 -YVKPNGKLCDMLE----DRVAVGIDLYKNNKAK----KLLFSGDHGQVN-YDEVNGMKK 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ GV+++DI L+ T+++ + + K K II+V+ YHL R+ + G
Sbjct: 106 VAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKA---KKIIIVTQQYHLMRAVYIARKLG 162
Query: 197 INTKASCSDYLNAY 210
++ SD N +
Sbjct: 163 LDAYGVNSDQRNYW 176
>gi|167746537|ref|ZP_02418664.1| hypothetical protein ANACAC_01247 [Anaerostipes caccae DSM 14662]
gi|317471356|ref|ZP_07930711.1| DUF218 domain-containing protein [Anaerostipes sp. 3_2_56FAA]
gi|167653497|gb|EDR97626.1| hypothetical protein ANACAC_01247 [Anaerostipes caccae DSM 14662]
gi|316901162|gb|EFV23121.1| DUF218 domain-containing protein [Anaerostipes sp. 3_2_56FAA]
Length = 228
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 70/194 (36%), Gaps = 22/194 (11%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILL-----KHLQFSYQRPLLSPQWKKDGNIIVL 71
+ + +L+F+ I + K ++ + R L Q K + +V+
Sbjct: 4 KRKRWSRWLKLLLILIFAGILTAGGINWFMIHQSKKDIETA--RQLALEQKGKKADAVVV 61
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG ++ R+ ++ YK + II+SG D G E
Sbjct: 62 LGAKVRKDGSM-------CLMLKERVDLGIQAYKQ----GLADRIIMSG-DHGAEGYDEV 109
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
++ G+ + I + T++ + + K K+I++V+ YHL R+
Sbjct: 110 STMKAYAIKQGIPSEHIFKDHAGFSTYETMYRARDVFKA---KSIVVVTQKYHLYRAVYD 166
Query: 192 FQHFGINTKASCSD 205
+ G+ K D
Sbjct: 167 AKALGLEVKGISCD 180
>gi|134103151|ref|YP_001108812.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338]
gi|133915774|emb|CAM05887.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338]
Length = 196
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 18/178 (10%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII---VLLGNGTTIIPTIPAIRI 87
+G + +L LQ++ R + +D ++LG G
Sbjct: 5 WWLVALGGFALAAFVLLPLQWALARSAGRIRTAEDVPATEFGLVLGAGVRYD-------G 57
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
PS R+ + L+++ + +I+SG P G +E +V + L+ GV +D
Sbjct: 58 RPSRILQGRLNVALALHRAGRVR----RLIVSG-SPHSRGYSEPVVMRDYLVARGVPPED 112
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+ L+ +DT +A+ ++ + + I +V++ +HL+RS F+ GI+T D
Sbjct: 113 VLLDESGVDTCSSARAAA---RTFGLRAITVVTTNFHLRRSVALFRRAGIDTYGVGHD 167
>gi|330448460|ref|ZP_08312108.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492651|dbj|GAA06605.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 365
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/175 (23%), Positives = 68/175 (38%), Gaps = 15/175 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D IV LG + P + + E + + + + I+++GG P
Sbjct: 191 DKGAIVTLG-----------YALNPDGSMHPILVERLETTLAMAKANPDALIVLTGGVPM 239
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
H E + + L+E G+ +D I E + T NA FSS + K+ ++SSA H
Sbjct: 240 NHK-TEGKLMADWLIEKGINKDRIIEENYATSTVDNALFSSYALARHHIKHATIISSASH 298
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++R Q F+ T + Y PL ++ E +GI R
Sbjct: 299 VRRGQTLFEIASWQTGPQNITFDTVSYPDKPLKELTTPSDS---ELLGIYRDALR 350
>gi|269127423|ref|YP_003300793.1| hypothetical protein Tcur_3216 [Thermomonospora curvata DSM 43183]
gi|268312381|gb|ACY98755.1| protein of unknown function DUF218 [Thermomonospora curvata DSM
43183]
Length = 244
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/215 (19%), Positives = 78/215 (36%), Gaps = 20/215 (9%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQ-RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
++L + GI+ ++L L ++ + IV+LG P +R
Sbjct: 33 WLLWTVAVLLGILAVVVLTPLTVGWRVWYQARQDETPKSDAIVVLGAAQYNGVPSPTLRW 92
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL-ESGVERD 146
R+ ++LY+ + I+ GG E+ N L+ E V D
Sbjct: 93 --------RLEHAVKLYR----RGVAPAIVTVGGKQPGDNYTEADAGRNWLIKERQVPAD 140
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+ DT ++ Q + + ++ + +LV+ +H RS+ Q GI AS +
Sbjct: 141 KVVAVPVGSDTLESMQAVGAKFRELKWHSAVLVTDPWHGLRSKKMAQDQGIKAAASPT-- 198
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + Y+ ++E G L G
Sbjct: 199 RSGPSVQTRDTQFHYI----VRETGGYLSYVLFGR 229
>gi|255513632|gb|EET89897.1| protein of unknown function DUF218 [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 295
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 16/137 (11%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ IIV LG + + +S + + L K + + I+ SGG
Sbjct: 71 RGNTIIVALG-------KEISQGGSLTCESKKIVEHAVLLLKEGRAKA----ILFSGGWS 119
Query: 124 QKHG----LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIIL 178
KH L ES + G + E +S+DT NA +SS +I+ M+G K I+L
Sbjct: 120 FKHRRKPRLTESEGMRRYAVSLGAPASALITEKRSMDTIGNALYSSKIIRKMRGTKRILL 179
Query: 179 VSSAYHLKRSQLYFQHF 195
V+ AYH+ R+ F+
Sbjct: 180 VAVAYHMPRASYIFRKA 196
>gi|258622260|ref|ZP_05717286.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258624327|ref|ZP_05719276.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|262173068|ref|ZP_06040745.1| TPR repeat-containing protein [Vibrio mimicus MB-451]
gi|258583478|gb|EEW08278.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258585584|gb|EEW10307.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|261890426|gb|EEY36413.1| TPR repeat-containing protein [Vibrio mimicus MB-451]
Length = 363
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 68/183 (37%), Gaps = 15/183 (8%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ Q IV LG + P + + + + + + + I
Sbjct: 181 AEATQKLGQDGAIVTLG-----------YALNPDGSMHEILVKRLETTLAMAKANPEAMI 229
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I++GG PQ H E + + L+E GV I E + T NA FSS + K+
Sbjct: 230 ILTGGVPQNHK-TEGKLMADWLIERGVSATRIIEENYATSTVDNALFSSYALARHGIKHA 288
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++SSA H++R Q F+ T + Y PL+ + E +GI
Sbjct: 289 TIISSASHVRRGQTLFEVASWQTGPKGITFDTVSYPDKPLNELEKASSG---ELLGIYRD 345
Query: 237 YYR 239
R
Sbjct: 346 ALR 348
>gi|159901379|ref|YP_001547626.1| hypothetical protein Haur_4868 [Herpetosiphon aurantiacus ATCC
23779]
gi|159894418|gb|ABX07498.1| protein of unknown function DUF218 [Herpetosiphon aurantiacus ATCC
23779]
Length = 202
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 80/222 (36%), Gaps = 28/222 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
Q +R+ L + + + I+ + Q + RP+ + +++LG
Sbjct: 6 KQWLRRSIRGLLASLCLAAVIFISTGYIVYRQAQRAELRPV---------DALLVLGAAQ 56
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
P + +R+ E +RLY+ II+SGG +E+ V +
Sbjct: 57 WDGEPSPVLE--------ARLTEAIRLYRLGYAR----RIIVSGGTGLNDTRSEASVAYD 104
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+E ++ I Q DT ++ Q ++++V+ HL R+ +G
Sbjct: 105 YLIEHSIDPTLIISVAQGSDTRSTLLAVHDEMQRQQIDSLLIVTDPPHLLRALKMAHDYG 164
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
I + + + + N+ + +E + L
Sbjct: 165 ITSFGAPVKANSP-------TTNWASIKATSREALAYLAYVL 199
>gi|262403290|ref|ZP_06079850.1| TPR repeat-containing protein [Vibrio sp. RC586]
gi|262350789|gb|EEY99922.1| TPR repeat-containing protein [Vibrio sp. RC586]
Length = 363
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 69/179 (38%), Gaps = 15/179 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + IV LG + P + + + + + + + II++G
Sbjct: 185 QKLGEDGAIVTLG-----------YALNPDGSMHEILIKRLETTLAMAKANPDAVIILTG 233
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G PQ H E + + L+E GV I E + T NA FSS + K+ ++S
Sbjct: 234 GVPQNHK-TEGKLMADWLIERGVSTTRIIEENYATSTVDNALFSSYALARHGIKHATIIS 292
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
SA H++R Q F+ T + Y PL+ ++ E +GI R
Sbjct: 293 SASHVRRGQTLFEIASWQTGPKGITFDTVSYPDKPLNELEKVSSG---ELLGIYRDALR 348
>gi|160941542|ref|ZP_02088874.1| hypothetical protein CLOBOL_06440 [Clostridium bolteae ATCC
BAA-613]
gi|158435507|gb|EDP13274.1| hypothetical protein CLOBOL_06440 [Clostridium bolteae ATCC
BAA-613]
Length = 238
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 74/195 (37%), Gaps = 20/195 (10%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+L ++++ + + LF F+ I +++ + D + I++LG
Sbjct: 5 AILKKAVKILLVLGLAGCLFLFL----INLYMIRK-EKPNIISSDDAAALGDVDCIMVLG 59
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
T PS R+ + + LY+ + +++SG D + E
Sbjct: 60 CSVRPDGT-------PSGMLRDRLDKGIELYED----GVSDRLLMSG-DHGRKNYDEVNR 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
++ G+ DI ++ T+++ + + + K II+V+ YH+ R+ Q
Sbjct: 108 MKQYAIDEGIPSGDIFMDHAGFSTYESMYRARDIFQ---VKKIIIVTQRYHMYRALYVAQ 164
Query: 194 HFGINTKASCSDYLN 208
G+ SD
Sbjct: 165 AMGMEAYGVESDPRQ 179
>gi|86739984|ref|YP_480384.1| hypothetical protein Francci3_1277 [Frankia sp. CcI3]
gi|86566846|gb|ABD10655.1| protein of unknown function DUF218 [Frankia sp. CcI3]
Length = 245
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/226 (15%), Positives = 78/226 (34%), Gaps = 28/226 (12%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W+ + + ++ +L GI+ ++ LQ + + + +++V+L
Sbjct: 34 WYRVPWWRWMMRAVAAVLL-------GIMVLAVVTFLQVWW---VGREDHRPRSDVLVVL 83
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G PS +R+ + LY+ + +I GG E
Sbjct: 84 GA--------SQYDGRPSAVLAARLDHVLELYRE----GIAPQVITVGGKQPGDRYTEGE 131
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
L + G+ D + + + +T + + ++ + +LV+ +H RS+
Sbjct: 132 ASATYLRQRGIPPDRVLVLPEGSNTLGSLTAVAGLMNSRHWHTAVLVTDPWHSLRSRTMA 191
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ G++ S +D A + ++E IG
Sbjct: 192 RDLGVDAVTSPADRGPAVHGFGTQVRYI------IREGIGYRWYQL 231
>gi|319954081|ref|YP_004165348.1| hypothetical protein Celal_2563 [Cellulophaga algicola DSM 14237]
gi|319422741|gb|ADV49850.1| protein of unknown function DUF218 [Cellulophaga algicola DSM
14237]
Length = 186
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 84/215 (39%), Gaps = 34/215 (15%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
++ ++I+ +LL F G Y + +K +I V+LGN
Sbjct: 2 KNRKQIYKFVISILLIWFFG------------HIMYITIDGLTKNEKTADIAVILGNKVN 49
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
T+ S + R+ +RL+++ + II+SGG K G E
Sbjct: 50 EDGTL-------SERLEKRLQCGLRLFQNGQVK----KIIVSGGLG-KEGFYEGNKMKAY 97
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L++ V + ++ +T + + ++ ++II+VS +HL R+++ F+ G+
Sbjct: 98 LIKKNVPDSLVIIDNFGNNTLATVHNTIKLKDSLNFESIIVVSQYFHLTRTKMLFRKQGL 157
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+S S P F +E++
Sbjct: 158 KNISSAS----------PEYFEFRDFYSLFREFVA 182
>gi|51893168|ref|YP_075859.1| hypothetical protein STH2030 [Symbiobacterium thermophilum IAM
14863]
gi|51856857|dbj|BAD41015.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 225
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 72/186 (38%), Gaps = 16/186 (8%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP-LLSPQWKKDGNIIVLLGNGTTIIPTI 82
F L + G + + L + R +++ + + ++LG G
Sbjct: 7 FARGLARWLVRLLAVGTAAVLAINALVYFPGRSRIITADAARPAQVALVLGAGVYAD--- 63
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
P+ R+ + LY++ K +++SG D + E L E G
Sbjct: 64 ----GRPTPMLRDRLETALALYEAGKAR----KLLLSG-DHSRPDYDEVNAMRRYLQERG 114
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V +D+ L+ DT+ + ++++ + ++I+V+ +HL R+ G++ +
Sbjct: 115 VPPEDLFLDHAGFDTYDSMYRAAAIFQ---VDDVIVVTQGFHLPRALWIAARLGLDAQGV 171
Query: 203 CSDYLN 208
+D
Sbjct: 172 AADQRR 177
>gi|295106209|emb|CBL03752.1| Uncharacterized membrane protein [Gordonibacter pamelaeae 7-10-1-b]
Length = 214
Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 15/141 (10%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ IV+LG T PS R+ + + LY++ +I+SG D
Sbjct: 42 ADAIVVLGASVFADGT-------PSGILQDRLDDGIALYRA----GAAPKMIMSG-DNST 89
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
E + + GV +DI + T+++ + + + I++ + YHL
Sbjct: 90 VSYNEVKAMKDYAIAQGVPSEDIFCDHAGFSTYESMYRAKHV---FGAERIVVATQTYHL 146
Query: 186 KRSQLYFQHFGINTKASCSDY 206
R+ Q G+ SDY
Sbjct: 147 YRALYSAQGLGVEALGVPSDY 167
>gi|262164725|ref|ZP_06032463.1| hypothetical protein VMA_001169 [Vibrio mimicus VM223]
gi|262027105|gb|EEY45772.1| hypothetical protein VMA_001169 [Vibrio mimicus VM223]
Length = 363
Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 67/183 (36%), Gaps = 15/183 (8%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ Q IV LG + P + + + + + + I
Sbjct: 181 AEATQKLGQDGAIVTLG-----------YALNPDGSMHEILVKRLETTLEMAKANPDAMI 229
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I++GG PQ H E + + L+E GV I E + T NA FSS + K+
Sbjct: 230 ILTGGVPQNHK-TEGKLMADWLIERGVSATRIIEENYATSTVDNALFSSYALARHGIKHA 288
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++SSA H++R Q F+ T + Y PL+ + E +GI
Sbjct: 289 TIISSASHVRRGQTLFEVASWQTGPKGITFDTVSYPDKPLNELEKASSG---ELLGIYRD 345
Query: 237 YYR 239
R
Sbjct: 346 ALR 348
>gi|255065363|ref|ZP_05317218.1| putative SanA protein [Neisseria sicca ATCC 29256]
gi|255050188|gb|EET45652.1| putative SanA protein [Neisseria sicca ATCC 29256]
Length = 224
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 90/232 (38%), Gaps = 30/232 (12%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
Y+HL + K + +L F+ ++P ++ +Q L + + V+
Sbjct: 20 YFHLFRIRMFKKALVFILVLFFTA---ALLPLWIMW---RDFQVSRLDADTVRPADAAVV 73
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
L T + +R+ + LY++ K +++SGG + A
Sbjct: 74 L-------STRSYEGGRLNPCLVARVEAAVELYRAGKVK----KLVMSGGLSRDFQSASG 122
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ GV ++DI E ++ +TF+N FS I+N +++VS+ +HL R+Q+
Sbjct: 123 N-MQAIAEKMGVSKEDIIQERRAENTFENIVFSRDFIENSP--RVVIVSAGFHLARAQMM 179
Query: 192 FQH--FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
G + + + + + Y + L+E + +G
Sbjct: 180 ADRQWQGHDIQVYAAPFCSEPYGGYGFT--------VLRESAAFVKNALKGR 223
>gi|326802974|ref|YP_004320792.1| hypothetical protein HMPREF9243_0445 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651445|gb|AEA01628.1| putative membrane protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 345
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/242 (19%), Positives = 96/242 (39%), Gaps = 25/242 (10%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L+ ++V H + ++ ++ + F+ + +L+ L S + L +
Sbjct: 103 LAVFLILVGLVHYYVRFNPELMADKHWLHILDFVVAYYV-LLLINFLVNSLR--LWLIED 159
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI-IISGG 121
+ + I++LG + S R+ + K H I I+SG
Sbjct: 160 DRKQDYIIILGC-------LFNSDNTVSQMLKLRLDACLAYVGRQKFLYHHIPILIVSGA 212
Query: 122 DPQKHGL-AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
++ +E+ V L G+ + I E Q+ +T N +S +I+ +Q +I
Sbjct: 213 ATVENSECSEADVMAQYLKSQGIPEEKIWREDQATNTHGNFAYSKQLIERIQPVKSAHIA 272
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++SA+HL RSQLY G+ + + + L + ++E++ IL +
Sbjct: 273 FITSAFHLYRSQLYANLEGLY-------QVTGFGAKTTLRESVKH---GIREFVAILFMH 322
Query: 238 YR 239
+
Sbjct: 323 RK 324
>gi|269959273|ref|ZP_06173657.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835975|gb|EEZ90050.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 365
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/202 (21%), Positives = 77/202 (38%), Gaps = 20/202 (9%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+ + +L L+ + L D IV LG + P + +
Sbjct: 169 FDTVDRVLATPLKERADKGKLD-----DKGAIVTLG-----------YALNPDGSMHQIL 212
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E + + + + I+++GG P+ H E + + L+E G+ +D I E + T
Sbjct: 213 VERLETTLAMAKANPDALIVLTGGVPKNHK-TEGKLMADWLIEKGISKDRIIEENYATST 271
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
NA FSS + K+ ++SSA H++R Q F+ T + Y PL
Sbjct: 272 VGNALFSSYALARHNIKHATIISSASHVRRGQTLFEIASWQTGPQGITFDTVSYPDKPLK 331
Query: 218 ANFYLTELALKEYIGILIAYYR 239
++ E +GI R
Sbjct: 332 DLAKASDG---ELLGIYRDALR 350
>gi|257055414|ref|YP_003133246.1| hypothetical protein Svir_13720 [Saccharomonospora viridis DSM
43017]
gi|256585286|gb|ACU96419.1| uncharacterized conserved protein [Saccharomonospora viridis DSM
43017]
Length = 210
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 67/182 (36%), Gaps = 18/182 (9%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ + + IV+LG PS +R+ +LY + + I
Sbjct: 34 VARADERPRVDAIVVLGA--------AQYNGRPSEIFQARLDHARQLY----EEGVADVI 81
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+ +GG E+ N L+ GV + + DT ++ + ++ +++ ++
Sbjct: 82 VTTGGMRDGDAYTEAEAGANWLVSQGVPVEATLPVGEGSDTLRSLRAAAVVLRERDWNDV 141
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+LVS +H R+++ + G++ S + + + L+E +L
Sbjct: 142 VLVSDPWHSLRAKIMAEDAGLSVWTSPTHSGPIVQTRSTQARYI------LRETAALLYY 195
Query: 237 YY 238
Sbjct: 196 RL 197
>gi|170760763|ref|YP_001786003.1| putative sanA protein [Clostridium botulinum A3 str. Loch Maree]
gi|169407752|gb|ACA56163.1| putative SanA protein [Clostridium botulinum A3 str. Loch Maree]
Length = 222
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 77/194 (39%), Gaps = 19/194 (9%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+++I + ++L I + + ++ +++P+ + I++LG
Sbjct: 2 KNKMKRILTVIMVIVLMGTAAIFFIDFRV----RSESKKYIVNPKDVPEAEAILVLGA-- 55
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ + R+ + LYK+ K ++ SG Q + E
Sbjct: 56 -YVKPNGKLCDMLE----DRVAVGIDLYKNNKAK----KLLFSGDHGQVN-YDEVNGMKK 105
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+ GV+++DI L+ T+++ + + K K II+V+ YHL R+ + G
Sbjct: 106 VAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKA---KKIIIVTQQYHLMRAVYIARQLG 162
Query: 197 INTKASCSDYLNAY 210
++ SD N +
Sbjct: 163 LDAYGVNSDQRNYW 176
>gi|162454961|ref|YP_001617328.1| hypothetical protein sce6679 [Sorangium cellulosum 'So ce 56']
gi|161165543|emb|CAN96848.1| hypothetical protein sce6679 [Sorangium cellulosum 'So ce 56']
Length = 208
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 70/205 (34%), Gaps = 15/205 (7%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
IG + R + S + +V LG +P S
Sbjct: 17 IGLMAFAVAAFTPVAAPLDRWMASAPDAGQADAVVALGADVDPDGRLPE-------DSLR 69
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R E + LY+ + +++ G + +E+ GV + E + L
Sbjct: 70 RAVEAVALYREGR-----APLVLMLGS-RNGPASEAESRARLAQRLGVPASALLTEPRGL 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T AQ S+ ++ + I+LV+ A+ + R++ F+ G A+ + S IP
Sbjct: 124 TTAVEAQRSAELLLPRGARRILLVTGAHRIARARRLFERAGFEVLAAPVP-EGSPASNIP 182
Query: 216 LSANFYLTELALKEYIGILIAYYRG 240
L+E ++ RG
Sbjct: 183 -GERLSAIGRLLQELAARALSRLRG 206
>gi|229827993|ref|ZP_04454062.1| hypothetical protein GCWU000342_00042 [Shuttleworthia satelles DSM
14600]
gi|229792587|gb|EEP28701.1| hypothetical protein GCWU000342_00042 [Shuttleworthia satelles DSM
14600]
Length = 203
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 58/143 (40%), Gaps = 12/143 (8%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
I +R + I SGG + ++E+ L G++ + +E S +
Sbjct: 58 IESRIRTAADWMKDHPDTICICSGGQGKDEDISEAEYMKEGLTAQGIDWKRLPMERNSTN 117
Query: 157 TFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T +N S +I ++ G + I+++SA+H R+ + G++ A + P
Sbjct: 118 TRENLALSHRVIASLGRGDSAIIITSAFHCYRAVFLGRREGLHCLALPA----------P 167
Query: 216 LSANFYLTELALKEYIGILIAYY 238
+L A +E + I + +
Sbjct: 168 NPRKSFLFFYA-REVVAIWVTWL 189
>gi|59713268|ref|YP_206043.1| transporter [Vibrio fischeri ES114]
gi|59481516|gb|AAW87155.1| transporter [Vibrio fischeri ES114]
Length = 364
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 15/179 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K N I+ LG ++ I R+ T+ + K + + I+++G
Sbjct: 186 KQGKGKNAIITLGYALNPDGSMNPI-------LIDRLNATLDMAK----KNPNSYIVVTG 234
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P+ H E + + L+++G++ I + + T +NA +SS + + ++S
Sbjct: 235 GVPKNHK-TEGKLMTDWLVKNGIDASRIIEDNYARSTVENALYSSYALARHNIDHATIIS 293
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
SA H++R Q F+ T + + PL T+ KE +GI R
Sbjct: 294 SASHVRRGQALFEVASWQTGPKGITFDTYSANDRPLEELKVPTD---KELLGIYRDALR 349
>gi|291003905|ref|ZP_06561878.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338]
Length = 189
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII---VLLGNGTTIIPTIPAIRIEPSFQ 92
+G + +L LQ++ R + +D ++LG G PS
Sbjct: 3 LGGFALAAFVLLPLQWALARSAGRIRTAEDVPATEFGLVLGAGVRYD-------GRPSRI 55
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
R+ + L+++ + +I+SG P G +E +V + L+ GV +D+ L+
Sbjct: 56 LQGRLNVALALHRAGRVR----RLIVSG-SPHSRGYSEPVVMRDYLVARGVPPEDVLLDE 110
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+DT +A+ ++ + + I +V++ +HL+RS F+ GI+T D
Sbjct: 111 SGVDTCSSARAAA---RTFGLRAITVVTTNFHLRRSVALFRRAGIDTYGVGHD 160
>gi|90577511|ref|ZP_01233322.1| hypothetical protein VAS14_10709 [Vibrio angustum S14]
gi|90440597|gb|EAS65777.1| hypothetical protein VAS14_10709 [Vibrio angustum S14]
Length = 365
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 66/175 (37%), Gaps = 15/175 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D I+ LG + P + + E + + + + I+++GG P
Sbjct: 191 DKGAIITLG-----------YALNPDGSMHPILVERLETTLAMAKANPDALIVLTGGVPM 239
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
H E + + L+E G+ +D I E + T NA FSS + K+ ++SSA H
Sbjct: 240 NHK-TEGKLMADWLIEKGISKDRIIEENYATSTVDNALFSSYALARHHIKHATIISSASH 298
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++R Q F+ T + Y PL E +GI R
Sbjct: 299 VRRGQTLFEIASWQTGPQSITFDTVSYPDKPLKE-LATPNDG--ELLGIYRDALR 350
>gi|153825737|ref|ZP_01978404.1| transporter [Vibrio cholerae MZO-2]
gi|149740576|gb|EDM54687.1| transporter [Vibrio cholerae MZO-2]
Length = 363
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 67/183 (36%), Gaps = 15/183 (8%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ Q IV LG + P + + + + + + I
Sbjct: 181 AEATQKLGKDGAIVTLG-----------YALNPDGSMHDILVKRLETTLDMAKANPEAMI 229
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+++GG PQ H E + + L+E GV I E + T NA +SS + K+
Sbjct: 230 VLTGGVPQNHK-TEGKLMADWLIERGVSAARIIEENYATSTVDNALYSSYALARHGIKHA 288
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++SSA H++R Q F+ T + Y PL+ + E +GI
Sbjct: 289 TIISSASHVRRGQTLFEIASWQTGPKGISFDTVSYPDKPLNELEKASSG---ELLGIYRD 345
Query: 237 YYR 239
R
Sbjct: 346 ALR 348
>gi|302379893|ref|ZP_07268373.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
gi|302312282|gb|EFK94283.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
Length = 308
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 24/199 (12%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ Y ++ ++ KIF + +++ + ++ + LL +L YQ+ KD + I
Sbjct: 89 ILYIAMIIVNLFKIFDLYKYIIGMNLYLSLMVLSHLLGNLIIKYQK------SDKDFDYI 142
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG IE S R+ + Y + K +I SGG +
Sbjct: 143 VVLGG--------SMKGIELSELIKQRMLTSFAYYTTNKS-----IMIFSGGKSNG-DIE 188
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM----QGKNIILVSSAYHL 185
ES+ N +E+ ++ DI LE +++T QN ++ +I+ + K I ++++ +H
Sbjct: 189 ESVAMKNFAIENHIQDTDILLEKLAMNTMQNIEYVKKLIQQQDTDFEDKKICVITNNFHA 248
Query: 186 KRSQLYFQHFGINTKASCS 204
R++L +N +
Sbjct: 249 FRTKLICNKMKVNWSVIPT 267
>gi|260900089|ref|ZP_05908484.1| transporter [Vibrio parahaemolyticus AQ4037]
gi|308110058|gb|EFO47598.1| transporter [Vibrio parahaemolyticus AQ4037]
Length = 365
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/175 (24%), Positives = 68/175 (38%), Gaps = 15/175 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ IV LG + P + + E + + + + II++GG P+
Sbjct: 191 NKGAIVTLG-----------YALNPDGSMHQILVERLETTLAMAKANPDAIIILTGGVPK 239
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
H E + + L+ GV +D I E + T NA FSS + K+ ++SSA H
Sbjct: 240 NHK-TEGKLMADWLIGKGVSKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASH 298
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++R Q F+ T + Y PL +E E +GI R
Sbjct: 299 VRRGQTLFEIASWQTGPQGITFDTVSYPDKPLKDLAKASES---ELLGIYRDALR 350
>gi|28901535|ref|NP_801190.1| hypothetical protein VPA1680 [Vibrio parahaemolyticus RIMD 2210633]
gi|260363086|ref|ZP_05775955.1| transporter [Vibrio parahaemolyticus K5030]
gi|260880373|ref|ZP_05892728.1| transporter [Vibrio parahaemolyticus AN-5034]
gi|260894740|ref|ZP_05903236.1| transporter [Vibrio parahaemolyticus Peru-466]
gi|28810082|dbj|BAC63023.1| putative exported protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308089437|gb|EFO39132.1| transporter [Vibrio parahaemolyticus Peru-466]
gi|308092057|gb|EFO41752.1| transporter [Vibrio parahaemolyticus AN-5034]
gi|308112354|gb|EFO49894.1| transporter [Vibrio parahaemolyticus K5030]
Length = 365
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/175 (24%), Positives = 68/175 (38%), Gaps = 15/175 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ IV LG + P + + E + + + + II++GG P+
Sbjct: 191 NKGAIVTLG-----------YALNPDGSMHQILVERLETTLAMAKANPDAIIILTGGVPK 239
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
H E + + L+ GV +D I E + T NA FSS + K+ ++SSA H
Sbjct: 240 NHK-TEGKLMADWLIGKGVSKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASH 298
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++R Q F+ T + Y PL +E E +GI R
Sbjct: 299 VRRGQTLFEIASWQTGPQGITFDTVSYPDKPLKDLAKASES---ELLGIYRDALR 350
>gi|229526278|ref|ZP_04415682.1| hypothetical protein VCA_000395 [Vibrio cholerae bv. albensis
VL426]
gi|297579775|ref|ZP_06941702.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|229336436|gb|EEO01454.1| hypothetical protein VCA_000395 [Vibrio cholerae bv. albensis
VL426]
gi|297535421|gb|EFH74255.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 363
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 67/183 (36%), Gaps = 15/183 (8%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ Q IV LG + P + + + + + + I
Sbjct: 181 AEATQKLGKDGAIVTLG-----------YALNPDGSMHDILVKRLETTLDMAKANPEAMI 229
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+++GG PQ H E + + L+E GV I E + T NA +SS + K+
Sbjct: 230 VLTGGVPQNHK-TEGKLMADWLIERGVSAARIIEENYATSTVDNALYSSYALARHGIKHA 288
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++SSA H++R Q F+ T + Y PL+ + E +GI
Sbjct: 289 TIISSASHVRRGQTLFEIASWQTGPKGISFDTVSYPDKPLNELEKASSG---ELLGIYRD 345
Query: 237 YYR 239
R
Sbjct: 346 ALR 348
>gi|153828978|ref|ZP_01981645.1| transporter [Vibrio cholerae 623-39]
gi|148875509|gb|EDL73644.1| transporter [Vibrio cholerae 623-39]
Length = 363
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 67/183 (36%), Gaps = 15/183 (8%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ Q IV LG + P + + + + + + I
Sbjct: 181 AEATQKLGKDGAIVTLG-----------YALNPDGSMHDILVKRLETTLDMAKANPEAMI 229
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+++GG PQ H E + + L+E GV I E + T NA +SS + K+
Sbjct: 230 VLTGGVPQNHK-TEGKLMADWLIERGVSAARIIEENYATSTVDNALYSSYALARHGIKHA 288
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++SSA H++R Q F+ T + Y PL+ + E +GI
Sbjct: 289 TIISSASHVRRGQTLFEIASWQTGPKGISFDTVSYPDKPLNELEKASSG---ELLGIYRD 345
Query: 237 YYR 239
R
Sbjct: 346 ALR 348
>gi|229527925|ref|ZP_04417316.1| hypothetical protein VCG_000999 [Vibrio cholerae 12129(1)]
gi|229334287|gb|EEN99772.1| hypothetical protein VCG_000999 [Vibrio cholerae 12129(1)]
Length = 363
Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 67/183 (36%), Gaps = 15/183 (8%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ Q IV LG + P + + + + + + I
Sbjct: 181 AEATQKLGKDGAIVTLG-----------YALNPDGSMHDILVKRLETTLDMAKANPEAMI 229
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+++GG PQ H E + + L+E GV I E + T NA +SS + K+
Sbjct: 230 VLTGGVPQNHK-TEGKLMADWLIERGVSAARIIEENYATSTVDNALYSSYALARHGIKHA 288
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++SSA H++R Q F+ T + Y PL+ + E +GI
Sbjct: 289 TIISSASHVRRGQTLFEIASWQTGPKGISFDTVSYPDKPLNELEKASSG---ELLGIYRD 345
Query: 237 YYR 239
R
Sbjct: 346 ALR 348
>gi|325576625|ref|ZP_08147343.1| transporter [Haemophilus parainfluenzae ATCC 33392]
gi|325161188|gb|EGC73303.1| transporter [Haemophilus parainfluenzae ATCC 33392]
Length = 387
Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 12/130 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ I+ LG ++ I ++ R+ +T+ + + II++GG P
Sbjct: 213 PAQSAIIALGYALNPDGSMHDILVQ-------RLEKTLEIANQ----NPDALIIVTGGVP 261
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
Q + E + L+E GV+ I + + T +NA FS + + K+ +L+SS
Sbjct: 262 QNNK-TEGDLMKQWLIEKGVDASRIYSDNYARSTVENALFSRYSLAKHKIKHAVLISSGS 320
Query: 184 HLKRSQLYFQ 193
H++R Q F+
Sbjct: 321 HVRRGQALFE 330
>gi|72161268|ref|YP_288925.1| hypothetical protein Tfu_0864 [Thermobifida fusca YX]
gi|71915000|gb|AAZ54902.1| conserved hypothetical protein [Thermobifida fusca YX]
Length = 315
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 76/205 (37%), Gaps = 18/205 (8%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ ++ ILL +++ + + IV+LG PS +
Sbjct: 119 VALLVLTVILLPCATWAWVWYTARQDERPPSDAIVVLGA--------SQYNGRPSPVFEA 170
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ LY + + T++ GG+ E L+E GV D + +
Sbjct: 171 RLRHAAHLY----EEGVAPTVVTVGGNQPGDNFTEGGSGARWLVEQGVPADSVIPIGKGS 226
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
DT ++ + + + + + ++VS +H RS+ + FGI S + + +
Sbjct: 227 DTLESLELVAQVFEERGWRTAVIVSDPWHSLRSREIAEDFGIEAATSPA--RSGPAVLER 284
Query: 216 LSANFYLTELALKEYIGILIAYYRG 240
+ +Y+T +E + + G
Sbjct: 285 ETQLWYIT----RETASLWHYWIFG 305
>gi|254451471|ref|ZP_05064908.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198265877|gb|EDY90147.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 201
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
L L +++ P + + + IV +G + T+ A + +R+ ++L++
Sbjct: 3 LSMLAWTFLWPEPDVRALQSADAIVCMGGSMSADGTLAA-------STLTRVERCVQLFE 55
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
+ + II SGG + G + + GV +D + E + T QNA FS
Sbjct: 56 A----GLAPVIIFSGGIARPTGPSAGAQMGRFAMTLGVPQDGVIAEGLAQSTLQNALFSL 111
Query: 166 SMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+I N + II+V+ A+HL RS F+
Sbjct: 112 PLIPNA--ERIIIVTEAFHLPRSWASFR 137
>gi|163801450|ref|ZP_02195349.1| hypothetical protein 1103602000598_AND4_11294 [Vibrio sp. AND4]
gi|159174939|gb|EDP59739.1| hypothetical protein AND4_11294 [Vibrio sp. AND4]
Length = 365
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 69/175 (39%), Gaps = 15/175 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ I+ LG + P + + E + + Q + I+++GG P+
Sbjct: 191 NKGAIITLG-----------YALNPDGSMHPILIERLETTLAMAQANPDALIVLTGGVPK 239
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
H E + + L+E G+ +D I E + T NA FSS + K+ ++SSA H
Sbjct: 240 NHK-TEGKLMADWLIEKGISKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASH 298
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++R Q F+ T + Y PL ++ E +GI R
Sbjct: 299 VRRGQTLFEVASWQTGPQGITFDTVSYPDKPLKDLAKASDG---ELLGIYRDALR 350
>gi|297623587|ref|YP_003705021.1| hypothetical protein Trad_1356 [Truepera radiovictrix DSM 17093]
gi|297164767|gb|ADI14478.1| protein of unknown function DUF218 [Truepera radiovictrix DSM
17093]
Length = 176
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 63/183 (34%), Gaps = 28/183 (15%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P + ++++G PS R+ LY++ I+++
Sbjct: 22 PTPGCPADTLLVMGAAQYD--------GVPSPAFARRLDRAFELYEAGCAE----KILVT 69
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG E L GV + ET+S + QN ++S +++ G+ +++V
Sbjct: 70 GGKRPGDRFTEGEAGVRYLAARGVPETALLKETKSRSSLQNLRYSLPLVR---GERVLIV 126
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ H R+ Q G++ + + L+E + AY
Sbjct: 127 TDDLHTYRTGFLAQELGLDATVTGVPTKGPRLPYL------------LRE-AASVTAYLL 173
Query: 240 GNR 242
G R
Sbjct: 174 GRR 176
>gi|239833683|ref|ZP_04682011.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239821746|gb|EEQ93315.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 206
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 76/190 (40%), Gaps = 40/190 (21%)
Query: 53 YQRPLLS-PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
+ +P+L+ ++IV+ P R + RL+K +
Sbjct: 20 FSQPVLTLQDDGGRADVIVV-----------------PGGDGPPRAAQAARLWKEGRS-- 60
Query: 112 MHCTIIISG-GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
I+++G GD + ++ +GV I +E QS T+QNAQFS+ +++
Sbjct: 61 --PVILVTGDGDCLYN--------KRIMVRNGVNPSAIFVECQSGSTWQNAQFSAPVLRE 110
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHF----GINTKASCSDYLNAYYSIIPLSANFYLTELA 226
++ ++ ++V++ YH +R+ F+ + D + P EL
Sbjct: 111 IRARSALVVTNWYHSRRAIASFRAACPQMRFISSPIGGDDGRPGFPATP-----ADMELV 165
Query: 227 LKEYIGILIA 236
KEY+ +
Sbjct: 166 AKEYVKLGWY 175
>gi|84683831|ref|ZP_01011734.1| hypothetical protein 1099457000264_RB2654_20698 [Maritimibacter
alkaliphilus HTCC2654]
gi|84668574|gb|EAQ15041.1| hypothetical protein RB2654_20698 [Rhodobacterales bacterium
HTCC2654]
Length = 154
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 60/156 (38%), Gaps = 11/156 (7%)
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ P + + II++GG AE+ V L + V
Sbjct: 2 GAAVWPGGVASPALRRRTERAGRLLLDGQVQQIIVTGGVG-DIPPAEADVAAGILADMEV 60
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
D + +T+S TF+N + M++ G+ +++VS A+HL RS L + G+
Sbjct: 61 PADLVLRDTRSTTTFENLVEARRMLQA--GETVVVVSDAFHLPRSVLTARRLGLAASGES 118
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + + + AL+E ++ R
Sbjct: 119 TS--------LSGANPWRIIRAALREVPALIWYGIR 146
>gi|228474759|ref|ZP_04059490.1| conserved hypothetical protein [Staphylococcus hominis SK119]
gi|228271422|gb|EEK12790.1| conserved hypothetical protein [Staphylococcus hominis SK119]
Length = 185
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 12/142 (8%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
S + + + ++LG + T+ ++ R+ + K+ + II+
Sbjct: 21 STDFNNNHHAYIVLGTSLSKDGTLKR-------ETIKRLATCL----KAKKQNEKAYIIV 69
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SGG P +G ++ L++ V+ DI E S DT +NA + + ++ L
Sbjct: 70 SGGRPV-NGNTQANEMKKWLIQHCVKEKDIITEQNSSDTIENAIETLKIADKRGFNSLSL 128
Query: 179 VSSAYHLKRSQLYFQHFGINTK 200
++S H++R+ L F+ N K
Sbjct: 129 ITSGDHVRRATLIFEKLDKNIK 150
>gi|89072860|ref|ZP_01159417.1| hypothetical protein SKA34_05135 [Photobacterium sp. SKA34]
gi|89051382|gb|EAR56837.1| hypothetical protein SKA34_05135 [Photobacterium sp. SKA34]
Length = 365
Score = 86.1 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 12/152 (7%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D I+ LG + P + + E + + + + I+++GG P
Sbjct: 191 DKGAIITLG-----------YALNPDGSMHPILVERLETTLAMAKANPDALIVLTGGVPM 239
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
H E + + L+E G+ ++ I E + T NA FSS + K+ ++SSA H
Sbjct: 240 NHK-TEGKLMADWLIEKGINKNRIIEENYATSTVDNALFSSYALARHHIKHATIISSASH 298
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
++R Q F+ T + Y PL
Sbjct: 299 VRRGQTLFEIASWQTGPQNITFDTVSYPDKPL 330
>gi|312881337|ref|ZP_07741134.1| hypothetical protein VIBC2010_16004 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370977|gb|EFP98432.1| hypothetical protein VIBC2010_16004 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 365
Score = 86.1 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 69/176 (39%), Gaps = 15/176 (8%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+D IV LG + P + + E + + + II++GG P
Sbjct: 190 EDRGAIVTLG-----------YALNPDGSMHEILIERLMTTLKLAKENPDALIILTGGVP 238
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ + E + + L+ G+ + I E + T NA FSS + + K+ ++SSA
Sbjct: 239 KNNK-TEGKLMADWLVGKGINPNRIIEENYATSTVGNALFSSYALARHKIKHATIISSAS 297
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
H++R Q F+ T + Y PL +++ E +GI R
Sbjct: 298 HVRRGQTLFEIASWQTGPQNITFDTVSYPDKPLEQLKQVSDS---ELLGIYRDALR 350
>gi|126642093|ref|YP_001085077.1| hypothetical protein A1S_2048 [Acinetobacter baumannii ATCC 17978]
gi|126387977|gb|ABO12475.1| hypothetical protein A1S_2048 [Acinetobacter baumannii ATCC 17978]
Length = 114
Score = 86.1 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVSSAYHLKRSQLYF 192
L GV+ LE +S++T +N +FSS +++ G ++LV+ YH+ R++ F
Sbjct: 1 MQAWLKARGVDAK--LLEKRSMNTCENTRFSSLLLQKKGGAPTVMLVTDEYHMPRTRRLF 58
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
GI T + P N+ + A E + + G+
Sbjct: 59 ALNGIETIPVTAPMPTPLTRWQPSIQNYDHSRRANYELLATIRDMLFGS 107
>gi|84385174|ref|ZP_00988206.1| hypothetical protein V12B01_15926 [Vibrio splendidus 12B01]
gi|84379771|gb|EAP96622.1| hypothetical protein V12B01_15926 [Vibrio splendidus 12B01]
Length = 365
Score = 86.1 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 17/179 (9%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+ + +L L+ S + LLS D IV LG + P + +
Sbjct: 169 FATVDRVLETPLKESADKGLLS-----DHGAIVTLG-----------YALNPDGSMHEIL 212
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E + + + + I+++GG P+ H E + + L+ GV +D I E + T
Sbjct: 213 IERLETTLAMSKANPDAMIVLTGGVPKNHK-TEGKLMADWLISKGVSKDRIIEENYATST 271
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
NA FSS + K+ ++SSA H++R Q F+ T + Y PL
Sbjct: 272 VGNALFSSYALARHDIKHATIISSASHVRRGQTLFEIASWQTGPQGITFDTVSYPDKPL 330
>gi|317489670|ref|ZP_07948174.1| DUF218 domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|316911264|gb|EFV32869.1| DUF218 domain-containing protein [Eggerthella sp. 1_3_56FAA]
Length = 218
Score = 86.1 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 19/183 (10%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+ C +++ + + TI + P D + IV+LG T
Sbjct: 7 LMLGCMLVVVAVFAATNVATIATT--KDRIVEP--QSAVGFDADAIVVLGASVFADGT-- 60
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS R+ + + LYK + +I+SG D E V + + GV
Sbjct: 61 -----PSGILRDRLDDGIALYKE----GVAPKLIMSG-DNSTVSYNEVQVMKDYAISQGV 110
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
DI + T+++ + + + I++ + YHL R+ Q G+ +
Sbjct: 111 PSHDIFCDHAGFSTYESMYRAKHV---FGAERIVVATQTYHLYRALYAAQGLGLESLGVA 167
Query: 204 SDY 206
SDY
Sbjct: 168 SDY 170
>gi|86145789|ref|ZP_01064118.1| hypothetical protein MED222_04000 [Vibrio sp. MED222]
gi|85836488|gb|EAQ54617.1| hypothetical protein MED222_04000 [Vibrio sp. MED222]
Length = 365
Score = 86.1 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 17/179 (9%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+ + +L L+ S + LLS D IV LG + P + +
Sbjct: 169 FATVDRVLETPLKESADKGLLS-----DHGAIVTLG-----------YALNPDGSMHEIL 212
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E + + + + I+++GG P+ H E + + L+ GV +D I E + T
Sbjct: 213 IERLETTLAMSKANPDAMIVLTGGVPKNHK-TEGKLMADWLISKGVSKDRIIEENYATST 271
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
NA FSS + K+ ++SSA H++R Q F+ T + Y PL
Sbjct: 272 VGNALFSSYALARHDIKHATIISSASHVRRGQTLFEIASWQTGPQGITFDTVSYPDKPL 330
>gi|254254401|ref|ZP_04947718.1| hypothetical protein BDAG_03699 [Burkholderia dolosa AUO158]
gi|124899046|gb|EAY70889.1| hypothetical protein BDAG_03699 [Burkholderia dolosa AUO158]
Length = 204
Score = 85.7 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 69/176 (39%), Gaps = 20/176 (11%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ ++ V+ G+ P +R+ + Y+S + C +I+ G
Sbjct: 26 EPADVAVIFGSALDDD-------GAPKPVLTARLDVGVHCYRSGR-----CPVILVSGGI 73
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
GL E+ + L+ GV D I ++ Q +T AQ + + ++ + +++VS Y
Sbjct: 74 DGPGLNEATAMRDYLVARGVPADRIAVDDQGDNTLATAQHTLAYMRAHRMSRVLIVSQYY 133
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
HL R++L F+ GI + Y P + + +E + R
Sbjct: 134 HLARARLAFERVGIEP--------SNIYVAYPRAFQLRDVYSSWREVPAYAVYAVR 181
>gi|317132721|ref|YP_004092035.1| protein of unknown function DUF218 [Ethanoligenens harbinense
YUAN-3]
gi|315470700|gb|ADU27304.1| protein of unknown function DUF218 [Ethanoligenens harbinense
YUAN-3]
Length = 258
Score = 85.7 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 68/192 (35%), Gaps = 22/192 (11%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L + + F S +L + + W + + + P G +V+LG
Sbjct: 61 KLKISRVFRRFLWSVSLLCMAIVCWMAVSFTAIILVGRGSTPPA--------GATVVVLG 112
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G+ + P F I + I SGG A++
Sbjct: 113 EGSY--------KGVPDFNQLIGITAAGNYLR----THPSAMCIASGGVTTDISPADATA 160
Query: 134 YNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS-AYHLKRSQLY 191
+ L+ + + D I +E QS T +N +S +I+ I V++ A+HL R+++
Sbjct: 161 IRDVLISQYQISSDRIFVENQSRTTHENMLYSKKIIQAHGLSRNIAVAAPAFHLLRAEMI 220
Query: 192 FQHFGINTKASC 203
+ G+
Sbjct: 221 ARRMGLVPYGLP 232
>gi|281209541|gb|EFA83709.1| hypothetical protein PPL_02776 [Polysphondylium pallidum PN500]
Length = 548
Score = 85.7 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 53/147 (36%), Gaps = 19/147 (12%)
Query: 59 SPQWKKDGN---IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
SP K+ N IV LG PS R+ + Y +
Sbjct: 121 SPSTKRSDNHDVAIVTLGYTLHSD-------GMPSKILKDRVSTAVDAYVQLVNTGSNPL 173
Query: 116 IIISGGDPQKHGL-------AESIVYNNKLLESG--VERDDIKLETQSLDTFQNAQFSSS 166
+I SG + +E+ + L V I L+ S +T +NA +
Sbjct: 174 LIFSGKGKTGNNELDEYEYKSEAAAMKDLALALDDKVLESSIYLDLTSTNTAENALNTLG 233
Query: 167 MIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+++ + +V+S +H+ R+Q FQ
Sbjct: 234 RLESDGISRVYVVTSDFHMLRAQYTFQ 260
>gi|153838447|ref|ZP_01991114.1| transporter [Vibrio parahaemolyticus AQ3810]
gi|149748167|gb|EDM59026.1| transporter [Vibrio parahaemolyticus AQ3810]
Length = 365
Score = 85.7 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/175 (24%), Positives = 68/175 (38%), Gaps = 15/175 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ IV LG + P + + E + + + + II++GG P+
Sbjct: 191 NKGAIVTLG-----------YALNPDGSMHQILVERLETTLAMAKANPDAIIILTGGVPK 239
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
H E + + L+ GV +D I E + T NA FSS + K+ ++SSA H
Sbjct: 240 NHK-TEGKLMADWLIGKGVSKDRIIEENYATSTVGNALFSSYALARHYIKHATIISSASH 298
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++R Q F+ T + Y PL +E E +GI R
Sbjct: 299 VRRGQTLFEIASWQTGPQGITFDTVSYPDKPLKDLAKASES---ELLGIYRDALR 350
>gi|254520411|ref|ZP_05132467.1| exported protein [Clostridium sp. 7_2_43FAA]
gi|226914160|gb|EEH99361.1| exported protein [Clostridium sp. 7_2_43FAA]
Length = 217
Score = 85.7 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 57/144 (39%), Gaps = 15/144 (10%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + I++LG G T PS R+ ++ +++ + T ++SG D
Sbjct: 38 ENDAIIVLGAGVRADGT-------PSDILADRLETSLEAFEA----GLGNTFLLSG-DHG 85
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E +L++ ++ I ++ T+ + + K I+V++ YH
Sbjct: 86 REEYNEVGSMKKYILQNDIDEKIIFMDHAGFSTYDTMYRAKEIFK---VDKAIIVTNEYH 142
Query: 185 LKRSQLYFQHFGINTKASCSDYLN 208
L R+ + GI+ SD
Sbjct: 143 LPRALYIARKLGIDAYGINSDKRQ 166
>gi|260578222|ref|ZP_05846141.1| secreted protein [Corynebacterium jeikeium ATCC 43734]
gi|258603678|gb|EEW16936.1| secreted protein [Corynebacterium jeikeium ATCC 43734]
Length = 213
Score = 85.7 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 19/177 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ + I +LG PS SR+ LYK + TI+ G
Sbjct: 48 DDRRPADTIFVLGA--------AQYAGSPSNWFASRLNHAAELYKQ----GVAPTIVTVG 95
Query: 121 GDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G + E+ L+E+ + + + DT ++A+ + + + ++V
Sbjct: 96 GKAEGDQYTEAAAGKKYLVENFDIPDSAVVPVEEGADTLKSAEAFAQVASENGWRTSVVV 155
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ H R+ + G++ AS + + ++ + L E +G+L
Sbjct: 156 TDPEHSLRATRMVRDQGLDAWASPTRQGPSVFTRKSQA------NSILHETLGMLYY 206
>gi|150389466|ref|YP_001319515.1| hypothetical protein Amet_1679 [Alkaliphilus metalliredigens QYMF]
gi|149949328|gb|ABR47856.1| protein of unknown function DUF218 [Alkaliphilus metalliredigens
QYMF]
Length = 196
Score = 85.7 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ V+LGN + T PS + R+ + + LY+ + +I+SGG K
Sbjct: 43 ADAAVVLGNKVELDGT-------PSPRLQGRLDKAVELYEKGYFNY----VIVSGGTG-K 90
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
G E++V + L+++ + D + L+ + ++ A+ + ++ +M +++ ++S YH+
Sbjct: 91 EGFDEALVMKDYLVKNEIPDDKVILDQEGYNSMMTAKNTKIIMDHMDLESVTVISQFYHI 150
Query: 186 KRSQLYFQHFGIN 198
R++L F+ G
Sbjct: 151 TRTKLAFRKVGFE 163
>gi|237786091|ref|YP_002906796.1| hypothetical protein ckrop_1524 [Corynebacterium kroppenstedtii DSM
44385]
gi|237759003|gb|ACR18253.1| putative membrane protein [Corynebacterium kroppenstedtii DSM
44385]
Length = 333
Score = 85.7 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/269 (14%), Positives = 90/269 (33%), Gaps = 52/269 (19%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIP----TILLKHLQFSYQRP 56
+ WI L S + + + + L F+ + + H Y
Sbjct: 83 IPAVWIALTPSGVQPFVRVVAGGYSLVFVALGGGFVCFVRAVRRHRSTPWSHRSRQYDSQ 142
Query: 57 LLSPQWKKDG--NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH- 113
SP G I++ G G I+ S R+ + + +++ +
Sbjct: 143 HDSPGQHHAGVPEGIIVCGAGL--------IQGRVSRVLAYRVDKGIEVWRDTEHTHPSE 194
Query: 114 ----------CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
+++ GG E+ E G++ I +E S T +N +
Sbjct: 195 SGPDERLEHEPVLVLCGGRGNDEPRPEAEAMAEYAREQGMQPQHIVVEDTSTTTEENLRH 254
Query: 164 SSSMIKN---MQGKNIILVSSAYH----------LKRSQLYFQHFGINTKASCSDYLNAY 210
+ +++ + +++++VS+ +H L+R+ L F+ + + +
Sbjct: 255 AHAIMTERLGREPQSLVVVSTDFHCIRIDMIVERLRRAGL-FRKCDVEVVGARNPRSVQN 313
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYR 239
+S+ L+EY + + Y +
Sbjct: 314 HSL-------------LREYAAVGMHYAK 329
>gi|227827121|ref|YP_002828900.1| hypothetical protein M1425_0793 [Sulfolobus islandicus M.14.25]
gi|229584289|ref|YP_002842790.1| hypothetical protein M1627_0798 [Sulfolobus islandicus M.16.27]
gi|227458916|gb|ACP37602.1| protein of unknown function DUF218 [Sulfolobus islandicus M.14.25]
gi|228019338|gb|ACP54745.1| protein of unknown function DUF218 [Sulfolobus islandicus M.16.27]
Length = 180
Score = 85.3 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 25/129 (19%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G S RI E +RLYK + II+ G K
Sbjct: 3 DAIVVLGGG---------------KLSEGRIDEAIRLYKQGIAKYL---IIVGG----KE 40
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
++E K+ +++ ++ SL T NA ++ +I+ + K+I++V+S +H+K
Sbjct: 41 EVSE---MYKKVRSKIQNIENVYVDNNSLSTADNAYYAKKIIEKLNIKSILIVTSNFHIK 97
Query: 187 RSQLYFQHF 195
R+ F+ F
Sbjct: 98 RALKTFELF 106
>gi|156975997|ref|YP_001446903.1| hypothetical protein VIBHAR_04767 [Vibrio harveyi ATCC BAA-1116]
gi|156527591|gb|ABU72676.1| hypothetical protein VIBHAR_04767 [Vibrio harveyi ATCC BAA-1116]
Length = 365
Score = 85.3 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 15/175 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D IV LG + P + + E + + + + I+++GG P+
Sbjct: 191 DKGAIVTLG-----------YALNPDGSMHQILVERLETTLAMAKANPDALIVLTGGVPK 239
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
H E + + L+E G+ +D I E + T NA FSS + K+ ++SSA H
Sbjct: 240 NHK-TEGKLMADWLIEKGISKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASH 298
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++R Q F+ T + Y PL ++ E +GI R
Sbjct: 299 VRRGQTLFEIASWQTGPQDITFDTVSYPDKPLKDLAKASDG---ELLGIYRDALR 350
>gi|325524364|gb|EGD02455.1| hypothetical protein B1M_21433 [Burkholderia sp. TJI49]
Length = 138
Score = 85.3 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSYQRPLLS 59
M+L F+++ +L + R++ ++ L GW P I + P+
Sbjct: 1 MILFDSFVLLFIGFMLFRKWRRLIALAAVALFGLLATGWLAAPLIAWAEAGVA---PVAR 57
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P +IV+ G GT T + P +RI +T LY++C+Q + CT+++S
Sbjct: 58 PDMHGQTTLIVI-GAGTRRTDT----GLRPPPDGDARIRKTAALYRACRQQAQRCTVVMS 112
Query: 120 GGDPQKHGLAESIVYNNKLLE 140
GGDPQ HG E+ VY +L+
Sbjct: 113 GGDPQHHGETEAAVYGRQLVA 133
>gi|329944928|ref|ZP_08292955.1| hypothetical protein HMPREF9056_00838 [Actinomyces sp. oral taxon
170 str. F0386]
gi|328529739|gb|EGF56635.1| hypothetical protein HMPREF9056_00838 [Actinomyces sp. oral taxon
170 str. F0386]
Length = 355
Score = 85.3 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 59/149 (39%), Gaps = 14/149 (9%)
Query: 94 YSRIFETMRLYKSCKQHSMHCTIII-SGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
SRI ++ + +++ SGG ++E+ + + G+ I LE
Sbjct: 189 GSRITGGIKAWHDEDALRPGVPLLVMSGGQGPDEPVSEARAMADYAIARGIPSGQILLED 248
Query: 153 QSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
+S T N + ++ ++LV+S++H R+ + G+ + S
Sbjct: 249 RSTTTRTNITCTRDLLAEHGMVDPQVLLVTSSFHAVRTAILASDMGVPWAVAPS------ 302
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYR 239
+A FY+ L+EYI +L R
Sbjct: 303 -----RTAWFYIVNAWLREYIAVLTYRRR 326
>gi|289207668|ref|YP_003459734.1| hypothetical protein TK90_0483 [Thioalkalivibrio sp. K90mix]
gi|288943299|gb|ADC70998.1| protein of unknown function DUF218 [Thioalkalivibrio sp. K90mix]
Length = 224
Score = 85.3 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 58/188 (30%), Gaps = 15/188 (7%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+R++ S + + + L + S +++LG
Sbjct: 8 LRRVGPDGLLTFGLSNLVIVLTAGLSWLALWGRMHLWVRSLDCPGRAPWVIVLGQQLQEG 67
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R+ + +++ GG G +ES L
Sbjct: 68 CPGPGYRLRLLRTLR------------LLRRDPEARVLLLGGYTSPEGPSESAAGAAFLR 115
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSSAYHLKRSQLYFQHFG 196
+ G+ I E S T +N Q + ++ G +LV+S +HL R+ + G
Sbjct: 116 QRGIPASRIFCEEDSRHTLENLQNARDLLVQRTGGRLPRCVLVTSRFHLPRAVAIARGVG 175
Query: 197 INTKASCS 204
+ +
Sbjct: 176 LEVCPCPA 183
>gi|91223050|ref|ZP_01258316.1| hypothetical protein V12G01_04386 [Vibrio alginolyticus 12G01]
gi|91191863|gb|EAS78126.1| hypothetical protein V12G01_04386 [Vibrio alginolyticus 12G01]
Length = 365
Score = 85.3 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 15/175 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D IV LG + P + + E + + + + I+++GG P+
Sbjct: 191 DKGAIVTLG-----------YALNPDGSMHQILVERLETTLAMAKANPDALIVLTGGVPK 239
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
H E + + L+E G+ +D I E + T NA FSS + K+ ++SSA H
Sbjct: 240 NHK-TEGKLMADWLIEKGISKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASH 298
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++R Q F+ T + Y PL ++ E +GI R
Sbjct: 299 VRRGQTLFEIASWQTGPQDITFDTVSYPDKPLKDLAKASDG---ELLGIYRDALR 350
>gi|299137094|ref|ZP_07030277.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
gi|298601609|gb|EFI57764.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
Length = 222
Score = 85.3 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 15/155 (9%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
+ + + + I + G PS ++R+ + + LY+
Sbjct: 37 YREIKFTADIDNAQTADAIAVFGAAEYA--------GRPSPVLHARLDKAVALYQRG--- 85
Query: 111 SMHCTIIIS--GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
++++ GG + G E V + LL +GV D I ET+S DT Q + + +
Sbjct: 86 --IAPVVVTLGGGGDKDSGNTEGGVGRDYLLANGVPYDKIIAETESFDTEQQVENLALIA 143
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ ++I++VS HL R L + G+ S
Sbjct: 144 EREHFRHIVVVSDGTHLFRIALLCRRAGLQVYTSP 178
>gi|261251880|ref|ZP_05944454.1| hypothetical protein VIA_001901 [Vibrio orientalis CIP 102891]
gi|260938753|gb|EEX94741.1| hypothetical protein VIA_001901 [Vibrio orientalis CIP 102891]
Length = 365
Score = 85.3 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 15/175 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D IV LG + P + + E + + + I+++GG P+
Sbjct: 191 DKGAIVTLG-----------YALNPDGSMHQILVERLETTLQMAKDNPDALIVLTGGVPK 239
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
H E + + L+E G++++ I E + T NA FSS + ++ ++SSA H
Sbjct: 240 NHK-TEGKLMADWLIEKGIKKERIIEENYATSTVGNALFSSYALARHNIQHATIISSASH 298
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++R Q F+ T + Y PL LT+ + E +GI R
Sbjct: 299 VRRGQTLFEIASWQTGPQDITFDTVSYPDKPLKE---LTKASASELLGIYRDALR 350
>gi|62391115|ref|YP_226517.1| hypothetical protein cg2495 [Corynebacterium glutamicum ATCC 13032]
gi|41326454|emb|CAF20616.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC
13032]
Length = 200
Score = 85.3 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 68/189 (35%), Gaps = 25/189 (13%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
L +P + + I++LG PS Q +R+ +L++ + +
Sbjct: 2 LRTPNNRHKIDSILVLG--------TAQYDGVPSRQFAARLRHAAKLWRLHEIQH----V 49
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
GG E+ V L++ GV+ D I + DT S + + +
Sbjct: 50 YTVGGKLPGDRFTEAEVAREYLIKEGVDPDLIFVSAVGNDTVS----SYEALDPEKLGRV 105
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++V+ H R+ + G + K S + Y A + P F E+ G+++
Sbjct: 106 LIVTDPNHSYRAVRIARRMGFDAKPSPTTYSPAKF---PSIVYFLTLS---HEWGGVVVQ 159
Query: 237 ---YYRGNR 242
G R
Sbjct: 160 DVSRLLGER 168
>gi|269120634|ref|YP_003308811.1| hypothetical protein Sterm_2025 [Sebaldella termitidis ATCC 33386]
gi|268614512|gb|ACZ08880.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 216
Score = 85.3 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 18/184 (9%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K + +LL FIG + I +++ Y + K ++LG+ T
Sbjct: 2 KKVVIIFKILLVLFIG-AVFINIYIQYSTKKYIFSDVEEAPKTYTG--LVLGSMVFDNGT 58
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
PS R+ +T LYK+ K I++SG QK+ E N LL+
Sbjct: 59 -------PSGVVRQRLDKTAELYKAGKIK----RILVSGDHGQKN-YDEVNSMKNYLLKK 106
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ +DI L+ DT+ + + + + ++I+++ +HL RS + G+N
Sbjct: 107 GIPIEDIFLDHAGFDTYSSMVRAKEIFE---IDDVIVITQKFHLPRSVYIARKKGMNAYG 163
Query: 202 SCSD 205
S+
Sbjct: 164 VVSN 167
>gi|187777765|ref|ZP_02994238.1| hypothetical protein CLOSPO_01357 [Clostridium sporogenes ATCC
15579]
gi|187774693|gb|EDU38495.1| hypothetical protein CLOSPO_01357 [Clostridium sporogenes ATCC
15579]
Length = 242
Score = 84.9 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
+ +++P+ + I++LG + + R+ + LYK+ K
Sbjct: 56 KYIVNPKDVPEAEAILVLGA---YVKPNGKLCDMLE----DRVAVGIDLYKNNKAK---- 104
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
++ SG Q + E + GV+++DI L+ T+++ + + K K
Sbjct: 105 KLLFSGDHGQVN-YDEVNGMKKVAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKA---K 160
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
II+V+ YHL R+ + G++ SD N +
Sbjct: 161 KIIIVTQQYHLMRAVYIARQLGLDAYGVNSDQRNYW 196
>gi|306840763|ref|ZP_07473510.1| Bme2 protein [Brucella sp. BO2]
gi|306289158|gb|EFM60407.1| Bme2 protein [Brucella sp. BO2]
Length = 189
Score = 84.9 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 76/190 (40%), Gaps = 40/190 (21%)
Query: 53 YQRPLLS-PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
+ +PLL+ + ++I++ P R + +L+K +
Sbjct: 3 FSQPLLTLQDDGRPADVIIV-----------------PGGDGAPRAAQAAQLWKDGRS-- 43
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
I++ GD ++ + ++ GV I +E +S T+QNA+FS+ +++ +
Sbjct: 44 ---PYILATGDGD------CLLNKHIMMAKGVPPSAILVECRSGSTWQNARFSAPLLRRL 94
Query: 172 QGKNIILVSSAYHLKRSQLYFQ----HFGINTKASC-SDYLNAYYSIIPLSANFYLTELA 226
K+ ++V++ +H +R+ F+ + +D + P + E
Sbjct: 95 HAKSALIVTNWFHSRRAVASFRTACPQMHFASSPVADADMPGGFPGTPP------VIEHV 148
Query: 227 LKEYIGILIA 236
+KEY +
Sbjct: 149 VKEYAKLGWY 158
>gi|257790208|ref|YP_003180814.1| hypothetical protein Elen_0438 [Eggerthella lenta DSM 2243]
gi|257474105|gb|ACV54425.1| protein of unknown function DUF218 [Eggerthella lenta DSM 2243]
Length = 215
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 69/183 (37%), Gaps = 19/183 (10%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+ C +++ + + TI + P + D + IV+LG T
Sbjct: 4 LMLGCMLVVVAVFAATNVATIATT--KDRIVEPQAA--VGFDADAIVVLGASVFADGT-- 57
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS R+ + + LYK + +I+SG D E V + + GV
Sbjct: 58 -----PSGILRDRLDDGIALYKE----GVAPKLIMSG-DNSTVSYNEVQVMKDYAISQGV 107
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
DI + T+++ + + + I++ + YHL R+ Q G+++
Sbjct: 108 PSYDIFCDHAGFSTYESMYRAKHV---FGAERIVVATQTYHLYRALYAAQGLGLDSLGVA 164
Query: 204 SDY 206
SDY
Sbjct: 165 SDY 167
>gi|303235087|ref|ZP_07321710.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
gi|302493791|gb|EFL53574.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
Length = 308
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 27/206 (13%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
LS L ++ + I + M L+ + ++ + LL +L YQ+ +
Sbjct: 85 LSASLLYIAMIAINLFKIFDPYKYIIGMNLYLSL---MVLSHLLGNLIIKYQK------F 135
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
D + IV+LG IE S R+ + Y + K +I SGG
Sbjct: 136 DTDFDYIVVLGG--------SMKGIELSELIKQRMLTSFAYYTTNKS-----IMIFSGGK 182
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ----GKNIIL 178
+ ES+ N +E+ ++ DI LE +++T QN ++ +I+ K I +
Sbjct: 183 SNG-DIEESVAMKNFAIENHIQDTDILLEKLAMNTMQNIEYVKKLIQQQDTDFVDKKICV 241
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCS 204
+++ +H R++L +N +
Sbjct: 242 ITNNFHAFRTKLICNKMKVNWTVIPT 267
>gi|256059361|ref|ZP_05449563.1| hypothetical protein Bneo5_03263 [Brucella neotomae 5K33]
gi|261323321|ref|ZP_05962518.1| Bme2 [Brucella neotomae 5K33]
gi|261299301|gb|EEY02798.1| Bme2 [Brucella neotomae 5K33]
Length = 205
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 79/205 (38%), Gaps = 40/205 (19%)
Query: 43 TILLKHLQFSYQRPLLS-PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
IL+ + +PLL+ + ++I++ P R +
Sbjct: 9 AILVGLAAMFFSQPLLTLQDDGRPADVIIV-----------------PGGDGAPRAAQAA 51
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
+L+K I++ GD ++ + ++ GV I +E +S T+QNA
Sbjct: 52 QLWKDGCS-----PYILATGDGD------CLLNKHIMMAKGVPPSAILVECRSGSTWQNA 100
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ----HFGINTKASC-SDYLNAYYSIIPL 216
+FS+ +++ + K+ ++V++ +H +R+ F+ + +D + P
Sbjct: 101 RFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTACPQMHFTSSPVADADMPGGFPGTPP- 159
Query: 217 SANFYLTELALKEYIGILIAYYRGN 241
+ E +KEY + G
Sbjct: 160 -----VIEHVVKEYAKLGWYLISGR 179
>gi|251793524|ref|YP_003008253.1| transporter [Aggregatibacter aphrophilus NJ8700]
gi|247534920|gb|ACS98166.1| transporter [Aggregatibacter aphrophilus NJ8700]
Length = 363
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ + I+ LG ++ I I+ R+ +T+ + + H II++GG P
Sbjct: 189 PEQSAIITLGYALNPDGSMHDILIQ-------RLEKTLEIANQ----NPHALIIVTGGVP 237
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
Q + E + L++ G++ I + + T +NA FS + K+ +L+SS
Sbjct: 238 QNN-QTEGALMKQWLIDKGIDAKRIYADNYARSTVENALFSRYSLAKHHIKHAVLISSGS 296
Query: 184 HLKRSQLYFQHFGINTKA 201
H++R + F+ + +
Sbjct: 297 HVRRGRALFEIATLESGP 314
>gi|153832603|ref|ZP_01985270.1| transporter [Vibrio harveyi HY01]
gi|148871169|gb|EDL70047.1| transporter [Vibrio harveyi HY01]
Length = 365
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 15/175 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D IV LG + P + + E + + + + I+++GG P+
Sbjct: 191 DKGAIVTLG-----------YALNPDGSMHQILVERLETTLAMAKANPDALIVLTGGVPK 239
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
H E + + L+E G+ +D I E + T NA FSS + K+ ++SSA H
Sbjct: 240 NHK-TEGKLMADWLIEKGISKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASH 298
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++R Q F+ T + Y PL ++ E +GI R
Sbjct: 299 VRRGQTLFEISSWQTGPQSITFDTVSYPDKPLKDLAKASDG---ELLGIYRDALR 350
>gi|223939730|ref|ZP_03631602.1| protein of unknown function DUF218 [bacterium Ellin514]
gi|223891601|gb|EEF58090.1| protein of unknown function DUF218 [bacterium Ellin514]
Length = 343
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 76/200 (38%), Gaps = 23/200 (11%)
Query: 42 PTILLKHLQFSYQRPL--LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE 99
LL L F + + L +++ ++ V+LG PS R+
Sbjct: 158 GLFLLCLLAFPFAQMLCFGKTDYRRPADVAVVLGA-------RAYADGRPSDALADRVRT 210
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+LY+ + +I SGG P + E+ ++ GV+ DI + L+T
Sbjct: 211 ACQLYRD----GLVKKLIFSGG-PGDGSVHETESMTRMAVQLGVKPQDILTDRAGLNTQA 265
Query: 160 NAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
+ + + ++I++VS YHL R ++ ++ G + + + +
Sbjct: 266 TVNNTERLFSQINARHILVVSHFYHLPRIKMAYRRDGWDVYTVPA-----RETYLLRETP 320
Query: 220 FYLTELALKEYIGILIAYYR 239
+ + +E I + Y +
Sbjct: 321 YMMA----REVAAIWVYYLK 336
>gi|162449130|ref|YP_001611497.1| hypothetical protein sce0860 [Sorangium cellulosum 'So ce 56']
gi|161159712|emb|CAN91017.1| hypothetical protein sce0860 [Sorangium cellulosum 'So ce 56']
Length = 185
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 61/148 (41%), Gaps = 12/148 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV+LG R+ PS + + + + +I SG
Sbjct: 4 RMPLHADAIVVLGC-----------RVFPSGRPAAPGARRAARAAEAYRAGVAPWVIASG 52
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + E+ V +L +GV I + SL T +NA FS+++++ + + +V+
Sbjct: 53 GRRWGAQV-EARVLAAELRRAGVPAHAILQDLWSLTTHENAIFSAALLRRVGARRAAIVT 111
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLN 208
++H+ R+ F GI+ + +
Sbjct: 112 CSWHMARALQNFHDVGIDACGLPASRVG 139
>gi|218676855|ref|YP_002395674.1| hypothetical protein VS_II1096 [Vibrio splendidus LGP32]
gi|218325123|emb|CAV26988.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 365
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 72/179 (40%), Gaps = 17/179 (9%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+ + +L L+ S ++ LL + IV LG + P + +
Sbjct: 169 FATVDRVLETPLKESAEKGLLD-----EHGAIVALG-----------YALNPDGSMHEIL 212
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E + + + + I+++GG P+ H E + + L+ GV +D I E + T
Sbjct: 213 IERLETTLAMSKANPDAMIVLTGGVPKNHK-TEGKLMADWLISKGVSKDRIIEENYATST 271
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
NA FSS + K+ ++SSA H++R Q F+ T + Y PL
Sbjct: 272 VGNALFSSYALARHDIKHATIISSASHVRRGQTLFEIASWQTGPQGITFDTVSYPDKPL 330
>gi|145299864|ref|YP_001142705.1| hypothetical protein ASA_2954 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142852636|gb|ABO90957.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 367
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 15/179 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ KK IV LG + P + + + +S Q + II++G
Sbjct: 189 EKKKGRQAIVTLG-----------YALNPDGSMHEILLGRLETTRSLAQANPAALIILTG 237
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G PQ E + + L++ GV+R I E + T +NA +S + Q + LVS
Sbjct: 238 GVPQNR-QTEGKLMADWLVKKGVDRSRIIEENYATSTVENALYSGYALARHQIQYATLVS 296
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
SA H++R Q + + + + Y PLSA +++ E +GI R
Sbjct: 297 SASHVRRGQTLLEIACWQSGPTGIQIDSVSYPDKPLSALAKVSDS---ELLGIYRDALR 352
>gi|313885551|ref|ZP_07819301.1| putative membrane protein [Eremococcus coleocola ACS-139-V-Col8]
gi|312619281|gb|EFR30720.1| putative membrane protein [Eremococcus coleocola ACS-139-V-Col8]
Length = 339
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 90/236 (38%), Gaps = 27/236 (11%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
MLLS + + + Q IR ++ + + + + LL + +
Sbjct: 102 MLLSAAIIFMVWGAFNLQEIRFENYIDMVIEITLYFIANFLAFCLLNWVLQVFP------ 155
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH-CTIIIS 119
K G ++++LG P + R+ + + Y + + +++
Sbjct: 156 -LKVKGQVLMVLGQKIDNPQQFPRL-------LARRLDQALAYYIAQPLSDQNKIYFLVT 207
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNIIL 178
GG +E+ + L+E GV D I LE + +TFQN + ++ ++ +I+
Sbjct: 208 GGPIAWGDTSEAAEMRDYLIERGVAGDKIILEPLAHNTFQNFYYGRELLVGPLKAAPVIV 267
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+S +H+ RS Y Q G+ + A + +++Y+G L
Sbjct: 268 FTSRFHVLRSYCYGQASGMKATYRGT-----------RVAWYLWPYYLIRDYLGFL 312
>gi|90414191|ref|ZP_01222172.1| hypothetical protein P3TCK_08988 [Photobacterium profundum 3TCK]
gi|90324741|gb|EAS41279.1| hypothetical protein P3TCK_08988 [Photobacterium profundum 3TCK]
Length = 367
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 12/135 (8%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
I+ LG + P + + + + + + + I+++GG P+ H
Sbjct: 195 TAIITLG-----------YALNPDGSMHDILIQRLEMTLAFAKEQPKSLIVLTGGVPKNH 243
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E + + L+E G++R I + + T +NA +SS + + ++SSA H++
Sbjct: 244 K-TEGKLMADWLVEKGIDRSRIIEDNYARSTVENALYSSYALARHDIDHATIISSASHVR 302
Query: 187 RSQLYFQHFGINTKA 201
R Q F+ T
Sbjct: 303 RGQTLFEIASWQTGP 317
>gi|17989186|ref|NP_541819.1| hypothetical protein BMEII0841 [Brucella melitensis bv. 1 str. 16M]
gi|17985041|gb|AAL54083.1| hypothetical protein BMEII0841 [Brucella melitensis bv. 1 str. 16M]
Length = 180
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 71/186 (38%), Gaps = 39/186 (20%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++I++ P R + +L+K + I++
Sbjct: 3 DDGRPADVIIV-----------------PGGDGAPRAAQAAQLWKDGRS-----PYILAT 40
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
GD ++ + ++ GV I +E +S T+QNA+FS+ +++ + K+ ++V+
Sbjct: 41 GDGD------CLLNKHIMMAKGVPPSAILVECRSGSTWQNARFSAPLLRRLHAKSALIVT 94
Query: 181 SAYHLKRSQLYFQ----HFGINTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+ +H +R+ F+ + +D + P + E +KEY +
Sbjct: 95 NWFHSRRAVASFRTACPQMHFTSSPVADADMPGGFPGTPP------VIEHVVKEYAKLGW 148
Query: 236 AYYRGN 241
G
Sbjct: 149 YLISGR 154
>gi|295703757|ref|YP_003596832.1| hypothetical protein BMD_1626 [Bacillus megaterium DSM 319]
gi|294801416|gb|ADF38482.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 198
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 70/178 (39%), Gaps = 47/178 (26%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ IF + ++ F F G ++ ++P+ S ++I++L
Sbjct: 7 KRIKISIFMLGLGIIFFLFAGKELVVN----------EKPVKS-------DVIIVLSGDN 49
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
R+ + + LYK +I+S G + +
Sbjct: 50 ------------------DRLEKGIELYK----KGYASHLILSNGQENN--------FYH 79
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ ESG+ D I LE + T +NA+F+ ++ N ++ I+VSS YH+KR + F
Sbjct: 80 QAKESGIPEDSIILENHATSTTENAKFTKRLMMNYHFQSAIVVSSNYHMKRVEKNFNK 137
>gi|161620495|ref|YP_001594381.1| hypothetical protein BCAN_B0429 [Brucella canis ATCC 23365]
gi|163844593|ref|YP_001622248.1| hypothetical protein BSUIS_B0427 [Brucella suis ATCC 23445]
gi|225686235|ref|YP_002734207.1| hypothetical protein BMEA_B0404 [Brucella melitensis ATCC 23457]
gi|254699682|ref|ZP_05161510.1| hypothetical protein Bsuib55_02296 [Brucella suis bv. 5 str. 513]
gi|254702819|ref|ZP_05164647.1| hypothetical protein Bsuib36_02539 [Brucella suis bv. 3 str. 686]
gi|256015209|ref|YP_003105218.1| Bme2 protein [Brucella microti CCM 4915]
gi|256043322|ref|ZP_05446257.1| hypothetical protein Bmelb1R_02479 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256111677|ref|ZP_05452661.1| hypothetical protein Bmelb3E_03418 [Brucella melitensis bv. 3 str.
Ether]
gi|256262633|ref|ZP_05465165.1| Bme2 [Brucella melitensis bv. 2 str. 63/9]
gi|260564530|ref|ZP_05835015.1| Bme2 protein [Brucella melitensis bv. 1 str. 16M]
gi|260568269|ref|ZP_05838738.1| Bme2 protein [Brucella suis bv. 4 str. 40]
gi|261750147|ref|ZP_05993856.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261753420|ref|ZP_05997129.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265989745|ref|ZP_06102302.1| Bme2 [Brucella melitensis bv. 1 str. Rev.1]
gi|265993148|ref|ZP_06105705.1| Bme2 [Brucella melitensis bv. 3 str. Ether]
gi|294853761|ref|ZP_06794433.1| hypothetical protein BAZG_02742 [Brucella sp. NVSL 07-0026]
gi|297250207|ref|ZP_06933894.1| hypothetical protein BAYG_03205 [Brucella abortus bv. 5 str. B3196]
gi|5478233|gb|AAD43833.1|AF076290_2 Bme2 [Brucella melitensis]
gi|161337306|gb|ABX63610.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
gi|163675316|gb|ABY39426.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|225642340|gb|ACO02253.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
gi|255997869|gb|ACU49556.1| Bme2 protein [Brucella microti CCM 4915]
gi|260152173|gb|EEW87266.1| Bme2 protein [Brucella melitensis bv. 1 str. 16M]
gi|260154934|gb|EEW90015.1| Bme2 protein [Brucella suis bv. 4 str. 40]
gi|261739900|gb|EEY27826.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261743173|gb|EEY31099.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262764018|gb|EEZ10050.1| Bme2 [Brucella melitensis bv. 3 str. Ether]
gi|263000414|gb|EEZ13104.1| Bme2 [Brucella melitensis bv. 1 str. Rev.1]
gi|263092418|gb|EEZ16671.1| Bme2 [Brucella melitensis bv. 2 str. 63/9]
gi|294819416|gb|EFG36416.1| hypothetical protein BAZG_02742 [Brucella sp. NVSL 07-0026]
gi|297172960|gb|EFH32338.1| hypothetical protein BAYG_03205 [Brucella abortus bv. 5 str. B3196]
gi|326410585|gb|ADZ67649.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326553876|gb|ADZ88515.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 205
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 80/205 (39%), Gaps = 40/205 (19%)
Query: 43 TILLKHLQFSYQRPLLS-PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
IL+ + +PLL+ + ++I++ P R +
Sbjct: 9 AILVGLAAMFFSQPLLTLQDDGRPADVIIV-----------------PGGDGAPRAAQAA 51
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
+L+K + I++ GD ++ + ++ GV I +E +S T+QNA
Sbjct: 52 QLWKDGRS-----PYILATGDGD------CLLNKHIMMAKGVPPSAILVECRSGSTWQNA 100
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ----HFGINTKASC-SDYLNAYYSIIPL 216
+FS+ +++ + K+ ++V++ +H +R+ F+ + +D + P
Sbjct: 101 RFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTACPQMHFTSSPVADADMPGGFPGTPP- 159
Query: 217 SANFYLTELALKEYIGILIAYYRGN 241
+ E +KEY + G
Sbjct: 160 -----VIEHVVKEYAKLGWYLISGR 179
>gi|169823893|ref|YP_001691504.1| hypothetical protein FMG_0196 [Finegoldia magna ATCC 29328]
gi|167830698|dbj|BAG07614.1| putative membrane protein [Finegoldia magna ATCC 29328]
Length = 308
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 86/199 (43%), Gaps = 24/199 (12%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ Y ++ ++ KIF + +++ + ++ + LL +L YQ+ + D + I
Sbjct: 89 LLYIAMIIVNLFKIFDLYKYIIGMNLYLSLMVLSHLLGNLIIKYQK------FDTDFDYI 142
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG IE S R+ + Y + K +I SGG +
Sbjct: 143 VVLGG--------SMKGIELSELIKQRMLTSFAYYTTNKS-----IMIFSGGKSNG-DIE 188
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ----GKNIILVSSAYHL 185
ES+ N +E+ ++ DI LE +++T QN ++ +I+ K I ++++ +H
Sbjct: 189 ESVAMKNFAIENHIQDTDILLEKLAMNTMQNIEYVKKLIQQQDTDFVDKKICVITNNFHA 248
Query: 186 KRSQLYFQHFGINTKASCS 204
R++L +N +
Sbjct: 249 FRTKLICNKMKVNWTVIPT 267
>gi|319442395|ref|ZP_07991551.1| protein [Corynebacterium variabile DSM 44702]
Length = 196
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 13/134 (9%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG P + R+ L ++ + +I+SGG Q
Sbjct: 71 IVVLGARLDEDCARPQVLD-------DRLDAATELSRTHLLN----PVIVSGGATQTDCP 119
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ + L E GV + + +E +S T N Q + SMI + G ++V+S+ H R+
Sbjct: 120 TEAAAMESGLHERGV-TNQVLIEDESDSTVANVQNTKSMISDRGGL-AVVVTSSPHNVRA 177
Query: 189 QLYFQHFGINTKAS 202
F+ GI A
Sbjct: 178 LQNFRDAGIEAVAY 191
>gi|145296228|ref|YP_001139049.1| hypothetical protein cgR_2145 [Corynebacterium glutamicum R]
gi|140846148|dbj|BAF55147.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 225
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 77/212 (36%), Gaps = 26/212 (12%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLL-SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
F+ ++ T +++ +L +P + + I++LG PS Q
Sbjct: 4 FLAKSLLLTAVVQPALRVVAYSMLRTPNNRHRIDSILVLG--------TAQYDGVPSRQF 55
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
+R+ +L++ + + GG E+ V L++ GV+ D I
Sbjct: 56 AARLRHAAKLWRLHEIQH----VYTVGGKLPGDRFTEAEVAREYLIKEGVDPDLIFASAV 111
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
DT S + + +++V+ H R+ + G + K S + Y A +
Sbjct: 112 GNDTVS----SYEALDPEKLGRVLIVTDPNHSYRAVRIARRMGFDAKPSPTTYSPAKF-- 165
Query: 214 IPLSANFYLTELALKEYIGILIA---YYRGNR 242
P F E+ G+++ + G R
Sbjct: 166 -PSIVYFLTLS---HEWGGVVVQDVSWLLGER 193
>gi|257876412|ref|ZP_05656065.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
gi|257810578|gb|EEV39398.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
Length = 371
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+D ++ +LLG + +R+ ++L + + II++GG P
Sbjct: 192 EDNHLFILLGYALDDEGQMQE-------TLNNRLEHALKLL----EKNPTAKIIVTGGVP 240
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-IILVSSA 182
+K E+ + + L+E+G++ I E + DT +NA FS + + N I ++SSA
Sbjct: 241 KKEN-TEAKLMHQWLIENGIDEKRIIQEALATDTIENALFSIDLANELDFSNKITVISSA 299
Query: 183 YHLKRSQLYFQHF 195
H++R ++ F+
Sbjct: 300 SHVRRGKVLFETA 312
>gi|293607329|ref|ZP_06689669.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292814279|gb|EFF73420.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 184
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 64/176 (36%), Gaps = 22/176 (12%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ ++ ++LG +PS + +R+ Y + M C ++ G
Sbjct: 29 RPADVAIVLG-------NTVLPTGQPSPRLAARLDRAYDCYAA-----MQCRLVFVSGGV 76
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
G E+ V + L+ GV + I ++ +++ A+ +S+ ++ ++V+ +
Sbjct: 77 DPAGADEAAVMRDYLIARGVPAERIVTDSAGDNSWATARHASAYMREHGYTRALVVTQYF 136
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
H+ R+ L + G+ + + + +E + R
Sbjct: 137 HVPRTVLALRRHGVADVSGGYPQFFEWRDLYS----------IFRELPAVAWYSLR 182
>gi|284990206|ref|YP_003408760.1| hypothetical protein Gobs_1673 [Geodermatophilus obscurus DSM
43160]
gi|284063451|gb|ADB74389.1| protein of unknown function DUF218 [Geodermatophilus obscurus DSM
43160]
Length = 209
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 63/180 (35%), Gaps = 18/180 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV+LG+ PS +R+ + LY + + ++ G
Sbjct: 38 DAQPASDAIVVLGS--------AQYNGVPSSIFEARLEHALALY----EEGVAPVVVTVG 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ L E+G+ D + + +DT ++ + + + +LV+
Sbjct: 86 GKADGDQFTEAESGRAYLTEAGIPEDALLAVEEGVDTLESMRAVGAAFDERGWSSAVLVT 145
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+H R++ + GI +S + A + L+E L+ G
Sbjct: 146 DPWHAMRAERMAEDAGITADSSPTRQGPAVQTRATQFRYI------LRETAAYLLYRATG 199
>gi|297587158|ref|ZP_06945803.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
gi|297575139|gb|EFH93858.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
Length = 308
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 88/200 (44%), Gaps = 26/200 (13%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ Y ++ ++ KIF + +++ + ++ + LL +L Y++ D + I
Sbjct: 89 ILYIAMIIVNLFKIFDLYKYIIGMNLYLSLMVLSHLLGNLIIKYRK------IATDFDYI 142
Query: 70 VLLGNGTTIIP-TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
V+LG I + P + + SY R +++ +I SGG +
Sbjct: 143 VVLGGSMKGIELSDPIKQRMLTSFSYYRTDKSI--------------MIFSGGKSNG-DI 187
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG----KNIILVSSAYH 184
ES+ N +++ ++ DI LE +++T QN ++ ++I+ K + ++++ +H
Sbjct: 188 EESVAMKNFAVQNNIQDTDILLEKLAMNTMQNIEYVKTLIQQQDAEHDRKKVCVITNNFH 247
Query: 185 LKRSQLYFQHFGINTKASCS 204
R++L +N +
Sbjct: 248 AFRTKLICNKMKVNWTVIPA 267
>gi|325830373|ref|ZP_08163830.1| hypothetical protein HMPREF9404_3217 [Eggerthella sp. HGA1]
gi|325487840|gb|EGC90278.1| hypothetical protein HMPREF9404_3217 [Eggerthella sp. HGA1]
Length = 236
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 68/183 (37%), Gaps = 19/183 (10%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+ C +++ + + TI + P + D + IV+LG T
Sbjct: 25 LMLGCMLVVVAVFAATNVATIATT--KDRIVEPQAA--VGFDADAIVVLGASVFADGT-- 78
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
PS R+ + + LYK + +I+SG D E V + + GV
Sbjct: 79 -----PSGILRDRLDDGIALYKE----GVAPKLIMSG-DNSTVSYNEVQVMKDYAISQGV 128
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
DI + T+++ + + + I++ + YHL R+ Q G+ +
Sbjct: 129 PSYDIFCDHAGFSTYESMYRAKHV---FGAERIVVATQTYHLYRALYAAQGLGLESLGVA 185
Query: 204 SDY 206
SDY
Sbjct: 186 SDY 188
>gi|254446112|ref|ZP_05059588.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235]
gi|198260420|gb|EDY84728.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235]
Length = 172
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 14/129 (10%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG+ + R + L+K+ C I+++GG +
Sbjct: 9 IVVLGS-------PNGDDGRLFGVAEERCVAAVGLWKA----EPDCRILLTGGFGEHFNR 57
Query: 129 AE---SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
E + +L+E G+ + SL+T ++A + +I K ++V+S YHL
Sbjct: 58 TETAHAEYLKRRLVELGIPGNRFLEFALSLNTLEDASKAKPIIAESGAKRCVVVTSDYHL 117
Query: 186 KRSQLYFQH 194
R+ F+
Sbjct: 118 DRASYVFRR 126
>gi|306845690|ref|ZP_07478259.1| Bme2 protein [Brucella sp. BO1]
gi|306274011|gb|EFM55838.1| Bme2 protein [Brucella sp. BO1]
Length = 205
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 79/204 (38%), Gaps = 38/204 (18%)
Query: 43 TILLKHLQFSYQRPLLS-PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
ILL + +PLL+ + ++I++ P R +
Sbjct: 9 AILLGLAAMFFSQPLLTLQDDGRPADVIIV-----------------PGGDGAPRAAQAA 51
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
+L+K + I++ GD ++ + ++ GV I +E +S T+QNA
Sbjct: 52 QLWKDGRS-----PYILATGDGD------CLLNKHIMIAKGVPPSAILVECRSGSTWQNA 100
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ----HFGINTKASCSDYLNAYYSIIPLS 217
+FS+ +++ + K+ ++V++ +H +R+ F+ + + S P
Sbjct: 101 RFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTACPQMHFASSPVADADMPGGLSGTPP- 159
Query: 218 ANFYLTELALKEYIGILIAYYRGN 241
+ E +KEY + G
Sbjct: 160 ----VIEHVVKEYAKLGWYLISGR 179
>gi|117618144|ref|YP_857439.1| transporter [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559551|gb|ABK36499.1| transporter [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 320
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 15/178 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV LG + P + + + ++ + + II++GG
Sbjct: 143 PKPGNRAIVTLG-----------YALNPDGSMHDILLGRLETTRALAKANPAALIILTGG 191
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
PQ E + + L++ G++R I E + T +NA +S + Q + LVSS
Sbjct: 192 VPQNR-QTEGKLMADWLVKKGIDRSRIIEENYATSTVENALYSGYALARHQIEYATLVSS 250
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
A H++R Q + + + + Y PLS +++ E +GI R
Sbjct: 251 ASHVRRGQTLLEIASWQSGPAGIRIDSVSYPDKPLSELAKVSDS---ELLGIYRDALR 305
>gi|300933213|ref|ZP_07148469.1| putative secreted protein [Corynebacterium resistens DSM 45100]
Length = 229
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 75/221 (33%), Gaps = 20/221 (9%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
FF + FI ++ L+ ++ ++ +II +LG
Sbjct: 17 AFFGGIARTITYFIFGTLLVIALITATTATHVWSFARADDRQQADIIFVLGA-------- 68
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES- 141
+PS +R+ LYK + I+ G E+ N L+
Sbjct: 69 AQYNGKPSKWLAARLDHAAELYKE----GVAPKIVTVGYKKDGDKFTEAEAGKNYLVSDY 124
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV D+ +DT +A+ S ++ ++V+ H R+ Q G++
Sbjct: 125 GVPESDVIALGTGVDTISSAEALHSEAQSRGWSTAVVVTDPGHSLRATTMVQDQGLDAWG 184
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
S + S +S+ L E +G++ Y R
Sbjct: 185 SPT------RSGPSVSSRAAQVSSILHETLGLM-YYKTAQR 218
>gi|23308921|ref|NP_601474.2| hypothetical protein NCgl2194 [Corynebacterium glutamicum ATCC
13032]
gi|21325045|dbj|BAB99667.1| Uncharacterized ACR [Corynebacterium glutamicum ATCC 13032]
Length = 225
Score = 83.8 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 77/212 (36%), Gaps = 26/212 (12%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLL-SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
F+ ++ T +++ +L +P + + I++LG PS Q
Sbjct: 4 FLAKSLLLTAVVQPALRVVAYSMLRTPNNRHKIDSILVLG--------TAQYDGVPSRQF 55
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
+R+ +L++ + + GG E+ V L++ GV+ D I +
Sbjct: 56 AARLRHAAKLWRLHEIQH----VYTVGGKLPGDRFTEAEVAREYLIKEGVDPDLIFVSAV 111
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
DT S + + +++V+ H R+ + G + K S + Y A +
Sbjct: 112 GNDTVS----SYEALDPEKLGRVLIVTDPNHSYRAVRIARRMGFDAKPSPTTYSPAKF-- 165
Query: 214 IPLSANFYLTELALKEYIGILIA---YYRGNR 242
P F E+ G+++ G R
Sbjct: 166 -PSIVYFLTLS---HEWGGVVVQDVSRLLGER 193
>gi|23500175|ref|NP_699615.1| Bme2 protein [Brucella suis 1330]
gi|23463775|gb|AAN33620.1| Bme2 protein [Brucella suis 1330]
Length = 205
Score = 83.8 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 80/205 (39%), Gaps = 40/205 (19%)
Query: 43 TILLKHLQFSYQRPLLS-PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
IL+ + +PLL+ + ++I++ P R +
Sbjct: 9 AILVGLAAMFFSQPLLTLQDDGRPADVIIV-----------------PGGDGAPRAAQAA 51
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
+L+K + I++ GD ++ + ++ GV I +E +S T+QNA
Sbjct: 52 QLWKDGRS-----PYILATGDGD------CLLNKHIMMAKGVPPSAILVECRSGSTWQNA 100
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ----HFGINTKASC-SDYLNAYYSIIPL 216
+FS+ +++ + K+ ++V++ +H +R+ F+ + +D + P
Sbjct: 101 RFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTACPQMHFTSSPVADADMPGGFPGTPP- 159
Query: 217 SANFYLTELALKEYIGILIAYYRGN 241
+ E +KEY + G
Sbjct: 160 -----VIEHVVKEYAKLGWYLISGR 179
>gi|148558293|ref|YP_001257412.1| Bme2 protein [Brucella ovis ATCC 25840]
gi|148369578|gb|ABQ62450.1| Bme2 protein [Brucella ovis ATCC 25840]
Length = 205
Score = 83.8 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 81/205 (39%), Gaps = 40/205 (19%)
Query: 43 TILLKHLQFSYQRPLLS-PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
IL+ + +PLL+ + ++I++ P R +
Sbjct: 9 AILVGLAAMFFSQPLLTLQDDGRPADVIIV-----------------PGGDGAPRAAQAA 51
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
+L+K + I++ GD ++ + ++ GV I +E +S T+QNA
Sbjct: 52 QLWKDGRS-----PYILATGDGD------CLLNKHIMMAKGVPPSAILVECRSGSTWQNA 100
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ----HFGINTKASC-SDYLNAYYSIIPL 216
+FS+ +++ + K+ ++V++ +H +R+ F+ + +D + I P+
Sbjct: 101 RFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTACPQMHFTSSPVADADMPGGFPGIPPV 160
Query: 217 SANFYLTELALKEYIGILIAYYRGN 241
+ +KEY + G
Sbjct: 161 IKH------VVKEYAKLGWYLISGR 179
>gi|315652504|ref|ZP_07905488.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315485220|gb|EFU75618.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 268
Score = 83.8 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/259 (15%), Positives = 99/259 (38%), Gaps = 51/259 (19%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
+ F+ + L+ + K + + +++ GI+ ++ +Q S P +
Sbjct: 33 GFAFVFFAMGKLIKFYLNKRIPLWSVVSVYTLATLGIL-IFIITSIQISLSLPKED---E 88
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ +++LG + + R+ + + ++ I+ISGG
Sbjct: 89 PGLDFLIILG--------TKPDLEKKGSECKYRLDKAIE----YIDNNPDTIIVISGGIG 136
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-------------- 169
+ + ES+ + L+++G+++++I +E QS +T QN +S ++I
Sbjct: 137 RDKKI-ESMEMADYLIKNGIDKNNILVEIQSHNTRQNLIYSKALIDRYNSDIKRRTDITI 195
Query: 170 ----------NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSAN 219
+ + I ++++ +H+ RS L + G Y Y +
Sbjct: 196 VNDMGPVLEVEDKPQTIGILTNDFHIFRSMLIAKRVG---------YTQVYPISARSNRV 246
Query: 220 FYLTELALKEYIGILIAYY 238
YL + ++E I +
Sbjct: 247 LYL-HMLVRETFAIFKYKF 264
>gi|332978226|gb|EGK14957.1| hypothetical protein HMPREF9373_0568 [Psychrobacter sp. 1501(2011)]
Length = 312
Score = 83.8 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 18/134 (13%)
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
Q II++G ES + L G+ ++I E S++T +NA+F++
Sbjct: 165 MWHQRQKPLPIILTG--------VESAWMQDWLNNHGI--ENIITENASMNTCENARFTA 214
Query: 166 SMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTEL 225
K + +++ L++ AYH+ R++ F GI+ + L + N +
Sbjct: 215 ---KRLNLQDVYLITDAYHMTRARRQFALNGIHALPIPA-ALPMKKGWLAPKNNAQHSRR 270
Query: 226 ALKEYIGILIAYYR 239
+ E L AY R
Sbjct: 271 TVYE----LAAYAR 280
>gi|54302669|ref|YP_132662.1| hypothetical protein PBPRB0990 [Photobacterium profundum SS9]
gi|46916093|emb|CAG22862.1| putative exported protein [Photobacterium profundum SS9]
Length = 366
Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ P + + + + + + + I+++GG P+ H E + + L+E G+
Sbjct: 200 GYALNPDGSMHDILIQRLEMTLAFAKKQPKSLIVLTGGVPKNHK-TEGKLMADWLVEKGI 258
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+R I + + T +NA +SS + + ++SSA H++R Q F+ T
Sbjct: 259 DRSRIIEDNYARSTVENALYSSYALARHDIDHATIISSASHVRRGQTLFEIASWQTGP 316
>gi|225628868|ref|ZP_03786902.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254706062|ref|ZP_05167890.1| hypothetical protein BpinM_03433 [Brucella pinnipedialis
M163/99/10]
gi|254712252|ref|ZP_05174063.1| hypothetical protein BcetM6_02514 [Brucella ceti M644/93/1]
gi|254715323|ref|ZP_05177134.1| hypothetical protein BcetM_02529 [Brucella ceti M13/05/1]
gi|256029727|ref|ZP_05443341.1| hypothetical protein BpinM2_03558 [Brucella pinnipedialis
M292/94/1]
gi|256157879|ref|ZP_05455797.1| hypothetical protein BcetM4_03368 [Brucella ceti M490/95/1]
gi|256253159|ref|ZP_05458695.1| hypothetical protein BcetB_02424 [Brucella ceti B1/94]
gi|260167184|ref|ZP_05753995.1| Bme2 protein [Brucella sp. F5/99]
gi|261217053|ref|ZP_05931334.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261220265|ref|ZP_05934546.1| Bme2 [Brucella ceti B1/94]
gi|261313499|ref|ZP_05952696.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261319923|ref|ZP_05959120.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261756588|ref|ZP_06000297.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265986738|ref|ZP_06099295.1| Bme2 [Brucella pinnipedialis M292/94/1]
gi|265996388|ref|ZP_06108945.1| Bme2 [Brucella ceti M490/95/1]
gi|225616714|gb|EEH13762.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|260918849|gb|EEX85502.1| Bme2 [Brucella ceti B1/94]
gi|260922142|gb|EEX88710.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292613|gb|EEX96109.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261302525|gb|EEY06022.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261736572|gb|EEY24568.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|262550685|gb|EEZ06846.1| Bme2 [Brucella ceti M490/95/1]
gi|264658935|gb|EEZ29196.1| Bme2 [Brucella pinnipedialis M292/94/1]
Length = 205
Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 67/154 (43%), Gaps = 29/154 (18%)
Query: 43 TILLKHLQFSYQRPLLS-PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
IL+ + +PLL+ + ++I++ P R +
Sbjct: 9 AILVGLAAMFFSQPLLTLQDDGRPADVIIV-----------------PGGDGAPRAAQAA 51
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
+L+K + I++ GD ++ + ++ GV I +E +S T+QNA
Sbjct: 52 QLWKDGRS-----PYILATGDGD------CLLNKHIMMAKGVPPSAILVECRSGSTWQNA 100
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+FS+ +++ + K+ ++V++ +H +R+ F+
Sbjct: 101 RFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTA 134
>gi|293391137|ref|ZP_06635471.1| transporter [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290951671|gb|EFE01790.1| transporter [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 363
Score = 83.4 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ +T+ + K + II++GG PQ + E + L+ G++ I + +
Sbjct: 214 RLEKTLEIAKQ----NPDALIIVTGGVPQNN-RTEGALMKQWLINKGIDAKRIYADNYAR 268
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
T +NA FS + K+ L+SS H++R + F+ + +
Sbjct: 269 STVENALFSRYALAKHHIKHAALISSGSHVRRGRALFEIAALESGP 314
>gi|167755531|ref|ZP_02427658.1| hypothetical protein CLORAM_01045 [Clostridium ramosum DSM 1402]
gi|237734279|ref|ZP_04564760.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|167704470|gb|EDS19049.1| hypothetical protein CLORAM_01045 [Clostridium ramosum DSM 1402]
gi|229382509|gb|EEO32600.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 406
Score = 83.4 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 21/148 (14%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + V+LG T+ + R+ + + Q + I+++GG
Sbjct: 95 PNDNTHAFVVLGFALKSDGTMQP-------ELVGRLETAL----ASAQKYPNSYILVTGG 143
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILVS 180
+K+G E ++ L+E GV + I +E +S +T QNA+FS ++ N K+I +++
Sbjct: 144 -VKKNGWTEGDRMHDWLVEHGVADNRILVENKSANTAQNAEFSFDILYNHPTIKSISMIT 202
Query: 181 SAYHLKR--------SQLYFQHFGINTK 200
S YHLKR S + + G
Sbjct: 203 SQYHLKRGTILYYAESLIRARELGKTPI 230
>gi|298244343|ref|ZP_06968149.1| protein of unknown function DUF218 [Ktedonobacter racemifer DSM
44963]
gi|297551824|gb|EFH85689.1| protein of unknown function DUF218 [Ktedonobacter racemifer DSM
44963]
Length = 239
Score = 83.0 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 75/224 (33%), Gaps = 41/224 (18%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
+ I + I + L ++ + + + IV+L GT
Sbjct: 7 VLWAISAITLSFIFIWLLFYTRGKRFALRDKLQKVDAIVVL-AGTRGNVE---------- 55
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISG--------------------GDPQKHGLAES 131
+ ++ RLY+ + C S G Q+ +A +
Sbjct: 56 FLHKKVETAARLYRDGWAKHIICGGKFSAKVTDSPQLMSQEELRLAVDQGRIQEKDIARA 115
Query: 132 IV----------YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+K + GV D I LE +SL T + A++ +++ + IILV+S
Sbjct: 116 AATWDIALGARYMRDKAMAYGVPDDAIVLEEESLHTRETAEYVLDIVQKHKWYKIILVTS 175
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTEL 225
+H R+ L F + S+Y S P++ +
Sbjct: 176 PFHQLRTYLTFAKVFLPYDIQISNYYADSDSWHPMAWFLSKSNR 219
>gi|261364338|ref|ZP_05977221.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
gi|288567599|gb|EFC89159.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
Length = 197
Score = 83.0 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 81/213 (38%), Gaps = 24/213 (11%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L+F + + + L + + L + + V+L T +
Sbjct: 6 LVFILVLFFTAALLPLWIMWRDFWVSRLDADTVRPADAAVVL-------STRAYEGGRLN 58
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
+R+ + LY++ K ++++GG + + + + GV + DI
Sbjct: 59 PCLVARVEAAVELYRARKVK----KLVMTGG-VSRDLQSSAGNMQMIAEKMGVSKADIIQ 113
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH--FGINTKASCSDYLN 208
E ++ +TF+N FS I+N +++VS+ +HL R+++ G + + + + +
Sbjct: 114 EREAGNTFENIVFSRKFIENSP--RVVIVSAGFHLARARMMADRQWQGHDIQVYAAPFCS 171
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
Y + L+E + +G
Sbjct: 172 EPYGGYGFT--------VLRESAAFVKNALKGR 196
>gi|229916781|ref|YP_002885427.1| hypothetical protein EAT1b_1054 [Exiguobacterium sp. AT1b]
gi|229468210|gb|ACQ69982.1| protein of unknown function DUF218 [Exiguobacterium sp. AT1b]
Length = 166
Score = 83.0 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 14/126 (11%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG PS RI K+ +I +GG G
Sbjct: 11 FVIILGA--------KVNGTRPSRALRHRIDVAAAYAKAHPHVE----LIATGGQGPDEG 58
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+AE+ V +L+ G++ I +E S T +N + S + + +V++ +H+ R
Sbjct: 59 MAEARVIERELMAQGIDATRIHVEATSTSTIENFEHSR--LFWDGASGVTIVTNDFHVPR 116
Query: 188 SQLYFQ 193
++L +
Sbjct: 117 ARLIAR 122
>gi|148652582|ref|YP_001279675.1| hypothetical protein PsycPRwf_0773 [Psychrobacter sp. PRwf-1]
gi|148571666|gb|ABQ93725.1| protein of unknown function DUF218 [Psychrobacter sp. PRwf-1]
Length = 300
Score = 83.0 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 56/271 (20%), Positives = 95/271 (35%), Gaps = 58/271 (21%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIP--TILLKHLQF--------SYQRPLL 58
I++ LL S+ F + + IP ++ L + S P L
Sbjct: 16 IIAVIMLLMLSVASFFTPLFSTIGLWVLNHLPIPEANHAMRPLIYDLNANQAESATAPTL 75
Query: 59 SPQWK--KDGNIIVLLGNGTTII------------------------PTIPAIRIEPSFQ 92
W+ + V+LG G T P+ PA + P
Sbjct: 76 PLNWRSEHEPTAYVVLGGGLTEADHKPNRQKSAIANKGSDTHVANRPPSSPAQKNTPQLS 135
Query: 93 SYSRIFETMRLYKSC----KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
S + L + II++G E+ + LL G+ D+I
Sbjct: 136 PNSIVLNQYSLNRMQTVIWHYKKKPLPIILTG--------VEAPWMRDWLLNYGI--DNI 185
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
E S++T +NA+F++ K + ++ L++ AYH+ R++ F I+T + L
Sbjct: 186 ITENASMNTCENARFTA---KRLNLSDVYLITDAYHMTRTRRQFALNNIHTSPIVAP-LP 241
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S + N + L E L AY R
Sbjct: 242 MQKSWLHPKDNAQHSRRTLYE----LAAYAR 268
>gi|261866989|ref|YP_003254911.1| transporter [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261412321|gb|ACX81692.1| transporter [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 363
Score = 83.0 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 12/138 (8%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ I+ LG ++ I I+ R+ +T+ + K + II++GG P
Sbjct: 189 PADSAIITLGYALNPDGSMHDILIQ-------RLEKTLEIAKQ----NPDALIIVTGGVP 237
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
Q + E + L+ G++ I + + T +NA FS + K+ L+SS
Sbjct: 238 QNN-RTEGALMKQWLINKGIDAKRIYADNYARSTVENALFSRYALAKHHIKHASLISSGS 296
Query: 184 HLKRSQLYFQHFGINTKA 201
H++R Q F+ + +
Sbjct: 297 HVRRGQALFEIAALESGP 314
>gi|126728434|ref|ZP_01744250.1| hypothetical protein SSE37_20627 [Sagittula stellata E-37]
gi|126711399|gb|EBA10449.1| hypothetical protein SSE37_20627 [Sagittula stellata E-37]
Length = 156
Score = 83.0 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 53/125 (42%), Gaps = 10/125 (8%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
++ +GG G +E+ V E+GV + LE + +T +N S ++ M+ +
Sbjct: 42 LLATGGALWG-GPSEAEVIARLCAEAGVPETALVLEEAARNTRENIALSLPLLARMEARR 100
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+++V+ H R++L + G+ SC +P + ++E +
Sbjct: 101 VVIVTDRAHAPRARLVARRHGLEAAVSC---------PVPAPWSLGRARGVMREKVAYGW 151
Query: 236 AYYRG 240
+ RG
Sbjct: 152 YWLRG 156
>gi|320106656|ref|YP_004182246.1| hypothetical protein AciPR4_1429 [Terriglobus saanensis SP1PR4]
gi|319925177|gb|ADV82252.1| protein of unknown function DUF218 [Terriglobus saanensis SP1PR4]
Length = 223
Score = 83.0 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 85/229 (37%), Gaps = 26/229 (11%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++ F+LL G + + + + + + I + G
Sbjct: 12 KKSHPLWMFFLFVLLLCIAWCGWVYFQINR---------VARGDEARGADAIAVFGAAQY 62
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH-GLAESIVYNN 136
+ PS ++R+ + LY+ S+ +I GG K G E V +
Sbjct: 63 L--------GHPSPVYHARLDHAVTLYR----RSIAPIVITLGGSGDKRSGATEGGVGRD 110
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
LL +G+ D I ET+S+DT Q A+ +++ I++VS + HL R + G
Sbjct: 111 YLLANGIPFDHIIAETRSIDTEQQAESLATIAHVRGLHRIVVVSDSTHLFRIRELCHEQG 170
Query: 197 INTKASCSDYLNAYYSIIPLSAN----FYLTELALKEYIGILIAYYRGN 241
++ S L + + F T L + IG L + G
Sbjct: 171 LDVLTSPRPTLGRISAYDAFTRTMHEIFSYTFLRMHLNIGWLHRWLEGR 219
>gi|227537805|ref|ZP_03967854.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227242419|gb|EEI92434.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 187
Score = 82.6 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 59/155 (38%), Gaps = 16/155 (10%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
I+++LG S + R+ Y++ M C +GG
Sbjct: 26 TIVLILGA-------PNDAMGNLSQIAKDRLDHACNFYQANPDVRMVC----TGGFGAHF 74
Query: 127 GLAESIVY---NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E Y L++ G+ I S +T ++ + S +I + +I+++S +
Sbjct: 75 NNTEKPHYFYSRKYLIDKGIPDTAILDGPLSTNTVEDFKLSKELISQLNPDILIVITSDF 134
Query: 184 HLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPL 216
H++R+ + ++ F G + + +IPL
Sbjct: 135 HMQRAGILYRRFIDGAKVLFMPAPSSLSEAELIPL 169
>gi|172063895|ref|YP_001811546.1| hypothetical protein BamMC406_4882 [Burkholderia ambifaria MC40-6]
gi|171996412|gb|ACB67330.1| protein of unknown function DUF218 [Burkholderia ambifaria MC40-6]
Length = 219
Score = 82.6 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 82/223 (36%), Gaps = 28/223 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
Q +++ +L +F I+ ++L + ++ V+ GN
Sbjct: 2 KQRLKRGCMARIGRVLAAFACLWIVAAVVLVGAGMRMP--------SEPADVAVIFGNAL 53
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
P +R+ +R Y+ + C + G GL E+ +
Sbjct: 54 DDH-------GAPKPVLAARLDVGVRCYREGQ-----CPAFLVSGAIDGPGLNEATAMRD 101
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+ GV + I ++ Q +T AQ + + ++ + ++++S YHL R++L F+ G
Sbjct: 102 YLVARGVPAERIAVDDQGDNTLATAQHTRAYLQAHRLSRVLIISQYYHLARARLAFERVG 161
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
I + ++ AY P + +E + R
Sbjct: 162 I----AGANISAAY----PHHFQLRDIYSSWREVPAYAVYVLR 196
>gi|269104576|ref|ZP_06157272.1| hypothetical protein VDA_000733 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161216|gb|EEZ39713.1| hypothetical protein VDA_000733 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 363
Score = 82.6 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 15/179 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ K I+ LG + P + E + + + + II++G
Sbjct: 185 EPKAGNTAIITLG-----------YALNPDGTMSDILIERLNMTLKIAKEQPNSLIILTG 233
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G PQ + E + + L++ G+ + + + + T +NA +SS + + ++ ++S
Sbjct: 234 GVPQNN-QTEGRLMADWLIKQGINPNRLIEDNYARSTVENALYSSYALARHKIEHATIIS 292
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
SA H++R Q F+ T + PL E +GI R
Sbjct: 293 SASHVRRGQTLFEIASWQTGPQNITFDTIGAPDKPLEE-LAKPSQG--ELLGIYRDALR 348
>gi|256392318|ref|YP_003113882.1| hypothetical protein Caci_3132 [Catenulispora acidiphila DSM 44928]
gi|256358544|gb|ACU72041.1| protein of unknown function DUF218 [Catenulispora acidiphila DSM
44928]
Length = 236
Score = 82.6 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 68/187 (36%), Gaps = 24/187 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+S R+++ + ++ F P + YQR + ++ ++ G G
Sbjct: 14 RKSQRRLYQAAALAVVLMF-----APVTAVHAYASPYQRSAAAVPYEPVA---IVFGAG- 64
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
A PS R+ + LY+ K T+I+ GD + E
Sbjct: 65 -------APGGRPSPYLSRRLDVALDLYRRGKV-----TVILVTGDNSQPDYDEPSAMRQ 112
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+E GV I + DT+ + + + + + LV+ +HL R+ L + G
Sbjct: 113 YLVERGVPAARIVRDFAGFDTWASCERAKKI---FGVDHATLVTQDFHLPRALLLCRAAG 169
Query: 197 INTKASC 203
I+
Sbjct: 170 IDAYGVA 176
>gi|320107145|ref|YP_004182735.1| hypothetical protein AciPR4_1937 [Terriglobus saanensis SP1PR4]
gi|319925666|gb|ADV82741.1| protein of unknown function DUF218 [Terriglobus saanensis SP1PR4]
Length = 204
Score = 82.2 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 12/128 (9%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ I++LG PT P P+ + R+ E +R ++ II++G +
Sbjct: 40 DAIIVLGC-----PTKPDGS--PTPEQRERVLEGVREFRKGVSDH----IIMTG-AAAHN 87
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E+ +GV + E Q+ +T QN +S +++ ++SS HL
Sbjct: 88 QFVEAHSMALLAEANGVPASAVIEEDQAQNTVQNIYYSEKIMEKSGWHTTEVISSPSHLP 147
Query: 187 RSQLYFQH 194
R+ L H
Sbjct: 148 RTALILHH 155
>gi|225386502|ref|ZP_03756266.1| hypothetical protein CLOSTASPAR_00249 [Clostridium asparagiforme
DSM 15981]
gi|225047421|gb|EEG57667.1| hypothetical protein CLOSTASPAR_00249 [Clostridium asparagiforme
DSM 15981]
Length = 253
Score = 82.2 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 58/142 (40%), Gaps = 15/142 (10%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ I++LG G PS R+ + + LY + + +++SG D +
Sbjct: 79 DCILVLGCGVRDD-------GSPSGMLNDRLLQGIALYNA----GVSDRLLMSG-DHGRV 126
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E + ++ GV +DI ++ T+++ + + + + I++V+ YH+
Sbjct: 127 DYDEVNLMKQFAIDHGVPSEDIFMDHAGFSTYESMYRARDIFQA---ERIVVVTQEYHMY 183
Query: 187 RSQLYFQHFGINTKASCSDYLN 208
R+ G++ SD
Sbjct: 184 RALYNAGQMGMDAYGVASDPRK 205
>gi|31616142|gb|AAP55236.1| unknown [Staphylococcus aureus]
Length = 204
Score = 81.8 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 66/157 (42%), Gaps = 16/157 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + V+LG + + + ++ R+ ++ K ++ II+SG
Sbjct: 38 DFNNRRHAYVVLGTSLSKDGNLKS-------ETVKRLNTCLKAKKKNEKSY----IIVSG 86
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G P +G ++ V L + V+ + I E +S DT +NA + + + +++
Sbjct: 87 GRPV-NGKTQANVMKKWLKQHSVKEEFIITEQESEDTLENAIETLKLADRRGINTLSIIT 145
Query: 181 SAYHLKRSQLYFQHFG----INTKASCSDYLNAYYSI 213
+ H +R+ L F+ +N D +N +++
Sbjct: 146 NGSHARRATLIFKKLDKNNKVNEIIIPKDEINTRFTL 182
>gi|254711639|ref|ZP_05173450.1| hypothetical protein BpinB_15584 [Brucella pinnipedialis B2/94]
gi|261319263|ref|ZP_05958460.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261298486|gb|EEY01983.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
Length = 205
Score = 81.8 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 67/154 (43%), Gaps = 29/154 (18%)
Query: 43 TILLKHLQFSYQRPLLS-PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
IL+ + +PLL+ + ++I++ P R +
Sbjct: 9 AILVGLAAMFFSQPLLTLQDDGRPADVIIV-----------------PGGDGAPRAAQAA 51
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
+L+K + I++ GD ++ + ++ GV I +E ++ T+QNA
Sbjct: 52 QLWKDGRS-----PYILATGDGD------CLLNKHIMMAKGVPPSAILVECRAGSTWQNA 100
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+FS+ +++ + K+ ++V++ +H +R+ F+
Sbjct: 101 RFSAPLLRRLHAKSALIVTNWFHSRRAVASFRTA 134
>gi|167626293|ref|YP_001676793.1| hypothetical protein Fphi_0073 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167596294|gb|ABZ86292.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 357
Score = 81.4 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV LG ++ I + + +++ + + + II+SGG G
Sbjct: 189 AIVTLGYSLNDDGSMNNI-----------LVDRLKITLAAHKKYPNAIIIVSGG-VAHEG 236
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNA--QFSSSMIKNMQGKNIILVSSAYHL 185
+ ES L++ G+ I E QS +T NA + N KNI+L+SS H+
Sbjct: 237 VTESYQMKQWLIKHGISAQSIIQEDQSTNTVTNAINTINIIKKINRPVKNILLISSDSHI 296
Query: 186 KRSQLYFQH 194
+R+ F+
Sbjct: 297 RRANSIFEQ 305
>gi|322382281|ref|ZP_08056191.1| hypothetical protein PL1_3077 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321153783|gb|EFX46154.1| hypothetical protein PL1_3077 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 195
Score = 81.4 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGG-DPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ + + LYK + I+ SGG + E++V + G+ DI E +S
Sbjct: 41 RVPKAIELYKQGR----AGKILFSGGNQWEGQEDVEALVMKQGAINEGIPETDIITEIRS 96
Query: 155 LDTFQNAQFS----SSMIKNMQGKNIILVSSAYHLKR 187
T +N S + + K I++V++A+H++R
Sbjct: 97 TSTRENVLSSLLELDRAMGLHRLKRILIVTTAFHMRR 133
>gi|323496573|ref|ZP_08101626.1| hypothetical protein VISI1226_13176 [Vibrio sinaloensis DSM 21326]
gi|323318319|gb|EGA71277.1| hypothetical protein VISI1226_13176 [Vibrio sinaloensis DSM 21326]
Length = 208
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 60/170 (35%), Gaps = 34/170 (20%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY 104
L +HL+ + L+ + K I +LG+ + LY
Sbjct: 3 LYQHLEHLWSYMQLNHELKASEC-IFVLGSNDLRVAE-----------------YAATLY 44
Query: 105 KSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
+ I+ SGG + +E+ + + GV DI +E ++ +T +N
Sbjct: 45 HQGWAN----KILFSGGFGRLTAGNFDRSEAETFAQVARDLGVPAQDILIEDKATNTGEN 100
Query: 161 AQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
QFS+ ++K + ILV Y +R+ F + Y
Sbjct: 101 VQFSAELLKQHNLCFSSFILVQKPYMERRTLATFTKQ------WPTSYQQ 144
>gi|153803842|ref|ZP_01958428.1| integral membrane protein [Vibrio cholerae MZO-3]
gi|124120623|gb|EAY39366.1| integral membrane protein [Vibrio cholerae MZO-3]
Length = 94
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKE 229
++LV+SA H+KR+ F+ G+ + ++YL + IP S TE E
Sbjct: 1 MVLVTSASHMKRAMREFESAGLTPIPAPTNYLGHLNIIQPWDKYIPRSRYLEQTEQYWHE 60
Query: 230 YIGILIAYYR 239
+G++ R
Sbjct: 61 TLGLMWQTLR 70
>gi|294671368|ref|ZP_06736218.1| hypothetical protein NEIELOOT_03076 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291306916|gb|EFE48159.1| hypothetical protein NEIELOOT_03076 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 202
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGG G E+ + + GV D I++E +S T++N FS+ ++ + + II
Sbjct: 1 MSGGT-DGDGSNEAEAMRDMAVSMGVPADKIRIEPRSESTYENIAFSAPLLHDA--EQII 57
Query: 178 LVSSAYHLKRSQLYFQH 194
+VS A+HL R++ +
Sbjct: 58 IVSDAFHLARAEWLAKR 74
>gi|317485960|ref|ZP_07944815.1| DUF218 domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316922733|gb|EFV43964.1| DUF218 domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 185
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/216 (18%), Positives = 79/216 (36%), Gaps = 47/216 (21%)
Query: 32 LFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+ IG I +L+ L + + L + ++IV+LG
Sbjct: 5 WYGAIGKLAIAALLIGAVLIWRAEAWLHVDVPLEHADVIVVLGG---------------- 48
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISG-GDPQKHGLAESIVYNNKLLESGVERDDIK 149
+S R+ LY + + ++G GD + +L +GV
Sbjct: 49 -ESGQRVIGAAELYHQ----GVAPKVFVTGSGDGG--------LIVRRLGMAGVPDAA-- 93
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH------FGINTKASC 203
E+QS T++NA + ++ ++++LV+S +H +R+ F+ FG++ +
Sbjct: 94 CESQSRSTYENAVLTKKALEASHPRSVMLVTSWFHSRRALAVFRDVWPEVTFGVHPVYAG 153
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + Y EY+ L R
Sbjct: 154 ATFTARFR--------IYEMGYIFSEYVKTLWYMVR 181
>gi|319440596|ref|ZP_07989752.1| putative secreted protein [Corynebacterium variabile DSM 44702]
Length = 218
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 72/221 (32%), Gaps = 19/221 (8%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+++ LL+ +G I+ +++ + + + + + I++LG
Sbjct: 4 WKNLGSAVGAGIRGLLYMIVG-TIVVALVITLVTAGHVWAYARQDDRSEADTILVLGA-- 60
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PS +R+ LY + I+ GG E+
Sbjct: 61 ------AQYNGTPSNWFAARLDHAADLYND----GVAPRIVTVGGKLDGDVYTEAEAGER 110
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L + GV DI DT ++A+ ++++V+ H R+ + G
Sbjct: 111 YLEDKGVPASDISTIVHGSDTLESAELFGDEADKEGWGSVVVVTDPAHSLRATDMVRDQG 170
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
++ AS + A + L E G+L
Sbjct: 171 VSAHASPTRTGPAVSGRQAQLGSI------LHETGGLLYYR 205
>gi|256826645|ref|YP_003150604.1| hypothetical protein Ccur_01910 [Cryptobacterium curtum DSM 15641]
gi|256582788|gb|ACU93922.1| uncharacterized membrane protein [Cryptobacterium curtum DSM 15641]
Length = 229
Score = 81.1 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+K + I++LG +++P +PS R+ + LY+ + I++SG D
Sbjct: 52 RKTYDCILVLGA--SMLPN-----GQPSTVLKDRLDVAVNLYR----KGVAPKIVMSGDD 100
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ E +E G+ +DI + ++T+ + + + +++++V+
Sbjct: 101 SRALSYDEVTNMKKYAVEQGIPSEDIFCDHAGINTYDSMYRARYV---FNVESMVVVTQT 157
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
YH R+ FGI+ + SD LN+Y +
Sbjct: 158 YHQYRALFDASSFGIDCVGAPSD-LNSYEKKL 188
>gi|89054691|ref|YP_510142.1| hypothetical protein Jann_2200 [Jannaschia sp. CCS1]
gi|88864240|gb|ABD55117.1| protein of unknown function DUF218 [Jannaschia sp. CCS1]
Length = 252
Score = 81.1 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 67/171 (39%), Gaps = 12/171 (7%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I + F+ G IL L P + + I+ LG G + PT
Sbjct: 27 IRGLGRFVGRVILAGIAAYALIL-SGLAVYIAAAPGEPPVPEAHDAIICLGAGLS--PTQ 83
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
P+ S +R LY + ++ ++++G + ++ + L++ G
Sbjct: 84 GPDHAGPA--SRARAVTCAGLYGA----AVAPLVVVTGEGIADYPVSTA--MARVLMDHG 135
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
V I E + T QNA FS ++ + ++LV+ +HL R+ F+
Sbjct: 136 VPEHAIVNEPAAGSTIQNAAFSVPLL-PTETTRVVLVTQRFHLPRAIATFR 185
>gi|54302701|ref|YP_132694.1| hypothetical protein PBPRB1022 [Photobacterium profundum SS9]
gi|46916125|emb|CAG22894.1| hypothetical protein PBPRB1022 [Photobacterium profundum SS9]
Length = 358
Score = 81.1 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ + + L S II++GG + G ES L+E G+ D I E ++ +
Sbjct: 200 LLKRLTLTLSLANKYPKALIIVTGGLAKA-GRTESSAMKAWLVEQGISEDRIIEENKATN 258
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
T NA+ S +++ + LVS++ H+ RS + F
Sbjct: 259 TIDNARLSLALLAKYNIQTATLVSASIHVHRSHILF 294
>gi|111221457|ref|YP_712251.1| hypothetical protein FRAAL2020 [Frankia alni ACN14a]
gi|111148989|emb|CAJ60669.1| hypothetical protein FRAAL2020 [Frankia alni ACN14a]
Length = 228
Score = 81.1 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 58/178 (32%), Gaps = 18/178 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG PS +R+ + LY+ + +I G
Sbjct: 55 DHRPTSDTLVVLGA--------SQYDGRPSAVFAARLDHALELYRQGVAPN----VITIG 102
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ L GV D + + + DT + + ++ ++ +LV+
Sbjct: 103 GKQPGDRYTEAEAGAAYLRRRGVPADRVIVVPEGSDTLGSLTAVAGVMNTRHWRSTVLVT 162
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H RS+ + G++ S A + ++E IG
Sbjct: 163 DPPHSLRSRTMARDLGLDATTSPVTRGPAVHGFDTKVRYI------IREGIGYRWYQL 214
>gi|170703279|ref|ZP_02894076.1| protein of unknown function DUF218 [Burkholderia ambifaria
IOP40-10]
gi|170131818|gb|EDT00349.1| protein of unknown function DUF218 [Burkholderia ambifaria
IOP40-10]
Length = 219
Score = 81.1 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 80/222 (36%), Gaps = 28/222 (12%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
Q ++ +L SF I+ ++L + ++ V+ GN
Sbjct: 3 QRFKRGSVARIGRVLASFACLWIVAAVVLVGAGMRMP--------SEPADVAVIFGNALD 54
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
P +R+ +R Y+ + C + G GL E+ +
Sbjct: 55 DH-------GAPKPVLAARLDVGVRCYREGQ-----CPAFLVSGAIDGPGLNEATAMRDY 102
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ GV D I ++ Q +T AQ + + + + ++++S YHL R++L F+ GI
Sbjct: 103 LVAHGVPADRIAVDDQGDNTLATAQHTRAYLLAHRMSRVLIISQYYHLARARLAFERVGI 162
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ ++ AY P + +E + R
Sbjct: 163 ----AGANISAAY----PHHFQLRDIYSSWREVPAYAVYVLR 196
>gi|89076218|ref|ZP_01162571.1| hypothetical protein SKA34_04145 [Photobacterium sp. SKA34]
gi|89048104|gb|EAR53690.1| hypothetical protein SKA34_04145 [Photobacterium sp. SKA34]
Length = 226
Score = 80.7 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 27/160 (16%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ I +LG+ + + LYK + II SGG +
Sbjct: 26 DYIFVLGSNDERVAE-----------------RAVELYKQ----GLAPYIIFSGGVGELT 64
Query: 127 ----GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVS 180
+E+ + L+ GV + I +E +S +T +N F+ +++ ++ ILV
Sbjct: 65 EGLFNTSEAEHFAKIALDMGVPKGAILIEPESTNTGENVLFTRRLLQQKGLTPRSFILVQ 124
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF 220
+ +R+ F+ + +A + + + +F
Sbjct: 125 KPFMERRTLATFEQQWPHMQAIVTSPQINFDDYANDAISF 164
>gi|115359113|ref|YP_776251.1| hypothetical protein Bamb_4365 [Burkholderia ambifaria AMMD]
gi|115284401|gb|ABI89917.1| protein of unknown function DUF218 [Burkholderia ambifaria AMMD]
Length = 210
Score = 80.7 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 20/167 (11%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+L +F I+ ++L + ++ V+ GN R P
Sbjct: 7 VLAAFACLWIVAAVVLVGAGMRMP--------SEPADVAVIFGNALDD-------RGAPK 51
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
+R+ +R Y+ + C + G GL E+ + L+ GV + I +
Sbjct: 52 PVLAARLDVGVRCYREGQ-----CPAFLVSGAIDGPGLNEATAMRDYLVARGVPAERIAV 106
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+ Q +T AQ + + ++ + ++++S YHL R++L F+ GI
Sbjct: 107 DDQGDNTLATAQHTRAYLQAHRLSRVLIISQYYHLARARLAFERVGI 153
>gi|229824294|ref|ZP_04450363.1| hypothetical protein GCWU000282_01599 [Catonella morbi ATCC 51271]
gi|229786267|gb|EEP22381.1| hypothetical protein GCWU000282_01599 [Catonella morbi ATCC 51271]
Length = 229
Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 59/158 (37%), Gaps = 15/158 (9%)
Query: 47 KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKS 106
Q + + + W D I++LG G PS R+ + L ++
Sbjct: 31 AQFQTKTPQQIQATDWASDQVPILVLGAGIIDNKE-------PSKVLAGRLNSALTLAQT 83
Query: 107 CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSS 166
+ +I+SG D E V + L++ GV + I L+ T+ +
Sbjct: 84 FPNKA----LIMSG-DHTNQYYNEVAVMKDYLVQHGVASERIYLDHAGYSTYDSLYRLKH 138
Query: 167 MIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
++ +I+V+ YHL R+ + + G+ +
Sbjct: 139 VLGQN---RVIIVTQGYHLSRALMLARGLGLQAVGLAA 173
>gi|325953651|ref|YP_004237311.1| hypothetical protein Weevi_0004 [Weeksella virosa DSM 16922]
gi|323436269|gb|ADX66733.1| protein of unknown function DUF218 [Weeksella virosa DSM 16922]
Length = 225
Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 87/217 (40%), Gaps = 26/217 (11%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN---IIV 70
+L + K F+ + +F +G + +L + +P +S Q + G+ + V
Sbjct: 11 KILSNTYLKTVFILSVVGMFFLVG--------INYLIVLFAKPYVSSQVNELGDDVRVAV 62
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG T EPS R+ ++L+KS K +++SG + ++ L+E
Sbjct: 63 VLG-------TRFNKNGEPSDLLKDRLDAGIQLFKSNKVDY----LLLSG-ESLRNKLSE 110
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
V +E GV + I ++ +LDT+ + + KN I V+ YHL R+
Sbjct: 111 VDVMEKYCVERGVPVEKILVDGAALDTYSTVYRTKYI---YGIKNPIFVTQEYHLSRTLF 167
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+ +D+ + A+
Sbjct: 168 IGRMLNISCTGYPADFHTYTDLYKDRARELVSNVKAI 204
>gi|171317689|ref|ZP_02906873.1| protein of unknown function DUF218 [Burkholderia ambifaria MEX-5]
gi|171097164|gb|EDT42015.1| protein of unknown function DUF218 [Burkholderia ambifaria MEX-5]
Length = 219
Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 69/181 (38%), Gaps = 20/181 (11%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
Q ++ +L +F I+ ++L + ++ V+ GN
Sbjct: 2 KQRFKRGSVARIGRVLAAFACLWIVAAVVLVGAGMRMP--------SEPADVAVIFGNAL 53
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
P +R+ +R Y+ + C + G GL E+ +
Sbjct: 54 DDH-------GAPKPVLAARLDVGVRCYRDGQ-----CPAFLVSGAIDGPGLNEATAMRD 101
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+ GV I ++ Q +T AQ + + ++ + ++++S YHL R++L F+ G
Sbjct: 102 YLVAHGVPAGRIAVDDQGDNTLATAQHARAYLQAHRMSRVLIISQYYHLARARLAFERVG 161
Query: 197 I 197
I
Sbjct: 162 I 162
>gi|158313956|ref|YP_001506464.1| hypothetical protein Franean1_2122 [Frankia sp. EAN1pec]
gi|158109361|gb|ABW11558.1| protein of unknown function DUF218 [Frankia sp. EAN1pec]
Length = 228
Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 72/220 (32%), Gaps = 28/220 (12%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W + ++ + + + + ++ + +++L
Sbjct: 17 WFRVPWWRWAARIVAIIVGIVLLGSVMTFGQVWW----------VGRGDDRRASDALIVL 66
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G PS +R+ + LY+ + +I GG+ E+
Sbjct: 67 GA--------SQYDGRPSAILAARLDHALELYR----SGVAPRVITVGGNQPGDRFTEAE 114
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ L + GV + + Q +DT + + ++ + Q ++ ++V+ +H RS+
Sbjct: 115 AAGSYLRDRGVPSSAVLVVPQGVDTLSSLTAVAGLMDSRQWRSAVVVTDRWHSLRSRAIA 174
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
G++ S + A L+E IG
Sbjct: 175 DDLGVDAVTSPATSGPANRGFGTQMRYI------LREGIG 208
>gi|288916964|ref|ZP_06411336.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
gi|288351673|gb|EFC85878.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
Length = 202
Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 61/172 (35%), Gaps = 18/172 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ + +++LG PS +R+ + LY++ + +I G
Sbjct: 29 DDRRASDTLIVLGA--------SQYDGRPSAILAARLDHALELYRA----GVAPRVITVG 76
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G+ E+ V L + GV + Q DT + + ++ + + ++V+
Sbjct: 77 GNQPGDRFTEAEVAATYLRDHGVPASAVLAVPQGRDTLSSMIAVAGLMDSRHWGSAVVVT 136
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+H RS+ GI AS S A L+E IG
Sbjct: 137 DRWHSLRSRTIAADLGIAAVASPSTSGPANRGFGTQVHYI------LREGIG 182
>gi|313126704|ref|YP_004036974.1| hypothetical protein Hbor_19630 [Halogeometricum borinquense DSM
11551]
gi|312293069|gb|ADQ67529.1| uncharacterized conserved protein [Halogeometricum borinquense DSM
11551]
Length = 188
Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 16/136 (11%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH- 126
I+V+LG + + R+ +R+ +R + + S + SGG +H
Sbjct: 2 IVVVLG--HRLESSQIHERLR------ARVNAGIRAFNATDASS----LFFSGGQTNQHI 49
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYH 184
E V + GV+ D I L+ + DT NA F+ + N+ + LV+ +H
Sbjct: 50 DRTECGVMGEYAVRQGVDPDRIVLDPFAHDTIGNAYFTRVLCDNLGLDIDELSLVTDDFH 109
Query: 185 LKRSQLYFQH-FGINT 199
R++ F FG +
Sbjct: 110 APRAKYAFDQCFGADV 125
>gi|90577673|ref|ZP_01233484.1| hypothetical protein VAS14_11519 [Vibrio angustum S14]
gi|90440759|gb|EAS65939.1| hypothetical protein VAS14_11519 [Vibrio angustum S14]
Length = 221
Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 61/160 (38%), Gaps = 27/160 (16%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ I +LG+ + + LYK + II SGG +
Sbjct: 26 DCIFVLGSNDERVAE-----------------RAVELYK----KGVAPYIIFSGGVGELT 64
Query: 127 ----GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVS 180
+E+ + L+ GV ++ I +E +S +T +N F+ +++ ++ ILV
Sbjct: 65 EGLFNTSEAEHFAKIALDMGVPKEAILIEPESTNTGENVVFTRRLLQQKGLTPRSFILVQ 124
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF 220
+ +R+ F+ N +A + + + +F
Sbjct: 125 KPFMERRTLATFEQQWPNMQAIVTSPAIRFDDYANDTISF 164
>gi|23100336|ref|NP_693803.1| hypothetical protein OB2881 [Oceanobacillus iheyensis HTE831]
gi|22778568|dbj|BAC14837.1| hypothetical protein [Oceanobacillus iheyensis HTE831]
Length = 436
Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
+ P P+ D ++ V+LG ++ + + + + + + +
Sbjct: 87 ENLNVAPDGLPED--DSHVFVVLG-----------FALDSNGEMRDELIGRLEVALNSAE 133
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ ++++GG +K+G E ++ L++ G+ D I +E +S +T +NA S ++
Sbjct: 134 KYPNAYVLVTGG-VEKNGWTEGDRMHDWLVDHGLSEDRIIVENESSNTVENASNSFEILY 192
Query: 170 NM--QGKNIILVSSAYHLKRSQLYF 192
N + +++S YHLKRS +++
Sbjct: 193 NQYEDIDSFSMITSQYHLKRSSIFY 217
>gi|51891778|ref|YP_074469.1| hypothetical protein STH640 [Symbiobacterium thermophilum IAM
14863]
gi|51855467|dbj|BAD39625.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 187
Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
PT + + + R LYK+ + + I+GGD + G+ E+ +
Sbjct: 21 EDEPTPGDLILVFGGKRLERAERAAELYKA----GLAPKVFITGGDKRGIGVCEAERLRD 76
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN----MQGKNIILVSSAYHLKR 187
++E V + I +E + L+T + Q+S I+ KN++LVS+ +H++R
Sbjct: 77 HMVELSVPAEAIDIECEGLNTIEQVQYSVKRIEETIGWKNIKNVLLVSAPHHMRR 131
>gi|296132533|ref|YP_003639780.1| protein of unknown function DUF218 [Thermincola sp. JR]
gi|296031111|gb|ADG81879.1| protein of unknown function DUF218 [Thermincola potens JR]
Length = 239
Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 56/150 (37%), Gaps = 15/150 (10%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
S + + ++LG + S R+ + LYK+ K I++
Sbjct: 56 SAEDMPPATVAIVLGAKVYPNGGV-------STVLADRLNTGVELYKAGKVK----KILL 104
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
+G D + E +L G+ +DI ++ T+ + + + + K+ ++
Sbjct: 105 TG-DHGQTNYDEVNTMREFMLRKGIPAEDIFMDHAGFSTYDSMYRARDVFR---VKDAVV 160
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
V+ +HL R+ + GI +D
Sbjct: 161 VTQQFHLPRALYIARTMGIEATGLIADKRT 190
>gi|206564007|ref|YP_002234770.1| hypothetical protein BCAM2170 [Burkholderia cenocepacia J2315]
gi|198040047|emb|CAR56028.1| putative exported protein [Burkholderia cenocepacia J2315]
Length = 219
Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 67/168 (39%), Gaps = 13/168 (7%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQS--------YSRIFETMRLYKSCKQHSMHCTIIISG 120
IV+ G P A+ + +R+ +R Y++ + C +
Sbjct: 31 IVVHGMRMPSDPADVAVIFGNALDETGAPKPVLAARLDVGVRCYRAGQ-----CPAFLVS 85
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G GL E+ + L+ GV D I ++ Q +T AQ + + ++ + +++VS
Sbjct: 86 GAIDGPGLNEATAMRDYLVARGVPADRIAVDDQGDNTLATAQHTLAYLRTHRLSRVLIVS 145
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
YHL R++L F+ GI + Y + S+ + A+
Sbjct: 146 QYYHLARARLAFERVGIARSTISAAYPRRFQWRDVYSSWREVPAYAVY 193
>gi|225574945|ref|ZP_03783555.1| hypothetical protein RUMHYD_03024 [Blautia hydrogenotrophica DSM
10507]
gi|225037792|gb|EEG48038.1| hypothetical protein RUMHYD_03024 [Blautia hydrogenotrophica DSM
10507]
Length = 161
Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 75/179 (41%), Gaps = 23/179 (12%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++ + +++LG A+R R+ + + + ++SGG
Sbjct: 5 PENLDYLIVLGAHVNGTRLSRALRF--------RVEKAEEYLRENPRTLA----VLSGGR 52
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
++E+ + LL G+ER+ + LE +S+ T +N +FS ++ + + + I +V++
Sbjct: 53 GVDEKISEAKAMADYLLAHGIERERLLLEERSVSTAENLRFSLELLPDRK-QKIGIVTNN 111
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+H+ RS + G + + + P + + +E + I+ GN
Sbjct: 112 FHIFRSVAIGRKLG-------CEKIWGLAAPYPSWKLLWYS---FREVLAIVKDKIVGN 160
>gi|226355402|ref|YP_002785142.1| hypothetical protein Deide_05490 [Deinococcus deserti VCD115]
gi|226317392|gb|ACO45388.1| Conserved hypothetical protein [Deinococcus deserti VCD115]
Length = 256
Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/240 (16%), Positives = 88/240 (36%), Gaps = 16/240 (6%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW 62
L + +I R++ C +L G++ LL + + + L
Sbjct: 27 LVLLLIIAGAVAAWFPLTRRVMQAGCVVLA------GVLAVCLLTPVLRAPLQALTLAGS 80
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++IV+LG G + S +R+ + L+++ +M + SG
Sbjct: 81 PVPADVIVVLGGGVQC------GTRAQAPSSAARLVRGLELWRAGYAPAMTVS-EPSGLI 133
Query: 123 PQKHGLAESIVYNNKLLESGVERD--DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
S++ ++ R ++ ++ T A + ++ + ++LV+
Sbjct: 134 GPADCPRLSVLQRGQITSLY-PRGGPEVLTLSRVTTTRDEAARVRQLAQSRGWEQVLLVT 192
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
S H +R+ FQ +G++ + +D ++ S Y + L E + + A G
Sbjct: 193 SPSHSRRAARLFQAYGLSVVSVPADETLFDTTLPLPSDRLYAVRVLLYEGLSRVKASLGG 252
>gi|170737710|ref|YP_001778970.1| hypothetical protein Bcenmc03_5353 [Burkholderia cenocepacia MC0-3]
gi|169819898|gb|ACA94480.1| protein of unknown function DUF218 [Burkholderia cenocepacia MC0-3]
Length = 230
Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 62/156 (39%), Gaps = 14/156 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
++ V+ GN P +R+ +R Y++ + C + G
Sbjct: 53 PADVAVIFGNALDDT-------GAPKPVLAARLDVGVRCYRAGQ-----CPAFLVSGAID 100
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
GL E+ + L+ GV D I ++ Q +T AQ + + + + +++VS YH
Sbjct: 101 GPGLNEATAMRDYLVARGVPADRIAVDDQGDNTLATAQHTLAYLHAHRLSRVLIVSQYYH 160
Query: 185 LKRSQLYFQHFGI--NTKASCSDYLNAYYSIIPLSA 218
L R++L F+ GI + ++ + +
Sbjct: 161 LARARLAFERVGIARSNISAAYPRRFQWRDVYSSWR 196
>gi|320161035|ref|YP_004174259.1| hypothetical protein ANT_16330 [Anaerolinea thermophila UNI-1]
gi|319994888|dbj|BAJ63659.1| hypothetical protein ANT_16330 [Anaerolinea thermophila UNI-1]
Length = 202
Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 75/224 (33%), Gaps = 38/224 (16%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K + +LL I I LL + L+ + + IV+L G
Sbjct: 4 KSLWSILAILLGIVISCLCITPFLLGSIGSL----LVISTPLQPADAIVVLSGGRD---- 55
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT----IIISGGDPQKHGLAESIVYNNK 137
R+ + + L K + + T I SG + +E+
Sbjct: 56 ------------LQRLEKAVNLMKEGQAGYLILTKTEDITESGRQTADYLASEAH----- 98
Query: 138 LLESGVERDDIKLETQ-SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF---- 192
+ G+ I + + S +T Q A + +++ K +I+V+ YH RS++ F
Sbjct: 99 --QRGIPVPKIVITQKTSKNTEQEAIATLEILRERGWKTLIVVTDPYHTLRSRIIFREVM 156
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ I S + + + N +E + +L
Sbjct: 157 RKDSIKVYTVPSKKPDVPSWLWYIDGN--SRRAVWREILSLLAY 198
>gi|289642675|ref|ZP_06474815.1| protein of unknown function DUF218 [Frankia symbiont of Datisca
glomerata]
gi|289507505|gb|EFD28464.1| protein of unknown function DUF218 [Frankia symbiont of Datisca
glomerata]
Length = 205
Score = 79.5 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 67/175 (38%), Gaps = 12/175 (6%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
M L + ++ +++ + ++ +++++LG P
Sbjct: 1 MWLLRVVAILVLAGVMISVFAMIQIWVVGRSDDQRRSDVLIVLGA--------SQFNGRP 52
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S +R+ + LY++ + I+ GG E+ N L+ GV +
Sbjct: 53 SAVFAARLDHALALYRA----GVAPRIVTVGGSQVGDVYTEARAAANYLVSRGVPASAVV 108
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ + DT + + + ++ + ++ ++V+ +H RS+ + I+ S +
Sbjct: 109 VVGEGRDTLGSLRAVARIMAVNRWRSAVVVTDPWHSLRSRTIARDLDIDAVTSPA 163
>gi|226360352|ref|YP_002778130.1| hypothetical protein ROP_09380 [Rhodococcus opacus B4]
gi|226238837|dbj|BAH49185.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 230
Score = 79.5 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 61/173 (35%), Gaps = 18/173 (10%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ IV+LG PS +R+ + +LY + + +I GG +
Sbjct: 63 ADAIVVLGA--------AQYSGTPSSVFEARLEQAYKLY----ERGVAPEVITVGGKQEG 110
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
E+ N L+ GV D I + DT + + S + + +LVS +H
Sbjct: 111 DEYTEAASGKNYLISRGVPADSITAVEEGSDTLLSIEAVSEAMGAQGIDSAVLVSDPWHS 170
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
R++ + G++ + + A ++ +E ++
Sbjct: 171 LRTRTMARDAGLDAWTAPTRQGPAVFTRESQLHGIA------RETGALIWYQL 217
>gi|302528814|ref|ZP_07281156.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302437709|gb|EFL09525.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length = 218
Score = 79.5 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 24/187 (12%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+R+I F L+ G + + + IV+LG
Sbjct: 15 WVRRIVFGVVLALVAVIGGTAF------------RVWQVARENDRTPADAIVVLGA---- 58
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+PS +R+ + +LY + T+I +GG + E+ L
Sbjct: 59 ----AQYNGKPSEIFTARLEKARQLY----TEGVAKTVITAGGKKSRDNFTEATAGARWL 110
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ GV + DT ++ + + +K ++++LVS +H RS+ + G+
Sbjct: 111 TKHGVPASATLPVGEGNDTLRSLRAVADQVKARGWRSVVLVSDPWHSYRSRTMSEDLGLE 170
Query: 199 TKASCSD 205
A+ +
Sbjct: 171 AWAAPTH 177
>gi|107025790|ref|YP_623301.1| hypothetical protein Bcen_3433 [Burkholderia cenocepacia AU 1054]
gi|116693029|ref|YP_838562.1| hypothetical protein Bcen2424_4935 [Burkholderia cenocepacia
HI2424]
gi|105895164|gb|ABF78328.1| protein of unknown function DUF218 [Burkholderia cenocepacia AU
1054]
gi|116651029|gb|ABK11669.1| protein of unknown function DUF218 [Burkholderia cenocepacia
HI2424]
Length = 230
Score = 79.5 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 62/156 (39%), Gaps = 14/156 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
++ V+ GN P +R+ +R Y++ + C + G
Sbjct: 53 PADVAVIFGNALDDT-------GAPKPVLAARLDVGVRCYRAGQ-----CPAFLVSGAID 100
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
GL E+ + L+ GV D I ++ Q +T AQ + + + + +++VS YH
Sbjct: 101 GPGLNEATAMRDYLVARGVPADRIAVDDQGDNTLATAQHTLAYLHAHRLSRVLIVSQYYH 160
Query: 185 LKRSQLYFQHFGI--NTKASCSDYLNAYYSIIPLSA 218
L R++L F+ GI + ++ + +
Sbjct: 161 LARARLAFERVGIARSNISAAYPRRFQWRDVYSSWR 196
>gi|313884387|ref|ZP_07818148.1| conserved hypothetical protein [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620171|gb|EFR31599.1| conserved hypothetical protein [Eremococcus coleocola
ACS-139-V-Col8]
Length = 236
Score = 79.5 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 72/190 (37%), Gaps = 21/190 (11%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK----KDGNIIVLLGN 74
+I L+ +F+ I+ + + + + Y R ++ Q + D +V+LG
Sbjct: 6 KFIQILAKGSAYLILAFLALVIMINLAM--IAYGYSRTVVIDQLQSKGYGDQVPVVVLGA 63
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G PS R+ + ++++ I+SG D + E V
Sbjct: 64 GVINNEE-------PSQILKLRLDKAYQVFEEAPDR----KFIMSG-DHLQDNYNEVAVM 111
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
N L++ G+ + I L+ T+ N + + ++ I ++ YHL R+ +
Sbjct: 112 KNYLIDKGIPANQIYLDHVGTSTY-NTIY--RLKHVLKIDKAIFITQNYHLSRTLYIAKQ 168
Query: 195 FGINTKASCS 204
G+ +
Sbjct: 169 LGVQALGVAA 178
>gi|330448188|ref|ZP_08311836.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492379|dbj|GAA06333.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 221
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 95 SRIFE-TMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIK 149
R+ E + LYK + I+ SGG + +E+ + ++ GV + DI
Sbjct: 36 DRVAERAVELYKQ----GLAPYIVFSGGVGELTEGLYSTSEAEHFAKIAMDMGVPQQDIV 91
Query: 150 LETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
+E++S +T +N F+ +++ + ILV + +R+ F+ N A +
Sbjct: 92 IESESTNTGENVVFTRRLLEQEGLHPSSFILVQKPFMERRTLATFEQQWPNMPAIVTSPQ 151
Query: 208 NAYYSI 213
++
Sbjct: 152 LSFDDY 157
>gi|94984590|ref|YP_603954.1| hypothetical protein Dgeo_0483 [Deinococcus geothermalis DSM 11300]
gi|94554871|gb|ABF44785.1| protein of unknown function DUF218 [Deinococcus geothermalis DSM
11300]
Length = 259
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 61/182 (33%), Gaps = 18/182 (9%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-- 118
Q + I++LG G S +R+ + L+++ ++
Sbjct: 78 QPPVRADAIIVLGGGVQCGART------LESSSLTRLLRGLELWRAGY-----APVLTVS 126
Query: 119 --SG--GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
SG G P L+E + L + + T A + + +
Sbjct: 127 EQSGLLGPPNCVKLSELERAQVRALYPTGGPE-VLTLPNVTTTRDEAARVRDLARERGWR 185
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++LV+S H +R+ F G+N + + +++ + + L E + +
Sbjct: 186 RVLLVTSPSHSRRAARLFAAQGVNVVSVPAPETRFDTALLLPADRLSALRVLLYEGLARV 245
Query: 235 IA 236
A
Sbjct: 246 KA 247
>gi|90414649|ref|ZP_01222621.1| hypothetical protein P3TCK_09293 [Photobacterium profundum 3TCK]
gi|90324282|gb|EAS40854.1| hypothetical protein P3TCK_09293 [Photobacterium profundum 3TCK]
Length = 343
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ + + L S II++GG + G ES L+E GV +D + E ++ +
Sbjct: 185 LLKRLTLTLSLANKYPKALIIVTGGLAKA-GQTESSAMKTWLVEQGVNKDRVIEENKATN 243
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
T NA+ S +++ + LVS++ H+ RS + F
Sbjct: 244 TIDNARLSLALLNKYNIQAATLVSASIHVHRSHILF 279
>gi|323158291|gb|EFZ44368.1| hypothetical protein ECE128010_5377 [Escherichia coli E128010]
Length = 180
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 14/146 (9%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK--KDG 66
+ W Q KIF +S L + + LL+ ++ +Y P W +
Sbjct: 47 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTY------PTWNNSQKV 99
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G T P A S R+ E +RL++ + +I +GG + +
Sbjct: 100 DYIVVLGGGYTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTN 154
Query: 127 GLAESIVYNNKLLESGVERDDIKLET 152
++ + V GV R+ I
Sbjct: 155 TVSTAEVGARVAQSLGVPREQIITLD 180
>gi|207742563|ref|YP_002258955.1| hypothetical protein RSIPO_00752 [Ralstonia solanacearum IPO1609]
gi|206593956|emb|CAQ60883.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 190
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 30/178 (16%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++IV+LG +S R+ LY + + + +SG
Sbjct: 42 MPGHADVIVVLGG-----------------ESGQRVIGAAELYHA----GVAPRVFVSG- 79
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++ +L+ +GV + I E +S +T +NA+ + M+ ++ +LV+S
Sbjct: 80 ------EGDCLLIVRRLVMAGVPAERIGHECESGNTMENARMTRRMLDGQSVRSAVLVTS 133
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YH R+ F+ + + + + S Y + L EY+ R
Sbjct: 134 WYHTGRALRAFRR--VWPEVAWGARGVFPGDTLAKSFPIYESGSILAEYLKRAWYVVR 189
>gi|269219771|ref|ZP_06163625.1| protein SanA [Actinomyces sp. oral taxon 848 str. F0332]
gi|269211013|gb|EEZ77353.1| protein SanA [Actinomyces sp. oral taxon 848 str. F0332]
Length = 377
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/219 (16%), Positives = 71/219 (32%), Gaps = 29/219 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L + + K+ F G + + S P K + I++LG
Sbjct: 158 LVKRLAKVCIAIVVTGALVFTGLNV---YMTTSTDDSVVTVNSVPSEAK-ADCILILGAS 213
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+PS R+ + LY+ +++SG + E V
Sbjct: 214 VRAN-------RKPSPMLLKRLERGLELYR----KKAAPKVLVSGDNATV-AYNEVKVMR 261
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L GV DI + T+++ + + K K +I+V+ YHL R+
Sbjct: 262 EWLQAKGVPPQDIFEDHAGFSTYESMYRARDVFK---VKRMIVVTQRYHLARAIYTGDAL 318
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
G+ ++ N I ++E++ +
Sbjct: 319 GLKVWGVAANGNNYSGQIKRD----------MREWVARV 347
>gi|312140270|ref|YP_004007606.1| membrane protein [Rhodococcus equi 103S]
gi|311889609|emb|CBH48926.1| putative membrane protein [Rhodococcus equi 103S]
Length = 231
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 63/174 (36%), Gaps = 18/174 (10%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ IV+LG PS +R+ + +LY+ + TI+ GG +
Sbjct: 63 PADAIVVLGAAQYD--------GTPSSVFEARLDQAHKLYEQ----GVAATIVTVGGKQE 110
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E+ N L++ GV I + DT + + S + ++ +LVS +H
Sbjct: 111 GDEYTEAASGRNYLMDQGVPGGAIVAVEEGSDTLLSVEAVSREMGARGLRSAVLVSDPWH 170
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
R++ + G++ + + A + ++E +L
Sbjct: 171 SLRTRTMARDAGLDAWTAPTRQGPAVMTRESQLHGI------VRETGALLWYQL 218
>gi|225021791|ref|ZP_03710983.1| hypothetical protein CORMATOL_01819 [Corynebacterium matruchotii
ATCC 33806]
gi|224945487|gb|EEG26696.1| hypothetical protein CORMATOL_01819 [Corynebacterium matruchotii
ATCC 33806]
Length = 244
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 75/202 (37%), Gaps = 21/202 (10%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+ I I + L RP + + + I++LG PS Q
Sbjct: 6 TAIITSPILLAITSILVRGRIRPTNT---RHRFDTILVLG--------TTQYGGVPSRQF 54
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
+R+ L+ + I+ GG E+ V N LL++ V+ D + +
Sbjct: 55 AARLRWAAELWHMHGTQN----IVTVGGKLPGDTTTEAEVGRNYLLQAKVDPDCLIPVPE 110
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
DT + + + + I++V+ H R++L + G+N + S + Y A I
Sbjct: 111 GNDTLGSYHAALERLGDDYHGTILIVTDPNHALRAELLAKQIGMNARVSPTPYCPA---I 167
Query: 214 IPLSANFYLTELALKEYIGILI 235
P F+ E G+++
Sbjct: 168 FPTKGFFWTLS---HEVGGLIV 186
>gi|305680812|ref|ZP_07403619.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
gi|305659017|gb|EFM48517.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
Length = 244
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 75/202 (37%), Gaps = 21/202 (10%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+ I I + L RP + + + I++LG PS Q
Sbjct: 6 TAIITSPILLAITSILVRGRFRPTNT---RHRFDTILVLG--------TTQYGGVPSRQF 54
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
+R+ L+ + I+ GG E+ V N LL++ V+ D + +
Sbjct: 55 AARLRWAAELWHMHGTQN----IVTVGGKLPGDTTTEAEVGRNYLLQAKVDPDCLIPVPE 110
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
DT + + + + I++V+ H R++L + G+N + S + Y A I
Sbjct: 111 GNDTLGSYHAALERLGDDYHGTILIVTDPNHALRAELLAKQIGMNARVSPTPYCPA---I 167
Query: 214 IPLSANFYLTELALKEYIGILI 235
P F+ E G+++
Sbjct: 168 FPTKGFFWTLS---HEVGGLIV 186
>gi|94264714|ref|ZP_01288494.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93454823|gb|EAT05073.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 78
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA-----YYSIIPLSANFYLTELA 226
+ ++LV+SA H+ RS F+ GIN + +D+ ++P + + + + A
Sbjct: 3 GQRPVLLVTSAQHMPRSLATFRAVGINAVPAPADFEVIPQPLHPLRLLPDAHSLHQSTSA 62
Query: 227 LKEYIGILIAYYRG 240
LKEY+G+L+ RG
Sbjct: 63 LKEYLGLLVYRLRG 76
>gi|325676983|ref|ZP_08156654.1| hypothetical protein HMPREF0724_14437 [Rhodococcus equi ATCC 33707]
gi|325552145|gb|EGD21836.1| hypothetical protein HMPREF0724_14437 [Rhodococcus equi ATCC 33707]
Length = 231
Score = 79.1 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 62/174 (35%), Gaps = 18/174 (10%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ IV+LG PS +R+ + +LY+ + TI+ GG +
Sbjct: 63 PADAIVVLGAAQYD--------GTPSSVFEARLDQAHKLYEQ----GVAATIVTVGGKQE 110
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E+ N L++ GV I + DT + + S + + +LVS +H
Sbjct: 111 GDEYTEAASGRNYLMDQGVPGGAIVAVEEGSDTLLSVEAVSREMGARGLHSAVLVSDPWH 170
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
R++ + G++ + + A + ++E +L
Sbjct: 171 SLRTRTMARDAGLDAWTAPTRQGPAVMTRESQLHGI------VRETGALLWYQL 218
>gi|325291319|ref|YP_004267500.1| protein of unknown function DUF218 [Syntrophobotulus glycolicus DSM
8271]
gi|324966720|gb|ADY57499.1| protein of unknown function DUF218 [Syntrophobotulus glycolicus DSM
8271]
Length = 216
Score = 79.1 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 65/178 (36%), Gaps = 15/178 (8%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
LL I + +++ + S I++LG ++P
Sbjct: 2 ILFLLGITISLSTYIFAVNHYVEKQGAEYICSLDEIPQAEAILILGA--YVLPN-----G 54
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
S R+ LYK K II+SG D + E + L+ GV D
Sbjct: 55 TVSGMLEDRLAVGDELYKMGK----APKIIVSG-DHGQSDYDEVNSMKSFLVHKGVPAQD 109
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I ++ T+++ + + K + +I+V+ YHLKR+ + GI +D
Sbjct: 110 IFMDHAGFSTYESMYRARDIFK---VQRLIIVTQEYHLKRAVFDARGLGIEAGGVSAD 164
>gi|312196065|ref|YP_004016126.1| hypothetical protein FraEuI1c_2217 [Frankia sp. EuI1c]
gi|311227401|gb|ADP80256.1| protein of unknown function DUF218 [Frankia sp. EuI1c]
Length = 267
Score = 79.1 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 58/173 (33%), Gaps = 20/173 (11%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG PS +R+ LY++ + +I G
Sbjct: 94 DQRPRSDALVVLGA--------SQYNGRPSEVFQARLDHAAELYRA----GVAPLVITVG 141
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ V L + GV + + DT ++ + + + ++V+
Sbjct: 142 GKIPGDHYTEAGVGATYLEKQGVPTSAVLAVPEGRDTLESLIGVAGEMNTRGLRRAVIVT 201
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFY-LTELALKEYIG 232
+H RS + G+ +S + P + ++E IG
Sbjct: 202 DRWHSLRSVAMARDLGLTAHSSPT-------VTGPANRGLETQVRYIIREAIG 247
>gi|297559723|ref|YP_003678697.1| hypothetical protein Ndas_0746 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844171|gb|ADH66191.1| protein of unknown function DUF218 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 370
Score = 79.1 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 72/204 (35%), Gaps = 18/204 (8%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+ ++ + + +++ + + + IV+LG PS
Sbjct: 172 WLVSLLLVTALAVPVGTWAWVWYVARQDERTPSDAIVVLGA--------SQYNGVPSPVF 223
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
+R+ + LY + I+ GG E+ N L+E GV D + +
Sbjct: 224 EARLRQAQVLY----LEGVAPVIVTVGGKLPGDNFTEAASGRNWLIEVGVPGDQVIAVEE 279
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
DT Q+ + + + + ILVS +H RS+ GI S S + I
Sbjct: 280 GSDTLQSIEAVAGVFEANSWDTAILVSDPWHSLRSERMAAAHGIEAGTSPS--RSGPAVI 337
Query: 214 IPLSANFYLTELALKEYIGILIAY 237
+ +Y+T +E + +
Sbjct: 338 ERRTQLWYIT----RETAALWYYW 357
>gi|218670399|ref|ZP_03520070.1| hypothetical protein RetlG_01442 [Rhizobium etli GR56]
Length = 90
Score = 79.1 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN-----AYYSIIPLSA 218
+ + + +L++S +H+ RS F+ GI+ +DY +
Sbjct: 1 TKEFLAGQGLSHCLLITSGFHMPRSVGIFRKLGIDIVPWPTDYRTDGQVRPGLDFTQPNL 60
Query: 219 NFYLTELALKEYIGILIAYYRGN 241
N A++E+ G++ Y G
Sbjct: 61 NAQNMATAIREWYGLVGYYLAGR 83
>gi|111018227|ref|YP_701199.1| hypothetical protein RHA1_ro01217 [Rhodococcus jostii RHA1]
gi|110817757|gb|ABG93041.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 230
Score = 78.7 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 61/173 (35%), Gaps = 18/173 (10%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ IV+LG PS +R+ + +LY + + +I GG +
Sbjct: 63 ADAIVVLGA--------AQYSGTPSSVFEARLEQAYKLY----ERGVAPEVITVGGKQEG 110
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
E+ N L+ GV D I + DT + + S + + +LVS +H
Sbjct: 111 DEYTEAASGKNYLISRGVPADSITAVEEGSDTLLSIEAVSEAMAAQGIDSAVLVSDPWHS 170
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
R++ + G++ + + A ++ +E ++
Sbjct: 171 LRTRTMARDAGLDAWTAPTRQGPAVFTRESQLHGIA------RETGALIWYQL 217
>gi|34499583|ref|NP_903798.1| hypothetical protein CV_4128 [Chromobacterium violaceum ATCC 12472]
gi|34105434|gb|AAQ61789.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 190
Score = 78.7 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 30/192 (15%)
Query: 48 HLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSC 107
L + L++ + + IV+LG +S R+ LY
Sbjct: 24 PLIRYSKSWLVAETPQPRADWIVVLGG-----------------ESGERVIGAAELYHQG 66
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
+ + +SG + ++ +L +GV R I E S T+QNA +
Sbjct: 67 RAPF----VFVSG-------EGDCLLIVRRLQMAGVPRGKIGYECLSKSTWQNAVLTRQA 115
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ + Q + I LV+S +H +R+ F+ + ++ + + S +Y L
Sbjct: 116 LASRQPRRITLVTSWFHSRRALETFRQA--WPEVEWGMHIVYPGNDLYHSLAWYEAGAVL 173
Query: 228 KEYIGILIAYYR 239
EY+ IL+ R
Sbjct: 174 TEYLKILVYSVR 185
>gi|160940880|ref|ZP_02088220.1| hypothetical protein CLOBOL_05772 [Clostridium bolteae ATCC
BAA-613]
gi|158436124|gb|EDP13891.1| hypothetical protein CLOBOL_05772 [Clostridium bolteae ATCC
BAA-613]
Length = 275
Score = 78.7 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/222 (14%), Positives = 82/222 (36%), Gaps = 45/222 (20%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTI-LLKHLQFSYQRPLLSPQWK 63
+FL+ W+ R ++ ++ G ++ + +L L + K
Sbjct: 41 LVFLVYGKWYYARNMERIPRWVPVSVVTTCIAGVAVLGILCILVFLGAATPG-------K 93
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ + +++LG S R+ + + + + +++SGG
Sbjct: 94 ANLDYVIVLGA--------RVKEHTVSNSLKKRLDRAI----VYAEENPYTILVLSGGKG 141
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN-------- 175
+E+ V + L+ +GV + +E+ S T +N +S +I+ + K+
Sbjct: 142 PGEADSEAQVMYDYLVYNGVSPRQLLMESDSTSTVENIAYSKIVIEQDRMKDKKEIIPMP 201
Query: 176 -----------------IILVSSAYHLKRSQLYFQHFGINTK 200
I +++S +H+ R++L + +G +
Sbjct: 202 GKTGSVPYAIAPDKPLEIGVLTSNFHIYRARLTAEKWGFDNV 243
>gi|207723593|ref|YP_002253992.1| hypothetical protein RSMK00882 [Ralstonia solanacearum MolK2]
gi|206588795|emb|CAQ35758.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 190
Score = 78.7 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 30/178 (16%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++IV+LG +S R+ LY + + + +SG
Sbjct: 42 MPGHADVIVVLGG-----------------ESGQRVIGAAELYHA----GVAPRVFVSG- 79
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++ +L+ +GV + I E +S +T +NA+ + M+ ++ +LV+S
Sbjct: 80 ------EGDCLLIVRRLVMAGVPAERIGHECESGNTMENARMTRRMLDGQSVRSAVLVTS 133
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YH R+ F+ + + + + S Y + L EY+ R
Sbjct: 134 WYHTGRALRAFRR--VWPEVAWGARGVFPGDTLAKSFPIYESGSILAEYLKRAWYAVR 189
>gi|254250125|ref|ZP_04943445.1| hypothetical protein BCPG_05008 [Burkholderia cenocepacia PC184]
gi|124876626|gb|EAY66616.1| hypothetical protein BCPG_05008 [Burkholderia cenocepacia PC184]
Length = 204
Score = 78.7 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 14/156 (8%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
++ V+ GN P +R+ +R Y + + C + G
Sbjct: 27 PADVAVIFGNALDDT-------GAPKPVLAARLDVGVRCYHAGQ-----CPAFLVSGAID 74
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
GL E+ + L+ GV D I ++ Q +T AQ + + + + +++VS YH
Sbjct: 75 GPGLNEATAMRDYLVARGVPADRIAVDDQGDNTLATAQHTLAYLHAHRLSRVLIVSQYYH 134
Query: 185 LKRSQLYFQHFGI--NTKASCSDYLNAYYSIIPLSA 218
L R++L F+ GI + ++ + +
Sbjct: 135 LARARLAFERVGIARSNISAAYPRRFQWRDVYSSWR 170
>gi|325519750|gb|EGC99059.1| hypothetical protein B1M_38501 [Burkholderia sp. TJI49]
Length = 210
Score = 78.7 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 13/151 (8%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P +R+ +R Y + + T+++SG GL E+ + L+ GV + I
Sbjct: 50 PKPVLAARLDVGVRCYHAGR----CPTLLVSG-AIDGPGLNEAAAMRDYLVARGVPAERI 104
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
++ +T AQ + + ++ + ++++VS +YHL R++L F+ GI + +D
Sbjct: 105 VVDELGDNTLATAQHTLAYMRAQRLSSVLIVSQSYHLARARLAFERVGI----ARADLRA 160
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIAYYR 239
AY + Y + +E + R
Sbjct: 161 AYPRGF-QWRDLYSS---WREVPAYAVYAVR 187
>gi|291286558|ref|YP_003503374.1| hypothetical protein Dacet_0629 [Denitrovibrio acetiphilus DSM
12809]
gi|290883718|gb|ADD67418.1| protein of unknown function DUF218 [Denitrovibrio acetiphilus DSM
12809]
Length = 190
Score = 78.7 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 61/148 (41%), Gaps = 18/148 (12%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I++L + + ++ R+ + + K M I G D +
Sbjct: 5 AIIVL-------ANLMDREGFLNEETSRRMDLAIEEFNKDKAPWM----ITCGWDYRDDS 53
Query: 128 -LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS-SMIKNMQGKNIILVSSAYHL 185
+ + E + D I +E S DT +A F+ +++KN + K I++V+S YH+
Sbjct: 54 SIKIADAMKKYAKEKNIPVDRIIVELNSRDTVGDAIFTKNNIVKNKEWKKILVVTSDYHV 113
Query: 186 KRSQLYFQ-----HFGINTKASCSDYLN 208
R++ F+ + I+ S ++ N
Sbjct: 114 DRTRKIFEFVYGDQYHIDVIGSETEQKN 141
>gi|297538308|ref|YP_003674077.1| hypothetical protein M301_1116 [Methylotenera sp. 301]
gi|297257655|gb|ADI29500.1| protein of unknown function DUF218 [Methylotenera sp. 301]
Length = 227
Score = 78.7 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 88/214 (41%), Gaps = 29/214 (13%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
F+ G + TIL+ SY + L++ + + ++LG + +P+
Sbjct: 35 FALAGTLVYLTILITI--GSYAKQLINNPPSQQADAALILG-------NRAYLHGKPNPC 85
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
R+ E + L + + T+++SGG + E++ G + + I LE+
Sbjct: 86 LTGRVDEGLLLAQQ----GLVSTLLMSGGLDYEDERIEAVTMEAHARSKGFQGE-ILLES 140
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR------SQLYFQHFGINTKASCSDY 206
+S T +N FS +++ KNII+ S YH+ R + + ++ A+ S
Sbjct: 141 RSSSTLENLTFSRPILEAADIKNIIITSEPYHMWRVKKLVEAGHLGRKINVSYAAASSQC 200
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ + AL+E + ++ Y +G
Sbjct: 201 WVNWG---------MAFKGALREPLAVINNYAKG 225
>gi|56965774|ref|YP_177508.1| hypothetical protein ABC4016 [Bacillus clausii KSM-K16]
gi|56912020|dbj|BAD66547.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 201
Score = 78.4 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 12/127 (9%)
Query: 75 GTTIIPTIPAIRIEPSFQSYS---RIFETMRLYKSCKQHSMHCTIIISGGDPQKH-GLAE 130
G I S + R+ + + LYK + ++ SGG E
Sbjct: 22 GYKKDDGKSGDCIFVPGSSKAVEYRVPKAVDLYKQGRAR----KLLFSGGVSWDETKTPE 77
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN----MQGKNIILVSSAYHLK 186
+++ K L G+ DI +E +SL T +N S ++ + K ++LV+++YH+
Sbjct: 78 AVLMKAKALSLGIAAKDILVEDRSLHTKENVLASLLVLDRAIDLHRIKRLLLVTASYHMP 137
Query: 187 RSQLYFQ 193
R L +
Sbjct: 138 RVYLMMR 144
>gi|311032605|ref|ZP_07710695.1| hypothetical protein Bm3-1_19074 [Bacillus sp. m3-13]
Length = 207
Score = 78.4 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQ-KHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ ++LY+ + I+ SGG + L+E+ + K +E GV +DI +E QS
Sbjct: 48 RLPPAIQLYQEGR----AGKILFSGGVVWDGNQLSEAQLLAEKAMELGVPSEDILIENQS 103
Query: 155 LDTFQNAQFSSSMIKN----MQGKNIILVSSAYHLKR 187
L T +N S ++ + +I+V+S YH++R
Sbjct: 104 LHTKENVLASLLVLDRALHLHKISRLIVVTSHYHMRR 140
>gi|302847168|ref|XP_002955119.1| hypothetical protein VOLCADRAFT_106645 [Volvox carteri f.
nagariensis]
gi|300259647|gb|EFJ43873.1| hypothetical protein VOLCADRAFT_106645 [Volvox carteri f.
nagariensis]
Length = 251
Score = 78.4 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 38/262 (14%), Positives = 81/262 (30%), Gaps = 55/262 (20%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTIL--LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
R + L + + + P L L L + PL ++ ++LG
Sbjct: 3 RVSLLSTAGALFVGLLAFALSPACLRWLHGLLAARTPPLPK---DAIADVAIVLGYALCR 59
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL--AESIVYNN 136
++ R+ + + + ++ SG P + E+ V
Sbjct: 60 NGSLTEPLK-------GRVQAGVDAFLQGRARH----LLFSGSHPGGVVVRRTEANVMRE 108
Query: 137 KLLESGVE------RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ + E S T++NA FS ++ K K +++V+S +H RS+L
Sbjct: 109 YAEQLMPAGEAAGWAERWLEEDASTSTYENALFSLAICKEKGWKTLLIVTSPFHQLRSEL 168
Query: 191 YFQ-------------------------------HFGINTKASCSDYLNAYYSIIPLSAN 219
F+ H + + + + PL+
Sbjct: 169 VFRRLVSEATKAAAGLAGQEAASAGGAGLARKDEHLAMEVFMARAAMVPHAGYFSPLANR 228
Query: 220 FYLTELALKEYIGILIAYYRGN 241
++E + ++ Y +G
Sbjct: 229 LVDLWDWIRELLALVYYYTKGR 250
>gi|116623760|ref|YP_825916.1| hypothetical protein Acid_4672 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226922|gb|ABJ85631.1| protein of unknown function DUF218 [Candidatus Solibacter usitatus
Ellin6076]
Length = 207
Score = 78.4 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 67/222 (30%), Gaps = 35/222 (15%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
++ +L + + +L+ L Y +S + I +L
Sbjct: 5 LWTAVALVLGGYILSAPLAGRWMLERLANQYPEMPVSSC--PTADAIAVLAG-----TGP 57
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
P + +R+ + L ++ + + E+
Sbjct: 58 PRAGEMRRGEPLNRMEAGITLLRAGRAPRL----------VMATDGEEAKGLRE------ 101
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG------ 196
+ D + + DT A+ + +ILV+S +H+ R+ F+
Sbjct: 102 IPDDRVLQLRPARDTADEARRIVGEARQQSWHRLILVTSGFHMGRALREFRRAAERAGVE 161
Query: 197 INTKASCSD------YLNAYYSIIPLSANFYLTELALKEYIG 232
+ +D + A S P + + + AL+E G
Sbjct: 162 LTVIPFAADPQVYERWPPAAKSWAPSISGWEFSTRALREMFG 203
>gi|310818213|ref|YP_003950571.1| hypothetical protein STAUR_0940 [Stigmatella aurantiaca DW4/3-1]
gi|309391285|gb|ADO68744.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 254
Score = 78.4 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 72/204 (35%), Gaps = 23/204 (11%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LS +FL + +L +R+ LL L + +Q Y +L Q
Sbjct: 35 PLSTVFLAMGRRGVLGVWMRRGVLAGALSLLGVLA--------LSRFVQVRYADRILPRQ 86
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + ++ G G A PS R+ + L++ K +++SG
Sbjct: 87 GAPEAPMALVFGAGL-------APGGVPSPVLAQRLDTAIALWREKKVGG----VLVSG- 134
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D E+ LLE G+ ++ + L T+ + + +LV+
Sbjct: 135 DNSDRFHDETRAMRRYLLERGLPETAVQGDNSGLSTYDS---CVRAYDVFGMRRALLVTQ 191
Query: 182 AYHLKRSQLYFQHFGINTKASCSD 205
+HL R+ G++ +D
Sbjct: 192 RFHLPRALYIANSVGMDAWGVAAD 215
>gi|194336436|ref|YP_002018230.1| protein of unknown function DUF218 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308913|gb|ACF43613.1| protein of unknown function DUF218 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 196
Score = 78.4 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 66/158 (41%), Gaps = 24/158 (15%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+ L F+ +LL L + P+ ++I++LG
Sbjct: 7 ITLIFFLSLTTAAALLLSCLGILVSQHAADPE---KCDVIIVLGG--------------- 48
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ R+ + LY + +I++G D + + + +++ GV + IK
Sbjct: 49 --DNGLRVRKGAELYNA----GYASHVILTGIDERFYRPSHPNWRERRMIALGVPKKAIK 102
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++T+S T++ A+ +S+ ++ K+ I+VS H+ R
Sbjct: 103 IDTKSKTTWEEAENTSNTMEKKGWKSAIIVSDPPHMLR 140
>gi|169350021|ref|ZP_02866959.1| hypothetical protein CLOSPI_00761 [Clostridium spiroforme DSM 1552]
gi|169293234|gb|EDS75367.1| hypothetical protein CLOSPI_00761 [Clostridium spiroforme DSM 1552]
Length = 426
Score = 78.0 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGG--DPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
+ + + + + + I+++GG P E L+ +GV+ + I +E ++
Sbjct: 140 LIDRLIVTLNSANRYPNAYIVVTGGGTSPADPSKTEGEEMAKWLIANGVDENRIIVENKA 199
Query: 155 LDTFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQH 194
T NA + ++K K+I ++SS+ H++R+ FQ
Sbjct: 200 PTTVGNATNTFRLLKEKPEVKSIAMISSSSHIQRAVAIFQA 240
>gi|297625646|ref|YP_003687409.1| hypothetical protein PFREUD_04300 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296921411|emb|CBL55964.1| Hypothetical membrane protein [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 261
Score = 78.0 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 67/195 (34%), Gaps = 20/195 (10%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
++ ++ +++ + +R + ++LG G P
Sbjct: 47 GVATLAVVAVLTAITAGCNVVVHAVAAGRRRTPGQLHAGVTPDTAMVLGAGVRGQRPTPY 106
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG-----GDPQKHGLAESIVYNNKLL 139
+ +R+ +RL++ I++SG GD E V + L+
Sbjct: 107 L--------AARLDLAVRLWRE----GAISRILVSGWAEAPGDAAGVRYDEPAVMADYLV 154
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV R + + LDT+ +A + + +++V+ AYHL R+ + GI+
Sbjct: 155 AHGVARGAVLRDPAGLDTWTSAVRARRL---HGLDAMVVVTQAYHLPRALAAARMAGIDA 211
Query: 200 KASCSDYLNAYYSII 214
+
Sbjct: 212 LGVADTTRDHNAKWW 226
>gi|308804261|ref|XP_003079443.1| unnamed protein product [Ostreococcus tauri]
gi|116057898|emb|CAL54101.1| unnamed protein product [Ostreococcus tauri]
Length = 417
Score = 78.0 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 20/137 (14%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV++ G T+P ++ R T I++SG
Sbjct: 203 DAIVVVAGGIEADGTLPPWVTPRLDRARERFEAT----------GGRVKILVSGSMTPHK 252
Query: 127 GLA---------ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NMQGKNI 176
ES + L+E GV + +T S+DT NA +S + + K +
Sbjct: 253 PPPMGPGGFNVHESTSMASYLMERGVPATAVLKDTASMDTIGNAYYSLCLHAIPLGWKRV 312
Query: 177 ILVSSAYHLKRSQLYFQ 193
+V+SA+H+ R++ F+
Sbjct: 313 EVVTSAFHMARTRAAFE 329
>gi|78061607|ref|YP_371515.1| hypothetical protein Bcep18194_B0757 [Burkholderia sp. 383]
gi|77969492|gb|ABB10871.1| protein of unknown function DUF218 [Burkholderia sp. 383]
Length = 207
Score = 78.0 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 12/136 (8%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ ++ V+ GN P +R+ +R Y++ + C + G
Sbjct: 27 PSEPADVAVIFGNALDEA-------GAPKPVLAARLDVGVRCYRTGQ-----CPAFLVSG 74
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
GL E+ + L+ GV D I ++ Q +T AQ + + ++ + +++VS
Sbjct: 75 AIDGPGLNEATAMRDYLVARGVPADRITVDDQGDNTLATAQHTLAYLQAHRQSRVLIVSQ 134
Query: 182 AYHLKRSQLYFQHFGI 197
YHL R++L F+ GI
Sbjct: 135 YYHLARARLAFERVGI 150
>gi|110597117|ref|ZP_01385406.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
gi|110341308|gb|EAT59773.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
Length = 599
Score = 77.6 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 81/234 (34%), Gaps = 40/234 (17%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W + + ++ + LF FIG ++ L + IV+
Sbjct: 397 WLMPLTVLLMLYLVIFHSPLFWFIGDQLVVRH--APL---------------KTDAIVVF 439
Query: 73 -GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
GNG + R R + +R Y+ I +S G ++ L+E
Sbjct: 440 SGNGESAYRNDSYQR---------RALDAVRFYRQ----GYAPHIFLSSG--KEQDLSEV 484
Query: 132 IVYNNKLLESGVERDDIKLETQ-SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
V L + GV I + + T +N + ++ +I+ ++S YH +R+
Sbjct: 485 DVIKLYLEDKGVAASAIHILDKYPKSTSENVEMVMQQLRRQGVHSILFLTSPYHGRRALW 544
Query: 191 YFQHFGINT---KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
++ + + D A A + + EY+ I+ +++G
Sbjct: 545 TWRKQAPDITVLTPAVVDTPPADPQW---GATVDQISVIVYEYVAIVYNWFQGR 595
>gi|330829063|ref|YP_004392015.1| transporter [Aeromonas veronii B565]
gi|328804199|gb|AEB49398.1| Transporter [Aeromonas veronii B565]
Length = 367
Score = 77.6 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 12/120 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV LG ++ I R+ T+ L K+ II++GG PQ
Sbjct: 196 AIVTLGYALNPDGSMDKI-------LLGRLQTTLELAKA----DPEALIILTGGVPQNRK 244
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E + + L G++R + E + T NA +S+ + Q +LVSSA H++R
Sbjct: 245 -TEGKLMADWLANHGIDRSRLIEENYATSTVDNALYSAYALARHQIDYAVLVSSASHVRR 303
>gi|196232763|ref|ZP_03131614.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
gi|196223223|gb|EDY17742.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428]
Length = 225
Score = 77.6 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 73/214 (34%), Gaps = 15/214 (7%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L R+ F++ L F+ + + + + ++ ++LG
Sbjct: 3 LSFLKRRSFWLVLTALALLFVAFVAGANY--WVIHSTREAIFTDLALLPKTDVALVLG-- 58
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
P+ R+ RLY K +++SG + G E
Sbjct: 59 ---TSRYNGDGHSPNPFFLGRMNTAARLYHEGKVRH----LLVSGDNGHV-GYDEPTWMR 110
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ L+ GV R I L+ T + + ++ + +V+ +H+ RS + +
Sbjct: 111 DALIARGVPRSAITLDYAGFRTLDSMARAKNV---FGLQRFTIVTDDFHISRSVFLARSY 167
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
G++ S+ + ++S + +A E
Sbjct: 168 GLDVVGFPSERVAYWWSKKVRTRELASRTVAFLE 201
>gi|113475668|ref|YP_721729.1| hypothetical protein Tery_2008 [Trichodesmium erythraeum IMS101]
gi|110166716|gb|ABG51256.1| protein of unknown function DUF218 [Trichodesmium erythraeum
IMS101]
Length = 213
Score = 77.6 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 61/174 (35%), Gaps = 28/174 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I ++ G G T P+ R+ + LY I+++G D
Sbjct: 52 IAIVFGAGIWEDGT-------PTPMLADRVQGAINLYNIGSIQ----KILMTG-DNSTPD 99
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E + GV +DI L++ T+++ + + +LV+ YHL R
Sbjct: 100 YNEVKAMQEYAINHGVSVEDIILDSSGFSTYKSCYRAKEI---FGITQAVLVTQNYHLPR 156
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFY---LTELALKEYIGILIAYY 238
+ + G++ +P F + +++E +L A++
Sbjct: 157 AVYTCRQLGVDVVGLG----------MPDWGKFRNDSMRRYSIREVFAVLKAFW 200
>gi|305680109|ref|ZP_07402919.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
gi|305660729|gb|EFM50226.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
Length = 162
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 71/178 (39%), Gaps = 25/178 (14%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I++LG+ T P SR+ + + TI++SG D
Sbjct: 2 AIIVLGSHTY--------EGRPGAVLASRLRKAHDIAARYPTE----TIVVSGQD----- 44
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ------GKNIILVSS 181
E+ V L+++G++ I +E + T +N + S +++++ G+ ++V+S
Sbjct: 45 --EAPVMATWLIDNGIDPARILIEPTATSTNENLERSLALLRSSGHPDPSRGQPFMVVTS 102
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+H R+ ++ H GI + L + + + L+A++R
Sbjct: 103 DFHKFRTLVWAWHLGIPITVLTAVTLPPHRQLDFARELTAFPHSLARVLWRRLVAWWR 160
>gi|226307188|ref|YP_002767148.1| hypothetical protein RER_37010 [Rhodococcus erythropolis PR4]
gi|226186305|dbj|BAH34409.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 229
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 72/228 (31%), Gaps = 30/228 (13%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
+ L + R++ + M + G + + + + + IV
Sbjct: 19 GFGAGLARWTRRLIAGAVLMAVVLVGGT---AFRVWQ---------VARIDDTRPADAIV 66
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG PS +R+ + +LYK + II GG + E
Sbjct: 67 VLGA--------AQYSGTPSSVFEARLEQAYKLYK----RGVAPQIITVGGKQEGDEYTE 114
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ L + G+ I DT + S+ + + + +LVS +H R++
Sbjct: 115 AASGKMYLTDRGIPSSAITAVETGSDTLLSIDAVSAEMSSQGINSAVLVSDPWHSLRTRT 174
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ G+ + + A ++ +E +L
Sbjct: 175 MARDTGLQAWTAPTRQGPAVFTRESQLHGIA------RETGALLWYQL 216
>gi|226308856|ref|YP_002768816.1| hypothetical protein RER_53690 [Rhodococcus erythropolis PR4]
gi|226187973|dbj|BAH36077.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 229
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 77/216 (35%), Gaps = 30/216 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ R +++ +L + + G I I + + D ++++LG
Sbjct: 11 PPRKRRWPRWVAGIAVLGAVVYAGSIVWISVASAGHT-----SDAADAPDAPVVIVLGA- 64
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+P R+ + L ++ K + +++SG D E
Sbjct: 65 -------QIKDGKPMAFLKGRLDAAVELVEAGKAKA----VLVSG-DANGGSGDEIAAMT 112
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
N L+E G++ I + LDT+ I ++V+ YH+ R+ +
Sbjct: 113 NYLVEQGIDERRIVGDPYGLDTYDT---CFRAIHTYGVTKALIVTQGYHVPRAVALCRDV 169
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
GI+ SD A ++I +A +E++
Sbjct: 170 GIDADGVNSDCGCATPTLIKNAA---------REWV 196
>gi|227502837|ref|ZP_03932886.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
gi|227076567|gb|EEI14530.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
Length = 151
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 59/161 (36%), Gaps = 35/161 (21%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
P SR+ + + LY T+I+SG E+ L++ GV+
Sbjct: 18 HGHPGAMLRSRLDKALELY-------SGQTVIVSG-------RGEAGAMAEYLIQRGVDP 63
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
D+ +E + T +N + + S+ + + +V++ +H R+ L+ H GI +
Sbjct: 64 ADVLVEPAATSTNENLENAHSLAPDDVLQ---VVTNDFHALRTTLWAWHLGIAINVHPA- 119
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIG-------ILIAYYR 239
+ + L+E + IL R
Sbjct: 120 ----------RTPWLAMPSNYLREVVATPHSVARILWRRLR 150
>gi|134098087|ref|YP_001103748.1| hypothetical protein SACE_1501 [Saccharopolyspora erythraea NRRL
2338]
gi|291007454|ref|ZP_06565427.1| hypothetical protein SeryN2_23263 [Saccharopolyspora erythraea NRRL
2338]
gi|133910710|emb|CAM00823.1| hypothetical protein SACE_1501 [Saccharopolyspora erythraea NRRL
2338]
Length = 204
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 65/182 (35%), Gaps = 18/182 (9%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ ++ +++V+LG +PS +R+ + + LY+ I
Sbjct: 28 VARADERRPVDMVVVLGA--------AQYHGKPSDVLEARLKQALELYREGMTDH----I 75
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+ GG E+ L+E GV D I DT + + +++ +
Sbjct: 76 VTVGGRQTGDKYTEAQAGKKWLVEEGVPADRITDVDVGSDTLGSVRAVAALAGQHGWSSA 135
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
++VS +H R++ FG+ T AS + I + + +E +L
Sbjct: 136 LIVSDPWHSLRARTMANDFGLETWASPT-----RSGPIVQTREIQF-QYIFRETGALLYY 189
Query: 237 YY 238
Sbjct: 190 RL 191
>gi|254472459|ref|ZP_05085859.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211958742|gb|EEA93942.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 239
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/231 (19%), Positives = 86/231 (37%), Gaps = 41/231 (17%)
Query: 17 CQSIRKIFF--MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+S RK F F L I L ++ +P + K + IV+L
Sbjct: 29 KRSGRKSFVRRAVRFFFLLFLICSVAFAAGFLWFVEV--LQPAVQAVVPKHADGIVVLTG 86
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV- 133
G RI +++ L + ++ISG P + +
Sbjct: 87 GR------------------DRISQSLDLL----ETGSAKRLLISGVHPSTSAKQIARLN 124
Query: 134 -YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
L + V+ D ++L+T NA+ ++S ++ Q ++++V+SAYH+ R+
Sbjct: 125 SKRMWLFDCCVDLDR-----KALNTIGNAEETASWVRKNQFNSLLVVTSAYHMPRALAEL 179
Query: 193 Q----HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
Q + L+ + S +T+L L+EY+ ++ R
Sbjct: 180 QVRLPEADLYPSPVYHKELDLEHWYESSS----ITKLLLREYVKYILVRLR 226
>gi|153839788|ref|ZP_01992455.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|260902700|ref|ZP_05911095.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
gi|149746696|gb|EDM57684.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|308108251|gb|EFO45791.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
Length = 212
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKLETQ 153
+ + I+ SGG+ + +E+ + + +GV D I +ET+
Sbjct: 34 VRVAEHAAALYHQKLAPLIVFSGGEGRFTDGLFEKSEAETFADIARLAGVPSDAILVETR 93
Query: 154 SLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHF 195
S ++ +N +F+ ++K + +IILV + +R+ F+
Sbjct: 94 STNSGENVRFTEQLLKEKGIQCESIILVQKPFMERRAIATFEKQ 137
>gi|28897926|ref|NP_797531.1| hypothetical protein VP1152 [Vibrio parahaemolyticus RIMD 2210633]
gi|260364389|ref|ZP_05777027.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|260877083|ref|ZP_05889438.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|260895744|ref|ZP_05904240.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
gi|28806140|dbj|BAC59415.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308088298|gb|EFO37993.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
gi|308093911|gb|EFO43606.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|308115173|gb|EFO52713.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
Length = 212
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKLETQ 153
+ + I+ SGG+ + +E+ + + +GV D I +ET+
Sbjct: 34 VRVAEHAAALYHQKLAPLIVFSGGEGRFTDGLFEKSEAETFADIARLAGVPSDAILVETR 93
Query: 154 SLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHF 195
S ++ +N +F+ ++K + +IILV + +R+ F+
Sbjct: 94 STNSGENVRFTEQLLKEKGIQCESIILVQKPFMERRAIATFEKQ 137
>gi|296120046|ref|ZP_06838600.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM
20306]
gi|295967200|gb|EFG80471.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM
20306]
Length = 155
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 21/136 (15%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ IV+LG+ T P SR+ + ++L K +I++G
Sbjct: 3 RADPIVVLGSRVTD--------GRPGALLLSRLNKALKLAKRM----PDAPVIVTGDG-- 48
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E+ V L E G++ + I E + T +N + +++ N + ++ V++ +H
Sbjct: 49 -----EAAVMARYLTERGIDPERIVEEPAATSTNENLENCFALVNNARVLHV--VTNEFH 101
Query: 185 LKRSQLYFQHFGINTK 200
R++L+ H GI K
Sbjct: 102 SLRTRLWAWHLGIPIK 117
>gi|54023435|ref|YP_117677.1| hypothetical protein nfa14680 [Nocardia farcinica IFM 10152]
gi|54014943|dbj|BAD56313.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 231
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/223 (15%), Positives = 72/223 (32%), Gaps = 30/223 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L + IR+ + M + G + + + IV+LG
Sbjct: 26 LARWIRRTVAAAVLMSMVLVGGTAV------------RVWQVARIDDYTPADAIVVLGA- 72
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
PS +R+ + L+++ + +I GG + E+
Sbjct: 73 -------AQYSGTPSSVFEARLDQAYDLFRA----GVAPRVITVGGKQEGDLYTEAASGK 121
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L GV + I DT ++ + + +K + + +LVS +H R++ +
Sbjct: 122 IYLEGRGVPTEAILAVETGSDTLRSVEAVALAMKAREMSSAVLVSDPWHSLRTRTMARDA 181
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
G+ + + A Y+ + +E +L
Sbjct: 182 GLRAWTAPTRTGPAVYTRESQAHGIA------RETFALLWYQL 218
>gi|284049952|ref|ZP_06380162.1| hypothetical protein AplaP_00605 [Arthrospira platensis str.
Paraca]
gi|291568189|dbj|BAI90461.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 229
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 75/218 (34%), Gaps = 28/218 (12%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
R + +S L + + +L + Y P+ ++ G G
Sbjct: 19 HWRLLLVLSVIGGLLTPFVLNLYINLLTQT--RRYTEIADVPEKPVA----IVFGAGLWA 72
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
T P+ RI + LYK + I+++G + E +
Sbjct: 73 DGT-------PTPMLADRIQGAIDLYKLGRVE----KILMTGDNGTPE-YNEVVAMQLYA 120
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
++ GV +DI+L+ T+++ + + + +L++ YHL R+ GI+
Sbjct: 121 IDQGVPSNDIRLDYAGFSTYESCYRAREI---FGIETAVLITQQYHLPRAVYICNRLGID 177
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + S FY +E + ++ A
Sbjct: 178 AIGFGTP---DWGKFRDDSMRFYTR----RELLAVVKA 208
>gi|209522662|ref|ZP_03271220.1| protein of unknown function DUF218 [Arthrospira maxima CS-328]
gi|209496711|gb|EDZ97008.1| protein of unknown function DUF218 [Arthrospira maxima CS-328]
Length = 229
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 77/209 (36%), Gaps = 23/209 (11%)
Query: 29 FMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
+L+ S IG + P +L L + R D + ++ G G T
Sbjct: 22 LLLVLSVIGGLLTPFVLNLYINLITQTRRYTEIADVPDKPVAIVFGAGLWADGT------ 75
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
P+ RI + LYK + I+++G + E + ++ GV +D
Sbjct: 76 -PTPMLADRIQGAIDLYKLGRVE----KILMTGDNGTPE-YNEVVAMQLYAIDQGVPAND 129
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I+L+ T+++ + + + +L++ YHL R+ GI+ +
Sbjct: 130 IRLDYAGFSTYESCYRAREI---FGIETAVLITQQYHLPRAVYICNRLGIDAIGFGTP-- 184
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIA 236
+ S FY +E + ++ A
Sbjct: 185 -DWGKFRDDSMRFYTR----RELLAVVKA 208
>gi|330464951|ref|YP_004402694.1| hypothetical protein VAB18032_04840 [Verrucosispora maris
AB-18-032]
gi|328807922|gb|AEB42094.1| hypothetical protein VAB18032_04840 [Verrucosispora maris
AB-18-032]
Length = 250
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 56/139 (40%), Gaps = 13/139 (9%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+++++LG T P IR+ R+ L + + +++SG
Sbjct: 75 ADVVIVLGTAVTEDGRQPGIRL------AGRLETAAELVRQQRAR----VVLVSGDGHGA 124
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
G + + + + GV+ I + LDT+ + + + + + ++V+ +YHL
Sbjct: 125 SGDETAAMTAHLTEQLGVDPQRIVADPYGLDTYDSCRRAREV---YGVERALIVTQSYHL 181
Query: 186 KRSQLYFQHFGINTKASCS 204
R+ + G++ +
Sbjct: 182 SRAVTLCRQLGVDADGVPA 200
>gi|225387776|ref|ZP_03757540.1| hypothetical protein CLOSTASPAR_01546 [Clostridium asparagiforme
DSM 15981]
gi|225046110|gb|EEG56356.1| hypothetical protein CLOSTASPAR_01546 [Clostridium asparagiforme
DSM 15981]
Length = 275
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 80/221 (36%), Gaps = 45/221 (20%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTI-LLKHLQFSYQRPLLSPQWKK 64
+FL+ W+ + R ++ ++ G + + ++ + P+
Sbjct: 42 LFLVYGKWYYRRNADRIPRWVPVSVVTTCVAGLTVFAAVCIMVFSGVAGSDPVGL----- 96
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ +++LG + R+ + + + + +++SGG Q
Sbjct: 97 --DYVIVLGA--------QGKEHTVNGSLKLRLDKAIE----YVEENPDTILVLSGGPMQ 142
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--------- 175
+E+ + + L +GV D + +E +S T +N FS +I+ +
Sbjct: 143 GEEKSEAELMYDYLRYNGVRPDQMLMEKRSASTVENVAFSRLVIEQDRLARKRKREALFQ 202
Query: 176 ----------------IILVSSAYHLKRSQLYFQHFGINTK 200
I +++S +H+ R++L + +GI
Sbjct: 203 PVGPGVEPLAPDKPLEIGVLTSNFHVFRARLTARKWGIENV 243
>gi|225020641|ref|ZP_03709833.1| hypothetical protein CORMATOL_00648 [Corynebacterium matruchotii
ATCC 33806]
gi|224946587|gb|EEG27796.1| hypothetical protein CORMATOL_00648 [Corynebacterium matruchotii
ATCC 33806]
Length = 162
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 71/178 (39%), Gaps = 25/178 (14%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I++LG+ T P SR+ + + TI++SG D
Sbjct: 2 AIIVLGSHTYA--------GRPGAVLASRLRKAHDIATRYPTE----TIVVSGQD----- 44
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ------GKNIILVSS 181
E+ V L+++G++ I +E + T +N + S +++++ G+ ++V+S
Sbjct: 45 --EAPVMATWLIDNGIDPARILIEPTATSTNENLERSLALLRSSGHPDPSRGQPFMVVTS 102
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+H R+ ++ H GI + L + + + L+A++R
Sbjct: 103 DFHKFRTLVWAWHLGIPITVLTAVTLPPHRQLDFARELTAFPHSLARVLWRRLVAWWR 160
>gi|205374987|ref|ZP_03227778.1| hypothetical protein Bcoam_18347 [Bacillus coahuilensis m4-4]
Length = 200
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 62/180 (34%), Gaps = 28/180 (15%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
LF F+ ++ IL L L+ ++I++L G
Sbjct: 12 VWFLFIFVMVLVLAMIL---LFKRSHTLLVEKNPPVPADVILVLSGGAQ----------- 57
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
R E +LY TI++S + + L+ GV + I
Sbjct: 58 -----GEREAEAAKLYHEGYTD----TIVVSMAKVGWNTYT-GDIMREHLIHLGVPDNAI 107
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF----GINTKASCS 204
T + A+ + +++ + + +IL +S++H R++ F+ GI +
Sbjct: 108 LTYGDVTSTREEAEQAVPLLEELAVRKMILTTSSFHSGRAKWIFERTLKEKGIEVISVPV 167
>gi|309781486|ref|ZP_07676222.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
gi|308919899|gb|EFP65560.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
Length = 168
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 63/176 (35%), Gaps = 30/176 (17%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
++IV+LG +S R+ LY + + +SG
Sbjct: 22 AHADVIVVLGG-----------------ESGQRVIGAAELYHA----GAAPRVFVSGQG- 59
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ ++ +L+ +GV + I E S T +NA+ + + Q ++ ILV+S Y
Sbjct: 60 ------DCLLIERRLVMAGVPAERIGHECVSGSTMENARMTRETLAGQQVQSAILVTSWY 113
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
H R+ F+ + + + S Y L EY+ + R
Sbjct: 114 HTGRALAVFRKA-WPEITWGAQGVFP-GDTLAKSVPVYEAGSILAEYVKRVWYAVR 167
>gi|257063415|ref|YP_003143087.1| uncharacterized membrane protein [Slackia heliotrinireducens DSM
20476]
gi|256791068|gb|ACV21738.1| uncharacterized membrane protein [Slackia heliotrinireducens DSM
20476]
Length = 212
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 63/188 (33%), Gaps = 23/188 (12%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGII-PTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
++ +++ W ++ T L+ + + IV+LG
Sbjct: 7 KFLLALLIAAVVVVGGLNAWVVMSATTDDYTLEQA-------QELDVQAECIVVLGASVL 59
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
T PS R+ + LY S +I+ G+ + E
Sbjct: 60 PDGT-------PSDILKGRLDAAIALY-----ESGAAPVIVMSGNGTESNYDEPFHMKQY 107
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+E GV D I L+ T+ +++ + I+++ YHL RS + G+
Sbjct: 108 AIEQGVPADAIVLDRAGYHTYDTMWRLANI---YGADSCIVITQEYHLYRSVFDAKSCGM 164
Query: 198 NTKASCSD 205
+ SD
Sbjct: 165 DAVGVVSD 172
>gi|159186332|ref|NP_355852.2| hypothetical protein Atu4812 [Agrobacterium tumefaciens str. C58]
gi|159141466|gb|AAK88637.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 232
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 66/175 (37%), Gaps = 35/175 (20%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+ K + +++ IG + + L L+ ++IV+LG
Sbjct: 33 WLWKRNSIVLGVIILGAIGLYGLALVSAGSL-------LVVEDPPAQADVIVVLGG---- 81
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
R + +L+ K ++++G + + L
Sbjct: 82 -------------DGPPRAAQAAKLWHEGK----APLVLVTGYG-------DCDFIRDML 117
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ SGV+ + E SL T++NA F+ ++ M K ILV+S +H +R+ F+
Sbjct: 118 VRSGVDFAAVSTECLSLSTWENATFAQPILTGMGAKRAILVTSWFHSRRAVKRFR 172
>gi|78223525|ref|YP_385272.1| hypothetical protein Gmet_2322 [Geobacter metallireducens GS-15]
gi|78194780|gb|ABB32547.1| protein of unknown function DUF218 [Geobacter metallireducens
GS-15]
Length = 200
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 79/208 (37%), Gaps = 44/208 (21%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG-NIIVLLGNGTTIIP 80
+FF F LL F+ ++ T+L + S + + + IV+L G
Sbjct: 2 ALFFRGLFSLLVIFL---VVATVLF----VDFAYKTFSVRQRDIATDAIVVLAGGR---- 50
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
R+ E +RL+++ K + + DP +V +L +
Sbjct: 51 --------------GRVEEGIRLFRAKKGKYLFLIGV----DP--------MVRKQELFQ 84
Query: 141 SGVER---DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF-- 195
D + LE S +T +NA + +I ++I L++S YH+KR+ L F+
Sbjct: 85 ERKGESLADRVVLENASRNTLENALYGREIIDRKDIRSISLITSRYHMKRATLIFRSTLP 144
Query: 196 -GINTKASCSDYLNAYYSIIPLSANFYL 222
I D +N + +F L
Sbjct: 145 RDIAIYPHPVDTINLKEAWWRDQGSFRL 172
>gi|148927911|ref|ZP_01811320.1| protein of unknown function DUF218 [candidate division TM7
genomosp. GTL1]
gi|147886745|gb|EDK72306.1| protein of unknown function DUF218 [candidate division TM7
genomosp. GTL1]
Length = 207
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 52/136 (38%), Gaps = 19/136 (13%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG------ 120
++IV+L A ++ P ++ + + + I +SG
Sbjct: 17 DLIVVL-----------AQKLHPGWKLAPDLQRRLDHARDLYLADKAPLIAVSGRWVITY 65
Query: 121 -GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIIL 178
+ E+ L+E GV + I E S DT NA F +++ G + +++
Sbjct: 66 EAKGIVPPITEAECMKRYLIEQGVPANAILKEETSQDTIGNAYFIKQLVQERPGLRRLLI 125
Query: 179 VSSAYHLKRSQLYFQH 194
V + HL+R F H
Sbjct: 126 VCATPHLRRVCYIFDH 141
>gi|269104711|ref|ZP_06157407.1| hypothetical protein VDA_000868 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161351|gb|EEZ39848.1| hypothetical protein VDA_000868 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 215
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 27/136 (19%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K + IV+LG+ + L+ + ++ SGG
Sbjct: 23 KPADCIVVLGSNDVRVAE-----------------RAAELFH----LGLSSKVLFSGGVG 61
Query: 124 QKH----GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNII 177
+ +E+ + + + GV +D I +E++S +T +N FS + + ++I+
Sbjct: 62 ELTQNMFDCSEAEAFASIAMSLGVPQDAILIESRSTNTGENILFSQQLFDQERINPQSIL 121
Query: 178 LVSSAYHLKRSQLYFQ 193
LV + +R+ Q
Sbjct: 122 LVQKPFMERRAFATAQ 137
>gi|300703293|ref|YP_003744895.1| hypothetical protein RCFBP_10965 [Ralstonia solanacearum CFBP2957]
gi|299070956|emb|CBJ42264.1| conserved protein of unknown function, DUF218 [Ralstonia
solanacearum CFBP2957]
Length = 190
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 66/178 (37%), Gaps = 30/178 (16%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++IV+LG +S R+ LY + + + +SG
Sbjct: 42 MPGHADVIVVLGG-----------------ESGQRVIGAAELYHA----GVASRVFVSG- 79
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ ++ +L+ +GV I E +S +T +NA+ + M+ ++ +LV+S
Sbjct: 80 ------EGDCLLIVRRLVMAGVPAGRIGHECESGNTMENARMTRRMLDGQPVRSAVLVTS 133
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YH R+ F+ + + + + S Y + L EY+ R
Sbjct: 134 WYHTGRALHAFRR--VWPEVAWRARGVFPGDTLAKSFPIYESGSILAEYLKRAWYAVR 189
>gi|229488511|ref|ZP_04382377.1| integral membrane protein [Rhodococcus erythropolis SK121]
gi|229324015|gb|EEN89770.1| integral membrane protein [Rhodococcus erythropolis SK121]
Length = 235
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 77/216 (35%), Gaps = 30/216 (13%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ R +++ +L + + G I I + + D ++++LG
Sbjct: 17 PPRKRRWPRWVAGIAVLGAVVYAGSIVWISVASAGHT-----SDAADAPDAPVVIVLGA- 70
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
+P R+ + L ++ K + +++SG D E
Sbjct: 71 -------QIKDGKPMAFLKGRLDAAVELVEAGKAKA----VLVSG-DANGGSGDEIAAMT 118
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
N L+E G++ I + LDT+ I ++V+ YH+ R+ +
Sbjct: 119 NYLVEQGIDARRIVGDPYGLDTYDT---CFRAIHTYGVTKALIVTQGYHVPRAVALCRDV 175
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
GI+ SD A ++I +A +E++
Sbjct: 176 GIDADGVNSDCGCATPTLIKNAA---------REWV 202
>gi|213966359|ref|ZP_03394540.1| transporter [Corynebacterium amycolatum SK46]
gi|213951008|gb|EEB62409.1| transporter [Corynebacterium amycolatum SK46]
Length = 202
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 71/191 (37%), Gaps = 30/191 (15%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWG--------IIPTILLKHLQFSYQRPLLSPQWKKDGN-- 67
+S R I ++L + +G + + +K S P++ +
Sbjct: 3 RSFRAIAMAEVGLILTASAVFGSGAVANANPVSAVAVKAFNSSLVTPVVVSPLGRAAAEA 62
Query: 68 -------IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
I++LG R+ P + + + + +S +I++G
Sbjct: 63 ALLDPQVPIIVLGA-----------RLNPDCSAPAVLTSRLETARSLALRHPLNPVIVTG 111
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNIIL 178
G Q E+ + L GV + I +ET S T +NA ++ + ++ + ++
Sbjct: 112 GRTQPGCQTEAEYMRDALASMGVWKRRITMETNSDSTVENAAGTAYLAESGTSGVRAAVI 171
Query: 179 VSSAYHLKRSQ 189
V+S H R++
Sbjct: 172 VTSPTHTPRAR 182
>gi|118580810|ref|YP_902060.1| hypothetical protein Ppro_2396 [Pelobacter propionicus DSM 2379]
gi|118503520|gb|ABL00003.1| protein of unknown function DUF218 [Pelobacter propionicus DSM
2379]
Length = 198
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 62/165 (37%), Gaps = 30/165 (18%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + + IV+L G R+ E +RL++ K H + +
Sbjct: 34 QREVRADAIVVLAGGK------------------GRVDEGVRLFRQGKGHWLFFIGV--- 72
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ S +Y + LE S +T +NA + +I ++I+L++
Sbjct: 73 ----DPTVRRSDLYRP--RPGDPPASGVILEKASRNTLENAVYGRDVIMERNVRSILLIT 126
Query: 181 SAYHLKRSQLYFQHF---GINTKASCSDYLNAYYSIIPLSANFYL 222
S YH+KR+ + ++ + D N + ++F+L
Sbjct: 127 SRYHMKRASILLRNALPKDVAIYPYPVDTANLKEAWWSHRSSFHL 171
>gi|226361567|ref|YP_002779345.1| hypothetical protein ROP_21530 [Rhodococcus opacus B4]
gi|226240052|dbj|BAH50400.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 222
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 25/186 (13%), Positives = 72/186 (38%), Gaps = 20/186 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ +R++ + + + + + + + + S + + + ++++LG
Sbjct: 4 RRIVRRLVGIGAGLGALAVL--VVAASTVWISREASGH--VYDVEDAPEAPVVIVLGA-- 57
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ P + R+ +RL + + + +++SG D E +
Sbjct: 58 QVRDGKPQEYL------AGRLDVAVRLVRDGRARA----VLVSG-DGNGRSGDEIAAMTD 106
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+E+G++R I + LDT+ + ++ ++V+ +H+ R+ + G
Sbjct: 107 YLVENGIDRSKIVGDRYGLDTYDT---CARAVQTYGVTKALIVTQGFHVPRAVALCRGAG 163
Query: 197 INTKAS 202
I+
Sbjct: 164 IDVAGV 169
>gi|282861775|ref|ZP_06270839.1| protein of unknown function DUF218 [Streptomyces sp. ACTE]
gi|282563591|gb|EFB69129.1| protein of unknown function DUF218 [Streptomyces sp. ACTE]
Length = 245
Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 16/158 (10%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+ G G + PS R+ LY+S K +++ GD +
Sbjct: 71 VVFGAGL--------WQGRPSPYLAHRLDAAAELYRSGKV-----KVLLVTGDNSRVEYD 117
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E L GV I + DT+ + + + +LVS +H++R+
Sbjct: 118 EPDAMRTYLTAHGVPDGRIVSDYAGFDTWDSCVRAKKI---FGVDRAVLVSQGFHIRRAV 174
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ GI+ D ++ + + AL
Sbjct: 175 ALCRSAGIDAYGVGVDAVHDATWYYGGAREVFAAGKAL 212
>gi|218459892|ref|ZP_03499983.1| hypothetical protein RetlK5_10494 [Rhizobium etli Kim 5]
Length = 165
Score = 75.7 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 11/157 (7%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIG-WGIIPTILLKHLQFSYQRPLLSPQ 61
L+++ + + L + F + L F+ + +L++ L+ + +P P+
Sbjct: 17 LAFLLVFFALLAGLRRWRALSLFATAGGALILFVTLYTTAGNLLMQGLEQRFPKPAGDPE 76
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ +++LG IE + + R E +RL + Q I+ISGG
Sbjct: 77 NLQ---CMIVLGGAFENEVNTARHGIEFN-AAADRFVEALRLAQKFPQS----RILISGG 128
Query: 122 DPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLD 156
D G+ E G+ +D + E QS
Sbjct: 129 DGSLSGIYEGDAAASERFFPLFGIGKDRLIEERQSRT 165
>gi|170726169|ref|YP_001760195.1| hypothetical protein Swoo_1816 [Shewanella woodyi ATCC 51908]
gi|169811516|gb|ACA86100.1| protein of unknown function DUF218 [Shewanella woodyi ATCC 51908]
Length = 166
Score = 75.7 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 14/128 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP---Q 124
IV+LG S + SR L + H II +GG
Sbjct: 4 AIVVLGA-------PNDSDGNLSVMALSRCD----LAYTYFSQKNHLKIICTGGVGAHFN 52
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ N L+ GV + + +S TF++A + +I+ + ++++V+S +H
Sbjct: 53 TTSTPHAQYLKNYLMSKGVPQINFLPLVESRFTFEDALLAREVIEEHKITSLVIVTSEFH 112
Query: 185 LKRSQLYF 192
L R++L F
Sbjct: 113 LPRAKLVF 120
>gi|197119576|ref|YP_002140003.1| hypothetical protein Gbem_3208 [Geobacter bemidjiensis Bem]
gi|197088936|gb|ACH40207.1| YdcF-like protein of unknown function DUF218 [Geobacter
bemidjiensis Bem]
Length = 196
Score = 75.7 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 35/189 (18%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
LL ++ I+L L + S Q + IV+L G
Sbjct: 2 ALLKGLFSLMVLILIVLSVLFVDFVYKTFSLSQRDVHADAIVVLTGGR------------ 49
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
R+ E ++LY++ + + + + L G +++
Sbjct: 50 ------GRVEEGVKLYRAGQGKLLFLIGV-------------DPLVKKHELYQGAGAENV 90
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF---GINTKASCSD 205
LE S +T +NA ++ MI + +I L++S YH+KRS + F++ + D
Sbjct: 91 YLEKTSRNTLENAIYARDMIMKHKVSSIKLITSRYHMKRSTILFRNAFPKDVAIYPHPVD 150
Query: 206 YLNAYYSII 214
N
Sbjct: 151 SSNLKEEWW 159
>gi|320335290|ref|YP_004172001.1| hypothetical protein Deima_2706 [Deinococcus maricopensis DSM
21211]
gi|319756579|gb|ADV68336.1| protein of unknown function DUF218 [Deinococcus maricopensis DSM
21211]
Length = 193
Score = 75.7 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 16/124 (12%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q ++ +++LG PA R +R+ +RLY++ I++SG
Sbjct: 34 QPERPAPTLLVLGAAQYNGQPSPAFR--------ARLDHALRLYRA----GGVTRIVVSG 81
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G +E V L GV + ET + T QN + S ++++ + LV+
Sbjct: 82 GTGPGDRYSEGAVGAAYLRAHGVPASALAAETHARSTLQNLRLSRALLRG----PVTLVT 137
Query: 181 SAYH 184
+ H
Sbjct: 138 DSVH 141
>gi|148658348|ref|YP_001278553.1| hypothetical protein RoseRS_4260 [Roseiflexus sp. RS-1]
gi|148570458|gb|ABQ92603.1| protein of unknown function DUF218 [Roseiflexus sp. RS-1]
Length = 193
Score = 75.7 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 75/207 (36%), Gaps = 25/207 (12%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+G+G++ I L L+ + + IV+LG P +
Sbjct: 1 MGFGVLVLIASLILPLLVAPWLIVDDAGETADAIVVLGG--EAYPP-------------N 45
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHG--LAESIVYNNKLLESGVERDDIKLETQ 153
R + LYK + ++ +GG ++ + V L G+ + +
Sbjct: 46 RTIHALNLYKQQR----APVVVFTGGALPGQPPEISSARVALRYALARGLPAEVALVVDT 101
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYY 211
+ T+ A + + +++I+V+ YH +R+ F+ + AS + +L+ +
Sbjct: 102 AQSTYDEATLVRDLAAHHGWRSLIIVTDPYHTRRAVRTFRSIIPDVQVTASVAPFLDTFA 161
Query: 212 SIIPLSANFYLTELALKEYIGILIAYY 238
PLS + A E I +
Sbjct: 162 D--PLSRGVRVWRYAAAELIKMAFYRL 186
>gi|39942836|ref|XP_360955.1| hypothetical protein MGG_03498 [Magnaporthe oryzae 70-15]
gi|145009948|gb|EDJ94604.1| hypothetical protein MGG_03498 [Magnaporthe oryzae 70-15]
Length = 260
Score = 75.7 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLE 151
R+ E +I SGG + E+ V+ GV I +E
Sbjct: 42 RVAERAAQLLLDGFAGADGVLIFSGGSGKLTETRFSEPEAEVFAAVARRMGVPPARILVE 101
Query: 152 TQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHF 195
+S +T +N +F+ +++++ ++ ILV Y +R+ F
Sbjct: 102 PRSSNTGENVRFTRALLRDRGLSPRSFILVQKPYMERRTYATFVKQ 147
>gi|306835435|ref|ZP_07468453.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
gi|304568671|gb|EFM44218.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
Length = 151
Score = 75.7 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 58/161 (36%), Gaps = 35/161 (21%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
P SR+ + + LY T+I+SG E+ L + GV+
Sbjct: 18 HGHPGAMLRSRLDKALELYSGQ-------TVIVSG-------RGEAGAMAEYLFQRGVDP 63
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
D+ +E + T +N + + S+ + + +V++ +H R+ L+ H GI +
Sbjct: 64 ADVLVEPAATSTNENLENAHSLAPDAVLQ---VVTNDFHALRTTLWAWHLGIAINVHPA- 119
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIG-------ILIAYYR 239
+ + L+E + IL R
Sbjct: 120 ----------RTPWLSMPSNYLREVVATPHSAARILWRRLR 150
>gi|322420740|ref|YP_004199963.1| hypothetical protein GM18_3250 [Geobacter sp. M18]
gi|320127127|gb|ADW14687.1| protein of unknown function DUF218 [Geobacter sp. M18]
Length = 195
Score = 75.7 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 69/173 (39%), Gaps = 35/173 (20%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y+ LSP+ + + IV+L G R+ E +RLY++ + +
Sbjct: 27 YKTFSLSPRDTQ-ADAIVVLTGGR------------------GRVEEGVRLYRAGQGKKL 67
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+ DP V +L + + LE S +T +NA ++ +I +
Sbjct: 68 FLIGV----DPS--------VKKRELFQGD-GEGGVYLEQNSRNTLENAIYARDLIMKHK 114
Query: 173 GKNIILVSSAYHLKRSQLYFQHF---GINTKASCSDYLNAYYSIIPLSANFYL 222
++I L++S YH+KRS + F++ + D N S +F L
Sbjct: 115 VRSIKLITSRYHMKRSTILFRNALPRYVAIYPHPVDSSNLKEQWWRHSGSFKL 167
>gi|225872632|ref|YP_002754089.1| hypothetical protein ACP_0982 [Acidobacterium capsulatum ATCC
51196]
gi|225793427|gb|ACO33517.1| conserved hypothetical protein [Acidobacterium capsulatum ATCC
51196]
Length = 218
Score = 75.7 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 59/175 (33%), Gaps = 19/175 (10%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
R + + I + G P +R +R+ + LY+ +
Sbjct: 51 RSYETHDEARPAGAIAVFGAAEYDGTPSPVLR--------ARLDHALALYQE----GLAP 98
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+I GG E V + L+ GV I ET+S DT ++ + +++ +
Sbjct: 99 LVITLGGRENGDTHTEGGVGRDYLMAHGVPEASIIAETKSDDTEESVARLAVIVRKNHIE 158
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
+ +VS HL R G+ + + + P + + L E
Sbjct: 159 TLDVVSDGSHLFRIHALCVAAGLKV------FTSPRPDLRPAPLEYLIRRR-LHE 206
>gi|241668733|ref|ZP_04756311.1| hypothetical protein FphipA2_08195 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254877264|ref|ZP_05249974.1| predicted protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254843285|gb|EET21699.1| predicted protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 357
Score = 75.7 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 14/129 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV LG ++ I + + +++ + + + II+ GG G
Sbjct: 189 AIVTLGYSLNDDGSMNNI-----------LVDRLKITLAAHKKYPNAIIIVLGG-VAHEG 236
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNA--QFSSSMIKNMQGKNIILVSSAYHL 185
+ ES L++ + I E QS T NA + N KNI+L+SS H+
Sbjct: 237 VTESYQMKQWLIKHDIAAQSIIQEDQSTSTVTNAINTINIIKKINRPVKNILLISSDSHI 296
Query: 186 KRSQLYFQH 194
+R+ F+
Sbjct: 297 RRANSIFEQ 305
>gi|307353054|ref|YP_003894105.1| hypothetical protein Mpet_0899 [Methanoplanus petrolearius DSM
11571]
gi|307156287|gb|ADN35667.1| protein of unknown function DUF218 [Methanoplanus petrolearius DSM
11571]
Length = 182
Score = 75.3 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 15/133 (11%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K + +I++LGN + + R+ +++++ +++SGG
Sbjct: 3 PKDETTVIIILGN--------RLQSKQIHQELKGRMDCGLKVFREE-----GGILLLSGG 49
Query: 122 DPQKH-GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILV 179
+ E + + + GV+ +I E SLDT NA FS ++ + I ++
Sbjct: 50 RSNPEIDVPECGIMKDYAVGRGVDPSNIITEDSSLDTIGNAVFSREIVDKLDAVSKIFVI 109
Query: 180 SSAYHLKRSQLYF 192
+S YH++RS+ F
Sbjct: 110 TSCYHVERSRYLF 122
>gi|229490318|ref|ZP_04384160.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229322850|gb|EEN88629.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length = 206
Score = 75.3 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 18/178 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV+LG PS +R+ + +LYK + II G
Sbjct: 34 DDTRPADAIVVLGA--------AQYSGTPSSVFEARLEQAYKLYK----RGVAPQIITVG 81
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G + E+ L + G+ I DT + S+ + + + +LVS
Sbjct: 82 GKQEGDEYTEAASGKMYLTDRGIPSSAITAVETGSDTLLSIDAVSAEMSSQGINSAVLVS 141
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+H R++ + G+ + + A ++ +E +L
Sbjct: 142 DPWHSLRTRTMARDTGLQAWTAPTRQGPAVFTRESQLHGIA------RETGALLWYQL 193
>gi|270618447|ref|ZP_06221747.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270317953|gb|EFA29258.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 308
Score = 75.3 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 68/167 (40%), Gaps = 18/167 (10%)
Query: 4 SWIFLIVS--YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+++ LI++ + + + + K + F L+ I +LL + P L+
Sbjct: 157 TFVLLIIAAIIYCVHFKKLAKFIALISFTWLY--IMSAPFTGLLLT---DNDDIPALTLD 211
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
K IV+LG G + P + S + E +R Y + Q I+ +G
Sbjct: 212 EYKQAQAIVILGGG-----SYPTKELYAETASGAPQLERLR-YAAFLQKETGLPILTTGY 265
Query: 122 DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSM 167
G++E + +L + V +E ++ +T +NA F+ ++
Sbjct: 266 S--LIGISEGDLMAKELNQFFNVPTQ--WIENKARNTEENASFTKNI 308
>gi|258514186|ref|YP_003190408.1| hypothetical protein Dtox_0889 [Desulfotomaculum acetoxidans DSM
771]
gi|257777891|gb|ACV61785.1| protein of unknown function DUF218 [Desulfotomaculum acetoxidans
DSM 771]
Length = 236
Score = 75.3 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 15/142 (10%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ I++LG + P S R+ LY+ K +I+SG D
Sbjct: 55 PKSDAILILGA--YVYPN-----GIVSTMLNDRLTVGFELYQRGK----AAKLIVSG-DH 102
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
K E L++ G +D+ ++ T+++ + + + KNII+V+ Y
Sbjct: 103 GKFSYDEVNAMKKFLIDKGARNEDVFMDHAGFSTYESLYRARDIFQA---KNIIIVTQQY 159
Query: 184 HLKRSQLYFQHFGINTKASCSD 205
HL R+ + G+ +D
Sbjct: 160 HLLRAVFIARELGLKAYGVAAD 181
>gi|119356675|ref|YP_911319.1| hypothetical protein Cpha266_0844 [Chlorobium phaeobacteroides DSM
266]
gi|119354024|gb|ABL64895.1| protein of unknown function DUF218 [Chlorobium phaeobacteroides DSM
266]
Length = 219
Score = 75.3 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 63/171 (36%), Gaps = 29/171 (16%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTIL--LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
R + + + LF L +L Y + K ++I++LG
Sbjct: 20 KKRTMKALFKLISLFVLTACTSAGIFFISLGYLVSLYA------EKPKPADVIIVLGG-- 71
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ R+ + LY +I++G D + + +
Sbjct: 72 ---------------DNGLRVKKGAELYND----GYAPRVILTGIDARFYRPSHPDWRER 112
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++ GV + I+++T+S +++ A SS +++ K I+VS HL R
Sbjct: 113 RMRALGVPKKSIRIDTRSASSWEEALNSSRLMEKKGWKTAIVVSDPPHLFR 163
>gi|261492344|ref|ZP_05988906.1| transporter [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261496130|ref|ZP_05992538.1| transporter [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261308232|gb|EEY09527.1| transporter [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261312027|gb|EEY13168.1| transporter [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 372
Score = 75.3 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
PQ + I + G+ P PS R+ +T K Q II+S
Sbjct: 201 PQTAMIPDTIAVFGS-------TPNKDGTPSPLLLDRLQKT----KEMAQKFPQAKIIVS 249
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG + AE+ V L E+G+E+D + L+ + DT NA +++ GK ++ +
Sbjct: 250 GGAVKTE-FAEADVMAKWLSENGIEKDRLLLDPVARDTPGNAVGIIKLMQTYNGKKVLGI 308
Query: 180 SSAYHLKRS----QLYFQHFGINTK 200
+ H+ R+ + Y QH G +
Sbjct: 309 GTLQHIPRATAVLKGYAQHIGYPIE 333
>gi|299065943|emb|CBJ37124.1| conserved protein of unknown function, DUF218 [Ralstonia
solanacearum CMR15]
Length = 180
Score = 75.3 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 64/177 (36%), Gaps = 30/177 (16%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++IV+LG +S R+ LY + + + +SGG
Sbjct: 33 PGRADVIVVLGG-----------------ESGQRVIGAAELYHA----GVAPRMFVSGGG 71
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ ++ +L +GV + I E +S T +NA+ + + ++ +LV+S
Sbjct: 72 -------DCLLIVRRLEMAGVPAERIGHECESGSTMENARMTRRTLAGQPVRSAVLVTSW 124
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YH R+ F+ + + + S Y + L EYI R
Sbjct: 125 YHTGRALNVFRR--VWPEVAWGARGVFPGDTFAKSFPIYESGSILAEYIKRTWYAVR 179
>gi|258652152|ref|YP_003201308.1| hypothetical protein Namu_1930 [Nakamurella multipartita DSM 44233]
gi|258555377|gb|ACV78319.1| protein of unknown function DUF218 [Nakamurella multipartita DSM
44233]
Length = 203
Score = 75.3 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 64/181 (35%), Gaps = 19/181 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV+LG PS +R+ LY++ + I+ G
Sbjct: 33 DERAAADAIVVLGAAQYNGD--------PSPVFQARLDHAAELYRA----GVAPRIVTVG 80
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E L +G++R + + DT + + ++ ++ + +++LV+
Sbjct: 81 GGQVDDATTEGAAGAAYLQAAGIDRAALTAVGEGGDTLASLRAAAPVLAELGVSSVVLVT 140
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
H RS L + G + S A + E L+E +G+L G
Sbjct: 141 DPAHSARSALMARDLGWTVQTSPVRQGPAVRDSV-------HAEYQLRETLGLLYYRVVG 193
Query: 241 N 241
Sbjct: 194 G 194
>gi|254360530|ref|ZP_04976679.1| hypothetical protein MHA_0079 [Mannheimia haemolytica PHL213]
gi|153091070|gb|EDN73075.1| hypothetical protein MHA_0079 [Mannheimia haemolytica PHL213]
Length = 372
Score = 75.3 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
PQ + I + G+ P PS R+ +T K Q II+S
Sbjct: 201 PQTAMIPDTIAVFGS-------TPNKDGTPSPLLLDRLQKT----KEMAQKFPQAKIIVS 249
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG + AE+ V L E+G+E+D + L+ + DT NA +++ GK ++ +
Sbjct: 250 GGAVKTE-FAEADVMAKWLSENGIEKDRLLLDPVARDTPGNAVGIIKLMQTYNGKKVLGI 308
Query: 180 SSAYHLKRS----QLYFQHFGINTK 200
+ H+ R+ + Y QH G +
Sbjct: 309 GTLQHIPRATAVLKGYAQHIGYPIE 333
>gi|319652939|ref|ZP_08007044.1| hypothetical protein HMPREF1013_03659 [Bacillus sp. 2_A_57_CT2]
gi|317395288|gb|EFV76021.1| hypothetical protein HMPREF1013_03659 [Bacillus sp. 2_A_57_CT2]
Length = 199
Score = 74.9 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS--RIFETMRLYKSCKQHSMHCT 115
SP + +I +LL G + P + R+ E +RLY+ + +
Sbjct: 6 FSPSHLSENDISMLLYYGIEDNLQKGDLIFVPGSSKAAEYRLPEAIRLYQKGRAN----K 61
Query: 116 IIISGG-DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--- 171
++ SGG H L E+ + K + G+ D+ +E SL T +N S ++ M
Sbjct: 62 LLFSGGVRWSGHELTEAEMLMKKAIGFGIPPKDLFIENISLHTKENVLASMLVMDRMCGL 121
Query: 172 -QGKNIILVSSAYHLKR 187
NII+V++ +H++R
Sbjct: 122 ENISNIIIVTAPFHMRR 138
>gi|239813908|ref|YP_002942818.1| hypothetical protein Vapar_0901 [Variovorax paradoxus S110]
gi|239800485|gb|ACS17552.1| protein of unknown function DUF218 [Variovorax paradoxus S110]
Length = 201
Score = 74.9 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 17/169 (10%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+LL + + +I ++ + + P P + ++LG + +P
Sbjct: 8 VLLAGLLAYLVIAAVIWRRAAEALANPPQRP-----ADAALVLG-------NRAFLDGKP 55
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+ R+ + L + +++SGG ++ G E+ V G +
Sbjct: 56 NPCLTGRVDAAIALA----DAGLAKQLVLSGGVDKEDGRIEAEVMQRHARAQGY-AGPLL 110
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
LE S T N S ++K +I+VS YHL R + + G +
Sbjct: 111 LEPASTSTRLNLAMSRPLLKAAGIHGVIVVSEPYHLWRVERLARASGFD 159
>gi|281354956|ref|ZP_06241450.1| protein of unknown function DUF218 [Victivallis vadensis ATCC
BAA-548]
gi|281317836|gb|EFB01856.1| protein of unknown function DUF218 [Victivallis vadensis ATCC
BAA-548]
Length = 260
Score = 74.9 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 86/229 (37%), Gaps = 19/229 (8%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
C+ KI ++ L GI + + L Y + ++ + V+ G+G
Sbjct: 39 CRKWGKILLVAAIALFLVA---GIFGQVFRETLTGRYPPLDPALLPPEEYTL-VVAGSGF 94
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE--SIVY 134
+ P + A + + R+ E R+ + ++ + C+I G G E
Sbjct: 95 SGAPGL-APELRFNDAMRIRLHEAGRIAAALRKRGIGCSIAA--GIHPSDGQWELKHRAL 151
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
G+ + + + ++ Q S + IL+S AYHL R L +
Sbjct: 152 AAFFAPYGIAPERLIPIEGAANSRQEVIAFSQL-----PGCKILISEAYHLPRLMLLARK 206
Query: 195 FGINTKASCSD-----YLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ ++ + + + + +P + +F TE + EY+GI A+
Sbjct: 207 YRLDAIPAPAGNIEGPFGGSPLDFLPNAESFAHTERTVYEYLGIAEAFL 255
>gi|159486076|ref|XP_001701070.1| hypothetical protein CHLREDRAFT_187568 [Chlamydomonas reinhardtii]
gi|158281569|gb|EDP07324.1| predicted protein [Chlamydomonas reinhardtii]
Length = 246
Score = 74.9 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 66/181 (36%), Gaps = 24/181 (13%)
Query: 27 SCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
+ F L + L + L P++ P ++ ++LG T
Sbjct: 9 AAFGALLAVALSPAFLRWLHQTLGSR--GPVVLPDDTV-VDVAIVLGYALFRNGT----- 60
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL------- 139
P+ R+ E + LY + ++ + GG K +E+ V
Sbjct: 61 --PTEPLKGRVREGVELYMRGRARNLLFSGAHPGGVVMKR--SEANVMRECAEGVLRDSR 116
Query: 140 -----ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ + E QS T++NA FS + + +++ +V+S +H RS++ F+
Sbjct: 117 AGGGAQGLLAAQRWFEEDQSTSTWENAVFSLRICRQKGWRSVAVVTSPFHQIRSEMVFRR 176
Query: 195 F 195
Sbjct: 177 L 177
>gi|58039794|ref|YP_191758.1| hypothetical protein GOX1350 [Gluconobacter oxydans 621H]
gi|58002208|gb|AAW61102.1| Hypothetical protein GOX1350 [Gluconobacter oxydans 621H]
Length = 194
Score = 74.9 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 59/149 (39%), Gaps = 18/149 (12%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
++L T PA+R R+ E +RL+++ TI++SG +
Sbjct: 46 AVILGTAVTQNGEPRPALR--------ERLEEGLRLWRAGFVR----TIMVSGAIESGNH 93
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ + + L+ V I +++ +T+ A + + + ++V+ +H+ R
Sbjct: 94 QDEARIMADWLMARNVPASAIIVDSHGNNTWLTALHVARL----HPEGAVVVTQWFHVLR 149
Query: 188 SQLYFQHFGINTK--ASCSDYLNAYYSII 214
S+ + G+ A+ + +
Sbjct: 150 SEWSLRRAGVKPVSGAAPCRFRMVELWYL 178
>gi|111019419|ref|YP_702391.1| hypothetical protein RHA1_ro02428 [Rhodococcus jostii RHA1]
gi|110818949|gb|ABG94233.1| possible membrane protein [Rhodococcus jostii RHA1]
Length = 222
Score = 74.9 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 72/189 (38%), Gaps = 20/189 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ +R++ + + + + + + + + S + + ++++LG
Sbjct: 4 RRIVRRLVGIGAGLGALAVL--VVAASTVWISREASGH--VYDVDDAPEAPVVIVLGA-- 57
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ P + R+ +RL + + + +++SG D E +
Sbjct: 58 QVRDGKPREYL------AGRLDVAVRLVQDGRARA----VLVSG-DGAGRSGDEIAAMTD 106
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+E G++R+ I + LDT+ + ++ ++V+ +H+ R+ + G
Sbjct: 107 YLVEKGIDRNKIVGDRYGLDTYDT---CARAVQTYGVTKALIVTQGFHVPRAVALCRGAG 163
Query: 197 INTKASCSD 205
I+ +
Sbjct: 164 IDVAGVNAG 172
>gi|114705471|ref|ZP_01438379.1| hypothetical protein FP2506_11041 [Fulvimarina pelagi HTCC2506]
gi|114540256|gb|EAU43376.1| hypothetical protein FP2506_11041 [Fulvimarina pelagi HTCC2506]
Length = 234
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 87/235 (37%), Gaps = 42/235 (17%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ +L + ++ F + C ++L + G I L++ + + + + + IV+
Sbjct: 18 WAQMLRRGRKRRFAILCLVVLVAG---GFIVGSFLRYAETT--AAVSRLENVPPADAIVV 72
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
L G +RI + L K + ++ISG + A +
Sbjct: 73 LTGG------------------ANRIERAISLLK----NGYGKRLLISGVNENTSARAIA 110
Query: 132 IVYNNKL--LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
N L E V+ ++ +LDT NA + +ILV+S YH++RS
Sbjct: 111 RATNTDLDLFECCVD-----IDVAALDTVGNAMEAVRWAAENGFDELILVTSDYHMQRSL 165
Query: 190 LYFQHFG----INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ F G I A D L IP E+ + EY ++ A R
Sbjct: 166 IEFDRVGDLDRITPVAVRLDEL-WQDDTIPTRRGL---EVLVMEYAKLMAARVRA 216
>gi|300858936|ref|YP_003783919.1| hypothetical protein cpfrc_01519 [Corynebacterium
pseudotuberculosis FRC41]
gi|300686390|gb|ADK29312.1| hypothetical protein cpfrc_01519 [Corynebacterium
pseudotuberculosis FRC41]
gi|302331185|gb|ADL21379.1| Hypothetical protein Cp1002_1509 [Corynebacterium
pseudotuberculosis 1002]
Length = 258
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 22/167 (13%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG PS Q +R+ +++ + +I GG
Sbjct: 68 IVVLG--------TAQYDGVPSRQFAARLRWAADQWQTARVQ----KVITVGGKLPGDRF 115
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ V LL++ V+ D + DT+ + ++ +++V+ H RS
Sbjct: 116 TEAQVGREYLLKAHVDSDLVLEVPHGNDTWSSLNAVKEVVTE----PVLIVTDPNHALRS 171
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+L + GI AS + Y + S +++T L E+ G+L+
Sbjct: 172 ELIARLQGIKAVASSTPYSPTRFP----SKAWWIT--FLHEHGGLLV 212
>gi|189425340|ref|YP_001952517.1| hypothetical protein Glov_2281 [Geobacter lovleyi SZ]
gi|189421599|gb|ACD95997.1| protein of unknown function DUF218 [Geobacter lovleyi SZ]
Length = 198
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 66/167 (39%), Gaps = 31/167 (18%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
F+Y+ P+ + + IV+L G R+ E +RL++ +
Sbjct: 25 FTYKTFSARPR-QVQADAIVVLAGGK------------------GRVEEGVRLFRERRGT 65
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ + + +S +Y K D++ LE S +T +NA + ++
Sbjct: 66 WLFLVGV-------DPTVRKSDLYRPK--PGDPPADNVVLEKLSRNTLENAIYGRDILAE 116
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHF---GINTKASCSDYLNAYYSII 214
+ ++++L++S YHLKRS + F++ + D N
Sbjct: 117 HKVRSVLLITSRYHLKRSAILFRNALAPDVALYPYPVDSSNVKEEWW 163
>gi|332293547|ref|YP_004432156.1| protein of unknown function DUF218 [Krokinobacter diaphorus
4H-3-7-5]
gi|332171633|gb|AEE20888.1| protein of unknown function DUF218 [Krokinobacter diaphorus
4H-3-7-5]
Length = 222
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 66/191 (34%), Gaps = 18/191 (9%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +KI ++ ++ G + + + + + + +++LG
Sbjct: 3 KHFKKIIAVTLVGIILLICGVYALSYHVE---ESTKSQTFTNISQVPKAYTVIVLGASVR 59
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ S R+ + LYK K ++SG + E
Sbjct: 60 ANGNL-------STMLEDRVSSALSLYKEGKVK----RFLLSGDNGTAS-YNEPKAMKAY 107
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L++ GV DDI L+ DT+ + +SS+ K ++V+ +HL R+ G+
Sbjct: 108 LMDKGVPEDDIFLDYAGFDTYDSMYRASSV---FNVKEAVVVTQEFHLPRALYIANQLGL 164
Query: 198 NTKASCSDYLN 208
D
Sbjct: 165 TYYGFVGDQRT 175
>gi|159044137|ref|YP_001532931.1| hypothetical protein Dshi_1588 [Dinoroseobacter shibae DFL 12]
gi|157911897|gb|ABV93330.1| hypothetical protein Dshi_1588 [Dinoroseobacter shibae DFL 12]
Length = 213
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
L P + + IV+L +G T+ S Q+ +R + +++ +
Sbjct: 31 LYEPPARSEYAAIVVLSHGVAADGTL-------SPQTAARTQAGLDAFEA----GYAPKV 79
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I SGG ++ + + +G+ + +E +S T QNA F++ ++ ++ + +
Sbjct: 80 IFSGGLGGLEPASKGALMAEAAIAAGLPAEVAMVEGESHSTLQNALFTARLVPELRDQPV 139
Query: 177 ILVSSAYHLKRSQLYFQHFGIN 198
+LV+ YH RS F G
Sbjct: 140 LLVTHRYHGMRSIASFWWAGFR 161
>gi|262165865|ref|ZP_06033602.1| hypothetical protein VMA_002314 [Vibrio mimicus VM223]
gi|262025581|gb|EEY44249.1| hypothetical protein VMA_002314 [Vibrio mimicus VM223]
Length = 214
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 27/141 (19%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + ++I++LG+ + +LY + ++ SG
Sbjct: 20 QQPESADVILVLGSNDVRVAE-----------------HAAKLYHQ----GIAPCVLFSG 58
Query: 121 GDPQ-KHGL---AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGK 174
G + G+ E+ + E+GV I LETQS ++ +N +FS ++ K K
Sbjct: 59 GLGRFTQGVFQHTEAETFAAIAKEAGVPEQAILLETQSTNSGENVRFSHQLLTQKAQPIK 118
Query: 175 NIILVSSAYHLKRSQLYFQHF 195
I+LV Y +R+ F
Sbjct: 119 RILLVQKPYMERRAYATFMKQ 139
>gi|318040918|ref|ZP_07972874.1| hypothetical protein SCB01_04389 [Synechococcus sp. CB0101]
Length = 183
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 41/210 (19%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
+S IG + T + + SP + V+LG G A
Sbjct: 13 YSPIGTTALTTWM----EEQIPTSTSSPGPLHPPAVAVVLGRG-----PQIAAASTRLAA 63
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
+ R + +Y +SG ++ L GV D I ++
Sbjct: 64 ALLRDQDAAAVY-------------VSG---------DATSTAEALERQGVASDQIAGDS 101
Query: 153 QSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
+ T++NA +++ ++ ++L++ + L R+ F+ G+ + +
Sbjct: 102 CARTTWENATHTAAWLRIHHPLAPVLLITDPWQLPRATAAFRRQGLEVQPMAIN------ 155
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYRGN 241
P LAL+E + +G
Sbjct: 156 ---PHLTARQRNRLALRETAATWLYRLQGR 182
>gi|323435882|ref|ZP_01048691.2| conserved hypothetical protein [Dokdonia donghaensis MED134]
gi|321496197|gb|EAQ39925.2| conserved hypothetical protein [Dokdonia donghaensis MED134]
Length = 207
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 15/142 (10%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+++LG + S R+ + LY++ K ++SG +
Sbjct: 31 PQAYTVIVLGASVRSNGDL-------STMLEDRVSSALSLYRAGKVS----RFLLSGDNG 79
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
K E L+ GV +DI L+ DT+ + +SS+ K I+V+ +
Sbjct: 80 TKS-YNEPKAMQQYLINQGVPEEDIFLDYAGFDTYDSMYRASSV---FNVKEAIVVTQKF 135
Query: 184 HLKRSQLYFQHFGINTKASCSD 205
HL R+ G++ D
Sbjct: 136 HLPRALFIANRLGLDYYGFIGD 157
>gi|258627444|ref|ZP_05722225.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258580250|gb|EEW05218.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 214
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 27/141 (19%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + ++I++LG+ + +LY + ++ SG
Sbjct: 20 QQPESADVILVLGSNDVRVAE-----------------HAAKLYHQ----GIAPCVLFSG 58
Query: 121 GDPQ-KHGL---AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGK 174
G + G+ E+ + E+GV I LETQS ++ +N +FS ++ K K
Sbjct: 59 GLGRFTQGVFQHTEAETFAAIAKEAGVPEQAILLETQSTNSGENVRFSHQLLTQKAQPIK 118
Query: 175 NIILVSSAYHLKRSQLYFQHF 195
I+LV Y +R+ F
Sbjct: 119 RILLVQKPYMERRAYATFMKQ 139
>gi|328473116|gb|EGF43964.1| hypothetical protein VP10329_20580 [Vibrio parahaemolyticus 10329]
Length = 212
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKLETQ 153
+ + I+ SGG+ + +E+ + + +GVE + I LET+
Sbjct: 34 VRVAEHAAALYHQKLAPLIVFSGGEGRFTDGLFEKSEAETFADIARLAGVESNAILLETR 93
Query: 154 SLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHF 195
S ++ +N +F+ ++K + +IILV + +R+ F+
Sbjct: 94 STNSGENVRFTEQLLKEKGIQCESIILVQKPFMERRAIATFEKQ 137
>gi|160916149|ref|ZP_02078356.1| hypothetical protein EUBDOL_02176 [Eubacterium dolichum DSM 3991]
gi|158431873|gb|EDP10162.1| hypothetical protein EUBDOL_02176 [Eubacterium dolichum DSM 3991]
Length = 441
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 21/148 (14%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + ++LG T+ + R+ + + Q + ++++GG
Sbjct: 97 PNDNSHAFIVLGFALNSDGTMKP-------ELIGRLETAL----ASAQKYPNSYVLVTGG 145
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILVS 180
+K+G E ++ L+E GV + I +ET++ DT NAQ S ++ NM K I +++
Sbjct: 146 -VEKNGWTEGQRMHDWLVEHGVAEERILVETEAADTAGNAQNSFKILYNMPNIKTISMIT 204
Query: 181 SAYHLKR--------SQLYFQHFGINTK 200
S YHLKR S L + G
Sbjct: 205 SQYHLKRGTILYYAQSLLSAKELGKTPI 232
>gi|328865384|gb|EGG13770.1| hypothetical protein DFA_11531 [Dictyostelium fasciculatum]
Length = 586
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 16/134 (11%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG PS R+ + Y K++ II+ G + +
Sbjct: 169 IVILGYTLHKD-------GMPSRILKERVELAVETYSRLKENDNLNPIIVLSGKSKPNDF 221
Query: 129 --------AESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
E+ + + ++ DI ++ ++ +T +NA + +M+ I++
Sbjct: 222 DETEAEYKTEADAMRDIITTTYDIDERDIYMDLRATNTAENANNTLTMMLAKNIVRCIII 281
Query: 180 SSAYHLKRSQLYFQ 193
+S +HL RSQ FQ
Sbjct: 282 TSDFHLLRSQYTFQ 295
>gi|261252482|ref|ZP_05945055.1| hypothetical protein VIA_002504 [Vibrio orientalis CIP 102891]
gi|260935873|gb|EEX91862.1| hypothetical protein VIA_002504 [Vibrio orientalis CIP 102891]
Length = 211
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 56/157 (35%), Gaps = 28/157 (17%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY 104
L +H++ + L Q +K + I +LG+ + LY
Sbjct: 6 LYQHIEHLWDYMQLGHQLEKS-DCIFVLGSNDIRVAE-----------------HAANLY 47
Query: 105 KSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
+I SGG + +E+ + GV I +E Q+ +T +N
Sbjct: 48 LQGWADW----LIFSGGVGRLTQGTFETSEAETFAAIAQTMGVPHHAIIIENQATNTGEN 103
Query: 161 AQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHF 195
+F+ ++K + ILV Y +R+ F+
Sbjct: 104 VRFTHQLLKERSIDVSSFILVQKPYMERRTLATFEKQ 140
>gi|296138203|ref|YP_003645446.1| hypothetical protein Tpau_0466 [Tsukamurella paurometabola DSM
20162]
gi|296026337|gb|ADG77107.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 183
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 63/175 (36%), Gaps = 19/175 (10%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
PL SP + + G P R+ +RLY+ K
Sbjct: 19 PLYSPDDAPPAPVAIAFGA--------SVRGGRPGSFVEGRLEAALRLYRIGKVQ----R 66
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
I++SG + E V L E GV + + + +LDT+ + +
Sbjct: 67 ILVSG-NANGLSGDEIEVMTRWLRERGVPDEALLTDGAALDTYLSCVHARD---RFGIDR 122
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDY---LNAYYSIIPLSANFYLTELAL 227
++LVS +H +R+ + +H G++ A ++ A+ + + AL
Sbjct: 123 VLLVSQFFHARRAVVLARHLGLDADAVRAEAGCSRRAWVRNLAREYLLSRPKAAL 177
>gi|322433354|ref|YP_004210571.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
gi|321165743|gb|ADW71444.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
Length = 199
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 76/214 (35%), Gaps = 25/214 (11%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
F L+F+ + ++ + SY + + I+++G T T+ ++
Sbjct: 4 FWLVFAVVVC------IMTGMAISYLTVPKENGQLESFDAIIVIGCPTADDGTLSPMQK- 56
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
+R+ E ++ + + K +I SGG H + ES V E GV + +
Sbjct: 57 ------ARVLEGVKEFSAGKAKH----LIFSGGASNNHSI-ESQVMAQAAAEMGVPNEAV 105
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
L+ ++ +T N FS ++ + ++SS HL R G+ +
Sbjct: 106 FLDQEANNTLGNIFFSHLIMTGKGWNSAEVISSQNHLPR-------LGVILALYNFSWQT 158
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
P +E + + G R
Sbjct: 159 HAAPWPPNINPLIKFLYYGREVAATTVVRWFGFR 192
>gi|297194511|ref|ZP_06911909.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
gi|297152286|gb|EFH31635.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 219
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 65/190 (34%), Gaps = 21/190 (11%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + R+ ++ ++L +G T + + +P ++ V+ G
Sbjct: 1 MSVRGTRRRRLVAQAVMLGCVLGLAP-TTWMHAVADSRVRTVAEAPAR----DVAVVFGA 55
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + PS R+ LY++ K +++ GD + E
Sbjct: 56 GL--------WKGRPSPYLAHRLDTAAELYRTGKV-----KVVLVTGDNSRVEYDEPDAM 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L GV D I + DT+ + + + + +LVS +H++R+ +
Sbjct: 103 RTYLTGRGVPDDRIVSDYAGFDTWDSCVRAKEI---FGVERALLVSQGFHIRRAVALCRS 159
Query: 195 FGINTKASCS 204
G+
Sbjct: 160 AGVEAYGVGV 169
>gi|261364900|ref|ZP_05977783.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996]
gi|288566949|gb|EFC88509.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996]
Length = 115
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
+SGG G E+ + +E GV + I+LE S T++N S +++ II
Sbjct: 1 MSGGT-DGDGSNEAQTMRDMAVEMGVPSEKIRLEEHSESTYENIVLSVPKLRDAN--EII 57
Query: 178 LVSSAYHLKRSQLYFQH--FGINTKASCSD 205
+VS A+HL R+ + G + S
Sbjct: 58 IVSDAFHLARASWLAKRYWQGKTVELYASG 87
>gi|325066422|ref|ZP_08125095.1| hypothetical protein AoriK_01317 [Actinomyces oris K20]
Length = 117
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 13/105 (12%)
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ GV + I LE +S T N ++ ++ ++LV+S++H R+ +
Sbjct: 1 YAIARGVPPERILLEDRSTTTRTNISYTRDLLAERGMADPQVLLVTSSFHAVRTAILASD 60
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
G+ + + +A FY+ L+EY+ +L R
Sbjct: 61 MGVPWAVAPA-----------RTAWFYIVNAWLREYVAVLTYRRR 94
>gi|262171294|ref|ZP_06038972.1| hypothetical protein VII_002110 [Vibrio mimicus MB-451]
gi|261892370|gb|EEY38356.1| hypothetical protein VII_002110 [Vibrio mimicus MB-451]
Length = 214
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 56/141 (39%), Gaps = 27/141 (19%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + ++I++LG+ + +LY + ++ SG
Sbjct: 20 QQPESADVILVLGSNDVRVAE-----------------HAAKLYHQ----GIAPCVLFSG 58
Query: 121 GDPQ-KHGL---AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGK 174
G + G+ E+ + E+GV I LET+S ++ +N +FS ++ K K
Sbjct: 59 GLGRFTQGVFQHTEAETFAAIAKEAGVPEQAILLETKSTNSGENVRFSHQLLTQKAQPIK 118
Query: 175 NIILVSSAYHLKRSQLYFQHF 195
I+LV Y +R+ F
Sbjct: 119 RILLVQKPYMERRAYATFMKQ 139
>gi|258621860|ref|ZP_05716890.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258585798|gb|EEW10517.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 214
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 56/141 (39%), Gaps = 27/141 (19%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + ++I++LG+ + +LY + ++ SG
Sbjct: 20 QQPESADVILVLGSNDVRVAE-----------------HAAKLYHQ----GIAPCVLFSG 58
Query: 121 GDPQ-KHGL---AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGK 174
G + G+ E+ + E+GV I LET+S ++ +N +FS ++ K K
Sbjct: 59 GLGRFTQGVFQHTEAETFAAIAKEAGVPEQAILLETKSTNSGENVRFSHQLLTQKAQPIK 118
Query: 175 NIILVSSAYHLKRSQLYFQHF 195
I+LV Y +R+ F
Sbjct: 119 RILLVQKPYMERRAYATFMKQ 139
>gi|329934704|ref|ZP_08284745.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329305526|gb|EGG49382.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 254
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 16/171 (9%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+ +G ++ L + L +P ++ V+ G G EPS
Sbjct: 45 AVMGLCVLALSPAAWLFTTTGGQLRTPDTVPRTDVAVVFGAGLWD--------GEPSPYL 96
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
R+ LY + + +++ GD + E L E GV D + +
Sbjct: 97 AHRLDTAAGLYHAGRVR-----VVLVTGDNSRDDYDEPDAMRAYLTEHGVPGDRVVEDYA 151
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
DT+ + + + +L+S +H++R+ + G+ + +
Sbjct: 152 GFDTWDSCVRARKI---FGVDRAVLISQGFHIRRAVALCRAAGVESYGVAA 199
>gi|108762577|ref|YP_635041.1| putative SanA protein [Myxococcus xanthus DK 1622]
gi|108466457|gb|ABF91642.1| putative SanA protein [Myxococcus xanthus DK 1622]
Length = 225
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 19/156 (12%)
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
SYQ ++ + + ++ G G A PS R+ + L++ K
Sbjct: 45 SYQDRIVPLEQAPQAPVALVFGAGL-------ARGAVPSPVLAQRLDAAIALWQQGKVQ- 96
Query: 112 MHCTIIISGGD--PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
T+++SG P H E+ L+E GV I + L T+ + ++++
Sbjct: 97 ---TVLVSGDQTKPFHH---ETRAMRRYLVEHGVPESAILGDEAGLSTYDSCLRAATV-- 148
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K +LV+ +HL R+ GI+ +D
Sbjct: 149 -FGAKRAVLVTQRFHLTRALFIANSVGIDAWGVAAD 183
>gi|325283041|ref|YP_004255582.1| hypothetical protein Deipr_0809 [Deinococcus proteolyticus MRP]
gi|324314850|gb|ADY25965.1| protein of unknown function DUF218 [Deinococcus proteolyticus MRP]
Length = 265
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/216 (14%), Positives = 64/216 (29%), Gaps = 18/216 (8%)
Query: 30 MLLFSFIGWGII--PTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
L++ +G + L L L Q + I++LG G +
Sbjct: 59 AALWAGLGTVALLYGAALFTPLVPRALTALTEAQAPAPADAIIVLGGGLSCAEG------ 112
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY----NNKLLESGV 143
S +R+ L+++ T++ S E +L
Sbjct: 113 SLEPASAARLSRGTDLWRA----GYADTLVFSS-QSDALTPPECPRMSDLQAAQLRRWFD 167
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH-FGINTKAS 202
I DT A+ ++ + + ++LV+S H R+ F+ +
Sbjct: 168 RPPRILTLRGVTDTADEARQAARLEAEYGWRRVLLVTSPSHSARAAALFRRELSAEVLSV 227
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ S + + L E + + A
Sbjct: 228 PAEEWRFSLSGETAQSRLAGLNVVLYEALSRVKARL 263
>gi|110597465|ref|ZP_01385752.1| Protein of unknown function DUF218 [Chlorobium ferrooxidans DSM
13031]
gi|110341009|gb|EAT59480.1| Protein of unknown function DUF218 [Chlorobium ferrooxidans DSM
13031]
Length = 196
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 64/166 (38%), Gaps = 27/166 (16%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K+F L S G + L L Y + ++I++LG
Sbjct: 2 KLFLKLTLFALLSVCGAASAIFLTLGFLVSLYAG------NPEKTDVIIVLGG------- 48
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
S R+ + LY +I++G D + + A ++++
Sbjct: 49 ----------DSGLRVRKGAELY----NSGYASHVILTGIDERFYRPAHPNWRERRMIKL 94
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
GV + I+++TQS T++ A ++ ++ K+ I+VS H+ R
Sbjct: 95 GVPKKAIRVDTQSTTTWEEAVNAADTMEKKGWKSAIVVSDPPHMLR 140
>gi|148265185|ref|YP_001231891.1| hypothetical protein Gura_3157 [Geobacter uraniireducens Rf4]
gi|146398685|gb|ABQ27318.1| protein of unknown function DUF218 [Geobacter uraniireducens Rf4]
Length = 199
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 75/201 (37%), Gaps = 34/201 (16%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK-KDGNIIVLLGNGTTIIPTIPA 84
M+ F +FS + +I +++ L + S + + + IV+L G
Sbjct: 1 MAFFRGIFSLL---VISLVVIAVLFVDFTYKTFSLRQRDVKSDAIVVLAGGR-------- 49
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
RI E +RLY+ + + + + + ++ + E
Sbjct: 50 ----------GRIEEGVRLYRENRARWLFLIGV-------DPAVRKGELFTERRGERS-- 90
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF---GINTKA 201
+ + LE S +T +NA ++ MI +I L++S YH+KR+ L F+ I
Sbjct: 91 GEGVFLENVSRNTLENALYAREMIVRHNVSSIKLITSRYHMKRATLIFRQVLPKDIAIYP 150
Query: 202 SCSDYLNAYYSIIPLSANFYL 222
D N +F L
Sbjct: 151 HPVDSKNLKEEWWSHGGSFRL 171
>gi|298207824|ref|YP_003716003.1| hypothetical protein CA2559_06205 [Croceibacter atlanticus
HTCC2559]
gi|83850462|gb|EAP88330.1| hypothetical protein CA2559_06205 [Croceibacter atlanticus
HTCC2559]
Length = 219
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 59/170 (34%), Gaps = 25/170 (14%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+++LG + S R+ LYKS K ++SG Q +
Sbjct: 50 VIVLGASVYANGNL-------SPILKDRVDTAYELYKSGKAQ----RFLLSGDHGQDN-Y 97
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E + L GV + I L+ DT+ + + + K + I+V+ +HL R+
Sbjct: 98 DEVNAMKDYLNAKGVPDEVIFLDHAGFDTYDSMYRAKYIFK---VDSAIVVTQQFHLPRA 154
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+N K +D E +E I + AY+
Sbjct: 155 LYIANALNLNYKGVTADKRT--------YQYLESLER--REKIANIKAYW 194
>gi|302206636|gb|ADL10978.1| Putative secreted protein [Corynebacterium pseudotuberculosis C231]
Length = 258
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 22/167 (13%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG PS Q +R+ +++ + +I GG
Sbjct: 68 IVVLG--------TAQYDGVPSRQFAARLRWAADQWQTARVQ----KVITVGGKLPGDRF 115
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ V LL++ V+ D + DT+ + ++ +++V+ H RS
Sbjct: 116 TEAQVGREYLLKAHVDSDLVLEVPHGNDTWSSLNAVKEVVTG----PVLIVTDPNHALRS 171
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+L + GI AS + Y + S +++T L E+ G+L+
Sbjct: 172 ELIARLQGIKAVASSTPYSPTRFP----SKAWWIT--FLHEHGGLLV 212
>gi|254360531|ref|ZP_04976680.1| hypothetical protein MHA_0080 [Mannheimia haemolytica PHL213]
gi|153091071|gb|EDN73076.1| hypothetical protein MHA_0080 [Mannheimia haemolytica PHL213]
Length = 715
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 12/130 (9%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
PQ + I + G P PS R+ +T K + + II+S
Sbjct: 198 PQTTMIPDTIAVFG-------QSPNPDGTPSKGLLQRLEKT----KEMAEKFPNAKIILS 246
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG P ++ AE+ V L+E+GV+ + L+ + DT NA +K G+ ++ +
Sbjct: 247 GG-PVRYIYAEADVMKKWLIENGVDESRLLLDDVARDTPGNAVGIIDFMKEYGGRKVLGI 305
Query: 180 SSAYHLKRSQ 189
+ HL R+
Sbjct: 306 GTILHLPRAM 315
>gi|120436534|ref|YP_862220.1| secreted protein containing DUF218 [Gramella forsetii KT0803]
gi|117578684|emb|CAL67153.1| secreted protein containing DUF218 [Gramella forsetii KT0803]
Length = 209
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 71/190 (37%), Gaps = 21/190 (11%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ I + +++F +G I L ++ + +++LG
Sbjct: 5 KKIILASVIGLVLVIFVILGIEAIFQRQTTGLIYTNMSNV------PPAKTVIILGASVH 58
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ S R+ +RLYK+ K + T GD + E
Sbjct: 59 AD-------GKLSPILQDRVDTAIRLYKNDKVSNFLVT-----GDHRSDDYNEVAAMVGY 106
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L E G+++ I + LDT+ + + + + +N I+V+ +HL R+ ++ G+
Sbjct: 107 LEEKGIDKKLIISDHAGLDTYDSMYRAGKLFE---VENAIVVTQKFHLPRTLFIAKNLGL 163
Query: 198 NTKASCSDYL 207
+ + +D
Sbjct: 164 DYRGFAADQR 173
>gi|262404114|ref|ZP_06080669.1| hypothetical protein VOA_002104 [Vibrio sp. RC586]
gi|262349146|gb|EEY98284.1| hypothetical protein VOA_002104 [Vibrio sp. RC586]
Length = 215
Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 60/158 (37%), Gaps = 35/158 (22%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
IL +LQ Q + ++I++LG+ + +L
Sbjct: 11 ILWHYLQL--------HQQPEPADVILVLGSNDVRVAE-----------------HAAKL 45
Query: 104 YKSCKQHSMHCTIIISGGDPQ-KHGL---AESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
Y + ++ SGG + G+ E+ ++ E+GV I LETQS ++ +
Sbjct: 46 YHQ----GIAPRVLFSGGLGRFTQGVFQQTEAEIFAALAKEAGVPEKAILLETQSTNSGE 101
Query: 160 NAQFSSSMIKN--MQGKNIILVSSAYHLKRSQLYFQHF 195
N FS ++ + I+LV Y +R+ F
Sbjct: 102 NILFSHHLLAQQAQPIQRILLVQKPYMERRAYATFMKQ 139
>gi|300788436|ref|YP_003768727.1| hypothetical protein AMED_6599 [Amycolatopsis mediterranei U32]
gi|299797950|gb|ADJ48325.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length = 217
Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 60/174 (34%), Gaps = 18/174 (10%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
++IV+LG +PS +R+ + +LY + TI+ +GG
Sbjct: 48 PADVIVVLGA--------AQYNGKPSDIYAARLVKAKQLY----DAGIAKTIVTAGGKKA 95
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E+ L GV + DT ++ + + ++ + +LVS +H
Sbjct: 96 EDNFTEARAGQLWLTRRGVPASATLAVGEGSDTLRSLRAVAQQVEARGWRTAVLVSDPWH 155
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
R++ G++ + + + ++E +L
Sbjct: 156 SFRARTMAGDLGLDAWTAPTHSGPIVQERVTQVRYI------VRETGALLYYRL 203
>gi|37679548|ref|NP_934157.1| hypothetical protein VV1364 [Vibrio vulnificus YJ016]
gi|37198292|dbj|BAC94128.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 212
Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQ-KHGL---AESIVYNNKLLESGVERDDIKLETQS 154
LYK I+ SGG+ + GL +E+ + SGV + I LET+S
Sbjct: 39 HAANLYKQ----GYAPYILFSGGEGRFTEGLFEKSEAETFAELAKASGVPAEAILLETKS 94
Query: 155 LDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
+T +N +FS ++ K + ++ ILV + +R+ F+
Sbjct: 95 SNTGENVRFSEQLLLEKGLAFESFILVQKPFMERRALATFEKQ 137
>gi|325001625|ref|ZP_08122737.1| hypothetical protein PseP1_22816 [Pseudonocardia sp. P1]
Length = 228
Score = 73.4 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 55/144 (38%), Gaps = 12/144 (8%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ + +++LG EPS +R+ LY+ + I+ G
Sbjct: 56 DDQRPVDAVIVLGA--------AQYNGEPSAVLAARLRHAEDLYRD----GVAPRIVTVG 103
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ L+E G+ ++ + +DT + Q + + ++ +LVS
Sbjct: 104 GGQSGDRYTEAEASREWLIEQGLPSTAVEAVPEGVDTLGSLQAVAGTAREQGWESALLVS 163
Query: 181 SAYHLKRSQLYFQHFGINTKASCS 204
+H R++ + G+ S +
Sbjct: 164 DPWHSLRARTMARDAGLEAWTSPT 187
>gi|328952863|ref|YP_004370197.1| protein of unknown function DUF218 [Desulfobacca acetoxidans DSM
11109]
gi|328453187|gb|AEB09016.1| protein of unknown function DUF218 [Desulfobacca acetoxidans DSM
11109]
Length = 202
Score = 73.4 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 59/191 (30%), Gaps = 32/191 (16%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ I+++G + P + R+ + L + ++I+GG
Sbjct: 20 DAIIIVGA-------LVGRDGHPGRVARFRLHHALPL---VVETYPESWVVITGGLWPGR 69
Query: 127 GLAESIVYNNKLLESGVE----------RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
E+ + L V + LE SL T ++A+ ++ +++
Sbjct: 70 PATEARAMADWALGQAVRHWGEACGRKLEQRLILEEVSLSTVESARHTAVLLQQRGLMAA 129
Query: 177 ILVSSAYHLKRSQLYF------QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
LV+ H+ R+ F + I + LT+ L+E
Sbjct: 130 GLVTDELHMPRAAYLFRRSFRARRLTIRLLPA----RGLLVDYWQRRRYVRLTKFILRE- 184
Query: 231 IGILIAYYRGN 241
G G
Sbjct: 185 -GGAWMKLWGR 194
>gi|261492343|ref|ZP_05988905.1| hypothetical protein COK_0773 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496129|ref|ZP_05992537.1| hypothetical protein COI_1870 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308231|gb|EEY09526.1| hypothetical protein COI_1870 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261312026|gb|EEY13167.1| hypothetical protein COK_0773 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 715
Score = 73.4 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 12/130 (9%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
PQ + I + G P PS R+ +T K + II+S
Sbjct: 198 PQTTMIPDTIAVFG-------QSPNPDGTPSKGLLQRLEKT----KEMAAKFPNAKIILS 246
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG P ++ AE+ V L+E+GV+ + L+ + DT NA +K G+ ++ +
Sbjct: 247 GG-PVRYIYAEADVMKKWLIENGVDESRLLLDDVARDTPGNAVGIIDFMKEYGGRKVLGI 305
Query: 180 SSAYHLKRSQ 189
+ HL R+
Sbjct: 306 GTILHLPRAM 315
>gi|332992233|gb|AEF02288.1| hypothetical protein ambt_03690 [Alteromonas sp. SN2]
Length = 250
Score = 73.4 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/245 (17%), Positives = 86/245 (35%), Gaps = 26/245 (10%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLL-FSFIGWGIIPTILLKHLQFSY---QRPLLSPQW 62
F W L + M L + +I+L L+F + L +P++
Sbjct: 22 FSAAGLWLLYSSKLNSAKLMISITFLSLVIFSQSWVSSIILYPLEFGFTDESEQLETPEF 81
Query: 63 -KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
++P I S R+ + L + + II++GG
Sbjct: 82 IWTPACY-------YATNGSVPEISRWNEC-SLQRLLQAKILSEQHQI-----PIILTGG 128
Query: 122 D-PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ + +I L+ G+ D I + + TF +++ ++ I+ V+
Sbjct: 129 NFLLDETVNYAIKAQELLISLGMSADGIVILNEGTSTFTEI---NALKRSFADVKILAVT 185
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNA----YYSIIPLSANFYLTELALKEYIGILIA 236
SA H KR + I K D+ ++ + +P +++ A EY+ +L
Sbjct: 186 SATHQKRVAIMLADANIQAKVKGVDFKSSGELKPFVTMPSASSLDNIRKAFYEYMALLKY 245
Query: 237 YYRGN 241
GN
Sbjct: 246 LIFGN 250
>gi|326803127|ref|YP_004320945.1| hypothetical protein HMPREF9243_0621 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651604|gb|AEA01787.1| conserved hypothetical protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 190
Score = 73.4 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
P + + I + R + ++L K+ + I+S P+ + E ++
Sbjct: 31 APQVSDLIIVAEGPAVERAEKAVQLLKAAYSRAE--KNIVS---PRYTDVGE-DLFAGY- 83
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ G ER+++ E Q+ T+ NA S ++ ++ + I+V+S YH++R++L FQ +
Sbjct: 84 QQLGAERENLIEENQATSTWTNATTSLDLMDDLGYHSAIVVTSDYHMRRTRLAFQRANRD 143
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKE---YIG 232
Y++AYY P + Y ++AL+E YIG
Sbjct: 144 -YGFQLTYVSAYYQGQPYPKHPYTQKMALQELYKYIG 179
>gi|330470019|ref|YP_004407762.1| hypothetical protein VAB18032_00390 [Verrucosispora maris
AB-18-032]
gi|328812990|gb|AEB47162.1| hypothetical protein VAB18032_00390 [Verrucosispora maris
AB-18-032]
Length = 242
Score = 73.4 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 62/187 (33%), Gaps = 19/187 (10%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ +R+ L + + + + P V L GT
Sbjct: 23 GRWLRRAVLAGAVGALLLVVASWASVSWIRSGAEGRMHTAQTVPDTP------VALVLGT 76
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ P P+ +R+ LY + K + I++SG D E
Sbjct: 77 RVQPD-----GTPAPFLTARLEIARELYATGKVQA----ILVSG-DNMNADYNEPEAMQR 126
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+E GV D + L+ DT+ + + + + +V+ +HL R+ +H G
Sbjct: 127 WLVEHGVPADKVVLDYAGFDTYDSCARAKRI---FGVERATVVTQQFHLARAVTVCRHLG 183
Query: 197 INTKASC 203
++
Sbjct: 184 VDAIGVG 190
>gi|226229327|ref|YP_002763433.1| hypothetical protein GAU_3921 [Gemmatimonas aurantiaca T-27]
gi|226092518|dbj|BAH40963.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 231
Score = 73.4 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/231 (15%), Positives = 81/231 (35%), Gaps = 44/231 (19%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
I ++ + + + + IV+LG PS
Sbjct: 12 LIASMLVGAFMAWLVCLGAIVYWSRGSDEGTADAIVVLGA--------AQYGGRPSPVLK 63
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
+R+ + L+++ + ++++GG ++E+ L GV ++LE
Sbjct: 64 ARLDHALGLWRTER----APWVVLTGGRRPGDLISEAAAGRRYLARRGVPNQIVRLEQTG 119
Query: 155 LDTFQNAQFSSSMIKNMQG--------------------KNIILVSSAYHLKRSQLYFQH 194
+ + Q +S+++ ++ ++LVS +H+ R L +
Sbjct: 120 RTSLASMQGASALLHALRDSLDAVARSGAKSSRSPLAARPRVLLVSDPFHMLRLDLLARL 179
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI-----LIAYYRG 240
G+ S + P+SAN + E ++E I + L+ + +
Sbjct: 180 HGLQPMTSPT-------RTSPISANRAVLEYMVRESIALPTDVALMFWLKA 223
>gi|284038771|ref|YP_003388701.1| hypothetical protein Slin_3912 [Spirosoma linguale DSM 74]
gi|283818064|gb|ADB39902.1| protein of unknown function DUF218 [Spirosoma linguale DSM 74]
Length = 222
Score = 73.4 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 58/155 (37%), Gaps = 11/155 (7%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFE-TMRLYKSCKQHSMHCTIIISGGDPQKH----GLAE 130
T P A I R+ E L+ +I SGG E
Sbjct: 20 HTNHPLTKADAILVLCSHDLRVAERGAELFLEGW----APLLIFSGGLGVITRFMWTEPE 75
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRS 188
+ ++ + GV + I +E +S +T +N QF+ ++ + ++ I+V Y +RS
Sbjct: 76 ADMFARIAQDMGVPAEHILIENRSSNTGENVQFTRQLLAERKLEIDKFIVVQKPYMERRS 135
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLT 223
F+ + + +++ + +N LT
Sbjct: 136 FATFRKVWPEKQVIVTSPQDSFDDYLSTYSNPELT 170
>gi|15805246|ref|NP_293934.1| hypothetical protein DR_0210 [Deinococcus radiodurans R1]
gi|6457880|gb|AAF09796.1|AE001883_2 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 278
Score = 73.0 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 61/174 (35%), Gaps = 16/174 (9%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII-- 118
Q + IV+LG G + S +R+ +RL+++ +I
Sbjct: 101 QPPVKADAIVVLGGGVNCGAA------QLESSSVARLLGGLRLWQAGY-----APVITVS 149
Query: 119 --SGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
SG + S++ + E G ++ T AQ S + + +
Sbjct: 150 EQSGLIGPHNCPKMSVLERELVRELYGAGGPEVLTLPHVTTTRDEAQRVSVLARERGWRR 209
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
++LV+S H +R+ F +G+ + + S+ S + L E
Sbjct: 210 VLLVTSPSHSRRAAALFAGYGVPVVSVPTFESRYDQSLQTPSDRLFALRTLLYE 263
>gi|224541249|ref|ZP_03681788.1| hypothetical protein CATMIT_00409 [Catenibacterium mitsuokai DSM
15897]
gi|224525894|gb|EEF94999.1| hypothetical protein CATMIT_00409 [Catenibacterium mitsuokai DSM
15897]
Length = 405
Score = 73.0 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG- 127
+V+LG T+ + R+ + + K + ++++GG K+
Sbjct: 105 VVILGFALNDDGTMKE-------ELVGRLQTGLAIAKEYPKSY----VVVTGGGTAKNNP 153
Query: 128 -LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYH 184
+ E + LL+ G+E + +E ++ DT NA+ + ++K KN++LV+S YH
Sbjct: 154 NVTEGGLMGEWLLKQGLEPSRLIVENRAQDTVGNAKNTYEVLKTKYPSVKNVVLVTSDYH 213
Query: 185 LKR 187
+ R
Sbjct: 214 VTR 216
>gi|222149964|ref|YP_002550921.1| hypothetical protein Avi_4029 [Agrobacterium vitis S4]
gi|221736946|gb|ACM37909.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 246
Score = 73.0 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 83/228 (36%), Gaps = 45/228 (19%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+R++ + +L ++ ++ L F+ + P + + IV+L G
Sbjct: 33 PLRRLLRYGGYAILL------LMACLVAGFLHFADDVTAMMPPAEPKADAIVVLTGG--- 83
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK- 137
Y RI + + L + ++ISG A
Sbjct: 84 ---------------YQRIDQAVDLLRKGSGR----RLLISG-VHPSTSPATIRKMTQAS 123
Query: 138 --LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L V+ + +++DT NA ++ I + ++++V+S YH++RS + +
Sbjct: 124 PDLFACCVD-----MGYRAIDTIGNANETAQWIHDKGFSSVLVVTSNYHMRRSLMELRRT 178
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALK----EYIGILIAYYR 239
T+ + A A + AL+ EY ILIAY R
Sbjct: 179 DHETQFIPYPVVTADLR---TRAWYADPN-ALRTLMSEYAKILIAYTR 222
>gi|256375178|ref|YP_003098838.1| hypothetical protein Amir_1036 [Actinosynnema mirum DSM 43827]
gi|255919481|gb|ACU34992.1| protein of unknown function DUF218 [Actinosynnema mirum DSM 43827]
Length = 248
Score = 73.0 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 55/167 (32%), Gaps = 16/167 (9%)
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
+Q + L+ + + ++LG G P+ R+ LY
Sbjct: 55 WAWVQATSAPYRLTAAEVPETPVALVLGAGIRD--------GRPTPFLAGRLDVAADLYH 106
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
K +++ GD + E N LL GV I + LDT+ + +
Sbjct: 107 RGKV-----KVLLVSGDNSRPDYDEPTAMRNYLLRQGVPDSAIVSDYAGLDTWDS---CA 158
Query: 166 SMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
+ + +V+ +HL R+ + GI D A S
Sbjct: 159 RANRIFGVTSATVVTQRFHLPRAVALCRAAGIEAYGVGHDTWGARTS 205
>gi|303242098|ref|ZP_07328589.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
gi|302590392|gb|EFL60149.1| protein of unknown function DUF218 [Acetivibrio cellulolyticus CD2]
Length = 218
Score = 73.0 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 27/136 (19%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
++I++LG+ T + LY I+ISGG +
Sbjct: 25 ADLIIVLGSHDTRVAQ-----------------RGAELY----LKGFAPFIVISGGLGKI 63
Query: 126 HG----LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILV 179
+ E+ + GV + I LET+S +T +N F+ +I +N+ +II V
Sbjct: 64 TKHLWNMTEAEKFAEIACSMGVPEEKIILETRSTNTGENILFTRELILDRNLNINSIITV 123
Query: 180 SSAYHLKRSQLYFQHF 195
+ Y +R+ F+ F
Sbjct: 124 NKPYMERRTYAAFKKF 139
>gi|163801177|ref|ZP_02195077.1| putative manganese-dependent inorganic pyrophosphatase [Vibrio sp.
AND4]
gi|159175526|gb|EDP60323.1| putative manganese-dependent inorganic pyrophosphatase [Vibrio sp.
AND4]
Length = 210
Score = 73.0 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 96 RIFE-TMRLYKSCKQHSMHCTIIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKL 150
R+ E LY + I+ SGG + +E+ + +GV + I
Sbjct: 35 RVAEYAAELYHQ----KLASLIVFSGGKGRFTDSLFEKSEAETFAEIAKLAGVPNEAILT 90
Query: 151 ETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHF 195
ETQS ++ +N +F+ ++++ +++ILV + +R+ F+
Sbjct: 91 ETQSTNSGENIRFTDQLLQDKGVNCESLILVQKPFMERRAIATFEKQ 137
>gi|269960840|ref|ZP_06175211.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834504|gb|EEZ88592.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 212
Score = 73.0 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKLETQ 153
Q + I+ SGG+ + +E+ + +GV + I +ET+
Sbjct: 34 LRVAEYAAKLYQQKLAPLIVFSGGEGRFTDGLFDKSEAETFAEIAKLAGVPSEAILVETK 93
Query: 154 SLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHF 195
S ++ +N +F+ ++K ++ILV + +R+ F+
Sbjct: 94 SSNSGENVRFTEQLLKEKGISCDSLILVQKPFMERRAIATFEKQ 137
>gi|237785260|ref|YP_002905965.1| hypothetical protein ckrop_0661 [Corynebacterium kroppenstedtii DSM
44385]
gi|237758172|gb|ACR17422.1| putative secreted protein [Corynebacterium kroppenstedtii DSM
44385]
Length = 216
Score = 73.0 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 62/173 (35%), Gaps = 22/173 (12%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS-GGDPQK 125
++IV++G PS +R+ + +Y+ +I + GG +
Sbjct: 44 DVIVVMGA--------AQYNGTPSEWFAARLDKAATMYQEGT-----APVIATLGGKQEG 90
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILVSSAY 183
E+ L + GV I + DT +A+ + +N + ++V+ +
Sbjct: 91 DQYTEAEAGKMYLEKLGVPSSAIVPISDGSDTLTSARALAEYSHNENRHWSSAVVVTDPW 150
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
H R++ + G T + + + + +S L E G++
Sbjct: 151 HALRARTMVRDQGFTTHSVSTRHGPSVWSRD------AQFSGILHETGGLIFY 197
>gi|39997331|ref|NP_953282.1| hypothetical protein GSU2233 [Geobacter sulfurreducens PCA]
gi|39984222|gb|AAR35609.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
gi|298506268|gb|ADI84991.1| YdcF-like protein of unknown function DUF218 [Geobacter
sulfurreducens KN400]
Length = 199
Score = 73.0 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 31/198 (15%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK-KDGNIIVLLGNGTTIIPTIPAIRI 87
+ I I+ I++ L + S + + + IV+L G
Sbjct: 2 ALFFRGIISLLIVVLIIVAVLFVDFAYKTFSLRQRDVTTDAIVVLAGGR----------- 50
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
R+ E +RL++ K ++ + DP ++ ++ E D
Sbjct: 51 -------GRVEEGVRLFRERKGTYLYLIGV----DPVVKKR---DLFRDREGERL--ADR 94
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF---GINTKASCS 204
+ LE S +T +NA + +I + ++I L++S YH+KR+ L F+ I
Sbjct: 95 VFLENLSRNTLENALYGREIIMRKEVRSIRLITSRYHMKRATLLFRQVLPRDIAIYPHPV 154
Query: 205 DYLNAYYSIIPLSANFYL 222
D N +F L
Sbjct: 155 DTTNLKERWWDDKGSFRL 172
>gi|21220935|ref|NP_626714.1| integral membrane protein [Streptomyces coelicolor A3(2)]
gi|289771792|ref|ZP_06531170.1| integral membrane protein [Streptomyces lividans TK24]
gi|6759567|emb|CAB69760.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
gi|289701991|gb|EFD69420.1| integral membrane protein [Streptomyces lividans TK24]
Length = 228
Score = 73.0 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 27/188 (14%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + ++ C + L ++ L+ + + V+ G G
Sbjct: 18 QRRLVRVVVAGCVLALLPSAWLRVVTDDRLRTVADV-----------PRTEVAVVFGAGL 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
EPS R+ LY++ + ++++G D + E
Sbjct: 67 WD--------GEPSPYLAHRLDAAAELYRAGR----IAVVLVTG-DNSREEYDEPDAMRA 113
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+ GV I + DT+ + + + +L+S +H++R+ Q G
Sbjct: 114 YLVRHGVPDGRIVSDYAGFDTWDSCVRAKKI---FGVDRAVLISQGFHIRRAVALCQEAG 170
Query: 197 INTKASCS 204
+ +
Sbjct: 171 VASYGVGV 178
>gi|294629212|ref|ZP_06707772.1| SanA protein [Streptomyces sp. e14]
gi|292832545|gb|EFF90894.1| SanA protein [Streptomyces sp. e14]
Length = 219
Score = 72.6 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/207 (14%), Positives = 67/207 (32%), Gaps = 23/207 (11%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R++ + + + + T L + +P+ ++ ++ G G
Sbjct: 8 RRRLVQAVMAVCVLALLP----ATWLYVSTGDRLRTTADAPR----TDVAIVFGAGLW-- 57
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
EPS R+ + LY+ + +++ GD + E L
Sbjct: 58 -----HGGEPSPYLAHRLDAAVTLYREGRI-----KVVLVTGDNSRTDYDEPDAMRAYLT 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + DT+ + + + +LVS +H++R+ G+++
Sbjct: 108 RHGVPGARIVSDYAGFDTWDSCVRAKKV---FGVDRAVLVSQGFHIRRAVALCDAAGVDS 164
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELA 226
D ++ + + A
Sbjct: 165 YGVGVDAVHDVTWYYGGAREVFAAGKA 191
>gi|318040912|ref|ZP_07972868.1| hypothetical protein SCB01_04359 [Synechococcus sp. CB0101]
Length = 232
Score = 72.6 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 76/231 (32%), Gaps = 45/231 (19%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
W + + + + M +L+S IG + L L P P + VL
Sbjct: 44 VWWIARRPLPVVVAMVLIAVLYSPIGTTALSAWLQGQL------PPSVPAASQPVA--VL 95
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG G I A R + +Y +SG ++
Sbjct: 96 LGRGPQIAAATTA-----EASRLVRDHAAVAVY-------------VSG---------DA 128
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQL 190
L GV I ++ + T++NA +++ ++ G + L++ + L R+
Sbjct: 129 FAAAQALQRQGVPAPLIAGDSCARTTWENATRTATWLRRHHPGAPVALITDPWQLPRATA 188
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
F+ + D PL + LAL+E L+ +G
Sbjct: 189 AFRRQDLVVMPIAVD---------PLLSAGQRNRLALRETAATLLYGLQGR 230
>gi|332676512|gb|AEE73328.1| conserved membrane-associated protein, OmpA family
[Propionibacterium acnes 266]
Length = 229
Score = 72.6 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 64/185 (34%), Gaps = 22/185 (11%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
IR + +C + +G + L SY + + IVL G +
Sbjct: 18 PIRTVVVSTCIAAFVALLGPWALAGAL------SYGKVHDVADTEPRDVAIVL---GAQV 68
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+P+ PS R+ LY+S K +I+ GD ++ E V L
Sbjct: 69 LPS-----GTPSAYLRGRLDVAADLYRSGK-----AKVILVSGDHRETHYNEPKVMKTYL 118
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ GV I + LDT+ + + I+V+ YH R+ + G++
Sbjct: 119 VSKGVPAARIVEDVAGLDTYDTCVRARRI---FGVDRAIMVTQDYHEIRTVATCRMTGLD 175
Query: 199 TKASC 203
Sbjct: 176 AVGVP 180
>gi|260425651|ref|ZP_05779631.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260423591|gb|EEX16841.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 165
Score = 72.6 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 69/179 (38%), Gaps = 20/179 (11%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++D + ++LG P P+ + R E RL+ + ++
Sbjct: 5 REDLPVALVLGA-----AVWPGGEASPTLRR--RALEGARLWHAGAVRAVVGCG-----G 52
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
H AE+ + ++GV D+ E +S T +N +F+ +++ + + +++VS
Sbjct: 53 VGVHPPAEAALIVEICRQAGVPARDLHREARSTTTEENIRFALPILERLAVREVVVVSER 112
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
YHL R+ L + G+ + + A + A +E + RG
Sbjct: 113 YHLPRALLVARRAGLVARGVAPSFRGADPAG--------QLRAAAREVVAYGWYALRGK 163
>gi|94986101|ref|YP_605465.1| hypothetical protein Dgeo_2002 [Deinococcus geothermalis DSM 11300]
gi|94556382|gb|ABF46296.1| protein of unknown function DUF218 [Deinococcus geothermalis DSM
11300]
Length = 198
Score = 72.6 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 14/130 (10%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
P +P+ + +++LG PS R+ + LY++
Sbjct: 33 PPSRAPRTEWPHATLIVLGA--------AQYAGHPSPAFRRRLDHALALYQAGGVQ---- 80
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
T++++GG +E V N L G+ R + ET+S T +N + + ++ + G
Sbjct: 81 TVVVTGGRRPGDPYSEGEVGVNYLHRRGIPRSALLAETRSRTTVENLRGARRLL--LPGT 138
Query: 175 NIILVSSAYH 184
+ LV+ H
Sbjct: 139 PVTLVTDEAH 148
>gi|159482172|ref|XP_001699147.1| hypothetical protein CHLREDRAFT_185300 [Chlamydomonas reinhardtii]
gi|158273210|gb|EDO99002.1| predicted protein [Chlamydomonas reinhardtii]
Length = 312
Score = 72.6 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 18/144 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P+ + + IV+L G T ++PA R+ + L + ++ ++
Sbjct: 84 PEAHRTVDAIVVLAGGQTGPDSVPAWVER-------RLDTALSLQRLQRRPVPILSL--G 134
Query: 120 GGDPQKHG--------LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-N 170
GG P K + ES L + G + + E S DT NA FS ++
Sbjct: 135 GGTPHKGPFLDERGFVIHESTACARYLQDRGADPSLLLKEVSSYDTVGNAYFSLTIHALP 194
Query: 171 MQGKNIILVSSAYHLKRSQLYFQH 194
+ + +V+S +H+ R+ F
Sbjct: 195 AGWRRLAVVTSDFHMPRTASLFHA 218
>gi|193212745|ref|YP_001998698.1| hypothetical protein Cpar_1090 [Chlorobaculum parvum NCIB 8327]
gi|193086222|gb|ACF11498.1| protein of unknown function DUF218 [Chlorobaculum parvum NCIB 8327]
Length = 196
Score = 72.6 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
LLF I + T+ +L + L S + +K ++IV+LG
Sbjct: 7 ISLLFFLITSTLFATV---YLGLGFLVSLHSTKPEK-ADVIVVLGG-------------- 48
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
+ R+ + LYK+ + I+++G D + + + ++LE+GV + I
Sbjct: 49 ---DNGLRVEKGTELYKAGYAKN----IVLTGIDSRYYSPSRPNWRERRMLEAGVPKKAI 101
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++ S T++ A+ +S ++ + ++VS H+ R
Sbjct: 102 TVDIWSETTWEEAENTSDLMDKKGWNSALVVSDPPHMLR 140
>gi|91226017|ref|ZP_01260944.1| hypothetical protein V12G01_20121 [Vibrio alginolyticus 12G01]
gi|91189458|gb|EAS75735.1| hypothetical protein V12G01_20121 [Vibrio alginolyticus 12G01]
Length = 199
Score = 72.6 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 96 RIFE-TMRLYKSCKQHSMHCTIIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKL 150
R+ E +LY + I+ SGG+ + +E+ + SGV + I L
Sbjct: 22 RVAEHAAKLYHQ----KLAPLIVFSGGEGRFTDGLFEKSEAETFAEIAKLSGVPSEAILL 77
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHF 195
ET+S ++ +N +F+ +K + + ILV + +R+ F+
Sbjct: 78 ETKSTNSGENVRFTEQRLKEEGKQCSSFILVQKPFMERRAIATFEKQ 124
>gi|29832215|ref|NP_826849.1| integral membrane protein [Streptomyces avermitilis MA-4680]
gi|29609333|dbj|BAC73384.1| putative integral membrane protein [Streptomyces avermitilis
MA-4680]
Length = 230
Score = 72.6 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/210 (13%), Positives = 67/210 (31%), Gaps = 27/210 (12%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ ++ + C + L + L+ + + + V+ G G
Sbjct: 20 RRRAVQVVMLGCVLALLPATWMFAVAGDRLRTTEDA-----------PRTEVAVVFGAGL 68
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
EPS R+ +LY++ + +++ GD + E
Sbjct: 69 --------WAGEPSPYLAHRLDAAAKLYRAGRIE-----VVLVTGDNSREDYDEPDAMRT 115
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L GV I + DT+ + + + + +L+S +H++R+ Q G
Sbjct: 116 YLTRHGVPDGRIVSDYAGFDTWDSCVRAKKI---FGVNHAVLISQGFHIRRAVALCQAAG 172
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELA 226
+++ D + + + A
Sbjct: 173 VDSYGIGVDAKHDATWYYGGTREIFAAGKA 202
>gi|159899964|ref|YP_001546211.1| hypothetical protein Haur_3447 [Herpetosiphon aurantiacus ATCC
23779]
gi|159893003|gb|ABX06083.1| protein of unknown function DUF218 [Herpetosiphon aurantiacus ATCC
23779]
Length = 233
Score = 72.2 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 63/195 (32%), Gaps = 27/195 (13%)
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYK 105
+ + P ++ G G +PS R+ ++LY+
Sbjct: 34 WATADYRFADVASIPSQPVA----IVFGAGIRYN--------QPSAALRERLDGAIQLYQ 81
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
+ + +++SG + Q + E V + + G+ I + T++ +
Sbjct: 82 AGRVQH----LLMSGDNSQTN-YDEVSVMRDYAIAHGIPASAITRDYAGFSTYETCYRAK 136
Query: 166 SMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN----AYYSIIPLSANFY 221
++ ILV+ YHL R+ + G+ N + P +
Sbjct: 137 AI---FGVNQAILVTQDYHLPRAIYTCRELGVAAIGLSIPDWNFKPEQSTTYYPPATQIR 193
Query: 222 LTELALKEYIGILIA 236
T +E++ A
Sbjct: 194 YTT---REWLARCKA 205
>gi|311739886|ref|ZP_07713720.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304959|gb|EFQ81028.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 147
Score = 72.2 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 57/155 (36%), Gaps = 21/155 (13%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
P SR+ + + LY + II+SG E+ L+E GV
Sbjct: 14 HGYPGAMLRSRLDKALALYSGQQ-------IIVSG-------RGEAGPMATYLIERGVPA 59
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+ + +E ++ T +N + + + + +V++ +H+ R+ L+ H GI + +
Sbjct: 60 ERVVVEPEATSTNENLENAHRLAPDAVLH---VVTNDFHILRTALWAWHLGIAVQLHPAR 116
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
L A + I+ RG
Sbjct: 117 TPWRLMPRNYLREVLATPHSAAR----IVWRRMRG 147
>gi|300857915|ref|YP_003782898.1| hypothetical protein cpfrc_00498 [Corynebacterium
pseudotuberculosis FRC41]
gi|300685369|gb|ADK28291.1| hypothetical protein cpfrc_00498 [Corynebacterium
pseudotuberculosis FRC41]
gi|302205641|gb|ADL09983.1| Hypothetical protein CpC231_0496 [Corynebacterium
pseudotuberculosis C231]
gi|302330192|gb|ADL20386.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
1002]
gi|308275876|gb|ADO25775.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
I19]
Length = 155
Score = 72.2 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 60/152 (39%), Gaps = 20/152 (13%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
EP R+ + L + +++SG E+ V + L+ G++
Sbjct: 22 EPGHVLLWRLQHALELSQQTSG-----PVVVSGKG-------EAAVMGDWLVRHGLDPHR 69
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
+ +E ++ T +N + + +++ I+V+S +H R+ + +H GI S +
Sbjct: 70 LIIEPEATSTNENLENAHALLPETH--TWIVVTSDFHKLRTLAWARHLGIPITVSSAVTK 127
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + F L L+ IA+ R
Sbjct: 128 PPFRVRNFVREIFALPHSLLR------IAWRR 153
>gi|269968725|ref|ZP_06182718.1| hypothetical protein VMC_41480 [Vibrio alginolyticus 40B]
gi|269826652|gb|EEZ80993.1| hypothetical protein VMC_41480 [Vibrio alginolyticus 40B]
Length = 212
Score = 72.2 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 96 RIFE-TMRLYKSCKQHSMHCTIIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKL 150
R+ E +LY + I+ SGG+ + +E+ + SGV + I L
Sbjct: 35 RVAEHAAKLYHQ----KLAPLIVFSGGEGRFTDGLFEKSEAETFAEIAKLSGVPSEAILL 90
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHF 195
ET+S ++ +N +F+ +K + + ILV + +R+ F+
Sbjct: 91 ETKSTNSGENVRFTEQRLKEEGKQCSSFILVQKPFMERRAIATFEKQ 137
>gi|269124570|ref|YP_003297940.1| hypothetical protein Tcur_0298 [Thermomonospora curvata DSM 43183]
gi|268309528|gb|ACY95902.1| protein of unknown function DUF218 [Thermomonospora curvata DSM
43183]
Length = 230
Score = 72.2 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 61/163 (37%), Gaps = 18/163 (11%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ + ++LG A PS R+ LY++ K + I+++G D
Sbjct: 55 EAAPVALVLGA--------AAWGDAPSPFLAGRLDAAAELYRAGKVRA----ILVTG-DN 101
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ G E V N L G+ + + DT+ + + + + I+V+ +
Sbjct: 102 SREGYDEPTVMWNYLTAKGIPGHKVVRDYAGFDTWDSCVRAKRI---FGVERAIVVTQTF 158
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
HL R+ + G+ D + + +P ++ LA
Sbjct: 159 HLPRAVALCRAAGLEATGVGHDSMA--TAALPTCYGYFRETLA 199
>gi|290960619|ref|YP_003491801.1| hypothetical protein SCAB_62441 [Streptomyces scabiei 87.22]
gi|260650145|emb|CBG73261.1| putative secreted protein [Streptomyces scabiei 87.22]
Length = 221
Score = 72.2 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 54/163 (33%), Gaps = 16/163 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ ++ G G + EPS R+ LY+S + +++ GD
Sbjct: 47 PRTEVAMVFGAGL--------WQGEPSPYLARRLDAAAELYRSGRI-----KVVLVTGDN 93
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ E L E GV D I + DT+ + + + +L+S +
Sbjct: 94 SRVEYDEPDAMRGYLTEHGVPDDRIVSDYAGFDTWDSCVRARKI---FGVDRAVLISQGF 150
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
H++R+ + G+ + + + + A
Sbjct: 151 HIRRAVALCEEAGVESYGVGVQDRHDATWYYGATRELFAAGKA 193
>gi|320010937|gb|ADW05787.1| protein of unknown function DUF218 [Streptomyces flavogriseus ATCC
33331]
Length = 253
Score = 72.2 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 47/136 (34%), Gaps = 16/136 (11%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+ G G PS R+ LY++ K ++++G + +
Sbjct: 78 VVFGAGL--------WEGRPSPYLARRLDAAAELYRTGKVR----VVLVTGDNSRVE-YD 124
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E L GV I + DT+ + + + +LVS +H++R+
Sbjct: 125 EPDAMRTYLTAQGVPDGRIVSDHAGFDTWDSCVRARKV---FGVDRAVLVSQGFHIRRAI 181
Query: 190 LYFQHFGINTKASCSD 205
+ GI+ D
Sbjct: 182 ALCRSAGIDAYGVGVD 197
>gi|302560768|ref|ZP_07313110.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
gi|302478386|gb|EFL41479.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
Length = 233
Score = 72.2 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 49/142 (34%), Gaps = 16/142 (11%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ V+ G G EPS R+ LY++ + +++ GD
Sbjct: 54 PRAEVAVVFGAGLWD--------GEPSPYLAHRLDAAAELYRAGRIE-----VVLVTGDN 100
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ E L GV I + DT+ + + + +L+S +
Sbjct: 101 SREEYDEPDAMRAYLTRHGVPGSRIVSDYAGFDTWDSCVRAKKI---FGVDRAVLISQGF 157
Query: 184 HLKRSQLYFQHFGINTKASCSD 205
H++R+ + G+++ D
Sbjct: 158 HIRRAVALCETAGVSSYGVGVD 179
>gi|241663925|ref|YP_002982285.1| hypothetical protein Rpic12D_2339 [Ralstonia pickettii 12D]
gi|240865952|gb|ACS63613.1| protein of unknown function DUF218 [Ralstonia pickettii 12D]
Length = 190
Score = 72.2 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 69/209 (33%), Gaps = 30/209 (14%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
+L G I+ L + L ++IV+LG
Sbjct: 11 VLAWIGGCAIVAMAFSAVLVCGAKSWLREEPRLAHADVIVVLGG---------------- 54
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
+S R+ LY + + +SG + ++ +L+ +GV I
Sbjct: 55 -ESGQRVIGAAELYHA----GAAPRVFVSGQG-------DCLLIERRLVMAGVPAGRIGH 102
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
E S T +NA+ + + Q ++ ILV+S YH R+ F+ + +
Sbjct: 103 ECVSGSTMENARMTRQTLAGQQVQSAILVTSWYHTGRALAVFRKV-WPEITWGAQGVFP- 160
Query: 211 YSIIPLSANFYLTELALKEYIGILIAYYR 239
+ S Y L EY+ R
Sbjct: 161 GDTLAKSVPVYEAGSILAEYVKRAWYAVR 189
>gi|218281320|ref|ZP_03487808.1| hypothetical protein EUBIFOR_00373 [Eubacterium biforme DSM 3989]
gi|218217505|gb|EEC91043.1| hypothetical protein EUBIFOR_00373 [Eubacterium biforme DSM 3989]
Length = 179
Score = 72.2 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 70/144 (48%), Gaps = 20/144 (13%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y P + P+ KK +LLG T+ + +I+ R ++ Y+ ++
Sbjct: 16 YFFPFI-PKRKKHYTYALLLGCPAHDDGTMSSSQIK-------RCNLAIKAYQQ----NL 63
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
+ T+IISG + + + E+ V + + + + LET + +TF+N +FS +I+
Sbjct: 64 YDTLIISGSNVKNEFI-EAKVMHAYIQNKMDIP---TILETNARNTFENFKFSKDIIQK- 118
Query: 172 QGKNIILVSSAYHLKRSQLYFQHF 195
+++++++S H KR+ + F
Sbjct: 119 --QDVLILTSQTHAKRACAIARQF 140
>gi|187929799|ref|YP_001900286.1| hypothetical protein Rpic_2729 [Ralstonia pickettii 12J]
gi|187726689|gb|ACD27854.1| protein of unknown function DUF218 [Ralstonia pickettii 12J]
Length = 192
Score = 72.2 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 32/179 (17%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
++IV+LG +S R+ LY + + + +SG
Sbjct: 44 AQADVIVVLGG-----------------ESGQRVIGAAELYHA----GVAPRVFVSGQG- 81
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ ++ +L+ +GV + I E S T +NA+ + + Q ++ ILV+S Y
Sbjct: 82 ------DCLLIERRLVMAGVPAERIGHECVSGSTMENARMTRGTLAGQQVQSAILVTSWY 135
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA--YYRG 240
H R+ F+ + + + + S Y L EY+ YR
Sbjct: 136 HTGRALAVFRK--VWPEVTWGAQGVFPGDTLAKSVPIYEAGSILAEYVKRAWYAVRYRA 192
>gi|320160500|ref|YP_004173724.1| hypothetical protein ANT_10900 [Anaerolinea thermophila UNI-1]
gi|319994353|dbj|BAJ63124.1| hypothetical protein ANT_10900 [Anaerolinea thermophila UNI-1]
Length = 222
Score = 72.2 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 77/223 (34%), Gaps = 33/223 (14%)
Query: 21 RKIF--FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP-QWKKDGNIIVLLGNGTT 77
R+ F +S F++L ++ L Y + + P + + ++ G G +
Sbjct: 3 RRTFSRIVSMFIVLILVATTLLLAARGFTAL---YAKSRIIPVADAPEMPVAIVFGAGLS 59
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
T PS R+ LY K +++SG D + E
Sbjct: 60 RDGT-------PSPVLRDRVETAAALYFQGKVK----KLLMSG-DNRFVDYNEPGAMRQY 107
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ GV ++I L+ T+ + ++ ILV+ +HL R+ G+
Sbjct: 108 ALDLGVPAENIVLDYAGRRTYDTCYRARAI---FGVTEAILVTQPFHLPRALYLCNQLGV 164
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELA--LKEYIGILIAYY 238
+D ++L ++E + L+A +
Sbjct: 165 KAWGVPAD----------NRYYLKRSQLIWNIRETMATLVALW 197
>gi|304394191|ref|ZP_07376114.1| conserved hypothetical protein [Ahrensia sp. R2A130]
gi|303293631|gb|EFL88008.1| conserved hypothetical protein [Ahrensia sp. R2A130]
Length = 241
Score = 72.2 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/223 (20%), Positives = 83/223 (37%), Gaps = 46/223 (20%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
S L+ FIG G++ LK L + +V+L G+
Sbjct: 34 LFSRLFLVLLFIGVGLLVGGFLKFSDGVTSTEQLEAARVPAADAVVVLTGGS-------- 85
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN-----NKLL 139
+RI E + L + K ++ISG + + + L
Sbjct: 86 ----------ARIAEGLDLIAAGKGK----RLLISG---VNEDTSVAALKAINTNHAPLF 128
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH----F 195
+ V+ +E +LDT NA+ ++ + + ++I+V+S+YH+ RS L F+
Sbjct: 129 DCCVD-----VERAALDTIGNARETAKWVADKGYSSLIVVTSSYHMPRSLLEFRRTMPKL 183
Query: 196 GINTKASCSDYLNAYYSII-PLSANFYLTE------LALKEYI 231
I A + L P + F + E A++EY+
Sbjct: 184 NIKPHAVILEPLAREGWWKNPETLRFLVVEYVKYVGAAMREYL 226
>gi|327484303|gb|AEA78710.1| hypothetical protein VCLMA_A1486 [Vibrio cholerae LMA3894-4]
Length = 205
Score = 72.2 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 61/161 (37%), Gaps = 28/161 (17%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L + ++ + L Q ++I++LG+ +
Sbjct: 1 MSKRLYQQIETLWDYLQLHQQPDV-ADLILVLGSNDVRVAE-----------------HA 42
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLD 156
+LY + ++ SGG + +E+ + ++GV I LETQS +
Sbjct: 43 AKLYHQ----GLAPYVLFSGGFGRFTQGVFNHSEAETFAAIAKDAGVPEHAILLETQSTN 98
Query: 157 TFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ +N FS ++ + K I+LV Y +R+ F+
Sbjct: 99 SGENLHFSHQLLVQQVRPAKRILLVQKPYMERRAYATFKQQ 139
>gi|148980444|ref|ZP_01816066.1| hypothetical protein VSWAT3_04886 [Vibrionales bacterium SWAT-3]
gi|145961247|gb|EDK26560.1| hypothetical protein VSWAT3_04886 [Vibrionales bacterium SWAT-3]
Length = 215
Score = 71.8 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 11/107 (10%)
Query: 96 RIFE-TMRLYKSCKQHSMHCTIIISGGDPQ----KHGLAESIVYNNKLLESGVERDDIKL 150
R+ E LY + I+ SGG + +E+ + +SGV DI +
Sbjct: 41 RVAEYAAELYHQ----KIAPYIVFSGGVGRFTEGNFDRSEAETFAAIARDSGVPESDIII 96
Query: 151 ETQSLDTFQNAQFSSSMIKN--MQGKNIILVSSAYHLKRSQLYFQHF 195
E Q+ +T +N +F+ ++ + K + LV + KR+ F
Sbjct: 97 EKQATNTGENVRFTYELLTECGLSPKKLTLVQKPFMEKRTYATFSKQ 143
>gi|254389035|ref|ZP_05004265.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294812508|ref|ZP_06771151.1| putative integral membrane protein [Streptomyces clavuligerus ATCC
27064]
gi|197702752|gb|EDY48564.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294325107|gb|EFG06750.1| putative integral membrane protein [Streptomyces clavuligerus ATCC
27064]
Length = 234
Score = 71.8 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/188 (13%), Positives = 59/188 (31%), Gaps = 27/188 (14%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + + C + L + R + + + ++ ++ G G
Sbjct: 23 KRWLVRGAMFVCVLALLPATWTHRVAD-----------RHVHAAEDVPAQDVALVFGAGL 71
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
+ P+ R+ LY+ K +I+ GD + E
Sbjct: 72 --------WQGRPTPYLAHRLDTAADLYRRGKV-----KVILVTGDNSREEYDEPDAMRT 118
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+ GV I + D++ + + + +LVS +H++R+ + G
Sbjct: 119 YLVGRGVPERRIVSDHAGFDSWDSCVRAKEI---FGVDRAVLVSQGFHIRRAVALCRTAG 175
Query: 197 INTKASCS 204
I +
Sbjct: 176 IESYGVGV 183
>gi|218437925|ref|YP_002376254.1| hypothetical protein PCC7424_0930 [Cyanothece sp. PCC 7424]
gi|218170653|gb|ACK69386.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7424]
Length = 230
Score = 71.8 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 52/140 (37%), Gaps = 30/140 (21%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K + I++LG S R + RL K IIIS G
Sbjct: 50 KPADAILVLGG------------------SIQREIDAARLGKYY----PDIPIIISSG-- 85
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+E + ++ D I LE + TF N +S +++ +I+++S
Sbjct: 86 -----SEEPCMLLIFQKFQLKLDRIWLEKCADSTFGNFFYSVPILQGWGVHKVIVITSPS 140
Query: 184 HLKRSQLYFQ-HFGINTKAS 202
HL R++ Q H G AS
Sbjct: 141 HLPRAKWLAQIHLGAKGIAS 160
>gi|260575334|ref|ZP_05843334.1| protein of unknown function DUF218 [Rhodobacter sp. SW2]
gi|259022594|gb|EEW25890.1| protein of unknown function DUF218 [Rhodobacter sp. SW2]
Length = 163
Score = 71.8 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 55/172 (31%), Gaps = 21/172 (12%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG P P+ R L + KH
Sbjct: 4 YVIVLGA-----AVWPGGVASPTL--ARRASHAAALALQTGGTVITTG------GLGKHP 50
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ V GV D I E S T++N + ++ G ++V+ YHL R
Sbjct: 51 PTEAAVAAAICAGLGVPGDRILTEVLSTTTYENLANAKRLMPA--GATAVIVTDYYHLPR 108
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++L GIN + PL + L+E + + + R
Sbjct: 109 ARLTAWALGINATG---SFPRGGLRQTPLHRHLRQ---VLREALALPVYAVR 154
>gi|156741328|ref|YP_001431457.1| hypothetical protein Rcas_1343 [Roseiflexus castenholzii DSM 13941]
gi|156232656|gb|ABU57439.1| protein of unknown function DUF218 [Roseiflexus castenholzii DSM
13941]
Length = 213
Score = 71.8 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 64/193 (33%), Gaps = 31/193 (16%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+I + L + IP + L + I++LG P
Sbjct: 14 RRIPGYETLVALILVLAIITIPFLAAPWLIVD--------DAVDTADAIIVLGG--EAYP 63
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL--AESIVYNNKL 138
+R + LY + ++ +GG P + + V
Sbjct: 64 P-------------NRTIHALALYHQHR----APVVVFTGGAPPGRPPETSSAQVARRLA 106
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--G 196
L G+ D L + T+ A ++ +++++V+ YH +R+ F+
Sbjct: 107 LARGLPPDVALLADGAQSTYDEAVLVRELVAAHGWRSLMIVTDPYHTRRAVRTFRTLIPN 166
Query: 197 INTKASCSDYLNA 209
+ AS + +L+
Sbjct: 167 AHVTASAAPFLSP 179
>gi|197105490|ref|YP_002130867.1| hypothetical protein PHZ_c2027 [Phenylobacterium zucineum HLK1]
gi|196478910|gb|ACG78438.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 186
Score = 71.8 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 11/147 (7%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
PS RI + ++ ++ SGG + HG +E+ V +L G+ +
Sbjct: 29 HGPSPSLLRRIGYGWQAAQAH----PGAQVLCSGGVGR-HGPSEASVMAERLAALGLAAE 83
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+ L+ +SLDT Q+A + + + ++++ S AYH+ R +L G + A
Sbjct: 84 RLILDEESLDTLQSAGAVARWRRRLGAADVVVCSDAYHVPRIRLLLGALGTPSVAGP--- 140
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGI 233
+ + T ++L+E + I
Sbjct: 141 ---RLPGRGGAGLAHWTRMSLREGLAI 164
>gi|256375410|ref|YP_003099070.1| hypothetical protein Amir_1272 [Actinosynnema mirum DSM 43827]
gi|255919713|gb|ACU35224.1| protein of unknown function DUF218 [Actinosynnema mirum DSM 43827]
Length = 212
Score = 71.8 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 60/178 (33%), Gaps = 18/178 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++ V+LG PS +R+ RLY+ I+ +G
Sbjct: 40 DDRTHADMAVVLGA--------AQYNGVPSDVLAARLEHARRLYEQDVVDY----IVTTG 87
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E L E GV D + + DT + + + + ++VS
Sbjct: 88 GRQPGDNFTEGEAGRIWLEERGVPADRVIEIGEGTDTLGSIKAVAVRAHERSLRTAVIVS 147
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+H R++ + G++ S + + +Y+ +E + ++ +
Sbjct: 148 DPWHSLRARTMAEDQGLDAWTSPT--RSGPNVQTREMQLYYIR----RETMALMYYHL 199
>gi|291080743|ref|ZP_06534716.2| hypothetical protein Salmonellaentericaenterica_06052 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 69
Score = 71.4 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 185 LKRSQLYFQHFGINTKASCSDYL------NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ R+ ++FQH G+N + ++ L N + IP ++ A E +G L +
Sbjct: 1 MPRAMIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRLWQWL 60
Query: 239 RG 240
+G
Sbjct: 61 KG 62
>gi|89890987|ref|ZP_01202495.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
gi|89516631|gb|EAS19290.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
Length = 221
Score = 71.4 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 63/167 (37%), Gaps = 25/167 (14%)
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG P + P Q R+ + LY + ++SG D + E
Sbjct: 49 VLGA-----SVRPDKSLSPILQ--DRVDKAYELY----DKGIIKKFLLSG-DHGQEDYDE 96
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L + GV DI L+ DT+ + + + + + +I+++ +HL R+
Sbjct: 97 VNAMRRYLNDKGVPNQDIFLDHAGFDTYDSMFRAREVFQ---VEELIVITQEFHLPRAIY 153
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ G+ + +D P +A F +E++ + A+
Sbjct: 154 VGKKMGLKLQGFIAD-----NREYPGNAYFTR-----REWLANIKAW 190
>gi|255323880|ref|ZP_05365006.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
gi|255299060|gb|EET78351.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
Length = 151
Score = 71.4 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 58/155 (37%), Gaps = 21/155 (13%)
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
P SR+ + + LY + II+SG E+ L+E GV
Sbjct: 18 HGYPGAMLRSRLDKALALYSGQQ-------IIVSG-------RGEAGPMATYLIERGVPA 63
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+ + +E ++ T +N + + + + + +V++ +H+ R+ L+ H GI + +
Sbjct: 64 ERVVVEPEATSTNENLENAHRLAPDAVLQ---VVTNDFHVLRTALWAWHLGIAVRLHPAR 120
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
L A + I+ RG
Sbjct: 121 TPWRLMPRNYLREVLATPHSAAR----IVWRRMRG 151
>gi|229529274|ref|ZP_04418664.1| hypothetical protein VCG_002367 [Vibrio cholerae 12129(1)]
gi|229333048|gb|EEN98534.1| hypothetical protein VCG_002367 [Vibrio cholerae 12129(1)]
Length = 215
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 61/161 (37%), Gaps = 28/161 (17%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L + ++ + L Q ++I++LG+ +
Sbjct: 1 MSKRLYQQIETLWDYLQLHQQPDV-ADLILVLGSNDVRVAE-----------------HA 42
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLD 156
+LY + ++ SGG + +E+ + ++GV I LETQS +
Sbjct: 43 AKLYHQ----GLAPYVLFSGGFGRFTQGVFNHSEAETFAAIAKDAGVPEHAILLETQSTN 98
Query: 157 TFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ +N FS ++ + K I+LV Y +R+ F+
Sbjct: 99 SGENLHFSHQLLVQQVRPAKRILLVQKPYMERRAYATFKQQ 139
>gi|307943505|ref|ZP_07658849.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307773135|gb|EFO32352.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 245
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
C + FI ++ ++ F+ + + + IV+L G
Sbjct: 53 CLACVLGFI--VVVGLVVGSFASFAERVATIETPRDPRADAIVVLTGGK----------- 99
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
RI + MRL + + + + + G ++ +A++ + L V+ D
Sbjct: 100 -------ERISKAMRLLEEGRAERLLISGVHPGSSARQ--IAQATSSDLPLFTCCVDLDR 150
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ----HFGINTKASC 203
+L+T NA ++S + + + +++V+SAYHL R++L + G+
Sbjct: 151 -----AALNTLGNATETASWVAEHEFETLLVVTSAYHLPRAELELAEVLPNAGLLPYPVF 205
Query: 204 SD--YLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
S L A+YS +F +L ++EY+ +A R
Sbjct: 206 SSERDLTAWYS------SFDTLKLLMREYVKYTLARLR 237
>gi|72162724|ref|YP_290381.1| hypothetical protein Tfu_2325 [Thermobifida fusca YX]
gi|71916456|gb|AAZ56358.1| similar to Uncharacterized membrane protein [Thermobifida fusca YX]
Length = 270
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 77/191 (40%), Gaps = 30/191 (15%)
Query: 36 IGWGIIPTILLKH-LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
IGW + T ++ L + +RP+ ++LG G T EP+
Sbjct: 70 IGWLHLTTAADRYTLGEAPERPVA-----------LVLGAGVT-------PEGEPTRLLE 111
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ LY+S + + +++SG + Q+H E+ V + L+ +GV I +
Sbjct: 112 RRLETAAELYRSGRVEA----LLVSGDNSQEH-YNETEVMYDYLVAAGVPAVKIARDYAG 166
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
T+++ + ++ +++ +V+ +HL R+ + G+ A+
Sbjct: 167 FSTWESCVRARAV---FGVESVTVVTQTFHLPRAVALCRAAGLEVVGVGDP---AWEDRA 220
Query: 215 PLSANFYLTEL 225
P Y E+
Sbjct: 221 PAMLYGYAREV 231
>gi|332715738|ref|YP_004443204.1| hypothetical protein AGROH133_10165 [Agrobacterium sp. H13-3]
gi|325062423|gb|ADY66113.1| hypothetical protein AGROH133_10165 [Agrobacterium sp. H13-3]
Length = 232
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 66/172 (38%), Gaps = 35/172 (20%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K + +++ + IG + + L L+ ++IV+LG
Sbjct: 36 KRNAILLGLMMLTAIGLYGLALVSAGSL-------LVVEDPPAQADVIVVLGG------- 81
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
R + +L+ + ++++G + + L+
Sbjct: 82 ----------DGPPRAAQAAKLWHEGR----APLVLVTGYG-------DCDFIRDMLVRL 120
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
GV+ + E SL T++NA F+ ++ M K+ ILV+S +H +R+ F+
Sbjct: 121 GVDSAVVSTECLSLSTWENATFAQPILTGMGAKSAILVTSWFHSRRAVKRFR 172
>gi|222055241|ref|YP_002537603.1| protein of unknown function DUF218 [Geobacter sp. FRC-32]
gi|221564530|gb|ACM20502.1| protein of unknown function DUF218 [Geobacter sp. FRC-32]
Length = 198
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 60/161 (37%), Gaps = 30/161 (18%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ + IV+L G RI E RLY+ + +
Sbjct: 38 NCDAIVVLAGGR------------------GRIEEGSRLYRENHARWLFLIGV------- 72
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ +S ++ + E + + LE S +T +NA ++ MI +I L++S YH
Sbjct: 73 DPSVRKSDLFRERKGERS--GEGVYLEKVSRNTLENALYAREMIVGRNIDSIELITSRYH 130
Query: 185 LKRSQLYFQHF---GINTKASCSDYLNAYYSIIPLSANFYL 222
+KR+ L F+H I D N S +F L
Sbjct: 131 MKRATLIFRHVLPKDIAIYPHPVDTKNLKEEWWNHSGSFRL 171
>gi|89068295|ref|ZP_01155705.1| hypothetical protein OG2516_02499 [Oceanicola granulosus HTCC2516]
gi|89046212|gb|EAR52270.1| hypothetical protein OG2516_02499 [Oceanicola granulosus HTCC2516]
Length = 212
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 21/172 (12%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+L G R R LY +H T G + G++
Sbjct: 42 VVLAGGMNGNQLGDGSR--------DRAEAAAELYTRGAVGHLHFT-----GSAARRGVS 88
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+ + + GV + +E +S T QNA FS + +++LV+ +HL R
Sbjct: 89 TAGLMADLARARGVPDGALSVEGESRSTLQNALFSRPAVARH--DHLLLVTEGFHLWRGA 146
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
G C +A+ P + + L+E + + RG+
Sbjct: 147 ASMAWAGTPVDGMCKS--SAFGDDDP----LEVARITLREALAWWLNIARGS 192
>gi|297160757|gb|ADI10469.1| integral membrane protein [Streptomyces bingchenggensis BCW-1]
Length = 229
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 51/141 (36%), Gaps = 16/141 (11%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ V+ G G EPS R+ T LY+ K + I+++G D
Sbjct: 53 PSAPVAVVFGAGLWN--------GEPSPYLAHRLDATAELYERGKIRA----ILVTG-DN 99
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+H E L+ GV I + DT+ + + + +LVS +
Sbjct: 100 SRHDYDEPDAMRAYLVRHGVPDQRIVSDYAGFDTWDSCSRAERI---FGVHRAVLVSQDF 156
Query: 184 HLKRSQLYFQHFGINTKASCS 204
H++R+ + GI+
Sbjct: 157 HIRRALALCEAAGIDAYGVGV 177
>gi|218709993|ref|YP_002417614.1| hypothetical protein VS_2012 [Vibrio splendidus LGP32]
gi|218323012|emb|CAV19189.1| hypothetical protein VS_2012 [Vibrio splendidus LGP32]
Length = 225
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 96 RIFE-TMRLYKSCKQHSMHCTIIISGGDPQ----KHGLAESIVYNNKLLESGVERDDIKL 150
R+ E LY + I+ SGG + +E+ + ++GV DI +
Sbjct: 51 RVAEYAAELYHQ----GVAPYIVFSGGLGRFTEGSFERSEAETFAAIARDAGVPDSDIII 106
Query: 151 ETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHF 195
E + +T +N +F+ ++ K + LV + KR+ F
Sbjct: 107 EKHATNTGENVRFTHKLLTERGLSPKRLTLVQKPFMEKRTYATFAKQ 153
>gi|89096104|ref|ZP_01168997.1| hypothetical protein B14911_25445 [Bacillus sp. NRRL B-14911]
gi|89088958|gb|EAR68066.1| hypothetical protein B14911_25445 [Bacillus sp. NRRL B-14911]
Length = 226
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 24/135 (17%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
KK G I +LG+ S + R+ + + LY S + ++ SG
Sbjct: 48 DDKKSGECIFVLGS---------------SKAAEYRLPKALELYNSGR----AGKLLFSG 88
Query: 121 GDPQ-KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN----MQGKN 175
G L E+ + K L G+ DI +E QSL T +N S ++ + K
Sbjct: 89 GVVWAPSRLCEAELLKEKALALGIPAADILIENQSLHTKENVLASLLVLDREFNLHKIKR 148
Query: 176 IILVSSAYHLKRSQL 190
I++V+++ H++R+ L
Sbjct: 149 ILVVTASCHIRRAYL 163
>gi|119486244|ref|ZP_01620303.1| hypothetical protein L8106_16359 [Lyngbya sp. PCC 8106]
gi|119456457|gb|EAW37587.1| hypothetical protein L8106_16359 [Lyngbya sp. PCC 8106]
Length = 238
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 69/196 (35%), Gaps = 23/196 (11%)
Query: 42 PTILLKHLQ-FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
P L +++ +Y R + + ++ G G T P RI
Sbjct: 30 PLALRSYVEASTYTRRYTNINQVPSKPVAIVFGAGVWEDGT-------PMPMLADRIQGA 82
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
+ LY + I+++G + E I E G+ +DIKL+ T+++
Sbjct: 83 IDLYHLGRVR----KILMTGDNATPE-YNEVIAMQYYAYEQGIPLEDIKLDYAGFSTYES 137
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANF 220
+ + + +L++ YHL R+ GIN + + S F
Sbjct: 138 CYRAREI---FGIQQAVLITQQYHLSRAVYTCNQLGINAVGYGTP---DWGKYQDESMRF 191
Query: 221 YLTELALKEYIGILIA 236
Y +E + I+ A
Sbjct: 192 YTQ----REMLAIIKA 203
>gi|253699685|ref|YP_003020874.1| hypothetical protein GM21_1055 [Geobacter sp. M21]
gi|251774535|gb|ACT17116.1| protein of unknown function DUF218 [Geobacter sp. M21]
Length = 195
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 71/193 (36%), Gaps = 38/193 (19%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIVLLGNGTTIIPTIPA 84
M+ +LFS I ++ I+L L + S Q + IV+L G
Sbjct: 1 MALLKVLFSLI---VLILIVLSVLFVDFVYKTFSLSQRDVKTDAIVVLTGGR-------- 49
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
R+ E ++LY+ + + + + L G
Sbjct: 50 ----------GRVEEGVKLYRGGRGKLLFLIGV-------------DPLVKKHELYRGAG 86
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF---GINTKA 201
+++ LE S +T +NA ++ MI + +I L++S YH+KRS + F++ I
Sbjct: 87 AENVYLEKTSRNTLENAIYARDMITKHRVSSIKLITSRYHMKRSTILFRNALPKDIAIYP 146
Query: 202 SCSDYLNAYYSII 214
D N
Sbjct: 147 HPVDSSNLKEEWW 159
>gi|329930281|ref|ZP_08283883.1| hypothetical protein HMPREF9412_2885 [Paenibacillus sp. HGF5]
gi|328935150|gb|EGG31634.1| hypothetical protein HMPREF9412_2885 [Paenibacillus sp. HGF5]
Length = 202
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL-AESIVYNNKLLESGVERDDIKLET 152
R+++ + LY + I+ +GGD E+ + ++ + G+ + I +ET
Sbjct: 45 LDRVWKAVELYNIGRAPY----ILFTGGDRFGEWEQTEAAMMRDEAMRMGIPAEAILMET 100
Query: 153 QSLDTFQNAQFSSSMIKNM----QGKNIILVSSAYHLKRSQLYFQHF 195
S T +N S ++ + + I+LVS+ H++R QL + F
Sbjct: 101 MSNHTKENIMASLIVLDRALGLERIQRILLVSAPGHMRRCQLMLKTF 147
>gi|54302360|ref|YP_132353.1| hypothetical protein PBPRB0680 [Photobacterium profundum SS9]
gi|46915782|emb|CAG22553.1| hypothetical protein PBPRB0680 [Photobacterium profundum SS9]
Length = 217
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 96 RIFE-TMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKL 150
R+ E ++Y + I+ SGG+ + G +E+ + + + GV + I +
Sbjct: 37 RVAEHAAKIYLA----GYAPYIVFSGGEGELTKGLFGCSEAEYFAHVAADMGVPLEKILI 92
Query: 151 ETQSLDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
E QS +T +N QF+ ++ K++ +ILV + +R+ F
Sbjct: 93 EPQSTNTGENVQFTRELLESKDLTPNKMILVQKPFMERRTFATFVRQ 139
>gi|256787907|ref|ZP_05526338.1| integral membrane protein [Streptomyces lividans TK24]
Length = 207
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 49/141 (34%), Gaps = 16/141 (11%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ V+ G G EPS R+ LY++ + ++++G D
Sbjct: 33 PRTEVAVVFGAGLWD--------GEPSPYLAHRLDAAAELYRAGR----IAVVLVTG-DN 79
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ E L+ GV I + DT+ + + + +L+S +
Sbjct: 80 SREEYDEPDAMRAYLVRHGVPDGRIVSDYAGFDTWDSCVRAKKI---FGVDRAVLISQGF 136
Query: 184 HLKRSQLYFQHFGINTKASCS 204
H++R+ Q G+ +
Sbjct: 137 HIRRAVALCQEAGVASYGVGV 157
>gi|254382897|ref|ZP_04998253.1| integral membrane protein [Streptomyces sp. Mg1]
gi|194341798|gb|EDX22764.1| integral membrane protein [Streptomyces sp. Mg1]
Length = 235
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 16/141 (11%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ V+ G G P + +R+ LY++ K +++ GD
Sbjct: 60 PSAEVAVVFGAGLWNGRPTPYL--------ANRLDAAAELYRAGKV-----KVVLVSGDN 106
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ G E L GV + I + DT+ + + + +L+S +
Sbjct: 107 SRTGYDEPDAMRTYLTAHGVPGERIVSDFAGFDTWDSCVRAKEI---FGVHRAVLISQGF 163
Query: 184 HLKRSQLYFQHFGINTKASCS 204
H+ R+ + G+++
Sbjct: 164 HIHRAVALCEAAGVDSYGVGV 184
>gi|167625319|ref|YP_001675613.1| hypothetical protein Shal_3408 [Shewanella halifaxensis HAW-EB4]
gi|167355341|gb|ABZ77954.1| protein of unknown function DUF218 [Shewanella halifaxensis
HAW-EB4]
Length = 166
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP---Q 124
+I++LG+ + + S + SR + Y+ Q ++++GG
Sbjct: 4 VIIVLGS-------PNDDQGKLSDIALSRCQAALATYQKQPQS----KLLLTGGFGAHFN 52
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ ++ L++ GV D S TF++A + +I+ + I LV+S +H
Sbjct: 53 QTTTPHALYCQRYLIKHGVLADAFTDIALSRFTFEDATLAKPIIEQHRFNEITLVTSEFH 112
Query: 185 LKRSQLYF 192
++R++L F
Sbjct: 113 MQRAKLIF 120
>gi|84391755|ref|ZP_00991657.1| hypothetical protein V12B01_03238 [Vibrio splendidus 12B01]
gi|84376468|gb|EAP93347.1| hypothetical protein V12B01_03238 [Vibrio splendidus 12B01]
Length = 194
Score = 70.7 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 96 RIFE-TMRLYKSCKQHSMHCTIIISGGDPQ----KHGLAESIVYNNKLLESGVERDDIKL 150
R+ E LY + I+ SGG + +E+ + ++GV DI +
Sbjct: 20 RVAEYAAELYHQ----GVAPYIVFSGGVGRFTEGSFERSEAETFAAIARDAGVPDSDIII 75
Query: 151 ETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHF 195
E + +T +N +F+ ++ K + LV + KR+ F
Sbjct: 76 EKHATNTGENVRFTHELLTERGLSPKRLTLVQKPFMEKRTYATFSKQ 122
>gi|297193393|ref|ZP_06910791.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
gi|197718291|gb|EDY62199.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 200
Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
T LY+ + T S + E+ Y + +E GV D I +E ++ +T +
Sbjct: 21 TADLYRQGMAPVVVFTGATSRTTHDRMPRGEAEHYRERAVELGVPNDAILVEPRARNTGE 80
Query: 160 NAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHF 195
N +FS ++++ +++LVS Y +R+ +
Sbjct: 81 NIRFSRALLEEQGIPVSSVLLVSKPYEERRAYATARKL 118
>gi|255994503|ref|ZP_05427638.1| putative SanA protein [Eubacterium saphenum ATCC 49989]
gi|255993216|gb|EEU03305.1| putative SanA protein [Eubacterium saphenum ATCC 49989]
Length = 243
Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/235 (16%), Positives = 85/235 (36%), Gaps = 31/235 (13%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQW-------KKDGN 67
I ++ L I G I + ++ + ++ K+
Sbjct: 23 FFKSIFISIVALALISGLIVAIPNGYIILSTMNDIKLNVTTKKINADEAKLKEIKKQKPE 82
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I ++LG G PS R+ LYK + + I+++G D +
Sbjct: 83 IAMVLGAGIINN-------NRPSKILKDRLNIAASLYK----NKIVKKILLTG-DGRNKN 130
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ V + +++ + + ++++ + T+++ ++S+ K K ++++ YHL R
Sbjct: 131 HDETQVMYDYIIKKRIPPEALQIDPYGISTYESMARAASIYK---IKRPVIITQRYHLYR 187
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGNR 242
S + G+ S+ A S+ +E I + + G R
Sbjct: 188 SLYLGKCTGMKCIGIGSNQSRASKLYTIFSS---------RETIARIKDFATGIR 233
>gi|262394606|ref|YP_003286460.1| hypothetical protein VEA_003835 [Vibrio sp. Ex25]
gi|262338200|gb|ACY51995.1| hypothetical protein VEA_003835 [Vibrio sp. Ex25]
Length = 212
Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 11/107 (10%)
Query: 96 RIFE-TMRLYKSCKQHSMHCTIIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKL 150
R+ E LY + I+ SGG+ + +E+ + SGV + I L
Sbjct: 35 RVAEHAANLYHQ----KLAPLIVFSGGEGRFTDGLFEKSEAETFAEIAKMSGVPSEAILL 90
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHF 195
E +S ++ +N +F+ +K + ILV + +R+ F+
Sbjct: 91 EAESTNSGENVRFTEQRLKEEGKHCSSFILVQKPFMERRAIATFEKQ 137
>gi|295134706|ref|YP_003585382.1| hypothetical protein ZPR_2866 [Zunongwangia profunda SM-A87]
gi|294982721|gb|ADF53186.1| secreted protein containing DUF218 [Zunongwangia profunda SM-A87]
Length = 209
Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 19/178 (10%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ I + ++L FI G+ I Y P K IVL + +
Sbjct: 6 KSILYTVILIVLGIFITLGLEAFIKQDIASRMYAEINEVPSAK---TAIVLGASVHSDGK 62
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P ++ R+ + L K K I+ISG D E N L E
Sbjct: 63 LSPILQ--------DRVDTAIDLLKHHKVEE----ILISG-DHGSDDYNEVDAIANYLTE 109
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+G+ D + L+ DT+ + +S + K+ I+++ +HL R+ +H G++
Sbjct: 110 NGIPSDILILDHAGFDTYDSMYRASKV---FNIKDAIVITQQFHLPRALFIAKHLGLD 164
>gi|255018930|ref|ZP_05291056.1| hypothetical protein LmonF_16526 [Listeria monocytogenes FSL
F2-515]
Length = 98
Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 12/85 (14%)
Query: 156 DTFQNAQFSSSMIKN-MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
+T QN +FS + + M N + ++ +HL R+ +Y + G+ ++ +
Sbjct: 1 NTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLYRAGIYARKAGLKSQGIGA---------- 50
Query: 215 PLSANFYLTELALKEYIGILIAYYR 239
+A +Y+ ++E+I I + Y +
Sbjct: 51 -KTALYYMPNALIREFIAITVMYKK 74
>gi|227823233|ref|YP_002827205.1| hypothetical protein NGR_c27030 [Sinorhizobium fredii NGR234]
gi|227342234|gb|ACP26452.1| hypothetical protein NGR_c27030 [Sinorhizobium fredii NGR234]
Length = 242
Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/225 (17%), Positives = 82/225 (36%), Gaps = 41/225 (18%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +R+ FF+ L G+ + LQ P + IV+L G
Sbjct: 33 KILRRGFFVLLAFLAVFVAGFLYFADT-VASLQ---------PPAAPKADAIVVLTGGFQ 82
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII---ISGGDPQKHGLAESIVY 134
RI + + L KS + + + + +G +++ + +
Sbjct: 83 ------------------RIEQAVELLKSGAGNRLLISGVNPATTGSQIRRNTQSSAD-- 122
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L + V+ +++DT NA + I + +++++V++ YH+ RS L +
Sbjct: 123 ---LFKCCVDIGH-----EAVDTIGNATEAGQWIHDHGYRSVLVVTNNYHMPRSLLELRR 174
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+T+ +N+ N + L EY IA+ R
Sbjct: 175 VRPDTEFIAYPVVNSDLKTSNWLRNPRFIKAILLEYAKYSIAFLR 219
>gi|227486973|ref|ZP_03917289.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227541865|ref|ZP_03971914.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227093047|gb|EEI28359.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227182308|gb|EEI63280.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 150
Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 19/158 (12%)
Query: 87 IEPSFQSYSRIFETM-------RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ P SR+ + + RL + + + T++++G + E+ + L+
Sbjct: 1 MRPLVVLGSRLIDGLPGTTLTRRLVAAREHITPATTVVVTGHNG------EAEAMRDWLV 54
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV+ I +E ++ T +N + + + + +V+S +H R +++ H +
Sbjct: 55 AHGVDASHIIVEPEARSTNENLENAYHALG--RATRFDVVTSDFHAPRVRMWAWHHQFDV 112
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
+ I L + AL+ IL
Sbjct: 113 SVITAPTPADRRLFIYLRELAAIPHSALR----ILWRR 146
>gi|307324821|ref|ZP_07604027.1| protein of unknown function DUF218 [Streptomyces violaceusniger Tu
4113]
gi|306889703|gb|EFN20683.1| protein of unknown function DUF218 [Streptomyces violaceusniger Tu
4113]
Length = 231
Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 68/203 (33%), Gaps = 27/203 (13%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
+L W+ + + + + + C + L + ++ + P+
Sbjct: 1 MLGWVRRRLPRTRRGWRRLVQGGVLVCVLALLPATWLRLSTDDRIRTVADVPSAPVG--- 57
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
V+ G G EPS R+ +RLYK + H++ T G
Sbjct: 58 --------VVFGAGLWN--------GEPSPYLAHRLDAAVRLYKDGRVHALLVT-----G 96
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
D +H E L++ GV I + DT+ + + + +LVS
Sbjct: 97 DNSRHDYDEPDAMRAYLVKRGVPDRRIVSDFAGFDTWDSCSRARRV---FGVHKAVLVSQ 153
Query: 182 AYHLKRSQLYFQHFGINTKASCS 204
+H++R+ GI+
Sbjct: 154 GFHVRRALALCGAAGIDAYGVAV 176
>gi|255084371|ref|XP_002508760.1| predicted protein [Micromonas sp. RCC299]
gi|226524037|gb|ACO70018.1| predicted protein [Micromonas sp. RCC299]
Length = 325
Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 57/152 (37%), Gaps = 19/152 (12%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
Q P + +V++ G T +P + SR+ + Y+ +
Sbjct: 75 QFPSTDVPSDAFYDAVVVVAGGMTDSGGLPPWVV-------SRLDHAVDEYRRHVTATPP 127
Query: 114 CT--IIISGGDPQKHGLA---------ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
+++SG ES ++ +GV + +T S+DT NA
Sbjct: 128 KKMYVVLSGSATPHKPPPLQKGGFMLHESTAMAEYVVAAGVPPQAVLKDTASMDTIGNAY 187
Query: 163 FSSSM-IKNMQGKNIILVSSAYHLKRSQLYFQ 193
+S ++ + + +V+S +H R++ F+
Sbjct: 188 YSLTLHAAPRNWRRVQVVTSEFHAGRTRAAFE 219
>gi|328882308|emb|CCA55547.1| SanA protein [Streptomyces venezuelae ATCC 10712]
Length = 238
Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 51/163 (31%), Gaps = 16/163 (9%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
++ V+ G G P + R+ LY+S K +++ GD
Sbjct: 52 PARDVAVVFGAGLWNGRPTPYL--------AHRLDTAAELYRSGKVR-----VLLVTGDN 98
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ E L GV I + DT+ + + + +LV+ +
Sbjct: 99 SRTAYDEPSAMRAYLTARGVPDTRIVSDYAGFDTWDSCVRARKV---FGVDRAVLVTQDF 155
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
H+KR+ G+++ + + + A
Sbjct: 156 HIKRAVALCGRAGVDSYGVGVPEPHDRTWYYGTTRELFAAGKA 198
>gi|260578004|ref|ZP_05845927.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
43734]
gi|258603831|gb|EEW17085.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
43734]
Length = 314
Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 27/163 (16%)
Query: 43 TILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
+ +LK L+ + P + + +V+LGNG P + P+ Q +
Sbjct: 105 SHILKVLEAPVKAPGKATNPRAT---VVVLGNGLN-----PDGSVHPNLQ------RRLE 150
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
+ + II SGG +HG E+ L+ +G+ I +E S T NA
Sbjct: 151 VARDYALRHPASPIITSGGK-TEHGHVEAESMKRWLVRAGISPQRIHVEGNSWSTISNAW 209
Query: 163 FSSSMIKNMQ------------GKNIILVSSAYHLKRSQLYFQ 193
S+ + M + +++ ++ HL R ++
Sbjct: 210 HSAKVFGKMNEQAKNAPHGKPLPRELVIATTDSHLHRGVSDYR 252
>gi|209694358|ref|YP_002262286.1| hypothetical protein, putative phage gene [Aliivibrio salmonicida
LFI1238]
gi|208008309|emb|CAQ78460.1| putative exported protein, putative phage gene [Aliivibrio
salmonicida LFI1238]
Length = 337
Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
SR+ + L + II+SG +K+ + E+ + L + G+E + E++S
Sbjct: 133 SRLNQAYTLA----IKYPNMPIILSG-KGRKNNVIEADYMYDYLKDKGIETKRMYKESES 187
Query: 155 LDTFQNAQFSSSMIKNMQ----GKNIILVSSAYHLKRSQLYFQH 194
LDT NA+FS I+ KN +++++ YH RS F
Sbjct: 188 LDTVGNAEFSYFTIQENPSLNKIKNWLVITNNYHAMRSLFNFSR 231
>gi|302551238|ref|ZP_07303580.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
gi|302468856|gb|EFL31949.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
Length = 228
Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 60/189 (31%), Gaps = 27/189 (14%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + + +C + L ++ + P+ ++ V+ G G
Sbjct: 18 QRRLVQAVMGACVLALLPAAWMYVVA-------GDRLRTAAEVPR----TDVAVVFGAGL 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
EPS R+ LY+ + +++ GD + E
Sbjct: 67 WD--------GEPSPYLAHRLDAAAGLYREGRVE-----VVLVTGDNSREDYDEPDAMRA 113
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L GV I + DT+ + + + +L+S +H++R+ Q G
Sbjct: 114 YLTRHGVPDRRIVSDYAGFDTWDSCVRAKKI---FGVDEAVLISQGFHIRRAVALCQAAG 170
Query: 197 INTKASCSD 205
+ + D
Sbjct: 171 VESYGVGVD 179
>gi|295838336|ref|ZP_06825269.1| SanA protein [Streptomyces sp. SPB74]
gi|197695869|gb|EDY42802.1| SanA protein [Streptomyces sp. SPB74]
Length = 229
Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 70/196 (35%), Gaps = 22/196 (11%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI-----IVLLGNGTTIIPTIPAIRIEPSFQ 92
W ++ +L L ++ R + + ++ V+ G G PS
Sbjct: 24 WAVMALCVLALLPSAWIRVASGGAVRDEADVDPAPVAVVFGAGLRD--------GRPSPY 75
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
R+ RLY + + + ++++G D + G E + L +GV + +
Sbjct: 76 LAHRLDVAARLYAAGRVSA----VLVTG-DHGRAGYDEPTAMRDYLARAGVPGRQVVWDH 130
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS-DYLNAYY 211
DT+ + + + +LVS +H++R+ + G+ + + D + +
Sbjct: 131 AGFDTWDSCVRARRV---FGVDRAVLVSQGFHIRRAVALCRAAGVEAQGVAARDPRDVTW 187
Query: 212 SIIPLSANFYLTELAL 227
+ AL
Sbjct: 188 YYGASQEILAAPKAAL 203
>gi|261211816|ref|ZP_05926103.1| hypothetical protein VCJ_002079 [Vibrio sp. RC341]
gi|260839166|gb|EEX65798.1| hypothetical protein VCJ_002079 [Vibrio sp. RC341]
Length = 208
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 27/138 (19%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q K ++I++LG+ + +LY + ++ SG
Sbjct: 16 QQPKPADVILVLGSNDLRVAE-----------------HAAKLYHQ----GLAPRVLFSG 54
Query: 121 GDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGK 174
G + E+ + E+GV + + LETQS ++ +N FS ++ + +
Sbjct: 55 GLGRFTQGVFEQTEAETFAAIAKEAGVPEEALLLETQSTNSGENMLFSHQVLTQQAHPAQ 114
Query: 175 NIILVSSAYHLKRSQLYF 192
I+L+ Y +R+ F
Sbjct: 115 RILLLQKPYMERRAYATF 132
>gi|326441038|ref|ZP_08215772.1| putative integral membrane protein [Streptomyces clavuligerus ATCC
27064]
Length = 204
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 51/148 (34%), Gaps = 16/148 (10%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ + + ++ ++ G G + P+ R+ LY+ K +
Sbjct: 22 VHAAEDVPAQDVALVFGAGL--------WQGRPTPYLAHRLDTAADLYRRGKV-----KV 68
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I+ GD + E L+ GV I + D++ + + +
Sbjct: 69 ILVTGDNSREEYDEPDAMRTYLVGRGVPERRIVSDHAGFDSWDSCVRAKEI---FGVDRA 125
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCS 204
+LVS +H++R+ + GI +
Sbjct: 126 VLVSQGFHIRRAVALCRTAGIESYGVGV 153
>gi|227548113|ref|ZP_03978162.1| transporter [Corynebacterium lipophiloflavum DSM 44291]
gi|227079775|gb|EEI17738.1| transporter [Corynebacterium lipophiloflavum DSM 44291]
Length = 190
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 51/125 (40%), Gaps = 17/125 (13%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG R+ P + + + + + + I+++GG Q
Sbjct: 59 IVVLGA-----------RLNPDCSAPAVLNDRLATARGVALLHPANPIVVTGGHTQPGCQ 107
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI----ILVSSAYH 184
AE+ + L+ + V+ I ++T + T NA ++ N+ +LV+S H
Sbjct: 108 AEAEYMRDFLVGTFVDPSRISMDTSAYSTVGNALATAD--SAGSSANVMPVGVLVTSPNH 165
Query: 185 LKRSQ 189
+ R+
Sbjct: 166 IPRAI 170
>gi|115374286|ref|ZP_01461571.1| SanA protein [Stigmatella aurantiaca DW4/3-1]
gi|115368707|gb|EAU67657.1| SanA protein [Stigmatella aurantiaca DW4/3-1]
Length = 212
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 67/196 (34%), Gaps = 23/196 (11%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ +L +R+ LL L + +Q Y +L Q + +
Sbjct: 1 MGRRGVLGVWMRRGVLAGALSLLGVLA--------LSRFVQVRYADRILPRQGAPEAPMA 52
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++ G G A PS R+ + L++ K +++SG D
Sbjct: 53 LVFGAGL-------APGGVPSPVLAQRLDTAIALWREKKVGG----VLVSG-DNSDRFHD 100
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E+ LLE G+ ++ + L T+ + + +LV+ +HL R+
Sbjct: 101 ETRAMRRYLLERGLPETAVQGDNSGLSTYDS---CVRAYDVFGMRRALLVTQRFHLPRAL 157
Query: 190 LYFQHFGINTKASCSD 205
G++ +D
Sbjct: 158 YIANSVGMDAWGVAAD 173
>gi|38233272|ref|NP_939039.1| hypothetical protein DIP0665 [Corynebacterium diphtheriae NCTC
13129]
gi|38199531|emb|CAE49182.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length = 153
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 69/171 (40%), Gaps = 28/171 (16%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
I++LG+ +R R+ + L + I++SG
Sbjct: 8 ILVLGSKVRGAQPGHVLRW--------RLEHALELSRHTTG-----PIVVSGKG------ 48
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ V ++ L+ GV+ + +E ++ T +N + + +++ + ++V+S +H R+
Sbjct: 49 -EAYVMDDWLIRHGVDYRRLIVEPEATSTNENIENAHALLPDTH--EWLVVTSDFHKLRT 105
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ +H G+ + S + + + F L L+ IA+ R
Sbjct: 106 LAWARHLGVPIRVSSAVTKPPFRVNNFVRECFALPHSLLR------IAWRR 150
>gi|331698228|ref|YP_004334467.1| hypothetical protein Psed_4458 [Pseudonocardia dioxanivorans
CB1190]
gi|326952917|gb|AEA26614.1| protein of unknown function DUF218 [Pseudonocardia dioxanivorans
CB1190]
Length = 205
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 58/173 (33%), Gaps = 18/173 (10%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ +++LG PS +R+ LY+ + I+ GG+
Sbjct: 37 PADAVIVLGAAQYD--------GNPSPIFAARLDHAAALYRQ----GLAPRIVTVGGNRA 84
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E+ LL GV + + DT + Q +++ + ILVS +H
Sbjct: 85 GDEYTEASAGRRYLLAKGVPAAAVVAVGEGSDTLASLQAVAAVARTGGWHTAILVSDPWH 144
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
R++ + G++ S + S + ++E +L
Sbjct: 145 SLRARTMAEDSGLDAWTSPTRSGPVVQSRETQARYI------VRETGALLFYR 191
>gi|27366184|ref|NP_761712.1| hypothetical protein VV1_2906 [Vibrio vulnificus CMCP6]
gi|27362384|gb|AAO11239.1| hypothetical protein VV1_2906 [Vibrio vulnificus CMCP6]
Length = 212
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQ-KHGL---AESIVYNNKLLESGVERDDIKLETQS 154
LYK I+ SGG+ + GL +E+ + SGV + I LET+S
Sbjct: 39 HAANLYKQ----GYAPYILFSGGEGRFTEGLFEKSEAETFAELAKASGVPEEAILLETKS 94
Query: 155 LDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
++ +N +FS ++ K + ++ ILV + +R+ F+
Sbjct: 95 SNSGENVRFSEQLLIDKGLVFESFILVQKPFMERRALATFEKQ 137
>gi|296130901|ref|YP_003638151.1| protein of unknown function DUF218 [Cellulomonas flavigena DSM
20109]
gi|296022716|gb|ADG75952.1| protein of unknown function DUF218 [Cellulomonas flavigena DSM
20109]
Length = 231
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 52/150 (34%), Gaps = 17/150 (11%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ P + +++LG G PS R+ + LY+ +
Sbjct: 68 VPDPADVSERPTVLVLGAGL-------RPGGVPSPYLQRRLDAAVDLYERGVVE----RV 116
Query: 117 IISGG-DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
++SG H + LL +GV + I + +DT A + +
Sbjct: 117 LVSGDRSGPDHDEPGA--MRAHLLAAGVPDEAIARDDAGVDTH--ASCVRAH-EEFDVDA 171
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSD 205
++V+ YHL+R+ + GI+
Sbjct: 172 AVVVTQDYHLRRALFSCRAAGIDAVGIGVS 201
>gi|220921160|ref|YP_002496461.1| hypothetical protein Mnod_1152 [Methylobacterium nodulans ORS 2060]
gi|219945766|gb|ACL56158.1| protein of unknown function DUF218 [Methylobacterium nodulans ORS
2060]
Length = 245
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/239 (14%), Positives = 78/239 (32%), Gaps = 52/239 (21%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + R++ ++ S + +G+ + L + ++P + IV L
Sbjct: 19 AIRARPWRRLVLTLAALVGASGLAFGVGFLAFVGCLARTERQP------HAPADGIVALT 72
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G RI + + L + + T + + +
Sbjct: 73 GG------------------AQRIGDAIDLLAAGYGRRLLITGV-------NERTSREEI 107
Query: 134 YN-----NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
L+ V+ L+ ++ +T NA + ++ + + +V+S YH+ R+
Sbjct: 108 ARLNPGQQHLIACCVD-----LDYRARNTIGNAIETRRWMRENGFRTVAVVTSNYHMPRT 162
Query: 189 QLYFQHF---GINTKASCS---DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
L H G + + P SA ++ EY+ L+A+ R
Sbjct: 163 LLELGHALADGNRVVPHPVVHDGFDPDAWWHHPASARLLVS-----EYVKFLVAWIRTR 216
>gi|312883139|ref|ZP_07742870.1| hypothetical protein VIBC2010_07619 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369299|gb|EFP96820.1| hypothetical protein VIBC2010_07619 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 265
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 25/131 (19%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH--CTIIISGGDPQKH 126
I++LG+ P R RL + K II+SG +K
Sbjct: 51 IIVLGS-------------TPGKGILER-----RLDDAYKMAEEDKSLPIILSG-KGRKE 91
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ----GKNIILVSSA 182
+ E+ N L+ G+ + + E+ SLDT NA+FS I + ++ +++++
Sbjct: 92 DVVEADYMYNYLIRKGLNGERLYKESLSLDTVGNAEFSYFTITENESLKDIRDWLVITNN 151
Query: 183 YHLKRSQLYFQ 193
+H RS FQ
Sbjct: 152 FHAMRSLNTFQ 162
>gi|312140170|ref|YP_004007506.1| hypothetical protein REQ_28070 [Rhodococcus equi 103S]
gi|311889509|emb|CBH48826.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length = 172
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 8/127 (6%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
P R+ T RL + K +++SG + G E+ L+E GV R
Sbjct: 10 RPMKFLQGRLDTTARLVRDGKV----AVVLVSGDAHGRSGD-ETAAMVEYLVEVGVPRTS 64
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I + LDT+ ++ +N + V+ +HL R+ + GI +
Sbjct: 65 IVADPYGLDTYDTCVRAAE---TFGIRNALFVTQPFHLPRTVALARAAGIEAHGVYAGRA 121
Query: 208 NAYYSII 214
S +
Sbjct: 122 GGRRSTL 128
>gi|189346479|ref|YP_001943008.1| hypothetical protein Clim_0953 [Chlorobium limicola DSM 245]
gi|189340626|gb|ACD90029.1| protein of unknown function DUF218 [Chlorobium limicola DSM 245]
Length = 197
Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 67/166 (40%), Gaps = 27/166 (16%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K FF + + S + + + L F+ P P+ ++IV+LG
Sbjct: 3 KAFFRYLSIFILSVV---TVTAAVFLSLGFAVSYPAQKPE---KADVIVVLGG------- 49
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
R+ + LY + ++++G D + + ++ +
Sbjct: 50 ----------DDGLRVEKGAELY----NNGFAPNVLLTGIDARFYRPGRPNWRERRMRDL 95
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
GV + I+++T+S T++ A +S ++ + ++ I+VS H+ R
Sbjct: 96 GVPKKAIRVDTESETTWEEAVNASETLQKQKWESAIVVSDPPHMLR 141
>gi|150397743|ref|YP_001328210.1| hypothetical protein Smed_2545 [Sinorhizobium medicae WSM419]
gi|150029258|gb|ABR61375.1| protein of unknown function DUF218 [Sinorhizobium medicae WSM419]
Length = 232
Score = 69.9 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 81/219 (36%), Gaps = 45/219 (20%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+RK+ S F+LL + + LQF+ L P + IV+L G
Sbjct: 21 LRKLLRRSFFVLL------AFLAVFIAGFLQFADTVASLQPPPTPKADAIVVLTGGFQ-- 72
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG-------GDPQKHGLAESI 132
RI + + L K ++ISG +++ + +
Sbjct: 73 ----------------RIDQAVDLLK----LGAGKRLLISGVHPSTTRSQIRRNTQSSAD 112
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
L + V+ +++DT NA +S I++ + I++V++ YH+ RS L
Sbjct: 113 -----LFKCCVDIGR-----EAVDTIGNATETSHWIRSRGYRTILVVTNNYHMPRSLLEL 162
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
+ T+ +N+ N + + L EY+
Sbjct: 163 RRARPETEFVAYPVVNSDLKTTNWLRNPLVLKAILLEYV 201
>gi|320084338|emb|CBY94131.1| Uncharacterized protein ygjQ [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 118
Score = 69.9 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 46/107 (42%), Gaps = 12/107 (11%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ ++ G G + PS +R+ + LY+ + ++++GG
Sbjct: 24 ADCAIVAGAGVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAG 71
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++++ + +LE G+ I +E +S T +N +++ +++
Sbjct: 72 ATVSDAAIARQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQH 118
>gi|68535901|ref|YP_250606.1| hypothetical protein jk0826 [Corynebacterium jeikeium K411]
gi|68263500|emb|CAI36988.1| hypothetical protein jk0826 [Corynebacterium jeikeium K411]
Length = 314
Score = 69.9 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 27/163 (16%)
Query: 43 TILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
+LK L+ + P + + +V+LGNG + P+ Q +
Sbjct: 105 NHILKVLEAPVKAPGKATSPRAT---VVVLGNGLNAD-----GSVHPNLQ------RRLE 150
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQ 162
+ + II SGG +HG E+ L+ +GV I +E S T NA
Sbjct: 151 VARDYALRHPASPIITSGGK-TEHGHVEAESMKRWLVRAGVSPRRIHVEGNSWSTISNAW 209
Query: 163 FSSSMIKNMQ------------GKNIILVSSAYHLKRSQLYFQ 193
S+ + M + +++ ++ HL R ++
Sbjct: 210 HSAKVFGKMNEQANNATYDKALPRELVIATTDSHLHRGVSDYR 252
>gi|320156696|ref|YP_004189075.1| hypothetical protein VVM_03432 [Vibrio vulnificus MO6-24/O]
gi|319932008|gb|ADV86872.1| hypothetical protein VVMO6_01850 [Vibrio vulnificus MO6-24/O]
Length = 212
Score = 69.9 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQ-KHGL---AESIVYNNKLLESGVERDDIKLETQS 154
LYK I+ SGG+ + GL +E+ + SGV + I LET+S
Sbjct: 39 HAANLYKQ----GYAPYILFSGGEGRFTEGLFEKSEAETFAELAKASGVPAEAILLETKS 94
Query: 155 LDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
++ +N +FS ++ K + ++ ILV + +R+ F+
Sbjct: 95 SNSGENVRFSEQLLIDKGLVFESFILVQKPFMERRALATFEKQ 137
>gi|254224848|ref|ZP_04918463.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|125622536|gb|EAZ50855.1| conserved hypothetical protein [Vibrio cholerae V51]
Length = 215
Score = 69.9 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 28/161 (17%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L + ++ + L Q ++I++LG+ +
Sbjct: 1 MSKHLYQQIETLWDYLQLHQQPDV-ADLILVLGSNDVRVAE-----------------HA 42
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLD 156
+LY + ++ SGG + +E+ + ++GV I LETQS +
Sbjct: 43 AKLYHQ----GLAPYVLFSGGFGRFTQGVFNHSEAETFAAIAKDAGVPEHAILLETQSTN 98
Query: 157 TFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ +N FS ++ + K I+LV Y +R+ F
Sbjct: 99 SGENLHFSHQLLVQQARPAKRILLVQKPYMERRAYATFMQQ 139
>gi|38234275|ref|NP_940042.1| hypothetical protein DIP1704 [Corynebacterium diphtheriae NCTC
13129]
gi|38200538|emb|CAE50233.1| Putative secreted protein [Corynebacterium diphtheriae]
Length = 225
Score = 69.9 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 22/173 (12%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+K IV+LG PS Q +R+ + + + ++ GG
Sbjct: 34 RKRFPTIVVLG--------TAQYDGVPSRQFAARLKWAAEQWHTQRSQ----KVVTVGGK 81
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ E+ V L++ V+ D I Q DT + + + S ++ I++++
Sbjct: 82 LPEDRFTEAAVAREYLIKEHVDSDLIVAVEQGHDTRGSLRAALSELEQ----PILIITDP 137
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
H R++L + GI AS + Y + P ++ + E G+ +
Sbjct: 138 NHSLRAELIARSEGIAAWASSTPYCP---TTFPRWQWWWT---FVHEQGGLCV 184
>gi|84494933|ref|ZP_00994052.1| conserved membrane-associated protein (OmpA family protein)
[Janibacter sp. HTCC2649]
gi|84384426|gb|EAQ00306.1| conserved membrane-associated protein (OmpA family protein)
[Janibacter sp. HTCC2649]
Length = 226
Score = 69.9 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 16/133 (12%)
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G PS +R+ LY K +++ GD + H E
Sbjct: 56 VLGAGLQ--------GGRPSPFLGARLDAAKELYDGGKV-----KVLLVSGDNRTHAYDE 102
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ L+ +GV + I L+ DT+ + Q + + + ++S YH+ R+
Sbjct: 103 PTAMRDYLVAAGVPTEAIVLDFAGRDTYDSCQRAHRI---FGVDKVTVISQGYHVGRAVA 159
Query: 191 YFQHFGINTKASC 203
+ G+ T
Sbjct: 160 LCRAAGMTTDGVG 172
>gi|153213889|ref|ZP_01949091.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|254285360|ref|ZP_04960325.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|124115627|gb|EAY34447.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|150424632|gb|EDN16568.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
Length = 215
Score = 69.9 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 28/161 (17%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L + ++ + L Q ++I++LG+ +
Sbjct: 1 MSKRLYQQIETLWDYLQLHQQPDV-ADLILVLGSNDVRVAE-----------------HA 42
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLD 156
+LY + ++ SGG + +E+ + ++GV I LETQS +
Sbjct: 43 AKLYHQ----GLAPYVLFSGGFGRFTQGVFNHSEAETFAAIAKDAGVPEHAILLETQSTN 98
Query: 157 TFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ +N FS ++ + K I+LV Y +R+ F
Sbjct: 99 SGENLHFSHQLLVQQARPAKRILLVQKPYMERRAYATFMQQ 139
>gi|156974135|ref|YP_001445042.1| hypothetical protein VIBHAR_01847 [Vibrio harveyi ATCC BAA-1116]
gi|156525729|gb|ABU70815.1| hypothetical protein VIBHAR_01847 [Vibrio harveyi ATCC BAA-1116]
Length = 212
Score = 69.5 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 45/104 (43%), Gaps = 6/104 (5%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKLETQ 153
+ I+ SGG+ + +E+ + +GV + I +ETQ
Sbjct: 34 LRVAEYAAKLYHQKLAPLIVFSGGEGRFTDGLFDKSEAETFAEIAKLAGVPNEAILIETQ 93
Query: 154 SLDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
S ++ +N +F+ ++ K + +++ILV + +R+ F+
Sbjct: 94 SSNSGENVRFTEQLLIEKGVNCESLILVQKPFMERRAIATFEKQ 137
>gi|153835682|ref|ZP_01988349.1| conserved hypothetical protein [Vibrio harveyi HY01]
gi|148867687|gb|EDL66959.1| conserved hypothetical protein [Vibrio harveyi HY01]
Length = 212
Score = 69.5 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 45/104 (43%), Gaps = 6/104 (5%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKLETQ 153
+ I+ SGG+ + +E+ + +GV + I +ETQ
Sbjct: 34 LRVAEYAAKLYHQKLAPLIVFSGGEGRFTDGLFEKSEAETFAEIAKLAGVPNEAILIETQ 93
Query: 154 SLDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
S ++ +N +F+ ++ K + +++ILV + +R+ F+
Sbjct: 94 SSNSGENVRFTEQLLIEKGVNCESLILVQKPFMERRAIATFEKQ 137
>gi|229523789|ref|ZP_04413194.1| hypothetical protein VCA_001366 [Vibrio cholerae bv. albensis
VL426]
gi|229337370|gb|EEO02387.1| hypothetical protein VCA_001366 [Vibrio cholerae bv. albensis
VL426]
Length = 215
Score = 69.5 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 28/161 (17%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L + ++ + L Q ++I++LG+ +
Sbjct: 1 MSKRLYQQIETLWDYLQLHQQPDV-ADLILVLGSNDVRVAE-----------------HA 42
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLD 156
+LY + ++ SGG + +E+ + ++GV I LETQS +
Sbjct: 43 AKLYHQ----GLAPYVLFSGGFGRFTQGVFNHSEAETFAAIAKDAGVPEHAILLETQSTN 98
Query: 157 TFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ +N FS ++ + K I+LV Y +R+ F
Sbjct: 99 SGENLHFSHQLLVQQARPAKRILLVQKPYMERRAYATFMQQ 139
>gi|153800981|ref|ZP_01955567.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|124123451|gb|EAY42194.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 214
Score = 69.5 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 28/161 (17%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L + ++ + L Q ++I++LG+ +
Sbjct: 1 MSKRLYQQIETLWDYLQLHQQPDV-ADLILVLGSNDVRVAE-----------------HA 42
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLD 156
+LY + ++ SGG + +E+ + ++GV I LETQS +
Sbjct: 43 AKLYHQ----GLAPYVLFSGGFGRFTQGVFNHSEAETFAAIAKDAGVPEHAILLETQSTN 98
Query: 157 TFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ +N FS ++ + K I+LV Y +R+ F
Sbjct: 99 SGENLHFSHQLLVQQARPAKRILLVQKPYMERRAYATFMQQ 139
>gi|297579279|ref|ZP_06941207.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297536873|gb|EFH75706.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 215
Score = 69.5 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 28/161 (17%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L + ++ + L Q ++I++LG+ +
Sbjct: 1 MSKRLYQQIETLWDYLQLHQQPDV-ADLILVLGSNDVRVAE-----------------HA 42
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLD 156
+LY + ++ SGG + +E+ + ++GV I LETQS +
Sbjct: 43 AKLYHQ----GLAPYVLFSGGFGRFTQGVFNHSEAETFAAIAKDAGVPEHAILLETQSTN 98
Query: 157 TFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ +N FS ++ + K I+LV Y +R+ F
Sbjct: 99 SGENLHFSHQLLVQQARPAKRILLVQKPYMERRAYATFMQQ 139
>gi|327458054|gb|EGF04709.1| hypothetical protein HMPREF9586_00155 [Propionibacterium acnes
HL083PA2]
Length = 208
Score = 69.5 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 62/181 (34%), Gaps = 22/181 (12%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ +C + +G + L SY + + IVL G ++P+
Sbjct: 1 MVVSACIAAFVALLGPWALAGAL------SYGKVHDVADTEPRDVAIVL---GAQVLPS- 50
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
PS R+ LY+S K +I+ GD ++ E V L+ G
Sbjct: 51 ----GTPSAYLRGRLDVAADLYRSGK-----AKVILVSGDHRETHYNEPKVMKTYLVSKG 101
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V I + LDT+ + + I+V+ YH R+ + G++
Sbjct: 102 VPAARIVEDVAGLDTYDTCVRARRI---FGVDRAIMVTQDYHEIRTVATCRMTGLDAVGV 158
Query: 203 C 203
Sbjct: 159 P 159
>gi|48477095|ref|YP_022801.1| hypothetical protein PTO0023 [Picrophilus torridus DSM 9790]
gi|48429743|gb|AAT42608.1| conserved hypothetical protein [Picrophilus torridus DSM 9790]
Length = 168
Score = 69.5 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 17/145 (11%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+I+++LG + R L K + I SGG
Sbjct: 2 DILIVLGCRLDKNCH--------GDEITERAKRGAMLLKEHPEAVA----IASGGITNIK 49
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYH 184
+E+ + + +++ DI LE +S T NA + ++K + I +V+S YH
Sbjct: 50 CRSEASFIADV-INHSIDK-DIILEERSTSTIGNAFSTGILLKEYKIDVSRIYIVTSCYH 107
Query: 185 LKRSQLYFQH-FGINTKASCSDYLN 208
+KR+ + F F + C DY
Sbjct: 108 VKRALMIFSKFFNVEILTECIDYKR 132
>gi|313813753|gb|EFS51467.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
Length = 208
Score = 69.5 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 63/181 (34%), Gaps = 22/181 (12%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ +C + +G ++ L SY + + IVL G ++P+
Sbjct: 1 MVVSTCIAAFVALLGPWVLAGAL------SYGKVHDVADTEPRDVAIVL---GAQVLPS- 50
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
PS R+ LY+S K +I+ GD ++ E V L+ G
Sbjct: 51 ----GTPSAYLRGRLDVAADLYRSGK-----AKVILVSGDHRETHYNEPKVMKTYLVSKG 101
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V I + LDT+ + + I+V+ YH R+ + G++
Sbjct: 102 VPAARIVEDVAGLDTYDTCVRARRI---FGVDRAIMVTQDYHEIRTVATCRMTGLDAVGV 158
Query: 203 C 203
Sbjct: 159 P 159
>gi|149920330|ref|ZP_01908800.1| hypothetical protein PPSIR1_08516 [Plesiocystis pacifica SIR-1]
gi|149818772|gb|EDM78214.1| hypothetical protein PPSIR1_08516 [Plesiocystis pacifica SIR-1]
Length = 221
Score = 69.5 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 25/171 (14%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+L G + P+ +E R+ + LY+S + +I+SG +
Sbjct: 48 VVLVLGARVHGDRPSNMLE------DRLAAALELYESGRAQ----KLILSG-AHHRDDYD 96
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E V L + GV DD+ L+ L T + + + + + +VS +HL R+
Sbjct: 97 EVTVMRRWLEDRGVPPDDLYLDHAGLRTLDSMVRAREV---FGVERLAVVSQDFHLPRAV 153
Query: 190 LYFQHFGINTKA--SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ G++T A + + Y A A +E++ A+
Sbjct: 154 YLGEQVGMDTIAVVAPAGYRYAEK---------VHRYNAAREHLARTRAWL 195
>gi|153825445|ref|ZP_01978112.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149740857|gb|EDM54942.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
Length = 215
Score = 69.5 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 28/161 (17%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L + ++ + L Q ++I++LG+ +
Sbjct: 1 MSKRLYQQIETLWDYLQLHQQPDV-ADLILVLGSNDVRVAE-----------------HA 42
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLD 156
+LY + ++ SGG + +E+ + ++GV I LETQS +
Sbjct: 43 AKLYHQ----GLAPDVLFSGGFGRFTQGVFNYSEAETFAAIAKDAGVPEHAILLETQSTN 98
Query: 157 TFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ +N FS ++ + K I+LV Y +R+ F
Sbjct: 99 SGENLHFSHQLLVQQARPAKRILLVQKPYMERRAYATFMQQ 139
>gi|17547179|ref|NP_520581.1| transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17429481|emb|CAD16167.1| putative transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 185
Score = 69.5 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 64/178 (35%), Gaps = 31/178 (17%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++IV+LG +S R+ LY + + + +SG
Sbjct: 37 PGRADVIVVLGG-----------------ESGQRVIGAAELYHA----GVAPRVFVSG-- 73
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILVSS 181
+ ++ +L +GV + I E +S T +NA+ + + ++ +LV+S
Sbjct: 74 -----EGDCLLIVRRLEMAGVPAERIGHECESGSTMENARMTRRTLAGQPPVRSAVLVTS 128
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YH R+ F+ + + + + S Y + L EYI R
Sbjct: 129 WYHTGRALHVFRR--VWPEVAWGARGVFPGDTLAKSFPIYESGSILAEYIKRAWYAVR 184
>gi|302534287|ref|ZP_07286629.1| integral membrane protein [Streptomyces sp. C]
gi|302443182|gb|EFL14998.1| integral membrane protein [Streptomyces sp. C]
Length = 257
Score = 69.5 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 50/142 (35%), Gaps = 16/142 (11%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
D + V+ G G P + R+ + LY++ K +++ GD
Sbjct: 82 PDAGVAVVFGAGLWKGRPTPYL--------AYRLDAAVELYRAGKV-----KVVLVTGDN 128
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ E L G+ D I + DT+ + + + +L+S +
Sbjct: 129 SRTEYDEPGAMRAYLRGHGIPDDRIVSDYAGFDTWDSCVRVREI---FGVRRAVLISQHF 185
Query: 184 HLKRSQLYFQHFGINTKASCSD 205
H+ R+ Q G+++ D
Sbjct: 186 HIHRAVALCQAAGVDSYGVGVD 207
>gi|90420238|ref|ZP_01228146.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335572|gb|EAS49322.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 244
Score = 69.5 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/227 (17%), Positives = 85/227 (37%), Gaps = 40/227 (17%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +R++ + + + G + ++ + L P + IV+L G
Sbjct: 33 RGVRRLCLAAVLVGVLLG---GYLAGGFVRFAEEVSL--LAKPAPIGAADGIVVLTGG-- 85
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN-- 135
RI + + L K + ++ISG +P + + +
Sbjct: 86 ----------------ALRIDQAIDLLKEGRGR----RLLISGVNPGTSAATLARMTDTD 125
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L V+ L+ +L+T NA+ + + + +++ILV+S YH+ RS F
Sbjct: 126 RDLFACCVD-----LDYAALNTVGNAEIARNWAREQGFRDLILVTSDYHMPRSLREFDRI 180
Query: 196 G--INTKASCSDYLNAYYS-IIPLSANFYLTELALKEYIGILIAYYR 239
G + + + + ++P +A + L EY ++ A R
Sbjct: 181 GELRSVTPYAVRRDDLWSAELMPNTAGLR---VLLTEYAKLIAARVR 224
>gi|229824827|ref|ZP_04450896.1| hypothetical protein GCWU000182_00176 [Abiotrophia defectiva ATCC
49176]
gi|229790830|gb|EEP26944.1| hypothetical protein GCWU000182_00176 [Abiotrophia defectiva ATCC
49176]
Length = 211
Score = 69.5 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 81/190 (42%), Gaps = 15/190 (7%)
Query: 42 PTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
IL+++ R + +D +II + G+ ++ A + ++ + M
Sbjct: 6 SNILMRNNIDDITRYIFIEDEPQDSDIIFIPGSSNWVLAET-AASLYKEGKANKIMPSGM 64
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
YK + + ++ + + E+ ++ L+++GVE DI +E ++ +T++NA
Sbjct: 65 YFYKIGRFLNER----VTDERYKGNFRTEAEFLSSVLVKNGVENKDILIEEKATNTYENA 120
Query: 162 QFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPLS 217
FS ++K K I+ A+H +R+ + + H + +D +
Sbjct: 121 IFSRDLLKENNLTVKKAIICPQAFHARRAFMTYSHLFPDVEFYVVPTDTQGI------TA 174
Query: 218 ANFYLTELAL 227
++Y TE +
Sbjct: 175 DSWYKTERGI 184
>gi|291451163|ref|ZP_06590553.1| integral membrane protein [Streptomyces albus J1074]
gi|291354112|gb|EFE81014.1| integral membrane protein [Streptomyces albus J1074]
Length = 228
Score = 69.5 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 16/136 (11%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+ G G EPS R+ LY++ + +++ GD +
Sbjct: 60 VVFGAGL--------WGEEPSPYLARRLDAAAELYEAGRTE-----VVLVTGDNSREEYD 106
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E L+ GV I + DT+ + + + +L+S +H+ R+
Sbjct: 107 EPEAMRRYLVARGVPDHRIVSDYAGFDTWDSCVRARKI---FGVDKAVLISQGFHIHRAV 163
Query: 190 LYFQHFGINTKASCSD 205
+ G+ D
Sbjct: 164 TLCRSAGLQAYGIGVD 179
>gi|326779511|ref|ZP_08238776.1| protein of unknown function DUF218 [Streptomyces cf. griseus
XylebKG-1]
gi|326659844|gb|EGE44690.1| protein of unknown function DUF218 [Streptomyces cf. griseus
XylebKG-1]
Length = 286
Score = 69.5 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 49/157 (31%), Gaps = 16/157 (10%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+ G G P + R+ LY++ K +++ GD +
Sbjct: 117 VVFGAGLWKGRPTPYL--------AHRLDAAAELYRTGKV-----KVVLVTGDNSRVEYD 163
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E L GV + I + D++ + + + +LVS +H+ R+
Sbjct: 164 EPDAMRTYLTGRGVPDERIVSDYAGFDSWDSCVRAKKI---FGVDRAVLVSQGFHIHRAV 220
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
+ GI+ D + + A
Sbjct: 221 TLCRSAGIDAYGVGVDEPRDATWYYGGARELAASGKA 257
>gi|289425979|ref|ZP_06427726.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|289428008|ref|ZP_06429712.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|295131649|ref|YP_003582312.1| hypothetical protein HMPREF0675_5190 [Propionibacterium acnes
SK137]
gi|289153522|gb|EFD02236.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|289158891|gb|EFD07091.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|291377167|gb|ADE01022.1| conserved hypothetical protein [Propionibacterium acnes SK137]
gi|313763777|gb|EFS35141.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
gi|313771794|gb|EFS37760.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
gi|313793673|gb|EFS41704.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
gi|313802985|gb|EFS44193.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
gi|313808396|gb|EFS46863.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
gi|313810616|gb|EFS48330.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
gi|313816904|gb|EFS54618.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
gi|313818182|gb|EFS55896.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
gi|313821040|gb|EFS58754.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
gi|313824082|gb|EFS61796.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
gi|313827172|gb|EFS64886.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
gi|313829705|gb|EFS67419.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
gi|313831658|gb|EFS69372.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
gi|313834812|gb|EFS72526.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
gi|313839386|gb|EFS77100.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
gi|314916668|gb|EFS80499.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
gi|314918874|gb|EFS82705.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
gi|314920885|gb|EFS84716.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
gi|314927065|gb|EFS90896.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
gi|314932327|gb|EFS96158.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
gi|314956603|gb|EFT00855.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
gi|314959483|gb|EFT03585.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
gi|314961887|gb|EFT05988.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
gi|314964678|gb|EFT08778.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
gi|314968916|gb|EFT13014.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
gi|314975008|gb|EFT19103.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
gi|314977895|gb|EFT21989.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
gi|314979615|gb|EFT23709.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
gi|314984697|gb|EFT28789.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
gi|314988351|gb|EFT32442.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
gi|314990247|gb|EFT34338.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
gi|315079332|gb|EFT51333.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
gi|315082373|gb|EFT54349.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
gi|315083835|gb|EFT55811.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
gi|315087295|gb|EFT59271.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
gi|315089713|gb|EFT61689.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
gi|315095586|gb|EFT67562.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
gi|315100252|gb|EFT72228.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
gi|315102576|gb|EFT74552.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
gi|315109664|gb|EFT81640.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
gi|327326624|gb|EGE68412.1| putative integral membrane protein [Propionibacterium acnes
HL096PA3]
gi|327332888|gb|EGE74620.1| putative integral membrane protein [Propionibacterium acnes
HL096PA2]
gi|327335292|gb|EGE77002.1| putative integral membrane protein [Propionibacterium acnes
HL097PA1]
gi|327447716|gb|EGE94370.1| hypothetical protein HMPREF9571_00999 [Propionibacterium acnes
HL043PA2]
gi|327448591|gb|EGE95245.1| hypothetical protein HMPREF9570_00149 [Propionibacterium acnes
HL043PA1]
gi|327449557|gb|EGE96211.1| hypothetical protein HMPREF9568_00216 [Propionibacterium acnes
HL013PA2]
gi|327455902|gb|EGF02557.1| hypothetical protein HMPREF9581_00176 [Propionibacterium acnes
HL087PA3]
gi|327456005|gb|EGF02660.1| hypothetical protein HMPREF9584_00892 [Propionibacterium acnes
HL092PA1]
gi|328757215|gb|EGF70831.1| hypothetical protein HMPREF9579_00146 [Propionibacterium acnes
HL087PA1]
gi|328757406|gb|EGF71022.1| hypothetical protein HMPREF9563_00955 [Propionibacterium acnes
HL020PA1]
gi|328757598|gb|EGF71214.1| hypothetical protein HMPREF9588_01226 [Propionibacterium acnes
HL025PA2]
gi|328762014|gb|EGF75520.1| putative integral membrane protein [Propionibacterium acnes
HL099PA1]
Length = 208
Score = 69.5 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 62/181 (34%), Gaps = 22/181 (12%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ +C + +G + L SY + + IVL G ++P+
Sbjct: 1 MVVSTCIAAFVALLGPWALAGAL------SYGKVHDVADTEPRDVAIVL---GAQVLPS- 50
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
PS R+ LY+S K +I+ GD ++ E V L+ G
Sbjct: 51 ----GTPSAYLRGRLDVAADLYRSGK-----AKVILVSGDHRETHYNEPKVMKTYLVSKG 101
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V I + LDT+ + + I+V+ YH R+ + G++
Sbjct: 102 VPAARIVEDVAGLDTYDTCVRARRI---FGVDRAIMVTQDYHEIRTVATCRMTGLDAVGV 158
Query: 203 C 203
Sbjct: 159 P 159
>gi|254506207|ref|ZP_05118351.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
gi|219551025|gb|EED28006.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
Length = 198
Score = 69.1 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 11/107 (10%)
Query: 96 RIFE-TMRLYKSCKQHSMHCTIIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKL 150
R+ E LY T+I SGG + +E+ + + + GV + I +
Sbjct: 22 RVAEYAATLYLEGWAK----TLIFSGGVGRLTDGVFDKSEAETFADIAKDMGVPSNAIIV 77
Query: 151 ETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHF 195
E ++ +T +N +++S++ + + ILV Y +R+ F
Sbjct: 78 ENKATNTGENVLYTASLLNQLGHRFSSFILVQKPYMERRTYATFIKQ 124
>gi|90414034|ref|ZP_01222018.1| hypothetical protein P3TCK_06857 [Photobacterium profundum 3TCK]
gi|90324956|gb|EAS41477.1| hypothetical protein P3TCK_06857 [Photobacterium profundum 3TCK]
Length = 217
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 96 RIFE-TMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKL 150
R+ E +LY + I+ SGG+ + G +E+ + + + GV + I +
Sbjct: 37 RVAEHAAKLYLA----GYAPYIVFSGGEGELTKGLFGCSEAEYFAHIAADMGVPLEKILI 92
Query: 151 ETQSLDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRS 188
E QS +T +N QF+ ++ K++ +ILV + +R+
Sbjct: 93 EPQSTNTGENVQFTRELLESKDLTPNKMILVQKPFMERRT 132
>gi|297199506|ref|ZP_06916903.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
gi|197712947|gb|EDY56981.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
Length = 228
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 16/144 (11%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ V+ G G EPS R+ +LY+ + ++++G D
Sbjct: 54 PRTEVAVVFGAGLWD--------GEPSPYLAHRLDAAAKLYRENRIE----VVLVTG-DN 100
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ E L GV I + DT+ + + + +L+S +
Sbjct: 101 SREDYDEPDAMRAYLTRHGVPDTRIVSDYAGFDTWDSCVRARKI---FGVHQAVLISQGF 157
Query: 184 HLKRSQLYFQHFGINTKASCSDYL 207
H++R+ Q G+ + D
Sbjct: 158 HIRRAVALCQAAGVTSYGIGVDAR 181
>gi|256005338|ref|ZP_05430303.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|281417642|ref|ZP_06248662.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
gi|255990657|gb|EEU00774.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
2360]
gi|281409044|gb|EFB39302.1| protein of unknown function DUF218 [Clostridium thermocellum JW20]
gi|316940321|gb|ADU74355.1| protein of unknown function DUF218 [Clostridium thermocellum DSM
1313]
Length = 215
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 27/135 (20%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG+ T + ++ I+ SGG +
Sbjct: 24 DCIVVLGSHDTRVA-----------------KRGAEIF----LEGFAPLIVFSGGYGKLT 62
Query: 127 G----LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILVS 180
E+ + ++ GV I +E +S +T +N F +I K ++ + II V+
Sbjct: 63 KHIWNTTEAEKFARIAMDMGVPETSILIEDKSSNTGENILFVKDLINNKKIKVQKIIAVN 122
Query: 181 SAYHLKRSQLYFQHF 195
Y +R+ F+
Sbjct: 123 KPYMERRTYAAFKKL 137
>gi|205359861|ref|ZP_02832915.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205342506|gb|EDZ29270.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
Length = 178
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 57/159 (35%), Gaps = 24/159 (15%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + I +I ++ FI I + + ++ G
Sbjct: 44 FMKYRYIIRIAAGIILIMATVFIHNAIA------------IYQFSQQNQTRVADCAIVAG 91
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + PS +R+ + LY+ + ++++GG ++++ +
Sbjct: 92 AGVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAGATVSDAAI 139
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+LE G+ I +E +S T +N +++ +++
Sbjct: 140 ARQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQH 178
>gi|260768192|ref|ZP_05877126.1| hypothetical protein VFA_001241 [Vibrio furnissii CIP 102972]
gi|260616222|gb|EEX41407.1| hypothetical protein VFA_001241 [Vibrio furnissii CIP 102972]
gi|315179893|gb|ADT86807.1| conserved hypothetical protein [Vibrio furnissii NCTC 11218]
Length = 212
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHG----LAESIVYNNKLLESGVERDDIKLETQ 153
+ + + I+ SGG + +E++ + + GV D + LE +
Sbjct: 38 TRVAEIAAAAYHKGLAPLIVFSGGHGRFTDGIFKHSEAVTFAQVAKDCGVPSDALLLEPR 97
Query: 154 SLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHF 195
S ++ +N +F+ +++ + IILV Y +R+ F
Sbjct: 98 STNSGENVRFTHELLQKKGIHPRKIILVQKPYMERRAYATFMKQ 141
>gi|182438855|ref|YP_001826574.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178467371|dbj|BAG21891.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 286
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 49/157 (31%), Gaps = 16/157 (10%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+ G G P + R+ LY++ K +++ GD +
Sbjct: 117 VVFGAGLWKGRPTPYL--------AHRLDAAAELYRTGKV-----KVVLVTGDNSRVEYD 163
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E L GV + I + D++ + + + +LVS +H+ R+
Sbjct: 164 EPDAMRTYLTGRGVPDERIVSDYAGFDSWDSCVRAKKI---FGVDRAVLVSQGFHIHRAV 220
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
+ GI+ D + + A
Sbjct: 221 TLCRSAGIDAYGVGVDEPRDATWYYGGARELAASGKA 257
>gi|271967291|ref|YP_003341487.1| hypothetical protein Sros_6010 [Streptosporangium roseum DSM 43021]
gi|270510466|gb|ACZ88744.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
Length = 226
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 67/197 (34%), Gaps = 21/197 (10%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWK-----KDGNIIVLLGNGTTIIPTIPAIRIE 88
+ + + L S R + + ++LG A
Sbjct: 16 VLLSVLAVAPLTWAWLTSSGHRAVADSAPGWMSGVPGAPVALVLGA--------AAWGTT 67
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS R+ + LY++ K + I++SG D + G E V + LL V +
Sbjct: 68 PSPMLARRLDISAELYRAGKVKA----ILLSG-DNSRAGYDEPTVMRDYLLARRVPAGAL 122
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
L+ DT+ + + + + +V+ +HL R+ + G+ T D
Sbjct: 123 VLDYAGFDTWDSCVRARDV---FGATRLTVVTQVFHLPRAVALCRAAGLETFGVGDDSAR 179
Query: 209 AYYSIIPLSANFYLTEL 225
+ S +A +L
Sbjct: 180 RWVSTYSYAAREFLASA 196
>gi|318060469|ref|ZP_07979192.1| integral membrane protein [Streptomyces sp. SA3_actG]
Length = 262
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 66/172 (38%), Gaps = 21/172 (12%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI-----IVLLGNGTTIIPTIPAIRIEPSFQ 92
W ++ +L L ++ R + + ++ V+ G G +PS
Sbjct: 35 WAVVGLCVLALLPSAWIRVASDGGVRAEADVGRAPVAVVFGAGLWD--------GKPSPY 86
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
R+ RLY + + + ++++G D + E + L +GV R + +
Sbjct: 87 LAHRLDAAARLYAAGRVTA----VLVTG-DNSRTSYDEPTAMRDYLARAGVPRRQVVRDY 141
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
DT+ + + + +LVS +H++R+ + GI+ + +
Sbjct: 142 AGFDTWDSCVRAHRV---FGVDRAVLVSQGFHIRRAVALCRAAGIDAQGVAA 190
>gi|125973442|ref|YP_001037352.1| hypothetical protein Cthe_0925 [Clostridium thermocellum ATCC
27405]
gi|125713667|gb|ABN52159.1| protein of unknown function DUF218 [Clostridium thermocellum ATCC
27405]
Length = 215
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 27/135 (20%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG+ T + ++ I+ SGG +
Sbjct: 24 DCIVVLGSHDTRVA-----------------KRGAEIF----LEGFAPLIVFSGGYGKLT 62
Query: 127 G----LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILVS 180
E+ + ++ GV I +E +S +T +N F +I K ++ + II V+
Sbjct: 63 KHIWNTTEAEKFARIAMDMGVPETSILIEDKSSNTGENILFVKDLINNKKIKVQKIIAVN 122
Query: 181 SAYHLKRSQLYFQHF 195
Y +R+ F+
Sbjct: 123 KTYMERRTYAAFKKL 137
>gi|323139875|ref|ZP_08074903.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
gi|322394871|gb|EFX97444.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
Length = 199
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 8/119 (6%)
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P + + S S I + LY I+++G P E VY + L
Sbjct: 32 PENVDVALVLGSPSISNILPAVSLYMQGMTR----RIVVTGHGPADGSEPEWRVYRDYAL 87
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG----KNIILVSSAYHLKRSQLYFQH 194
+GV I +E + +T +N FS +I + G ++ + S H +R+ + +
Sbjct: 88 SAGVPEAAILVEPHARNTLENFVFSDRLIADEIGWSNIGSMAICSKPLHARRAYMTARR 146
>gi|296533571|ref|ZP_06896140.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296266108|gb|EFH12164.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 165
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 12/130 (9%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I++ G PS R+ + ++ +GG + HG
Sbjct: 6 AIIIFGAAVRADGG-------PSLTLRRRVMAAAAFGATLSPPPLYVP---TGGQGR-HG 54
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ V L + GV DI+ E DT +A+ ++++++ G + SS YHL R
Sbjct: 55 PPEAEVMARLLQDLGVPAGDIRQERSGTDTLSSARACAALLRDHAG-PVHAASSGYHLPR 113
Query: 188 SQLYFQHFGI 197
+ + G+
Sbjct: 114 CVMLLRLHGL 123
>gi|167626292|ref|YP_001676792.1| hypothetical protein Fphi_0071 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167596293|gb|ABZ86291.1| hypothetical protein Fphi_0071 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 377
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 14/133 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+IV+LG+ ++ R+++ + Y TII+SGG G
Sbjct: 207 VIVILGSPLNSNASMNEY-------LIKRLYKGLEAY----FRFPEATIIVSGGRVTA-G 254
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IILVSSAYHL 185
ES L+ S V I LE QS + + IKNM K IILV+S +
Sbjct: 255 KTESYQMRQWLVNSSVPLKKIILEDQSFNMVWQGVNTFMTIKNMNPKPTDIILVTSTADI 314
Query: 186 KRSQLYFQHFGIN 198
+R+ F+ +
Sbjct: 315 RRANAIFKQEAFD 327
>gi|325068099|ref|ZP_08126772.1| hypothetical protein AoriK_09771 [Actinomyces oris K20]
Length = 219
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 15/140 (10%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ ++LG +PS R+ LY S + + +++SG D
Sbjct: 39 ARAPVAIVLGAAVHAD-------GQPSPWLAHRLDAAAELYTSGRVEA----VLVSG-DN 86
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
++ G E V + LL G+ I L+ DT+ + + + +LV+ +
Sbjct: 87 RRAGYDEPTVMRSYLLSRGIPEQAIALDYAGFDTYDTCVRARRI---FGIERALLVTQDF 143
Query: 184 HLKRSQLYFQHFGINTKASC 203
H R+ + G++
Sbjct: 144 HEPRAVAICRSVGLDVDGVG 163
>gi|302560203|ref|ZP_07312545.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
gi|302477821|gb|EFL40914.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
Length = 221
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 12/127 (9%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAE 130
G + P ++ I T LY M I+ +G + E
Sbjct: 20 GHELRPC--SVAIGLGSHDLGVADTTADLYH----RGMTPLIVFTGATSRTTRDRMPRGE 73
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRS 188
+ Y + +E GV D I +E ++ +T +N +FS +++++ +++LVS Y +R+
Sbjct: 74 AEHYRERAMELGVPADAILVEPRARNTGENIRFSRALLEDYGAVVSSVLLVSKPYEERRA 133
Query: 189 QLYFQHF 195
+
Sbjct: 134 YATARKL 140
>gi|153008321|ref|YP_001369536.1| hypothetical protein Oant_0986 [Ochrobactrum anthropi ATCC 49188]
gi|151560209|gb|ABS13707.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 302
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 74/205 (36%), Gaps = 43/205 (20%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
++++ ++ Q + + F+ L F+ +G T + P
Sbjct: 85 NFLWSVMMRMFRRLQPVSIVLFVILLAFLVGFVAFGEKVTSM------------QPPAID 132
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ + I++L G SRI + L K + ++ISG P
Sbjct: 133 EPADAIIVLTGG------------------QSRIQAAVDLLKDKRGK----RLLISGVHP 170
Query: 124 QKH--GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ L + + L + V+ D +L+T NA S I+ + +ILV++
Sbjct: 171 ATNEKALQRATHADQSLFDCCVDLDR-----SALNTIGNATESERWIRTNNYRRVILVTN 225
Query: 182 AYHLKRS--QLYFQHFGINTKASCS 204
YH+ RS ++ ++ +
Sbjct: 226 NYHIPRSTLEMSYRMKDVEFIPYPV 250
>gi|241668732|ref|ZP_04756310.1| hypothetical protein FphipA2_08190 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 352
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 14/133 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+IV+LG+ ++ R+++ + Y TII+SGG G
Sbjct: 182 VIVILGSPLNSNASMNEY-------LIKRLYKGLEAY----FRFPEATIIVSGGRVTA-G 229
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IILVSSAYHL 185
ES L+ S V I LE QS + + IKNM K IILV+S +
Sbjct: 230 KTESYQMRQWLVNSSVPLKKIILEDQSFNMVWQGVNTFMTIKNMNPKPTDIILVTSTADI 289
Query: 186 KRSQLYFQHFGIN 198
+R+ F+ +
Sbjct: 290 RRANAIFKQEAFD 302
>gi|311279538|ref|YP_003941769.1| hypothetical protein Entcl_2232 [Enterobacter cloacae SCF1]
gi|308748733|gb|ADO48485.1| protein of unknown function DUF218 [Enterobacter cloacae SCF1]
Length = 262
Score = 69.1 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 66/201 (32%), Gaps = 47/201 (23%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
++ Q SPQ D + +VL GN + P+ + R+ RL
Sbjct: 19 EWLAQNDFTSPQQDVDADCVVLAGN-----------AVIPTIDAACRLSAANRL------ 61
Query: 110 HSMHCTIIISGGDP-------------------QKHGLAESIVYNNKL-LESGVERDDIK 149
++ISGG Q G AE+ + + + R+ I
Sbjct: 62 ------LLISGGIGHSTPFLYAAVARHPRYNVLQTAGRAEADILADIAHRFWNIPRERIL 115
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQH--FGINTKASCSD 205
+E +S + +NA+F+ M+ + I+V +R+ F G +
Sbjct: 116 VEDKSTNCGENARFTRDMLTSQGITVGRGIVVQDPTMQRRTMATFARVWEGADNAPRWVS 175
Query: 206 YLNAYYSIIPLSANFYLTELA 226
Y + + T A
Sbjct: 176 YPGYLPVLRNGADGLAFTHAA 196
>gi|163790688|ref|ZP_02185115.1| hypothetical protein CAT7_00865 [Carnobacterium sp. AT7]
gi|159873989|gb|EDP68066.1| hypothetical protein CAT7_00865 [Carnobacterium sp. AT7]
Length = 196
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P + I P Q Y R + L S II+S + ++ V
Sbjct: 38 PVQSDVIIVPEGQEYVRAYRAAELLHEGFSTSGQ--IIVS-------PIDKATVQG--YK 86
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
E V ++ I ET++ T++NA + M++ + I+VSS YH++R++L ++
Sbjct: 87 EFWVSQEQIIPETKATSTYENAVITLRMMEEHGFDSAIIVSSDYHMRRTKLIYER 141
>gi|153810184|ref|ZP_01962852.1| hypothetical protein RUMOBE_00565 [Ruminococcus obeum ATCC 29174]
gi|149833363|gb|EDM88444.1| hypothetical protein RUMOBE_00565 [Ruminococcus obeum ATCC 29174]
Length = 194
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 65/177 (36%), Gaps = 21/177 (11%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ +II + GNG + + A ++ + + + +++G
Sbjct: 19 PEKADIIFVPGNGYSQMAER-AAQLYAKKYALFVLPSG-----KYSISTGRFGGVLTGQK 72
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILV 179
E + L+++GV D + E Q+ T++NA+FS + + I+
Sbjct: 73 RYSGEYQTEWEFLKDVLMKNGVPADAVLKEDQATFTWENAKFSRKVTDQAGINIRKAIIC 132
Query: 180 SSAYHLKRSQLYFQHF----GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
YH +R+ +Y+Q C D + N+ +E +KE +
Sbjct: 133 CKNYHARRALMYYQRAYPDTEFRVCPCCVDGITR--------DNWTESERGIKEVLA 181
>gi|259506560|ref|ZP_05749462.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165980|gb|EEW50534.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 148
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 62/160 (38%), Gaps = 23/160 (14%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
I++LG+ + + SR+ L + S +++SG
Sbjct: 4 ILVLGS--------RVVNGHVNALLASRLDRAAELAGA----SGAVAVVVSG-------R 44
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ + L + GV + I E + T +N + + +++ + + +V+S +H R+
Sbjct: 45 GEAAAMADYLRDLGV--ETIIEEPHATSTNENLENAHALLPDT--RRWTVVTSDFHAWRT 100
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
L+ H GI + + + + L L AL+
Sbjct: 101 YLWAWHLGIPITVVTAPTPLSVRTQMFLRECLALPHSALR 140
>gi|311900820|dbj|BAJ33228.1| hypothetical protein KSE_74730 [Kitasatospora setae KM-6054]
Length = 230
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 17/162 (10%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+V+LG P R R+ +R + +I+SGG P H
Sbjct: 68 TAVVVLGYRNPGATANPVNRW--------RVRAGIRSVPADGAPGT--RLILSGG-PTGH 116
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
G E+ + + + LE +S +T++N ++++ I LVS H
Sbjct: 117 GTTEARLMADYATSVLGFDGAVLLEERSTNTWENITHVIPLLEDA--DRIKLVSQPAHAL 174
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
+++ Y + + + L P LAL
Sbjct: 175 KARAYLRRQ----RPDLARRLVRADDYRPGEWTLVKPLLALH 212
>gi|315647696|ref|ZP_07900797.1| hypothetical protein PVOR_20324 [Paenibacillus vortex V453]
gi|315276342|gb|EFU39685.1| hypothetical protein PVOR_20324 [Paenibacillus vortex V453]
Length = 202
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 26/135 (19%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+II + G ++ R+++ + LY + I+ +GGD
Sbjct: 34 ADIIFVFGG-----------------KNLDRVWKAVELYNDGRAPY----ILFAGGDRFG 72
Query: 126 H-GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN----MQGKNIILVS 180
E+ + ++ ++ GV + I +ET S T +N S ++ Q + ++ VS
Sbjct: 73 EWDQPEATMMRDEAVKMGVPPESIFIETMSNHTKENVIASLIVLDRALGLQQIQRLLFVS 132
Query: 181 SAYHLKRSQLYFQHF 195
+ H++R QL + F
Sbjct: 133 APSHMRRCQLLLKTF 147
>gi|302519757|ref|ZP_07272099.1| integral membrane protein [Streptomyces sp. SPB78]
gi|302428652|gb|EFL00468.1| integral membrane protein [Streptomyces sp. SPB78]
Length = 254
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 66/172 (38%), Gaps = 21/172 (12%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNI-----IVLLGNGTTIIPTIPAIRIEPSFQ 92
W ++ +L L ++ R + + ++ V+ G G +PS
Sbjct: 27 WAVVGLCVLALLPSAWIRVASDGGVRAEADVGRAPVAVVFGAGLWD--------GKPSPY 78
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
R+ RLY + + + ++++G D + E + L +GV R + +
Sbjct: 79 LAHRLDAAARLYAAGRVTA----VLVTG-DNSRTSYDEPTAMRDYLARAGVPRRQVVRDY 133
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
DT+ + + + +LVS +H++R+ + GI+ + +
Sbjct: 134 AGFDTWDSCVRAHRV---FGVDRAVLVSQGFHIRRAVALCRAAGIDAQGVAA 182
>gi|254877263|ref|ZP_05249973.1| predicted protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254843284|gb|EET21698.1| predicted protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 377
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 14/133 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+IV+LG+ ++ R+++ + Y TII+SGG G
Sbjct: 207 VIVILGSPLNSNASMNEY-------LIKRLYKGLEAY----FRFPEATIIVSGGRVTA-G 254
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IILVSSAYHL 185
ES L+ S V I LE QS + + IKNM K IILV+S +
Sbjct: 255 KTESYQMRQWLVNSSVPLKKIILEDQSFNMVWQGVNTFMTIKNMNPKPTDIILVTSTADI 314
Query: 186 KRSQLYFQHFGIN 198
+R+ F+ +
Sbjct: 315 RRANAIFKQEAFD 327
>gi|310800627|gb|EFQ35520.1| DUF218 domain-containing protein [Glomerella graminicola M1.001]
Length = 218
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 116 IIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
+I SGG + E+ V+ + + GV D I +E +S +T +N +F+ +++K+
Sbjct: 57 LIYSGGVGKLTAGRFTKPEAEVFADIARQLGVPDDKIIVEPRSGNTGENVRFTHALLKHR 116
Query: 172 QG--KNIILVSSAYHLKRSQLYFQHF 195
K+ +LV Y +R+ F
Sbjct: 117 GLSMKSFVLVQKPYMERRTYATFLKQ 142
>gi|118591370|ref|ZP_01548768.1| hypothetical protein SIAM614_27023 [Stappia aggregata IAM 12614]
gi|118436042|gb|EAV42685.1| hypothetical protein SIAM614_27023 [Stappia aggregata IAM 12614]
Length = 241
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/223 (15%), Positives = 82/223 (36%), Gaps = 33/223 (14%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
++ F+ + + + G + F+ + + + IV+L G
Sbjct: 43 RKKRFGLRVLFVAVVTALLAGTAGQFAM----FAQKVANARVPATANADAIVVLTGGH-- 96
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN--N 136
+R+ E +RL + + + ++ISG P + V
Sbjct: 97 ----------------ARVNEAVRLLEEGRAN----RLLISGVHPGTTREQLAAVTASNM 136
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L + V+ D + +L+T NA +++ ++ ++++V+SAYHL R+++
Sbjct: 137 PLETNSVDLDRV-----ALNTAGNAVETANWVRKNGFSSLLVVTSAYHLPRAKVELAGAL 191
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + L ++EY+ ++A R
Sbjct: 192 PDVSLIAYPVFSKDLKLDHWYREPATMRLLMREYVKYILARLR 234
>gi|328470090|gb|EGF41001.1| hypothetical protein VP10329_04817 [Vibrio parahaemolyticus 10329]
Length = 280
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 24/136 (17%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
GN++++LG + + S + SR+ + + ++ GG Q
Sbjct: 4 GNVVIVLG--------KRLVNNQLSAEGISRVEALAAKIREMPMENTA--LVFCGGKTQG 53
Query: 126 HGLAESIVYNNKL------LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---- 175
++E+ L LE +SL+TF+N + ++ ++
Sbjct: 54 QSISEADAMYAYFQTLNTSLAKPFPTSQTLLENRSLNTFENMRNAAKVLCESGLFPLPSQ 113
Query: 176 ----IILVSSAYHLKR 187
+IL+S+AYHL+R
Sbjct: 114 AAVEVILLSNAYHLER 129
>gi|67924001|ref|ZP_00517453.1| Protein of unknown function DUF218 [Crocosphaera watsonii WH 8501]
gi|67854141|gb|EAM49448.1| Protein of unknown function DUF218 [Crocosphaera watsonii WH 8501]
Length = 237
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 63/197 (31%), Gaps = 40/197 (20%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
L + K F F+ L FI + +L++ L + I
Sbjct: 15 FDLTARLTKRKWKKRFKLLFLALIGFIFSSLAFNVLVR----------LPINTNHTVDGI 64
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG S R ++ ++ II+S G
Sbjct: 65 LVLGG------------------SIRREIYAAQIASDYQE----VPIIVSQGSKPP---- 98
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
D++ +E + TF N F +++ + + +++S HL R+Q
Sbjct: 99 ---CIKLIFQREQTPMDNVWVEQCAYSTFDNFFFCVPLLQKHRVHKVKVITSQSHLPRAQ 155
Query: 190 LYFQ-HFGINTKASCSD 205
L Q HFG A D
Sbjct: 156 LLAQIHFGAKGIAVEVD 172
>gi|262189669|ref|ZP_06048045.1| hypothetical protein VIH_000084 [Vibrio cholerae CT 5369-93]
gi|262034450|gb|EEY52814.1| hypothetical protein VIH_000084 [Vibrio cholerae CT 5369-93]
Length = 215
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 28/161 (17%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L + ++ + L Q ++I++LG+ +
Sbjct: 1 MSKRLYQQIETLWDYLQLHQQPDV-ADLILVLGSNDVRVAE-----------------HA 42
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLD 156
+LY + ++ SGG + +E+ + ++GV I LETQS +
Sbjct: 43 AKLYHQ----GLAPYVLFSGGFGRFTQGVFNHSEAETFAAIAKDAGVPEHAILLETQSTN 98
Query: 157 TFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ +N FS ++ + K I+LV Y +R+ F
Sbjct: 99 SGENLHFSHQLLVQQAWPAKRILLVQKPYMERRAYATFMQQ 139
>gi|291084551|ref|ZP_06538762.2| hypothetical protein Salmonellaentericaenterica_28467 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 165
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 57/159 (35%), Gaps = 24/159 (15%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + I +I ++ FI I + + ++ G
Sbjct: 31 FMKYRYILRIAAGIILIMAMVFIHNAIA------------IYQFSQQNQTRVADCAIVAG 78
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + PS +R+ + LY+ + ++++GG ++++ +
Sbjct: 79 AGVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAGATVSDAAI 126
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+LE G+ I +E +S T +N +++ +++
Sbjct: 127 ARQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQH 165
>gi|229515088|ref|ZP_04404548.1| hypothetical protein VCB_002743 [Vibrio cholerae TMA 21]
gi|229347793|gb|EEO12752.1| hypothetical protein VCB_002743 [Vibrio cholerae TMA 21]
Length = 214
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 28/161 (17%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L + ++ + L Q ++I++LG+ +
Sbjct: 1 MSKRLYQQIETLWDYLQLHQQPDV-ADLILVLGSNDLRVAE-----------------HA 42
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLD 156
+LY + ++ SGG + +E+ + ++GV I LETQS +
Sbjct: 43 AKLYHQ----GLAPYVLFSGGFGRFTQGVFNHSEAETFAAIAKDAGVPEHAILLETQSTN 98
Query: 157 TFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ +N FS ++ + K I+LV Y +R+ F
Sbjct: 99 SGENLHFSHQLLVQQARPAKRILLVQKPYMERRAYATFMQQ 139
>gi|318061872|ref|ZP_07980593.1| hypothetical protein SSA3_28290 [Streptomyces sp. SA3_actG]
gi|318078572|ref|ZP_07985904.1| hypothetical protein SSA3_18119 [Streptomyces sp. SA3_actF]
Length = 227
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQ 153
LY++ + T++ +GG+ E++ ++ L GV + LE +
Sbjct: 52 TYAADLYRA----GLFPTLVFTGGNSSDTLGAFPRGEAVHFHEHALALGVPAHAMLLEPR 107
Query: 154 SLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
+ +T QN F+ + + ++++LV+ Y +R+ F+ + C+ ++
Sbjct: 108 AANTGQNIAFARETLTDAGLRPRSVLLVTMPYMERRAFATFRKQWPEVEVVCASDPLSFD 167
Query: 212 SII 214
S +
Sbjct: 168 SYL 170
>gi|213964532|ref|ZP_03392732.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
gi|213952725|gb|EEB64107.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
Length = 281
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 70/194 (36%), Gaps = 36/194 (18%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + +V+LG PS R+ + +C + + II SG
Sbjct: 96 KPTVPPHTVVVLGCALKNN--------RPSALLARRLQRAVA---ACDERTE--RIICSG 142
Query: 121 GDPQ----KHGLAESIVYNNKLLESG---VERDDI--KLETQSLDTFQNAQFSSSMIKNM 171
G +E+ L + V+R DI E QS +T +N ++ +++
Sbjct: 143 GLGSEAVTDATCSEADAMVEWLEANAGDVVKRGDIELIPEDQSTNTSENIDYACELMRGT 202
Query: 172 QG---KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
G ++V+S +H R + G+ ++ + + Y L+
Sbjct: 203 DGALSAGTVVVTSDFHAPRVAKLVRERGLE----------SWCIVGAYTPLRYWATSLLR 252
Query: 229 EYIGILIAY-YRGN 241
E++ I + RGN
Sbjct: 253 EFLAQFILWAPRGN 266
>gi|147674691|ref|YP_001217246.1| hypothetical protein VC0395_A1302 [Vibrio cholerae O395]
gi|262169707|ref|ZP_06037398.1| hypothetical protein VIJ_002956 [Vibrio cholerae RC27]
gi|146316574|gb|ABQ21113.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227013604|gb|ACP09814.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|262021941|gb|EEY40651.1| hypothetical protein VIJ_002956 [Vibrio cholerae RC27]
Length = 215
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 59/161 (36%), Gaps = 28/161 (17%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L + ++ + L Q ++I++LG+ +
Sbjct: 1 MSKRLYQQIETLWDYLQLHQQPDV-ADLILVLGSNDVRVAE-----------------HA 42
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLD 156
+LY + ++ SGG + +E+ + ++ V I LETQS +
Sbjct: 43 AKLYHQ----GLAPYVLFSGGFGRFTQGVFNHSEAETFAAIAKDASVPEHAILLETQSTN 98
Query: 157 TFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ +N FS ++ + K I+LV Y +R+ F
Sbjct: 99 SGENLHFSHQLLVQQAWPAKRILLVQKPYMERRAYATFMQQ 139
>gi|78186865|ref|YP_374908.1| hypothetical protein Plut_1003 [Chlorobium luteolum DSM 273]
gi|78166767|gb|ABB23865.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
Length = 196
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 63/170 (37%), Gaps = 32/170 (18%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
Q ++ + + + G+ + +L + ++IV+LG
Sbjct: 3 QLLKTTINILLVAAILAGAGFLSLGFLLSCQAGTP-----------EKTDVIVILGG--- 48
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
S R+ + LY+ + +I++G D + + + +
Sbjct: 49 --------------DSGRRVRKGAELYR----NGYAPRVILTGIDERYYRPGKLNWRQKR 90
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++ GV I ++++S T++ A ++ +K K ++VS H+ R
Sbjct: 91 MVALGVPLSAISVDSRSETTWEEAFNTAETMKRNGWKKALVVSDPPHMFR 140
>gi|145346673|ref|XP_001417809.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578037|gb|ABO96102.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 228
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 18/137 (13%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV++ G T+PA + + + I++SG
Sbjct: 12 DAIVVVAGGIEDDGTLPAWVTPRLDYAAT--------AYANATADAKPRILLSGSMTPHK 63
Query: 127 GLA---------ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-NMQGKNI 176
ES + L++ GV D + +T S+DT NA +S + +
Sbjct: 64 PPPMAKGGFNLHESTSMASYLMDKGVPADSMLKDTASMDTIGNAYYSLCLHAIPRAWTRV 123
Query: 177 ILVSSAYHLKRSQLYFQ 193
+V+SA+H++R++ F+
Sbjct: 124 EVVTSAFHMERTRAAFE 140
>gi|121727311|ref|ZP_01680458.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|153830915|ref|ZP_01983582.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|229520700|ref|ZP_04410123.1| uncharacterized conserved protein [Vibrio cholerae TM 11079-80]
gi|121630317|gb|EAX62714.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|148873594|gb|EDL71729.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|229342255|gb|EEO07250.1| uncharacterized conserved protein [Vibrio cholerae TM 11079-80]
Length = 215
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 28/161 (17%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L + ++ + L Q ++I++LG+ +
Sbjct: 1 MSKRLYQQIETLWDYLQLHQQPDV-ADLILVLGSNDVRVAE-----------------HA 42
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLD 156
+LY + ++ SGG + +E+ + ++GV I LETQS +
Sbjct: 43 AKLYHQ----GLAPYVLFSGGFGRFTQGVFNHSEAETFAAIAKDAGVPEHAILLETQSTN 98
Query: 157 TFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ +N FS ++ + K I+LV Y +R+ F
Sbjct: 99 SGENLHFSHQLLVQQAWPAKRILLVQKPYMERRAYATFMQQ 139
>gi|300690675|ref|YP_003751670.1| hypothetical protein RPSI07_1014 [Ralstonia solanacearum PSI07]
gi|299077735|emb|CBJ50373.1| conserved protein of unknown function, DUF218 [Ralstonia
solanacearum PSI07]
Length = 190
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 64/177 (36%), Gaps = 30/177 (16%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
++IV+LG +S R+ LY + + + +SG
Sbjct: 43 PGHADVIVVLGG-----------------ESGQRVIGAAELYHA----GVAPRVFVSG-- 79
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ ++ +L+ +GV D I E +S T NA+ + + ++ +LV+S
Sbjct: 80 -----EGDCLLIVRRLVMAGVPADRIGHECESGSTMGNAEMTHRALTGQPVRSAVLVTSW 134
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
YH R+ F+ + + + + S Y + L EYI R
Sbjct: 135 YHTGRALEVFRQ--VWPEVTWGARGVFPGDTLAKSFPIYESGSILAEYIKRAWYAVR 189
>gi|209545516|ref|YP_002277745.1| hypothetical protein Gdia_3404 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209533193|gb|ACI53130.1| protein of unknown function DUF218 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 170
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 44/115 (38%), Gaps = 2/115 (1%)
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ P + + + + I +GG P E+ + + L +GV
Sbjct: 11 GAAVRPDGTPTATLRYRTEAAIAYGRTLPSPLFIPTGGSPDGRP-TEAALMADLLRAAGV 69
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGI 197
I +E + DT + +++++ + + + SSAYHL R + + G
Sbjct: 70 PDRAIVVEDTARDTLDSVLACTALLRARGCRGPVAVASSAYHLPRCLVLMRQAGW 124
>gi|239979284|ref|ZP_04701808.1| integral membrane protein [Streptomyces albus J1074]
Length = 254
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 16/136 (11%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+ G G EPS R+ LY++ + +++ GD +
Sbjct: 86 VVFGAGL--------WGEEPSPYLARRLDAAAELYEAGRTE-----VVLVTGDNSREEYD 132
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E L+ GV I + DT+ + + + +L+S +H+ R+
Sbjct: 133 EPEAMRRYLVARGVPDHRIVSDYAGFDTWDSCVRARKI---FGVDKAVLISQGFHIHRAV 189
Query: 190 LYFQHFGINTKASCSD 205
+ G+ D
Sbjct: 190 TLCRSAGLQAYGIGVD 205
>gi|297559450|ref|YP_003678424.1| hypothetical protein Ndas_0471 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296843898|gb|ADH65918.1| protein of unknown function DUF218 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 216
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 15/133 (11%)
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G PS R+ LY + K ++++G + +H E
Sbjct: 39 VLGAGVRPD-------GRPSLLLARRLDTAADLYFAGKVD----VVLVTGDNSVEH-YNE 86
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ L+++GV + I + T+ + + + + + +V+ +HL R+
Sbjct: 87 TDTMRAYLVDAGVPGEHIVGDYAGFSTWDSCVRAHEV---FGVREVTVVTQDFHLPRAVR 143
Query: 191 YFQHFGINTKASC 203
+ GI+
Sbjct: 144 LCRSAGIDAVGVA 156
>gi|162148717|ref|YP_001603178.1| hypothetical protein GDI_2945 [Gluconacetobacter diazotrophicus PAl
5]
gi|161787294|emb|CAP56888.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 170
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 44/115 (38%), Gaps = 2/115 (1%)
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
+ P + + + + I +GG P E+ + + L +GV
Sbjct: 11 GAAVRPDGTPTATLRHRTEAAIAYGRTLPSPLFIPTGGSPDGRP-TEAALMADLLRAAGV 69
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLYFQHFGI 197
I +E + DT + +++++ + + + SSAYHL R + + G
Sbjct: 70 PDRAIVVEDTARDTLDSVLACTALLRARGYRGPVAVASSAYHLPRCLVLMRQAGW 124
>gi|158426237|ref|YP_001527529.1| hypothetical protein AZC_4613 [Azorhizobium caulinodans ORS 571]
gi|158333126|dbj|BAF90611.1| uncharacterized conserved protein [Azorhizobium caulinodans ORS
571]
Length = 256
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/227 (16%), Positives = 77/227 (33%), Gaps = 54/227 (23%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ L F+G ++ T + + P K + IV+L
Sbjct: 27 FWLRRAALSLAFVSGTLALLFVGGFVVFTTAIAPRE---------PAGLKPADGIVVLTG 77
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G SRI + ++L S ++ISG ++ +
Sbjct: 78 G------------------ASRIADGVQLLASGHGQ----RLLISG---VNRATSQDEIR 112
Query: 135 N-----NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
LL+ V+ ++L+TF NA ++ + +++++V+SA+H+ R+
Sbjct: 113 RTLPDNEHLLDCCVDLGH-----RALNTFGNAIEAAEWTRAQGFRSLVVVTSAWHMPRAL 167
Query: 190 LYFQHF----GINTKASCSDYLNAYYSII-PLSANFYLTELALKEYI 231
+ + +D + + P + LKEY+
Sbjct: 168 VELGRALPEVELVAYPVVTDRMQSGGWWTDPQTVKL-----LLKEYL 209
>gi|297559448|ref|YP_003678422.1| hypothetical protein Ndas_0469 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296843896|gb|ADH65916.1| protein of unknown function DUF218 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 201
Score = 68.3 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 18/179 (10%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+ + L + +R + + + V+LG A PS
Sbjct: 10 AGACALALGPYAWTFLGSAGRRGEVDTVPHRP--VAVVLGA--------AAWNDGPSPLL 59
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
R+ +RLY++ + II+SG D ++ E+ L+ GV D I +
Sbjct: 60 ARRLDLAVRLYENGRVE----RIIVSG-DNREVSRRETDTMTAYLVAQGVPADRIDADRH 114
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
T+ + + +V+ ++HL R+ + GI+ + A
Sbjct: 115 GYRTWDTCVRVRDL---FGVREATMVTQSFHLPRTVALARAAGIDAVGVGDSSMGARRR 170
>gi|153837095|ref|ZP_01989762.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|149749683|gb|EDM60428.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
Length = 275
Score = 68.3 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 24/133 (18%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+++LG + + S + SR+ + + ++ GG Q +
Sbjct: 2 VIVLG--------KRLVNNQLSAEGISRVEALAAKIREMPMDNTA--LVFCGGKTQGQSI 51
Query: 129 AESIVYNNKL------LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN------- 175
+E+ L I LE +SL+TF+N + ++ ++
Sbjct: 52 SEADAMYAYFQTLNTSLAKPFPTSQILLENRSLNTFENMRNAAKVLCESGLFPLPSQAAV 111
Query: 176 -IILVSSAYHLKR 187
+IL+S+AYHL+R
Sbjct: 112 EVILLSNAYHLER 124
>gi|300778324|ref|ZP_07088182.1| SanA protein [Chryseobacterium gleum ATCC 35910]
gi|300503834|gb|EFK34974.1| SanA protein [Chryseobacterium gleum ATCC 35910]
Length = 205
Score = 68.3 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 68/174 (39%), Gaps = 25/174 (14%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
I ++LG P + + + P F R+ LY H II+SG
Sbjct: 45 PPREIALVLG----TSPKMRSGKSNPYFT--KRMDAAALLYH----HGKIKKIIVSG--E 92
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLET-QSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ G E N L+ +DI +E + +T+++ + K KN+I+VS
Sbjct: 93 KSKGYNEPGAMRNYLVNQEGVPEDIIVEDPKGFNTYKSILRCKDVYKK---KNVIIVSQG 149
Query: 183 YHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
YH R+ + ++ +N + + +FY + +E + +IA
Sbjct: 150 YHNLRALFFARNNDMNALGFDAQDVT-------KPESFYRNQA--REILARVIA 194
>gi|254469488|ref|ZP_05082893.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211961323|gb|EEA96518.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 205
Score = 68.3 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
+ +R+ +L++ + +++SGG+ + G E+ L+ GV + I LE
Sbjct: 43 SADARVQVAAQLWRD----RLVERVLVSGGEYAEIGQCEAHDMCKALVAQGVPKSHIILE 98
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNII 177
T++ +T +N FS ++K + +
Sbjct: 99 TRAANTGENVVFSMELLKELGIYKAV 124
>gi|262183735|ref|ZP_06043156.1| hypothetical protein CaurA7_07078 [Corynebacterium aurimucosum ATCC
700975]
Length = 170
Score = 68.3 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 54/128 (42%), Gaps = 15/128 (11%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P SR+ + + + + II+SG E+ L+E GV + I
Sbjct: 30 PGSLLRSRLDRAVVMARVLPEE----PIIVSGYG-------EAEPMARYLIERGVNPERI 78
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK--ASCSDY 206
LE + T +N + + ++ + + V++ +H+ R++L+ H GI + +
Sbjct: 79 FLEPLATSTNENLERAHALCSDYSYFRV--VTNDFHVLRTRLWAWHLGIRIRMHGVGTPR 136
Query: 207 LNAYYSII 214
+ ++ +
Sbjct: 137 KDRPWNYL 144
>gi|227505407|ref|ZP_03935456.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
gi|227198003|gb|EEI78051.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
Length = 133
Score = 68.3 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 55/137 (40%), Gaps = 28/137 (20%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ +L++ II+SG E+ V L+ GV ++I +E +
Sbjct: 5 RLERAFQLWRGQD-------IIVSG-------RGEAEVMEAYLIGRGVPAENIIVEPNAT 50
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T +N + S ++ + +V+S +H R++L+ H GI +A+
Sbjct: 51 STNENLENSHALYRAPYFD---VVTSDFHALRTKLWSWHLGI-----PVRVHSAFTPWEL 102
Query: 216 LSANFYLTELALKEYIG 232
N+ L+E +
Sbjct: 103 KPENY------LREVLA 113
>gi|227503142|ref|ZP_03933191.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
gi|227076203|gb|EEI14166.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
Length = 199
Score = 68.3 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 56/171 (32%), Gaps = 28/171 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+V+LG PS R+ L S +I GG
Sbjct: 7 YVVVLG--------TAQYDGRPSRILAGRLRHAGELA-----TSRGLPVITVGGQLPGDR 53
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ E+ V + L E + + LDT ++ +++I + I+V+ H R
Sbjct: 54 VTEAGVARDYLRE-HFPELQVSAVEEGLDTRESL---AAVIDAHGLADAIIVTDPLHRLR 109
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE-----YIGI 233
+ + + G+N S + Y A P E YIG+
Sbjct: 110 TWVIAKQEGLNASVSGTPYYPARRFSKPWWRYLA------HECGGLFYIGL 154
>gi|85713578|ref|ZP_01044568.1| hypothetical protein NB311A_03539 [Nitrobacter sp. Nb-311A]
gi|85699482|gb|EAQ37349.1| hypothetical protein NB311A_03539 [Nitrobacter sp. Nb-311A]
Length = 239
Score = 68.3 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/224 (18%), Positives = 81/224 (36%), Gaps = 35/224 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + + +F+G G+ L L+ +P+ + + IV+L
Sbjct: 16 MSARRRGMLLATLVAAAGIAFVGAGVGFVGFLSQLRGVETKPVN------NADGIVVLTG 69
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK--HGLAESI 132
G+ SRI + + L ++ISG P ++ S+
Sbjct: 70 GS------------------SRISDAVELLAG----GYGKRLLISGVHPTNGVSDISRSL 107
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ +LL V+ D +++T NA + + +++I+V+S YH+ R+ +
Sbjct: 108 PDSQQLLTCCVDLDR-----SAVNTRSNASETRRWVDEQGFRSLIVVTSNYHMPRAIVEL 162
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
H N + + P + L L EY+ L A
Sbjct: 163 SHAMPNVTLIPFAVIGDKWREEPWWTSGTTLRLLLSEYVKYLAA 206
>gi|56412371|ref|YP_149446.1| hypothetical protein SPA0101 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|56126628|gb|AAV76134.1| hypothetical protein SPA0101 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
Length = 165
Score = 68.3 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 46/107 (42%), Gaps = 12/107 (11%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ ++ G G + PS +R+ + LY+ + ++++GG
Sbjct: 71 ADCAIVAGAGVS--------GKTPSPVFQARLDHAIWLYQQHIIRA----LVLTGGYGAG 118
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++++ + +LE G+ I +E +S T +N +++ +++
Sbjct: 119 ATVSDAAIARQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQH 165
>gi|204927133|ref|ZP_03218335.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204323798|gb|EDZ08993.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 134
Score = 68.3 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 57/158 (36%), Gaps = 24/158 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + I +I ++ FI I + + ++ G
Sbjct: 1 MKYRYIIRIAAGIILIMATVFIHNAIA------------IYQFSQQNQTRVADCAIVAGA 48
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + PS +R+ + LY+ + ++++GG ++++ +
Sbjct: 49 GVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAGATVSDAAIA 96
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+LE G+ I +E +S T +N +++ +++
Sbjct: 97 RQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQH 134
>gi|197248860|ref|YP_002145083.1| hypothetical protein SeAg_B0110 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197212563|gb|ACH49960.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
Length = 165
Score = 68.3 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 57/159 (35%), Gaps = 24/159 (15%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + I +I ++ FI I + + ++ G
Sbjct: 31 FMKYRYIIRIAAGIILIMATVFIHNAIA------------IYQFSQQNQTRIADCAIVAG 78
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G + PS +R+ + LY+ + ++++GG ++++ +
Sbjct: 79 AGVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAGATVSDAAI 126
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+LE G+ I +E +S T +N +++ +++
Sbjct: 127 ARQYVLEKGIPVKAIFIEERSTVTRENIRYAKQILRQQH 165
>gi|315503734|ref|YP_004082621.1| hypothetical protein ML5_2953 [Micromonospora sp. L5]
gi|315410353|gb|ADU08470.1| protein of unknown function DUF218 [Micromonospora sp. L5]
Length = 211
Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 55/149 (36%), Gaps = 13/149 (8%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V L GT + P P+ +R+ +LY + K +++SG D
Sbjct: 40 VALVLGTKVEPD-----GTPAPFLAARLEIARQLYAAGKVQ----VLLLSG-DHMDWDYD 89
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E L+E GV + L+ DT+ + + + + +V+ ++HL R+
Sbjct: 90 EPDAMRRWLVERGVPAEKTVLDHAGFDTYDSCVRAHRV---FGVRRATVVTQSFHLPRAV 146
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSA 218
+ GI D Y +S+
Sbjct: 147 ALCRDAGIEAVGVGDDTARRYADQWRISS 175
>gi|269216159|ref|ZP_06160013.1| putative SanA protein [Slackia exigua ATCC 700122]
gi|269130418|gb|EEZ61496.1| putative SanA protein [Slackia exigua ATCC 700122]
Length = 228
Score = 68.0 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 62/192 (32%), Gaps = 15/192 (7%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+L ++ + + LF + + I+L + + IV+LG
Sbjct: 13 RVLRTFVKAFIKLVFTLALFGALVVAGLNGIVLLQAHDRVSTLAEAESEGLKADCIVVLG 72
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
++ S R+ + LY S +I+ GD + E +
Sbjct: 73 ASVLSDGSL-------SPILAHRVDAAVELY-----ESGAAPVIVMSGDGRASNYDEPLH 120
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ GV I + TF + + + + I V+ YHL R+
Sbjct: 121 MKEYAMSKGVPESAIVCDEGGYHTFDSMWRCAHV---YGASSAIAVTQEYHLSRAVFDGV 177
Query: 194 HFGINTKASCSD 205
G++T SD
Sbjct: 178 GTGMDTYGVISD 189
>gi|329847903|ref|ZP_08262931.1| hypothetical protein ABI_09720 [Asticcacaulis biprosthecum C19]
gi|328842966|gb|EGF92535.1| hypothetical protein ABI_09720 [Asticcacaulis biprosthecum C19]
Length = 220
Score = 68.0 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 72/201 (35%), Gaps = 46/201 (22%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ ++L G + +++ P + P+ + + IV+L
Sbjct: 2 RSLIAFLVVVLLWAAGLLVFADRVIES------TPAIEPE--EPADAIVVL--------- 44
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG-----GDPQKHGLAESIVYNN 136
+ S R+ E MRL + K + ISG P+ + E +
Sbjct: 45 --------TGASDMRLKEGMRLLERRKGE----RLFISGVNRDVKRPELMDVTEG---SK 89
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH-- 194
+L E V+ L Q+ +T QNA+ + + +I+V+S YH+ RS L +
Sbjct: 90 RLYECCVD-----LGYQAENTVQNAREIAEWARGHDFDTLIVVTSDYHMPRSLLELKADM 144
Query: 195 --FGINTKASCSDYLNAYYSI 213
+ + L+A
Sbjct: 145 PDAHFISYPVPTADLSARDWW 165
>gi|2251115|dbj|BAA21122.1| hypothetical protein [Escherichia coli W3110]
Length = 170
Score = 68.0 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 14/136 (10%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK--KDG 66
+ W Q KIF +S L + + LL+ ++ +Y P W +
Sbjct: 27 LALLWFSRFQKTGKIF-ISIGWLALLLLSLQPVADRLLRPIESTY------PTWNNSQKV 79
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+LG G T P A S R+ E +RL++ + +I +GG + +
Sbjct: 80 DYIVVLGGGNTWNP-QWAPSSNLINNSLPRLNEGIRLWRE----NPGSKLIFTGGVAKTN 134
Query: 127 GLAESIVYNNKLLESG 142
++ + V
Sbjct: 135 TVSTAEVGARVAQSLA 150
>gi|282854897|ref|ZP_06264231.1| conserved hypothetical protein [Propionibacterium acnes J139]
gi|282582043|gb|EFB87426.1| conserved hypothetical protein [Propionibacterium acnes J139]
gi|314924379|gb|EFS88210.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1]
gi|314981627|gb|EFT25720.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3]
gi|315092266|gb|EFT64242.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4]
gi|315094842|gb|EFT66818.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1]
gi|327328685|gb|EGE70445.1| putative integral membrane protein [Propionibacterium acnes
HL103PA1]
Length = 206
Score = 68.0 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 61/179 (34%), Gaps = 22/179 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+C + +G + L SY + + IVL G ++P+
Sbjct: 1 MSTCIAAFVALLGPWTLAAAL------SYGKVHDVADTEPRDVAIVL---GAQVLPS--- 48
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
PS R+ LY+S K +I+ GD ++ E V L+ GV
Sbjct: 49 --GTPSAYLRGRLDVAADLYRSGK-----AKVILVSGDNRETHYNEPKVMKTYLVSKGVP 101
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
I + LDT+ + + I+V+ YH R+ + G++
Sbjct: 102 AARIVEDFAGLDTYDTCVRARRI---FGVDRAIMVTQDYHEIRTVATCRMTGLDAVGVP 157
>gi|25027301|ref|NP_737355.1| hypothetical protein CE0745 [Corynebacterium efficiens YS-314]
gi|23492582|dbj|BAC17555.1| hypothetical protein [Corynebacterium efficiens YS-314]
Length = 143
Score = 68.0 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 54/135 (40%), Gaps = 15/135 (11%)
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
SR+ L + S +++SG E+ + L + GV + I E
Sbjct: 16 ASRLDRAAELAGA----SGAVAVVVSG-------RGEAAAMADYLRDLGV--ETIIEEPH 62
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
+ T +N + + +++ + + +V+S +H R+ L+ H GI + + +
Sbjct: 63 ATSTNENLENAHALLPDT--RRWTVVTSDFHAWRTYLWAWHLGIPITVVTAPTPLSVRTQ 120
Query: 214 IPLSANFYLTELALK 228
+ L L AL+
Sbjct: 121 MFLRECLALPHSALR 135
>gi|15641702|ref|NP_231334.1| hypothetical protein VC1698 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121586956|ref|ZP_01676735.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|153817136|ref|ZP_01969803.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153821818|ref|ZP_01974485.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|227081847|ref|YP_002810398.1| hypothetical protein VCM66_1638 [Vibrio cholerae M66-2]
gi|229508193|ref|ZP_04397698.1| hypothetical protein VCF_003427 [Vibrio cholerae BX 330286]
gi|229511569|ref|ZP_04401048.1| hypothetical protein VCE_002978 [Vibrio cholerae B33]
gi|229518708|ref|ZP_04408151.1| hypothetical protein VCC_002733 [Vibrio cholerae RC9]
gi|229607766|ref|YP_002878414.1| hypothetical protein VCD_002680 [Vibrio cholerae MJ-1236]
gi|254848817|ref|ZP_05238167.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255744877|ref|ZP_05418827.1| hypothetical protein VCH_001204 [Vibrio cholera CIRS 101]
gi|262161840|ref|ZP_06030858.1| hypothetical protein VIG_003008 [Vibrio cholerae INDRE 91/1]
gi|298498223|ref|ZP_07008030.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9656215|gb|AAF94848.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548791|gb|EAX58836.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|126512285|gb|EAZ74879.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126520616|gb|EAZ77839.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|227009735|gb|ACP05947.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|229343397|gb|EEO08372.1| hypothetical protein VCC_002733 [Vibrio cholerae RC9]
gi|229351534|gb|EEO16475.1| hypothetical protein VCE_002978 [Vibrio cholerae B33]
gi|229355698|gb|EEO20619.1| hypothetical protein VCF_003427 [Vibrio cholerae BX 330286]
gi|229370421|gb|ACQ60844.1| hypothetical protein VCD_002680 [Vibrio cholerae MJ-1236]
gi|254844522|gb|EET22936.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255737348|gb|EET92743.1| hypothetical protein VCH_001204 [Vibrio cholera CIRS 101]
gi|262028572|gb|EEY47227.1| hypothetical protein VIG_003008 [Vibrio cholerae INDRE 91/1]
gi|297542556|gb|EFH78606.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 215
Score = 68.0 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 59/161 (36%), Gaps = 28/161 (17%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L + ++ + L Q ++I++LG+ +
Sbjct: 1 MSKRLYQQIETLWDYLQLHQQPNV-ADLILVLGSNDVRVAE-----------------HA 42
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLD 156
+LY + ++ SGG + E+ + ++GV I LETQS +
Sbjct: 43 AKLYHQ----GLAPYVLFSGGFGRFTQGVFNHNEAETFAAIAKDAGVPEHAILLETQSTN 98
Query: 157 TFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ +N FS ++ + K I+LV Y +R+ F
Sbjct: 99 SGENLHFSHQLLVQQARPAKRILLVQKPYMERRAYATFMQQ 139
>gi|311894949|dbj|BAJ27357.1| hypothetical protein KSE_15300 [Kitasatospora setae KM-6054]
Length = 240
Score = 68.0 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 53/141 (37%), Gaps = 16/141 (11%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ + V+ G G EPS R+ + LY++ K + I+++G +
Sbjct: 63 PEAPVAVVFGAGLVD--------GEPSPYLAHRLDAALELYRAHKVRA----ILVTGDNG 110
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E+ L+ GV + + DT+ + + + +LVS +
Sbjct: 111 TVQ-YDETDAMRGYLIGRGVPAVRVVGDYAGFDTWDSCTRAHRI---FGVDRAVLVSQTF 166
Query: 184 HLKRSQLYFQHFGINTKASCS 204
H++R+ + GI+ A
Sbjct: 167 HVRRALALCEAAGIDAYAVGV 187
>gi|262275212|ref|ZP_06053022.1| hypothetical protein VHA_002194 [Grimontia hollisae CIP 101886]
gi|262220457|gb|EEY71772.1| hypothetical protein VHA_002194 [Grimontia hollisae CIP 101886]
Length = 194
Score = 68.0 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 11/107 (10%)
Query: 96 RIFE-TMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKL 150
R+ E LY+ + +++SGG + E+ + + L + GV I L
Sbjct: 20 RVAEYAAELYR----KELAPYLLVSGGRGRFTEYIFDKTEAETFADILCDEGVPASAILL 75
Query: 151 ETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHF 195
ET++ ++ QN S +++K+ ILV + +R+ F
Sbjct: 76 ETKATNSGQNMTLSYNVMKDHGLVFSRFILVQKPFMERRAYATFMKQ 122
>gi|325676948|ref|ZP_08156620.1| membrane protein [Rhodococcus equi ATCC 33707]
gi|325552248|gb|EGD21938.1| membrane protein [Rhodococcus equi ATCC 33707]
Length = 218
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 8/127 (6%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
P R+ T RL + K +++SG + G E L+E GV R
Sbjct: 56 RPMKFLQGRLDTTARLVRDGKV----AVVLVSGDAHGRSGD-EIAAMVEYLVEVGVPRTS 110
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I + LDT+ ++ +N + V+ +HL R+ + GI +
Sbjct: 111 IVADPYGLDTYDTCVRAAE---TFGIRNALFVTQPFHLPRTVALARAAGIEAHGVYAGRA 167
Query: 208 NAYYSII 214
S +
Sbjct: 168 GGRRSTL 174
>gi|318081213|ref|ZP_07988545.1| integral membrane protein [Streptomyces sp. SA3_actF]
Length = 353
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 54/140 (38%), Gaps = 16/140 (11%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ V+ G G +PS R+ RLY + + + ++++G D
Sbjct: 26 RAPVAVVFGAGLWD--------GKPSPYLAHRLDAAARLYAAGRVTA----VLVTG-DNS 72
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E + L +GV R + + DT+ + + + +LVS +H
Sbjct: 73 RTSYDEPTAMRDYLARAGVPRRQVVRDYAGFDTWDSCVRAHRV---FGVDRAVLVSQGFH 129
Query: 185 LKRSQLYFQHFGINTKASCS 204
++R+ + GI+ + +
Sbjct: 130 IRRAVALCRAAGIDAQGVAA 149
>gi|213053169|ref|ZP_03346047.1| hypothetical protein Salmoneentericaenterica_09720 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213419445|ref|ZP_03352511.1| hypothetical protein Salmonentericaenterica_17201 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213427543|ref|ZP_03360293.1| hypothetical protein SentesTyphi_19281 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213582272|ref|ZP_03364098.1| hypothetical protein SentesTyph_14144 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213646888|ref|ZP_03376941.1| hypothetical protein SentesTy_06019 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213857319|ref|ZP_03384290.1| hypothetical protein SentesT_19260 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289826173|ref|ZP_06545285.1| hypothetical protein Salmonellentericaenterica_12365 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
Length = 134
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 46/107 (42%), Gaps = 12/107 (11%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ ++ G G + PS +R+ + LY+ + ++++GG
Sbjct: 40 ADCAIVAGAGVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAG 87
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++++ + +LE G+ I +E +S T +N +++ +++
Sbjct: 88 ATVSDAAIARQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQH 134
>gi|228997721|ref|ZP_04157328.1| hypothetical protein bmyco0003_22930 [Bacillus mycoides Rock3-17]
gi|229009077|ref|ZP_04166416.1| hypothetical protein bmyco0002_57970 [Bacillus mycoides Rock1-4]
gi|228752247|gb|EEM01936.1| hypothetical protein bmyco0002_57970 [Bacillus mycoides Rock1-4]
gi|228762065|gb|EEM11004.1| hypothetical protein bmyco0003_22930 [Bacillus mycoides Rock3-17]
Length = 184
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
+ P + + LYK + I+ SGG + G E N + +GV +
Sbjct: 25 LIPGANHPPLMEKAASLYKQ----GLAPYILPSGGYKPQVGTTEWDFLRNIGIANGVPEE 80
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
I E Q+ T +NA+ S +++N K I+V A H +R+ L +Q
Sbjct: 81 AILKEDQAQHTLENARLSLEVLQNTGIDPKKAIIVCKAGHSRRALLCYQA 130
>gi|291439794|ref|ZP_06579184.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291342689|gb|EFE69645.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 233
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 60/189 (31%), Gaps = 27/189 (14%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ + + +C + L + L+ + + V+ G G
Sbjct: 18 RRRLTQAVMAACVLALLPATWLHLAADGRLR-----------TTADVPRTEVAVVFGAGL 66
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
EPS R+ + LY++ + +++ GD + E
Sbjct: 67 WD--------GEPSPYLARRLDAAVELYRAGRIE-----VVLVTGDNSREEYDEPDAMRA 113
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L GV I + DT+ + + + +L+S +H++R+ G
Sbjct: 114 YLTRHGVPDARIVSDYAGFDTWDSCVRAKKV---FGVDRAVLISQGFHIRRAVALCGAAG 170
Query: 197 INTKASCSD 205
+++ D
Sbjct: 171 VSSYGVGVD 179
>gi|255505150|ref|ZP_05344767.3| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
gi|255269303|gb|EET62508.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
Length = 222
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 51/133 (38%), Gaps = 20/133 (15%)
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG-----GDPQKHGLA-- 129
P I P LY + I+ SG GD L+
Sbjct: 40 EDAPQEADIIFIPGSGYGELALRAAELYHQ----KLAGQIVASGKYSILGDSFAGPLSPQ 95
Query: 130 ---------ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
ES L+E GV R + E Q+ T++NA +++ +++ + +LV
Sbjct: 96 EYVGKSYETESDFLTAVLVERGVPRSAVLQEKQATYTYENAIYTAKLLEGRTIRRALLVC 155
Query: 181 SAYHLKRSQLYFQ 193
A+H +RS LY++
Sbjct: 156 QAFHARRSLLYYK 168
>gi|168998459|ref|YP_001687731.1| hypothetical protein pSA11_00005 [Streptomyces cyaneus]
Length = 221
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 57/135 (42%), Gaps = 6/135 (4%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + P ++ I + LYK + T S ++ E++ Y
Sbjct: 20 GHSPRPC--SVAIGLGSHDLGVADTAVDLYKRGMVPLLLFTGATSPTTRERMPRGEAVHY 77
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYF 192
+ +E GV D+ +E ++ +T +N +FS +++ + +++L+S Y +R+
Sbjct: 78 RERAVELGVPSSDVLVEPRARNTGENIRFSRELLEEAGVEVSSVLLISKPYEERRAYATA 137
Query: 193 QHF--GINTKASCSD 205
+ G+ ++ S
Sbjct: 138 RKLWPGVEVVSASSP 152
>gi|239940966|ref|ZP_04692903.1| putative integral membrane protein [Streptomyces roseosporus NRRL
15998]
gi|239987444|ref|ZP_04708108.1| putative integral membrane protein [Streptomyces roseosporus NRRL
11379]
Length = 245
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 16/157 (10%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+ G G P + R+ LY++ K +++ GD +
Sbjct: 76 VVFGAGLWNGRPTPYL--------AHRLDAAAELYRTGKV-----KVVLVTGDNSRVEYD 122
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E L GV + I + D++ + + + +LVS +H+ R+
Sbjct: 123 EPDAMRTYLTGRGVPDERIVSDYAGFDSWDSCVRAKKI---FGVDRAVLVSQGFHIHRAV 179
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
+ GI+ D + A
Sbjct: 180 TLCRSAGIDAYGVGVDEPRDSVWYYGGVRELAASGKA 216
>gi|239931421|ref|ZP_04688374.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 208
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 49/142 (34%), Gaps = 16/142 (11%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ V+ G G EPS R+ + LY++ + +++ GD
Sbjct: 29 PRTEVAVVFGAGLWD--------GEPSPYLARRLDAAVELYRAGRIE-----VVLVTGDN 75
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ E L GV I + DT+ + + + +L+S +
Sbjct: 76 SREEYDEPDAMRAYLTRHGVPDARIVSDYAGFDTWDSCVRAKKV---FGVDRAVLISQGF 132
Query: 184 HLKRSQLYFQHFGINTKASCSD 205
H++R+ G+++ D
Sbjct: 133 HIRRAVALCGAAGVSSYGVGVD 154
>gi|50843568|ref|YP_056795.1| OmpA family membrane associated protein [Propionibacterium acnes
KPA171202]
gi|50841170|gb|AAT83837.1| conserved membrane-associated protein (OmpA family)
[Propionibacterium acnes KPA171202]
Length = 228
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 62/185 (33%), Gaps = 22/185 (11%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
IR +C + +G + L SY + + IVL G +
Sbjct: 17 PIRTAIVSTCIAAFVALLGPWTLAAAL------SYGKVHDVADTEPRDVAIVL---GAQV 67
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+P+ PS R+ LY+S K +I+ GD ++ E V L
Sbjct: 68 LPS-----GTPSAYLRGRLDVAADLYRSGK-----AKVILVSGDNRETHYNEPKVMKTYL 117
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ GV I + L T+ + + I+V+ YH R+ + G++
Sbjct: 118 VSKGVPAARIVEDFAGLGTYDTCVRARRI---FGVDRAIMVTQDYHEIRTVATCRMTGLD 174
Query: 199 TKASC 203
Sbjct: 175 AVGVP 179
>gi|86147081|ref|ZP_01065398.1| hypothetical protein MED222_12213 [Vibrio sp. MED222]
gi|85835146|gb|EAQ53287.1| hypothetical protein MED222_12213 [Vibrio sp. MED222]
Length = 225
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 11/107 (10%)
Query: 96 RIFE-TMRLYKSCKQHSMHCTIIISGGDPQ----KHGLAESIVYNNKLLESGVERDDIKL 150
R+ E LY + I+ SGG + +E+ + + +SGV DI +
Sbjct: 51 RVAEYAAELYHQ----KIAPYIVFSGGMGRFTEGSFERSEAETFASIARDSGVPDLDIII 106
Query: 151 ETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHF 195
E + +T +N +F+ ++ K + LV + KR+ F
Sbjct: 107 EKHATNTGENVRFTYELLAQRGLSPKRLTLVQKPFMEKRTYATFCKQ 153
>gi|291444403|ref|ZP_06583793.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
gi|291347350|gb|EFE74254.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
Length = 249
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 16/157 (10%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+ G G P + R+ LY++ K +++ GD +
Sbjct: 80 VVFGAGLWNGRPTPYL--------AHRLDAAAELYRTGKV-----KVVLVTGDNSRVEYD 126
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E L GV + I + D++ + + + +LVS +H+ R+
Sbjct: 127 EPDAMRTYLTGRGVPDERIVSDYAGFDSWDSCVRAKKI---FGVDRAVLVSQGFHIHRAV 183
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
+ GI+ D + A
Sbjct: 184 TLCRSAGIDAYGVGVDEPRDSVWYYGGVRELAASGKA 220
>gi|239941429|ref|ZP_04693366.1| hypothetical protein SrosN15_10566 [Streptomyces roseosporus NRRL
15998]
gi|239987894|ref|ZP_04708558.1| hypothetical protein SrosN1_11350 [Streptomyces roseosporus NRRL
11379]
gi|291444872|ref|ZP_06584262.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291347819|gb|EFE74723.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 215
Score = 67.6 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ I+ +G E++ Y + +E GV + +E ++ +
Sbjct: 40 ADAAAGFYLRGLAPVIVFTGSTSPTTREHMPRGEAVHYRERAVELGVPESAVLVEPKARN 99
Query: 157 TFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHF--GINTKASCSD 205
T +N +FS ++++ +++LVS Y +R+ + G++ ++ S
Sbjct: 100 TGENIRFSRALLEEAGVDVSSVLLVSKPYEERRAYATARKLWPGVDVVSASSP 152
>gi|189500318|ref|YP_001959788.1| hypothetical protein Cphamn1_1378 [Chlorobium phaeobacteroides BS1]
gi|189495759|gb|ACE04307.1| protein of unknown function DUF218 [Chlorobium phaeobacteroides
BS1]
Length = 196
Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 60/150 (40%), Gaps = 24/150 (16%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+I ++ L + P+ ++I++LG R+
Sbjct: 15 SSVIGVLVFAGLGYLVSSYQSKPE---KADVIIVLGG-----------------DDGPRV 54
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ L+ + + ++++G D + + + +L E+GV + I ++T S T
Sbjct: 55 DKGGSLFNAGYAPN----VVLTGIDSRYYRPSRPNWRERRLAEAGVPQTAINVDTTSETT 110
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
++ A S +M++ N I+VS H+ R
Sbjct: 111 WEEALNSVAMMQEKGWNNAIVVSDPPHMLR 140
>gi|302520985|ref|ZP_07273327.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|302429880|gb|EFL01696.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length = 223
Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 52/123 (42%), Gaps = 10/123 (8%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQ 153
LY++ + T++ +GG+ E++ ++ L GV + LE +
Sbjct: 48 TYAADLYRA----GLFPTLVFTGGNSSDTLGAFPRGEAVHFHEHALALGVPAHAMLLEPR 103
Query: 154 SLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
+ +T QN F+ + ++++LV+ Y +R+ F+ + C+ ++
Sbjct: 104 AANTGQNIAFARETLAAAGVRPRSVLLVTMPYMERRAFATFRKQWPEVEVVCASDPLSFD 163
Query: 212 SII 214
S +
Sbjct: 164 SYL 166
>gi|327402127|ref|YP_004342965.1| hypothetical protein Fluta_0117 [Fluviicola taffensis DSM 16823]
gi|327317635|gb|AEA42127.1| protein of unknown function DUF218 [Fluviicola taffensis DSM 16823]
Length = 231
Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 56/171 (32%), Gaps = 13/171 (7%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
FSF+ ++ S + K + I++ P +P S
Sbjct: 6 FSFLSLLVMVLSACGIFSPSPLKTNQKSLKKAPYDAIIV--------PGVPFDGKHWSET 57
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
R+ LY+ + II SG E+ V G+ ++ I +
Sbjct: 58 MKMRVQWGAYLYRKGVTKN----IIYSGSSVYTEYE-EAAVMALYGEALGIPKEHIFTDP 112
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
++ T +N +S + K + I L + + L + + + F +
Sbjct: 113 RAEHTTENIYYSYRVAKKNGFQKIALATDPFQLNGMRKFIKKFDLPVDLLP 163
>gi|302869784|ref|YP_003838421.1| hypothetical protein Micau_5339 [Micromonospora aurantiaca ATCC
27029]
gi|302572643|gb|ADL48845.1| protein of unknown function DUF218 [Micromonospora aurantiaca ATCC
27029]
Length = 237
Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 55/149 (36%), Gaps = 13/149 (8%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V L GT + P P+ +R+ +LY + K +++SG D
Sbjct: 66 VALVLGTKVEPD-----GTPAPFLAARLEIARQLYAAGKVQ----VLLLSG-DHMDWDYD 115
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E L+E GV + L+ DT+ + + + + +V+ ++HL R+
Sbjct: 116 EPDAMRRWLVERGVPAEKTVLDHAGFDTYDSCVRAHRV---FGVRRATVVTQSFHLPRAV 172
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSA 218
+ GI D Y +S+
Sbjct: 173 ALCRDAGIEAVGVGDDTARRYADQWRISS 201
>gi|290956634|ref|YP_003487816.1| hypothetical protein SCAB_21381 [Streptomyces scabiei 87.22]
gi|260646160|emb|CBG69253.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 221
Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 50/127 (39%), Gaps = 12/127 (9%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAE 130
G + P ++ I T LY M I+ +G + E
Sbjct: 20 GHELRPC--SVAIGLGSHDLGVADTTADLYH----RGMAPLIVFTGATSRTTRERMPRGE 73
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRS 188
+ Y ++ +E GV I +E ++ +T +N + S ++++ +++LVS Y +R+
Sbjct: 74 AEHYRDRAVELGVPASAIIVEPKARNTGENIRLSRALLEEQRVPVSSVLLVSKPYEERRA 133
Query: 189 QLYFQHF 195
+
Sbjct: 134 YATARKL 140
>gi|228969746|ref|ZP_04130516.1| hypothetical protein bthur0004_64000 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228789968|gb|EEM37780.1| hypothetical protein bthur0004_64000 [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 103
Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
++ GV+ +DI +ET+SL T +N + + + + +VS H+KR+ +H I
Sbjct: 1 MKQGVKEEDILIETKSLFTEENLKNAKQVGIENGIQTYTIVSDPLHMKRAMRIAKHINIE 60
Query: 199 TKASCSD 205
AS +
Sbjct: 61 AYASPTP 67
>gi|46861|emb|CAA33876.1| putative polycistronic operon [Streptomyces coelicolor]
Length = 203
Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 12/137 (8%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD----PQKHGLAE 130
G P ++ I T LY M I+ +G ++ E
Sbjct: 2 GHEPHPC--SVAIGLGSHDLGVAETTAELYH----RGMAPVIVFTGATSRTTHERMPRGE 55
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRS 188
+ Y + +E GV I +E + +T +N + S ++++++ +++LVS Y +R+
Sbjct: 56 AEHYRERAVELGVPERAILVEPNARNTGENIRLSRALLEDLGMPVTSVLLVSKPYEERRA 115
Query: 189 QLYFQHFGINTKASCSD 205
+ N + C
Sbjct: 116 YATARKLWPNVEWVCVS 132
>gi|269965633|ref|ZP_06179746.1| hypothetical protein VMC_11760 [Vibrio alginolyticus 40B]
gi|269829701|gb|EEZ83937.1| hypothetical protein VMC_11760 [Vibrio alginolyticus 40B]
Length = 280
Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
NI+++LG + + + +R+ E + ++ + II GG Q
Sbjct: 4 DNIVIVLG--------KRLVNNRLTSEGITRV-EALSC-RTASLPTERTAIIFCGGVTQG 53
Query: 126 HGLAESIVYNNKLLESG------VERDDIKLETQSLDTFQNAQFSSSMIKNMQ------- 172
++E+ I LET+SL+TFQN ++ S ++
Sbjct: 54 QSVSEAEAMYAYFRTLNADSVNPFPERHILLETESLNTFQNMRYVSQVLCKSGLFELWSG 113
Query: 173 -GKNIILVSSAYHLKR 187
+IL+S+ YHL+R
Sbjct: 114 HPVEVILLSNDYHLER 129
>gi|13473042|ref|NP_104609.1| hypothetical protein mlr3524 [Mesorhizobium loti MAFF303099]
gi|14023790|dbj|BAB50395.1| mlr3524 [Mesorhizobium loti MAFF303099]
Length = 241
Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/212 (20%), Positives = 75/212 (35%), Gaps = 44/212 (20%)
Query: 22 KIFFMSCFMLLFSFIG-WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+I +S +L F G +G + L +P + + I++L G
Sbjct: 36 RISALSLLILAVLFAGGFGWFANKVAH---------LTTPANPEKADAIIVLTGG----- 81
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG--GDPQKHGLAESIVYNNKL 138
SR+ M L S K ++ISG + L + + L
Sbjct: 82 -------------QSRLDAAMDLLASGKGE----RLLISGVHPSASRRQLQAATGGDKNL 124
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--G 196
V+ D +LDT NA+ S+ +++ +ILV++ YH+ RS L G
Sbjct: 125 FSCCVDIDR-----AALDTIGNAEESAKWVESHAYGTVILVTNNYHMPRSLLEMGRLLHG 179
Query: 197 INTKASC---SDYLNAYYSIIPLSANFYLTEL 225
+ S+ N + P + TE
Sbjct: 180 AKLEPYPVVNSNLDNGGWLTKPRALRVLFTEY 211
>gi|91224210|ref|ZP_01259473.1| hypothetical protein V12G01_02965 [Vibrio alginolyticus 12G01]
gi|91191121|gb|EAS77387.1| hypothetical protein V12G01_02965 [Vibrio alginolyticus 12G01]
Length = 280
Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
NI+++LG + + + +R+ E + ++ + II GG Q
Sbjct: 4 DNIVIVLG--------KRLVNNRLTSEGITRV-EALSC-RTASLPTERTAIIFCGGVTQG 53
Query: 126 HGLAESIVYNNKLLESG------VERDDIKLETQSLDTFQNAQFSSSMIKNMQ------- 172
++E+ I LET+SL+TFQN ++ S ++
Sbjct: 54 QSVSEAEAMYAYFRTLNADSVNPFPERHILLETESLNTFQNMRYVSQVLCKSGLFELWSG 113
Query: 173 -GKNIILVSSAYHLKR 187
+IL+S+ YHL+R
Sbjct: 114 HPVEVILLSNDYHLER 129
>gi|114327106|ref|YP_744263.1| hypothetical protein GbCGDNIH1_0442 [Granulibacter bethesdensis
CGDNIH1]
gi|114315280|gb|ABI61340.1| hypothetical protein GbCGDNIH1_0442 [Granulibacter bethesdensis
CGDNIH1]
Length = 183
Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
SP+ + IV+ G + P + + + Q +
Sbjct: 4 PSPRPGQRPC-IVIFGA-----------AVHPGGIPSPTLRRRVEAAHALGQTIPDVLFM 51
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KN 175
+GG + HG AE+ + LL GV I +E DT +A+ +++++
Sbjct: 52 PTGGVGR-HGPAEAEIMRRLLLTLGVSDAAILMEPTGTDTLSSAKAVAALLREDGACHAP 110
Query: 176 IILVSSAYHLKRSQLYFQ 193
+ + +S YH+ R +
Sbjct: 111 VFVATSRYHMGRCVTLLR 128
>gi|322709982|gb|EFZ01557.1| hypothetical protein MAA_02786 [Metarhizium anisopliae ARSEF 23]
Length = 225
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKLETQ 153
R + +I SG Q E+ + + GV D + +E +
Sbjct: 38 TRVARRAAQLYLDGLAPMLIFSGASGQLTAGRFAKTEAETFADVARAMGVPGDRVVVEPR 97
Query: 154 SLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHF 195
+ +T +N +F+ ++++ M +++ILV Y +R+ F+
Sbjct: 98 ATNTGENVRFTHALLQGMGLRPESLILVQKPYMERRTYATFRKQ 141
>gi|21223012|ref|NP_628791.1| hypothetical protein SCO4629 [Streptomyces coelicolor A3(2)]
gi|20455525|sp|Q04310|Y4629_STRCO RecName: Full=Uncharacterized protein SCO4629
gi|10129725|emb|CAC08282.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 221
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 12/137 (8%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD----PQKHGLAE 130
G P ++ I T LY M I+ +G ++ E
Sbjct: 20 GHEPHPC--SVAIGLGSHDLGVAETTAELYH----RGMAPVIVFTGATSRTTHERMPRGE 73
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRS 188
+ Y + +E GV I +E + +T +N + S ++++++ +++LVS Y +R+
Sbjct: 74 AEHYRERAVELGVPERAILVEPNARNTGENIRLSRALLEDLGMPVTSVLLVSKPYEERRA 133
Query: 189 QLYFQHFGINTKASCSD 205
+ N + C
Sbjct: 134 YATARKLWPNVEWVCVS 150
>gi|318040905|ref|ZP_07972861.1| hypothetical protein SCB01_04324 [Synechococcus sp. CB0101]
Length = 228
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/244 (17%), Positives = 85/244 (34%), Gaps = 32/244 (13%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII-- 69
W + + ++ F +L IG+G++ +L L + ++ LL+ I
Sbjct: 2 LWIQWREPLLQLLFTPWLLLPLVAIGFGLVLCLLPWSLPWPWRALLLTTLVLLSSGIYSP 61
Query: 70 ----VL---LGNGTTIIPTIPAIRIEPSFQSYSR----IFETMRLYKSCKQHSMHCTIII 118
++ L + R P R T + + +
Sbjct: 62 AATDLMSRWLTARQPDSAVTASHRPLPLAVLLGRGPQIAQATTAEAARQLNSNAVAVVYV 121
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI-KNMQGKNII 177
SG P +LL GV + + ++ + T++NA +S + ++ G ++
Sbjct: 122 SGHQPST---------AQRLLRLGVPPERVAGDSCARTTWENATHTSLWLQRHYPGAAVL 172
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
L++ + L R+ F H G+ + P + LAL+E G L+
Sbjct: 173 LITDPWQLPRAARAFAHQGLTVWPLAVE---------PRLSARERNRLALRETAGTLLYA 223
Query: 238 YRGN 241
+G
Sbjct: 224 LQGR 227
>gi|226355611|ref|YP_002785351.1| hypothetical protein Deide_07400 [Deinococcus deserti VCD115]
gi|226317601|gb|ACO45597.1| Conserved hypothetical protein, precursor [Deinococcus deserti
VCD115]
Length = 190
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 14/153 (9%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
S + + I + F L +P+ +V+LG PS
Sbjct: 6 STLSLLPVMIIAVLAASFVLSSGLRAPRAVTPHPTLVVLGA--------AQYAGRPSPAF 57
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
R+ +RLY++ I+++GG +E V L GV + ET+
Sbjct: 58 ERRLIHALRLYRAGGVE----RIVVTGGRRPGDPYSEGEVGVTFLAFHGVPAQALLAETR 113
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
S T +N + + + + + LV+ H
Sbjct: 114 SRTTIENLRNARTSLPPQ--TPVTLVTDEAHTP 144
>gi|269795287|ref|YP_003314742.1| hypothetical protein Sked_19840 [Sanguibacter keddieii DSM 10542]
gi|269097472|gb|ACZ21908.1| uncharacterized conserved protein [Sanguibacter keddieii DSM 10542]
Length = 203
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 64/164 (39%), Gaps = 19/164 (11%)
Query: 34 SFIGWGIIPTILLKHLQFSYQ---RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
S +G ++ +L+ + ++ R L S D +V+LG P+
Sbjct: 8 SLVGIAVLGAVLVAGEVYDWRESRRALGSAPGPGDREAVVVLG--------YRNRGSRPN 59
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
+ R+ +R +++SGG + E+ V G R + +
Sbjct: 60 VVNRQRVRAGLR----SVDPEAETVLVMSGGAVAGS-VPEAEVMAAYARSLGY-RGRLLV 113
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
ET+S T++N Q +++ I +VS+A H R++ +
Sbjct: 114 ETESRSTWENVQNVVPVLE--GADRIKIVSTAAHASRAREMLRA 155
>gi|239833000|ref|ZP_04681329.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825267|gb|EEQ96835.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 302
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 75/208 (36%), Gaps = 41/208 (19%)
Query: 4 SWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK 63
++++ ++ Q + + F+ L F+ +G T + P
Sbjct: 85 NFLWSVMMRMFRRFQPVSIVLFVILLAFLVGFVAFGEKVTSM------------QPPAID 132
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ + I++L G SRI + L K + ++ISG P
Sbjct: 133 EPADAIIVLTGG------------------QSRIQAAVNLLKDKRGK----RLLISGVHP 170
Query: 124 QKHG--LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSS 181
+ L + + L + V+ D +L+T NA S I+ + +ILV++
Sbjct: 171 STNEKVLQRATHADQSLFDCCVDLDR-----SALNTIGNAAESERWIRTNNYRRVILVTN 225
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNA 209
YH+ RS L + + + +N
Sbjct: 226 NYHIPRSTLEMSYLMKDVEFVPYPVVNG 253
>gi|21673972|ref|NP_662037.1| hypothetical protein CT1146 [Chlorobium tepidum TLS]
gi|21647116|gb|AAM72379.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 196
Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 61/160 (38%), Gaps = 27/160 (16%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
LLF I + ++ +L + + + +IIV+LG
Sbjct: 7 ISLLFFLISSALCASL---YLGLGFLV-SMHSTKPEKADIIVILGG-------------- 48
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIIS-GGDPQKHGLAESIVYNNKLLESGVERDD 147
R+ + LYK+ + T I S P E KL+ GV R
Sbjct: 49 ---DDGLRVSKGGDLYKAGYAKHVLLTGIDSRYYRPNHPNWRE-----RKLMARGVPRKH 100
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
I ++T S +++ A+ +S ++ K+ ++VS H+ R
Sbjct: 101 IIVDTWSETSWEEAENTSDLMDKNGWKSALVVSDPPHMLR 140
>gi|17158752|ref|NP_478263.1| hypothetical protein all7616 [Nostoc sp. PCC 7120]
gi|17134701|dbj|BAB77259.1| all7616 [Nostoc sp. PCC 7120]
Length = 228
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 64/199 (32%), Gaps = 23/199 (11%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFS-FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
I + L + +R I +L I I L Y +P P+ +
Sbjct: 7 SIGGKYFKLFRYLRWILLGLVISVLAKPLIATAYIG---LMTNGDRYVQPESVPKEQVA- 62
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++ G G P+ R+ ++LYK K + T GD
Sbjct: 63 ---IVFGAGILPNDN-------PTPMLSDRVEAAVKLYKMGKISKLLMT-----GDNSTV 107
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E + GV +I L+ T+++ + + ++++ YHL
Sbjct: 108 SYNEVRSMLKYAHDLGVPMKNITLDYAGFSTYESCYRAHKV---FGVHKAVVITQNYHLP 164
Query: 187 RSQLYFQHFGINTKASCSD 205
R+ + G+ T +
Sbjct: 165 RTVYTCRQLGLKTVGLGTP 183
>gi|269793790|ref|YP_003313245.1| hypothetical protein Sked_04460 [Sanguibacter keddieii DSM 10542]
gi|269095975|gb|ACZ20411.1| uncharacterized membrane protein [Sanguibacter keddieii DSM 10542]
Length = 216
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 15/133 (11%)
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG T PS +R+ + LY + + GD + E
Sbjct: 45 VLGARVYDDGT-------PSQFLRARLDLAVELYGAGSVEVLLVP-----GDGRPDHNDE 92
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L+E GV + I ++ DT+ + K + +V+ ++HL R+
Sbjct: 93 PAAMRRYLVEQGVPAEAIIQDSAGFDTYDS---CVRADKVYGVGALTVVTQSFHLARAVT 149
Query: 191 YFQHFGINTKASC 203
+ G++
Sbjct: 150 TCRAVGVDAVGVG 162
>gi|312200487|ref|YP_004020548.1| hypothetical protein FraEuI1c_6708 [Frankia sp. EuI1c]
gi|311231823|gb|ADP84678.1| protein of unknown function DUF218 [Frankia sp. EuI1c]
Length = 219
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 70/204 (34%), Gaps = 22/204 (10%)
Query: 27 SCFMLLFSFIGWGIIPTIL-----LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ + F+ +G ++ + + P +IV+LG T
Sbjct: 3 VAWWVAFAAVGMVVLAACAVELTHWTASRRHFPDPPAKTGADDQTEVIVVLGCPTRHNGN 62
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL-E 140
+ A + R +R ++ ++ +G +AE+
Sbjct: 63 VSANQQW-------RTKIAVR----SRRRRTDSLLVFTGAATLGAAVAEADTMAGYARSA 111
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GIN 198
GV + I E S T +N FS+ ++ I S+ H R++ Y + +
Sbjct: 112 LGVAEELIVSEASSRSTRENLAFSTPQLEQATVIRIA--SNPLHAARARRYLRQSRPDLF 169
Query: 199 TKASCS-DYLNAYYSIIPLSANFY 221
+ + + DY + + L++ FY
Sbjct: 170 ARLARTRDYRPFEHPWLKLNSAFY 193
>gi|167760638|ref|ZP_02432765.1| hypothetical protein CLOSCI_03020 [Clostridium scindens ATCC 35704]
gi|167661763|gb|EDS05893.1| hypothetical protein CLOSCI_03020 [Clostridium scindens ATCC 35704]
Length = 70
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+SGG + ES ++ GV+ D I E +S+ T +N FS + + K
Sbjct: 1 MSGGQGSGEDIPESEAMAAYEVDKGVDADRIIKEQKSVSTKENLLFSRKLTEKKALK 57
>gi|302838718|ref|XP_002950917.1| hypothetical protein VOLCADRAFT_104906 [Volvox carteri f.
nagariensis]
gi|300264034|gb|EFJ48232.1| hypothetical protein VOLCADRAFT_104906 [Volvox carteri f.
nagariensis]
Length = 242
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 51/142 (35%), Gaps = 20/142 (14%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + + I++L G T +IP R+ + L C I+ G
Sbjct: 74 EPYRSLDAIIVLAGGQTGPDSIPKWVER-------RLDTALSL---QSLQQKACPILSLG 123
Query: 121 GDPQKHGLA---------ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKN 170
G E+ + L G + D + E S DT NA FS ++
Sbjct: 124 GGTPHKAPYLDSGGFVIHEATACSRYLTRRGADADLLLKEVSSYDTVGNAYFSLTIHAVP 183
Query: 171 MQGKNIILVSSAYHLKRSQLYF 192
+ + +V+S +H+ R+ F
Sbjct: 184 AGWRRVGVVTSDFHMPRTAALF 205
>gi|296115269|ref|ZP_06833909.1| hypothetical protein GXY_05798 [Gluconacetobacter hansenii ATCC
23769]
gi|295978172|gb|EFG84910.1| hypothetical protein GXY_05798 [Gluconacetobacter hansenii ATCC
23769]
Length = 175
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 8/164 (4%)
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G + I R+ P + + S + + +I +GG P+ +E+
Sbjct: 2 GAGRRLPIVIFGARVRPDGTPSRTLRLRVEAAASFARDCENPLLIPTGG-PRDGLPSEAR 60
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK-NIILVSSAYHLKRSQLY 191
V L E GV DI E + DT + S +++ + + + SSAYHL R +
Sbjct: 61 VMAGLLRELGVADGDIMPEETARDTLDSVLACSRLLRAIGHDGPVAVASSAYHLPRCMVL 120
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
A S+ F+ L+E +
Sbjct: 121 MALARWRVVRVPPPRHPAARSV--SRRWFWR----LREGAALPW 158
>gi|218248566|ref|YP_002373937.1| hypothetical protein PCC8801_3831 [Cyanothece sp. PCC 8801]
gi|218169044|gb|ACK67781.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8801]
Length = 232
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 59/171 (34%), Gaps = 40/171 (23%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K + I++LG S +R +L + IIIS G
Sbjct: 50 KPVDGILVLGG------------------SVTREIYAAQLRHQLPE----IPIIISQG-- 85
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+E + LE + TF+N FS +++ ++ + L++S
Sbjct: 86 -----SEDPCIFLIFQRYQAPLQRVWLENCANSTFENFFFSVPLLRRLRVHKVKLITSDS 140
Query: 184 HLKRSQLYFQ-HFGINTKA----------SCSDYLNAYYSIIPLSANFYLT 223
HL R++ Q H G+ A + + +++ ++ + +
Sbjct: 141 HLPRAKWMAQIHLGVQGIALQVVTVPEIGIPGNQESPLKTLLDVTRSLIWS 191
>gi|157963152|ref|YP_001503186.1| hypothetical protein Spea_3336 [Shewanella pealeana ATCC 700345]
gi|157848152|gb|ABV88651.1| protein of unknown function DUF218 [Shewanella pealeana ATCC
700345]
Length = 165
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 54/130 (41%), Gaps = 14/130 (10%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK-- 125
+I++LG+ + S + SR + Y+ ++++GG +
Sbjct: 4 VILVLGS-------PNDNQGRLSDIAISRCQAALWQYQ----LRPDSKVLLTGGFGEHFN 52
Query: 126 -HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
A ++ L++ G+ S TF++A S +++ + + LV+S +H
Sbjct: 53 QTNTAHALYCQAYLIDHGMPNSAFTDIALSRFTFEDAILSKPIVEEHGFRELCLVTSEFH 112
Query: 185 LKRSQLYFQH 194
L R++L F
Sbjct: 113 LPRARLIFSQ 122
>gi|294672924|ref|YP_003573540.1| hypothetical protein PRU_0141 [Prevotella ruminicola 23]
gi|294472636|gb|ADE82025.1| conserved domain protein [Prevotella ruminicola 23]
Length = 447
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 19/164 (11%)
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
LLG P RI F +Y RI +LYK+ K I+ISG + G+ E
Sbjct: 38 LLG----TTPQARITRISNQFFTY-RIDAAEQLYKAGKIEQ----ILISGDENSLDGVNE 88
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ L+ GV I L+ + T + ++ + K+ ++S +H +R+
Sbjct: 89 PECMRDSLVARGVPSSAIILDGKGYRTINSIVDANKV---FGLKSFTIISQEFHNERAIY 145
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+H G++ + + AY + +P + +LT ++EY +
Sbjct: 146 QAEHLGLDVE-----NIQAYNAEMPKARRAFLTT--IREYFARV 182
>gi|300772477|ref|ZP_07082347.1| LexA repressor [Sphingobacterium spiritivorum ATCC 33861]
gi|300760780|gb|EFK57606.1| LexA repressor [Sphingobacterium spiritivorum ATCC 33861]
Length = 112
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ G+ I S +T ++ + S + + +++++S +H++R+ + ++
Sbjct: 11 RKYLVNKGIPDTAILDGPLSTNTVEDFKLSKELTSQLNPDILVVITSDFHMQRAGILYRR 70
Query: 195 F--GINTKASCSDYLNAYYSIIPLSANFYLTELALKE 229
F G + + +IPL + L E
Sbjct: 71 FTDGSKVLFMPAPSSLSEEELIPLIEHETRAVKKLHE 107
>gi|323494660|ref|ZP_08099763.1| hypothetical protein VIBR0546_02935 [Vibrio brasiliensis LMG 20546]
gi|323311093|gb|EGA64254.1| hypothetical protein VIBR0546_02935 [Vibrio brasiliensis LMG 20546]
Length = 277
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 18/128 (14%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+L G ++ + + SR+ + L +I GG Q +
Sbjct: 6 VVLILGKRLVDNVITA------EGRSRVDALINLINDKDLAPEA--VIFCGGITQGQTES 57
Query: 130 ESIVYNNKL--LESGVER--DDIKLETQSLDTFQNAQFSS------SMIKNMQGKNIILV 179
E+ + + + LE +S +T +N + ++ + + Q ++L+
Sbjct: 58 EARAMYRYFNSRSAQISPFLPHVLLEDKSTNTIENIRNAAEKLIESELCRKEQRVKVVLI 117
Query: 180 SSAYHLKR 187
S+ YHLKR
Sbjct: 118 SNDYHLKR 125
>gi|110635418|ref|YP_675626.1| hypothetical protein Meso_3089 [Mesorhizobium sp. BNC1]
gi|110286402|gb|ABG64461.1| protein of unknown function DUF218 [Chelativorans sp. BNC1]
Length = 218
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/223 (21%), Positives = 79/223 (35%), Gaps = 38/223 (17%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+R + G+GI +++ L +P + IV+L G
Sbjct: 11 VRSAAATIFLFFVLYVAGFGIFADHVVR---------LRAPAELNPADGIVVLTGG---- 57
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAESIVYNNK 137
SRI M L K+ K ++ISG +P + L + +
Sbjct: 58 --------------QSRIDTGMDLLKAGKAK----RLLISGVNPVARVDDLRLATGGDRA 99
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L V+ D +L+T NAQ S+ + +II+V++ YH+ RS L +
Sbjct: 100 LFNCCVDIDR-----AALNTVGNAQESAKWVSANTYGSIIVVTNNYHMPRSLLEMRRILP 154
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
N +N +N + L EY + A RG
Sbjct: 155 NADLQPYPVVNTPLDDGAWISNPDALRVLLIEYTKYIAALARG 197
>gi|257061632|ref|YP_003139520.1| hypothetical protein Cyan8802_3881 [Cyanothece sp. PCC 8802]
gi|256591798|gb|ACV02685.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8802]
Length = 232
Score = 66.0 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 59/171 (34%), Gaps = 40/171 (23%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
K + I++LG S +R +L + IIIS G
Sbjct: 50 KPVDGILVLGG------------------SVTREIYAAQLRHQLPE----IPIIISQG-- 85
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+E + LE + TF+N FS +++ ++ + L++S
Sbjct: 86 -----SEDPCILLIFQRYQAPLQRVWLENCANSTFENFFFSVPLLRRLRVHKVKLITSDS 140
Query: 184 HLKRSQLYFQ-HFGINTKA----------SCSDYLNAYYSIIPLSANFYLT 223
HL R++ Q H G+ A + + +++ ++ + +
Sbjct: 141 HLPRAKWMAQIHLGVQGIALQVVTVPEIGIPGNQESPLKTLLDVTRSLIWS 191
>gi|78189450|ref|YP_379788.1| hypothetical protein Cag_1489 [Chlorobium chlorochromatii CaD3]
gi|78171649|gb|ABB28745.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
Length = 235
Score = 66.0 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 60/154 (38%), Gaps = 30/154 (19%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
+ LL L P PQ ++IV+LG
Sbjct: 41 GIAAMSFVSIGLLLSL------PASKPQ---KADVIVVLGG-----------------DK 74
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
R+ + LY ++++G D + + + ++ + GV++ I ++T+
Sbjct: 75 GLRVQKGAELYND----GFSKKVLLTGIDRRYYRPSRPNWRERRIRDLGVKKSAIVVDTK 130
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
S +++ A +++ ++ + ++ I+VS H+ R
Sbjct: 131 SQTSWEEAMNTAATMERRKWESAIVVSDPPHMLR 164
>gi|323493247|ref|ZP_08098376.1| hypothetical protein VIBR0546_19584 [Vibrio brasiliensis LMG 20546]
gi|323312513|gb|EGA65648.1| hypothetical protein VIBR0546_19584 [Vibrio brasiliensis LMG 20546]
Length = 211
Score = 66.0 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 11/107 (10%)
Query: 96 RIFE-TMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKL 150
R+ E +LY + +I SGG + +E+ + + + GV+ DI +
Sbjct: 38 RVAEHAAKLYLEGWAN----KVIFSGGVGRLTEGMFSGSEAQAFADHAHDLGVQIADIII 93
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHF 195
E ++ ++ +N F+ +++ + ILV Y +R+ F
Sbjct: 94 EDKATNSGENVVFTHQLLRRSGLDFHSFILVQKPYMERRAYATFVKQ 140
>gi|227874501|ref|ZP_03992673.1| conserved hypothetical protein [Oribacterium sinus F0268]
gi|227839645|gb|EEJ50103.1| conserved hypothetical protein [Oribacterium sinus F0268]
Length = 329
Score = 66.0 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 21/166 (12%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK--IFFMSCFMLLFSFIGWGIIPTILLKHL-QFSYQRPL 57
+LL I L++++ + + +RK +FF L S+ + ++ + L+ +L Q+ Y
Sbjct: 33 LLLGAIHLLMAFVYKAPERLRKNPLFFRFRIFGLSSYCIFFLLFSYLIGYLSQYHYG--- 89
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
QWK + I+++G+ P ++ +R+ Y+ + TI+
Sbjct: 90 ---QWKDPLSYILVVGSELENNKITPLLQ--------NRLERADLCYQE----NPSATIV 134
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
+SGG + AE+ V +L+ G+ D + +E S T Q +
Sbjct: 135 LSGGKGRNSASAEASVMYQSMLKMGIPADAMLMEFYSKTTEQKLSY 180
>gi|239980668|ref|ZP_04703192.1| hypothetical protein SalbJ_14585 [Streptomyces albus J1074]
gi|291452528|ref|ZP_06591918.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291355477|gb|EFE82379.1| conserved hypothetical protein [Streptomyces albus J1074]
Length = 225
Score = 66.0 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 12/137 (8%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAE 130
G + P AI + T LY++ + ++ +GG+ E
Sbjct: 29 GHELRPADVAIGL--GSHDLGVATRTAELYRA----GLFSLLVFTGGNSPTTAARFPRGE 82
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRS 188
++ Y L GV + I LE+++ +T N +S ++ +++LVS Y +R+
Sbjct: 83 AVHYREHALGLGVPEEAILLESRAGNTGHNITYSRKVLAEAGVSPASVLLVSKPYMERRA 142
Query: 189 QLYFQHFGINTKASCSD 205
+ C+
Sbjct: 143 YATARKLWPEVVVRCTS 159
>gi|319791650|ref|YP_004153290.1| hypothetical protein Varpa_0961 [Variovorax paradoxus EPS]
gi|315594113|gb|ADU35179.1| protein of unknown function DUF218 [Variovorax paradoxus EPS]
Length = 211
Score = 66.0 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 67/178 (37%), Gaps = 15/178 (8%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
LL ++ + ++LG+ + P+ R+ + L ++ + +
Sbjct: 40 LLDNPPQRPADAALILGS-------RAYLDGRPNPCLTGRVDTGIALAQAGRVKQ----L 88
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+ +GG ++ G E+ V G + E S T N S +++ +++
Sbjct: 89 VFTGGVDKEDGRIEADVMQQHAQGLGF-AGPMLQEPASTSTRLNLSLSRPLLQAAGVRSV 147
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
++VS YHL R + + G + + Y A S + AL+E I+
Sbjct: 148 VIVSEPYHLWRVERLVRMSGFD-QTFDVQYAAAPTSCWRRWGMLFKG--ALREPAAII 202
>gi|329113437|ref|ZP_08242218.1| Hypothetical protein APO_0206 [Acetobacter pomorum DM001]
gi|326697262|gb|EGE48922.1| Hypothetical protein APO_0206 [Acetobacter pomorum DM001]
Length = 171
Score = 65.6 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 57/150 (38%), Gaps = 13/150 (8%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS +R+ + + I +GG PQ +G E+ V LL++G+ I
Sbjct: 19 PSVALLNRVHSALMFGAAHGPVMY----IPTGGVPQ-NGQTEADVMAACLLKAGIAPKCI 73
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E + DTF +A + +++ + I +VSS HL R L + G +
Sbjct: 74 LPEPTAGDTFDSAVACTHLLRRAGYLTAQPIAVVSSPLHLPRCVLLMRLAGWKVQPVP-- 131
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILI 235
+L A + + E + +
Sbjct: 132 FLRAQPHVPNMRKKLL---RIAHECLALPW 158
>gi|205354136|ref|YP_002227937.1| hypothetical protein SG3118 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205273917|emb|CAR38919.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326629256|gb|EGE35599.1| hypothetical protein SG9_3160 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 230
Score = 65.6 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 67/198 (33%), Gaps = 23/198 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ ++CF+L+ + + L+ + + ++ ++LG
Sbjct: 16 RRALTVACFLLVAAGVA-LFYSNWLIVNASQHLTWNDIQTVPARNVG--LVLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K E L+
Sbjct: 67 -KPGNRY-----FTRRINTAAALYHAGKVKW----LLVSGDNGKKE-YDEPSAMQQALIA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + + + I ++S A+H +R+ Q +GI+
Sbjct: 116 KGVPEAAIFCDYAGFSTLDSVVRARKVFGE---SRITIISQAFHNQRAIWLAQQYGIDAI 172
Query: 201 ASCSDYLNAYYSIIPLSA 218
+ LN +
Sbjct: 173 GVNAPDLNKRHGTYTRPR 190
>gi|28900110|ref|NP_799765.1| hypothetical protein VPA0255 [Vibrio parahaemolyticus RIMD 2210633]
gi|260365761|ref|ZP_05778257.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|260880683|ref|ZP_05893038.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|260897711|ref|ZP_05906207.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
gi|260899378|ref|ZP_05907773.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
gi|28808393|dbj|BAC61598.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308086272|gb|EFO35967.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
gi|308091731|gb|EFO41426.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|308109267|gb|EFO46807.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
gi|308115009|gb|EFO52549.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
Length = 280
Score = 65.6 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 53/136 (38%), Gaps = 24/136 (17%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
GN++++LG + + S + SR+ + + ++ GG Q
Sbjct: 4 GNVVIVLG--------KRLVNNQLSAEGISRVEALAAKIREMPMENTA--LVFCGGKTQG 53
Query: 126 HGLAESIVYNNKL------LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN---- 175
++E+ L LE +SL+TF+N + ++ ++
Sbjct: 54 QSISEADAMYAYFQTLNTSLAKPFPTSQTLLENRSLNTFENMRNAAKVLCESGLFPLPSQ 113
Query: 176 ----IILVSSAYHLKR 187
+IL+S+ YHL+R
Sbjct: 114 ATVEVILLSNVYHLER 129
>gi|170740433|ref|YP_001769088.1| hypothetical protein M446_2193 [Methylobacterium sp. 4-46]
gi|168194707|gb|ACA16654.1| protein of unknown function DUF218 [Methylobacterium sp. 4-46]
Length = 245
Score = 65.6 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 63/192 (32%), Gaps = 46/192 (23%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + IV+L G RI + + L + ++I+G
Sbjct: 60 QPYARADGIVVLTGG------------------AQRIGDAIDLLAA----GFGRRLLITG 97
Query: 121 GDPQKHGLAESIVYN-----NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+ + L+ V+ L+ ++ +T NA + ++ +
Sbjct: 98 ---VNERTSRDEIARLNPGQQHLISCCVD-----LDYRARNTIGNAIETRRWMRENGFRT 149
Query: 176 IILVSSAYHLKRSQLYFQHF---GINTKASCS---DYLNAYYSIIPLSANFYLTELALKE 229
I +V+S YH+ R+ L H G + + P SA + E
Sbjct: 150 IAVVTSNYHMPRTLLELDHALTSGDRVVPHPVVHEGFDADAWWHHPASARLLAS-----E 204
Query: 230 YIGILIAYYRGN 241
Y+ L+A+ R
Sbjct: 205 YVKFLVAWLRTR 216
>gi|281354944|ref|ZP_06241438.1| protein of unknown function DUF218 [Victivallis vadensis ATCC
BAA-548]
gi|281317824|gb|EFB01844.1| protein of unknown function DUF218 [Victivallis vadensis ATCC
BAA-548]
Length = 225
Score = 65.6 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 18/186 (9%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
RK ++ L + + + + + R +P+ ++ ++LG
Sbjct: 11 KFRKRLMIAAGFCLIAGVLFLWGADRAVA---AARGRIFSAPELIPPRDVALVLG----- 62
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
T + P+ R+ RLY + K +I+SG D ++ E L
Sbjct: 63 --TSKQAKYGPNLYFRYRMDAAARLYHAGKVR----KLIVSG-DNRRRDYNEPEDMRAAL 115
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+E GV +DI + L T + + + I +VS H +R+ ++ GI+
Sbjct: 116 IERGVAPEDIYADYAGLRTLDSVIRAKKI---FGQTRITVVSQKDHCERALYIARNHGID 172
Query: 199 TKASCS 204
+
Sbjct: 173 AVGFAA 178
>gi|86142614|ref|ZP_01061053.1| hypothetical protein MED217_06861 [Leeuwenhoekiella blandensis
MED217]
gi|85830646|gb|EAQ49104.1| hypothetical protein MED217_06861 [Leeuwenhoekiella blandensis
MED217]
Length = 220
Score = 65.6 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 15/137 (10%)
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG + S R+ + LY K ++SG D + E
Sbjct: 56 VLGASVRRNGEL-------STMLRDRVESALLLYNKGKIK----RFLVSG-DNRTTNYNE 103
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ LLE GV +DI ++ DT+ + +S + + + I+VS +HL R+
Sbjct: 104 PVAMKKYLLERGVPEEDIFMDFAGFDTYDSVYRASYIFE---VDSAIVVSQRFHLPRAVY 160
Query: 191 YFQHFGINTKASCSDYL 207
+ G+N D
Sbjct: 161 IARSMGLNFYGYNGDRR 177
>gi|16766521|ref|NP_462136.1| integral membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161616217|ref|YP_001590182.1| hypothetical protein SPAB_04021 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|16421779|gb|AAL22095.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|161365581|gb|ABX69349.1| hypothetical protein SPAB_04021 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|261248389|emb|CBG26226.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995419|gb|ACY90304.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159774|emb|CBW19293.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914249|dbj|BAJ38223.1| hypothetical protein STMDT12_C32800 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|323131582|gb|ADX19012.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|332990087|gb|AEF09070.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 230
Score = 65.6 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 67/192 (34%), Gaps = 23/192 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ ++CF+L+ + + L+ + + ++ ++LG
Sbjct: 16 RRALTVACFLLVAAGVA-LFYSNWLIVNASQHLTWNDIQTVPARNVG--LVLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K E L+
Sbjct: 67 -KPGNRY-----FTRRINTAAALYHAGKVKW----LLVSGDNGKKE-YDEPSAMQQALMA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + + + I ++S A+H +R+ Q +GI+
Sbjct: 116 KGVPEAAIFCDYAGFSTLDSVVRARKVFGE---SRITIISQAFHNQRAIWLAQQYGIDAI 172
Query: 201 ASCSDYLNAYYS 212
+ LN +
Sbjct: 173 GVNAPDLNKRHG 184
>gi|300779632|ref|ZP_07089488.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
gi|300533742|gb|EFK54801.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
Length = 161
Score = 65.6 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 54/136 (39%), Gaps = 21/136 (15%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG II P+ + +R +++SG
Sbjct: 11 VVLGA--RIIDGRPSRM----------LEARLRTATEYVASHGRRPVVVSGHG------- 51
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E+ V L ++GV+ DI E + T +N + S ++ + + +I+V++ +H+ R +
Sbjct: 52 EAAVMAAWLADNGVDARDIIEEPFATSTNENLEQSWALFPDA--RRLIVVTNGFHVARVR 109
Query: 190 LYFQHFGINTKASCSD 205
++ H + +
Sbjct: 110 VWAAHLEVPVTVVAAP 125
>gi|227550000|ref|ZP_03980049.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
44291]
gi|227077909|gb|EEI15872.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
44291]
Length = 159
Score = 65.3 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 63/164 (38%), Gaps = 27/164 (16%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG I PS +R+ + L++ +++SG
Sbjct: 5 IVVLGA--------RVIDGRPSPMLEARLSTALCLWRKDPSR----PVVVSGHHG----- 47
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ V + L GV E + T +N + ++ G + +V+S++H+ R+
Sbjct: 48 -EASVMASWLAAHGVLAA--VEEPAARSTNENLENCHAL---FPGTTLTVVTSSFHVLRT 101
Query: 189 QLYFQHFGI--NTKASCSDYLNAYYSIIPLSANFYLT--ELALK 228
+L+ H GI A+ + + + + + +A +
Sbjct: 102 KLWAWHLGIPVEVVAAPTPPRSRVKNYVREIVALPHSAARVAWR 145
>gi|291522028|emb|CBK80321.1| Uncharacterized conserved protein [Coprococcus catus GD/7]
Length = 195
Score = 65.3 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 39/151 (25%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K +II++ GN +P+ LY++ M I++SG
Sbjct: 15 DLPKKADIIIVPGN----------TWPQPAR-------RAAALYQA----GMAPYIVVSG 53
Query: 121 ----GDPQKHGLA------------ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
G G + E+ + L+++GV + I E ++ T +NA++
Sbjct: 54 RYSKGRSAFEGPSCDRECYKGPYAAEADFLTDVLMQAGVPGEAILQEREATFTLENAEYI 113
Query: 165 SSMIKN--MQGKNIILVSSAYHLKRSQLYFQ 193
M++ + K I+ A+H +R ++YF+
Sbjct: 114 RKMLEEKHLPIKRAIICCQAFHARRCRMYFE 144
>gi|160881431|ref|YP_001560399.1| hypothetical protein Cphy_3306 [Clostridium phytofermentans ISDg]
gi|160430097|gb|ABX43660.1| protein of unknown function DUF218 [Clostridium phytofermentans
ISDg]
Length = 189
Score = 65.3 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 111 SMHCTIIISGGDPQKHG--LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
M I+ SGG +K E+ ++ G+ D I E ++ +T++NA FS ++
Sbjct: 45 GMAKYILPSGGKNKKLPDYPNEADFLKTIAIKRGISSDIIICENKATNTYENALFSYELL 104
Query: 169 --KNMQGKNIILVSSAYHLKRSQLYFQH 194
K + +ILV AYH +R+ +Q
Sbjct: 105 MGKCIDITKVILVCKAYHSRRALFSYQK 132
>gi|198242619|ref|YP_002217203.1| SanA protein [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|197937135|gb|ACH74468.1| SanA protein [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
Length = 230
Score = 65.3 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 68/192 (35%), Gaps = 23/192 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ ++CF+L+ + + L+ + + ++ ++LG
Sbjct: 16 RRALTVACFLLVAAGVA-LFYSNWLIVNASQHLTWNDIQTVPARNVG--LVLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K E L+
Sbjct: 67 -KPGNRY-----FTRRINTAAALYHAGKVKW----LLVSGDNGKKE-YDEPSAMQQALIA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + + + + I ++S A+H +R+ Q +GI+
Sbjct: 116 KGVPEAAIFCDYAGFSTLDSVVRARKVFGE---RRITIISQAFHNQRAIWLAQQYGIDAI 172
Query: 201 ASCSDYLNAYYS 212
+ LN +
Sbjct: 173 GVNAPDLNKRHG 184
>gi|322613625|gb|EFY10566.1| hypothetical protein SEEM315_07855 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322621218|gb|EFY18076.1| hypothetical protein SEEM971_20584 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624281|gb|EFY21115.1| hypothetical protein SEEM973_20700 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322627981|gb|EFY24770.1| hypothetical protein SEEM974_20590 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633099|gb|EFY29841.1| hypothetical protein SEEM201_11685 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636324|gb|EFY33032.1| hypothetical protein SEEM202_14388 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643499|gb|EFY40061.1| hypothetical protein SEEM954_04770 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647610|gb|EFY44098.1| hypothetical protein SEEM054_00615 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648592|gb|EFY45039.1| hypothetical protein SEEM675_03746 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653644|gb|EFY49970.1| hypothetical protein SEEM965_21391 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657752|gb|EFY54020.1| hypothetical protein SEEM19N_17516 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663853|gb|EFY60052.1| hypothetical protein SEEM801_03806 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669136|gb|EFY65287.1| hypothetical protein SEEM507_10771 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322672871|gb|EFY68978.1| hypothetical protein SEEM877_00015 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678139|gb|EFY74202.1| hypothetical protein SEEM867_02802 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681315|gb|EFY77348.1| hypothetical protein SEEM180_21294 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322687755|gb|EFY83722.1| hypothetical protein SEEM600_15091 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195567|gb|EFZ80744.1| hypothetical protein SEEM581_10355 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199752|gb|EFZ84842.1| hypothetical protein SEEM501_16935 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202500|gb|EFZ87540.1| hypothetical protein SEEM460_17505 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323208012|gb|EFZ92958.1| hypothetical protein SEEM020_19130 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323212436|gb|EFZ97253.1| hypothetical protein SEEM6152_09408 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215082|gb|EFZ99830.1| hypothetical protein SEEM0077_03989 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222812|gb|EGA07177.1| hypothetical protein SEEM0047_10245 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224107|gb|EGA08400.1| hypothetical protein SEEM0055_22220 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230431|gb|EGA14549.1| hypothetical protein SEEM0052_19224 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323235217|gb|EGA19303.1| hypothetical protein SEEM3312_06763 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239258|gb|EGA23308.1| hypothetical protein SEEM5258_06650 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244384|gb|EGA28390.1| hypothetical protein SEEM1156_00557 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323247001|gb|EGA30967.1| hypothetical protein SEEM9199_20625 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323254066|gb|EGA37886.1| hypothetical protein SEEM8282_00135 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323256177|gb|EGA39913.1| hypothetical protein SEEM8283_11271 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262647|gb|EGA46203.1| hypothetical protein SEEM8284_02776 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323267257|gb|EGA50741.1| hypothetical protein SEEM8285_20762 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269341|gb|EGA52796.1| hypothetical protein SEEM8287_11652 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 230
Score = 65.3 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 67/192 (34%), Gaps = 23/192 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ ++CF+L+ + + L+ + + ++ ++LG
Sbjct: 16 RRALTVACFLLVAAGVA-LFYSNWLIVNASQHLTWNDIQTVPARNVG--LVLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K E L+
Sbjct: 67 -KPGNRY-----FTRRINTAAALYHAGKVKW----LLVSGDNGKKE-YDEPSAMQQALIA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + + + I ++S A+H +R+ Q +GI+
Sbjct: 116 KGVPEAAIFCDYAGFSTLDSVVRARKVFGE---SRITIISQAFHNQRAIWLAQQYGIDAI 172
Query: 201 ASCSDYLNAYYS 212
+ LN +
Sbjct: 173 GVNAPDLNKRHG 184
>gi|313679730|ref|YP_004057469.1| hypothetical protein Ocepr_0839 [Oceanithermus profundus DSM 14977]
gi|313152445|gb|ADR36296.1| protein of unknown function DUF218 [Oceanithermus profundus DSM
14977]
Length = 172
Score = 65.3 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS +R+ + LY+S + I++SGG +E L GV +
Sbjct: 39 PSPVFRARLDAALELYRSGR----AARIVVSGGRAPGDRFSEGASGCRYLEARGVPAAAL 94
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
ET+S T++N + +++ + +V+ H
Sbjct: 95 ACETESHSTWENLVRARPLLE---PGPVWIVTDEPH 127
>gi|16761994|ref|NP_457611.1| hypothetical protein STY3402 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29143481|ref|NP_806823.1| hypothetical protein t3142 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|167553271|ref|ZP_02347021.1| SanA protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|168243055|ref|ZP_02667987.1| SanA protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194442486|ref|YP_002042489.1| SanA protein [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194450555|ref|YP_002047259.1| hypothetical protein SeHA_C3517 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|213053187|ref|ZP_03346065.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213427203|ref|ZP_03359953.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
gi|213583081|ref|ZP_03364907.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
gi|213621929|ref|ZP_03374712.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. E98-2068]
gi|213646097|ref|ZP_03376150.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
gi|238910024|ref|ZP_04653861.1| SanA protein [Salmonella enterica subsp. enterica serovar Tennessee
str. CDC07-0191]
gi|25306413|pir||AD0894 conserved hypothetical protein STY3402 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16504297|emb|CAD07746.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139115|gb|AAO70683.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|194401149|gb|ACF61371.1| SanA protein [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194408859|gb|ACF69078.1| SanA protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|205322260|gb|EDZ10099.1| SanA protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205337915|gb|EDZ24679.1| SanA protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|320087676|emb|CBY97440.1| Uncharacterized protein ygjQ [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|326624979|gb|EGE31324.1| SanA protein [Salmonella enterica subsp. enterica serovar Dublin
str. 3246]
Length = 230
Score = 65.3 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 67/192 (34%), Gaps = 23/192 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ ++CF+L+ + + L+ + + ++ ++LG
Sbjct: 16 RRALTVACFLLVAAGVA-LFYSNWLIVNASQHLTWNDIQTVPARNVG--LVLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K E L+
Sbjct: 67 -KPGNRY-----FTRRINTAAALYHAGKVKW----LLVSGDNGKKE-YDEPSAMQQALIA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + + + I ++S A+H +R+ Q +GI+
Sbjct: 116 KGVPEAAIFCDYAGFSTLDSVVRARKVFGE---SRITIISQAFHNQRAIWLAQQYGIDAI 172
Query: 201 ASCSDYLNAYYS 212
+ LN +
Sbjct: 173 GVNAPDLNKRHG 184
>gi|260777426|ref|ZP_05886320.1| hypothetical protein VIC_002820 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607092|gb|EEX33366.1| hypothetical protein VIC_002820 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 283
Score = 65.3 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 18/129 (13%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
N++++LG + + + SR+ +L S + ++ GG
Sbjct: 5 NVVIVLG--------KRLVGNALTAEGKSRVEALPKLLSSYDLNETA--LLFCGGVTPGQ 54
Query: 127 GLAESIVYNNKLLES----GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK----NIIL 178
+E++ + + +I LE+ S +T QN ++ +K + + ++ L
Sbjct: 55 TTSEAMAMRDYFKQLPSAKMFHDLNIILESDSQNTVQNIHNAALKLKQLGIEDQRVDVTL 114
Query: 179 VSSAYHLKR 187
VS+ YHLKR
Sbjct: 115 VSNDYHLKR 123
>gi|213961780|ref|ZP_03390046.1| SanA protein [Capnocytophaga sputigena Capno]
gi|213955569|gb|EEB66885.1| SanA protein [Capnocytophaga sputigena Capno]
Length = 216
Score = 65.3 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 54/145 (37%), Gaps = 18/145 (12%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
P+ RI + LYK+ K I++SG + + + E L+ +G+ + I
Sbjct: 73 PNKYFLYRIDAAVALYKAGKIEY----ILVSGDNHR-NDYNEPEEMKRALMNNGIPEERI 127
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
L+ T + + + I++S +H +R+ +H I + +
Sbjct: 128 ILDYAGFRTLDSVVRAKEV---FGYDTFIVISQRFHNERALFLAKHHDIQAIGFDAQDVT 184
Query: 209 AYYSIIPLSANFYLTELALKEYIGI 233
AYY ++EY+
Sbjct: 185 AYYGFKTR----------VREYLAR 199
>gi|269964085|ref|ZP_06178389.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831181|gb|EEZ85336.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 278
Score = 65.3 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 53/132 (40%), Gaps = 22/132 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
++++LG + + S + SR+ + + + ++ GG Q
Sbjct: 6 VVIILG--------KRLVHDQLSAEGRSRVEALLNVLNEFCFETTA--LVFCGGVTQGQT 55
Query: 128 LAESIVYNNKL------LESGVERDDIKLETQSLDTFQNAQFSS------SMIKNMQGKN 175
++E+ E + +E +SL+T QN Q ++ ++ + Q
Sbjct: 56 VSEADAMYRYFCQLAKAREIDFPEQQVIIENRSLNTVQNMQNAAAELLGSALCEAGQTIK 115
Query: 176 IILVSSAYHLKR 187
+ L+S+ YHL+R
Sbjct: 116 VTLLSNDYHLER 127
>gi|194471333|ref|ZP_03077317.1| SanA protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|197248296|ref|YP_002148153.1| SanA protein [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|194457697|gb|EDX46536.1| SanA protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|197211999|gb|ACH49396.1| SanA protein [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
Length = 230
Score = 65.3 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 67/192 (34%), Gaps = 23/192 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ ++CF+L+ + + L+ + + ++ ++LG
Sbjct: 16 RRALTVACFLLVAAGVA-LFYSNWLIVNASQHLTWNDIQTVPARNVG--LVLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K E L+
Sbjct: 67 -KPGNRY-----FTRRINTAAALYHAGKVKW----LLVSGDNGKKE-YDEPSAMQQALIA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + + + I ++S A+H +R+ Q +GI+
Sbjct: 116 KGVPEAAIFCDYAGFSTLDSVVRARKVFGE---SRITIISQAFHNQRAIWLAQQYGIDAI 172
Query: 201 ASCSDYLNAYYS 212
+ LN +
Sbjct: 173 GVNAPDLNKRHG 184
>gi|224585025|ref|YP_002638824.1| hypothetical protein SPC_3298 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224469553|gb|ACN47383.1| hypothetical protein SPC_3298 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 230
Score = 65.3 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 67/192 (34%), Gaps = 23/192 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ ++CF+L+ + + L+ + + ++ ++LG
Sbjct: 16 RRALTVACFLLVAAAVA-LFYSNWLIVNASQHLTWNDIQTVPARNVG--LVLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K E L+
Sbjct: 67 -KPGNRY-----FTRRINTAAALYHAGKVKW----LLVSGDNGKKE-YDEPSAMQQALIA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + + + I ++S A+H +R+ Q +GI+
Sbjct: 116 KGVPEAAIFCDYAGFSTLDSVVRARKVFGEN---RITIISQAFHNQRAIWLAQQYGIDAI 172
Query: 201 ASCSDYLNAYYS 212
+ LN +
Sbjct: 173 GVNAPDLNKRHG 184
>gi|145219718|ref|YP_001130427.1| hypothetical protein Cvib_0911 [Prosthecochloris vibrioformis DSM
265]
gi|145205882|gb|ABP36925.1| protein of unknown function DUF218 [Chlorobium phaeovibrioides DSM
265]
Length = 196
Score = 65.3 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 76/207 (36%), Gaps = 36/207 (17%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+S F+L+ S IG L L Y ++I++LG
Sbjct: 8 VSRFLLVLSAIG-------ALGFLGLGYIV-SFHAAPPVQSDVIIVLGG----------- 48
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
S R+ LYK ++++G D + + ++ GV
Sbjct: 49 ------DSGRRVKHGAALYKE----GYGARVVLTGIDRRFYRKGHLNWRERRMKALGVPL 98
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ--LYFQHFGINTKASC 203
+ + ++T+S T+ A SS+++K + ++VS H+ R + G +
Sbjct: 99 NAVLVDTRSETTWDEAVNSSALMKQRGWRTALVVSDPPHMLRLKKTWEAAFEGTDQTFVL 158
Query: 204 SDYLNAYYSII-----PLSANFYLTEL 225
+ ++ + P+S F ++E+
Sbjct: 159 TATKPGWWDPLLWWRNPISYRFVISEV 185
>gi|255523534|ref|ZP_05390502.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296186506|ref|ZP_06854909.1| SanA family protein [Clostridium carboxidivorans P7]
gi|255512791|gb|EET89063.1| protein of unknown function DUF218 [Clostridium carboxidivorans P7]
gi|296048953|gb|EFG88384.1| SanA family protein [Clostridium carboxidivorans P7]
Length = 231
Score = 65.3 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 45/111 (40%), Gaps = 8/111 (7%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
R+ + +YK + + I+++G E L + G++ I L+
Sbjct: 78 DRVDTALEIYKE----NSNLKILVTGDHGNLQ-YDEVNNMRKYLEQRGIKSSSIFLDHAG 132
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
T+++ + + K + ++V+ YHLKR+ + GI +D
Sbjct: 133 FSTYESIYRAKHIFK---VNSAVIVTQDYHLKRAVYSAKGMGIECYGVKAD 180
>gi|296140786|ref|YP_003648029.1| hypothetical protein Tpau_3100 [Tsukamurella paurometabola DSM
20162]
gi|296028920|gb|ADG79690.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 190
Score = 65.3 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 19/170 (11%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ +++LG + EPS R+ + + + + ++SG
Sbjct: 24 DQNASRDWVIVLG--------DRVVDGEPSVYLRERLDTALAVLRENRARRA----LVSG 71
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E L++ GV+ I + + T+ N + + + ILV+
Sbjct: 72 HAASTKGD-EVAAMRTYLIQHGVDPGKITDDRFGVTTY-NTCARARTV--FGIDSAILVT 127
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSA---NFYLTELAL 227
+HL+R+ + GI+ +D Y + + AL
Sbjct: 128 QDFHLRRAVALCRAEGIDAAGIEADSDAGVYLTVRNWVREIGLSRPKAAL 177
>gi|332672040|ref|YP_004455048.1| hypothetical protein Celf_3550 [Cellulomonas fimi ATCC 484]
gi|332341078|gb|AEE47661.1| protein of unknown function DUF218 [Cellulomonas fimi ATCC 484]
Length = 212
Score = 65.3 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 15/145 (10%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q ++++ G G T PS R+ LY +++SG
Sbjct: 32 QDVPPSGVVIVPGAGLRPDGT-------PSTYLRRRLDAAAELYAQGTVE----VVLVSG 80
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
D + E + L+E GV D + + LDT + + + ++V+
Sbjct: 81 -DNRTPQHDEPTAMRDWLVERGVPADRVVRDHAGLDTHDTCVRAHDV---FGVEEAVVVT 136
Query: 181 SAYHLKRSQLYFQHFGINTKASCSD 205
+YHL+R + GI+
Sbjct: 137 QSYHLRRMLFSCRAAGIDVTGVGVS 161
>gi|291302129|ref|YP_003513407.1| hypothetical protein Snas_4671 [Stackebrandtia nassauensis DSM
44728]
gi|290571349|gb|ADD44314.1| protein of unknown function DUF218 [Stackebrandtia nassauensis DSM
44728]
Length = 225
Score = 64.9 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/224 (14%), Positives = 80/224 (35%), Gaps = 27/224 (12%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
L S R++ ++ L + +G + + + + ++++LG
Sbjct: 4 LRWWSFRRLVVLA----LVASLGLSAVVGVARWWVAAGADGHVYGVGEVPKAPVVMVLGA 59
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
PS +R+ RLY++ K +++SG + Q+ E
Sbjct: 60 -------RVYEGGRPSPFLEARLELARRLYEAGKAE----VVLVSGDNGQEE-YNEVDPM 107
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+E GV + + + DT+ + + + + + +V+ +H++R+ +
Sbjct: 108 REWLIERGVPGERVVGDYAGFDTYDSCVRAREV---FGVEALTVVTQGFHVERAVTLCRQ 164
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
GI D + Y + ++E+ + A +
Sbjct: 165 AGIEANGVGDDSVRRYPRPWKVGT--------VREWAANVKAGW 200
>gi|261250945|ref|ZP_05943519.1| hypothetical protein VIA_000963 [Vibrio orientalis CIP 102891]
gi|260937818|gb|EEX93806.1| hypothetical protein VIA_000963 [Vibrio orientalis CIP 102891]
Length = 277
Score = 64.9 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 18/128 (14%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+L G + + + SR+ ++L + GG +
Sbjct: 6 VVLILGKRLENNR------LTPEGISRVEGLVKLLDQVNDQETAF--VFCGGVTDGQTTS 57
Query: 130 ESIVYNNKLLESGVE----RDDIKLETQSLDTFQNAQFSSSMIKNMQGKN------IILV 179
E+ + LL I +E+QS +T +N Q ++ + + + +I V
Sbjct: 58 EAEAMHQYLLRLLPAYKTLPPHILIESQSTNTIENIQNAADKLVDSKLCRVGQKIEVIFV 117
Query: 180 SSAYHLKR 187
S+ YHLKR
Sbjct: 118 SNDYHLKR 125
>gi|56415161|ref|YP_152236.1| hypothetical protein SPA3090 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197364091|ref|YP_002143728.1| hypothetical protein SSPA2886 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56129418|gb|AAV78924.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197095568|emb|CAR61133.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 230
Score = 64.9 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 67/192 (34%), Gaps = 23/192 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ ++CF+L+ + + L+ + + ++ ++LG
Sbjct: 16 RRALTVACFLLVAAAVA-LFYSNWLIVNASQHLTWNDIQTVPARNVG--LVLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K E L+
Sbjct: 67 -KPGNRY-----FTRRINTAAALYHAGKVKW----LLVSGDNGKKE-YDEPSAMQQALIA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + + + I ++S A+H +R+ Q +GI+
Sbjct: 116 KGVPEAAIFCDYAGFSTLDSVVRARKVFGE---SRITIISQAFHNQRAIWLAQQYGIDAI 172
Query: 201 ASCSDYLNAYYS 212
+ LN +
Sbjct: 173 GVNAPDLNKRHG 184
>gi|59713990|ref|YP_206765.1| hypothetical protein VF_A0807 [Vibrio fischeri ES114]
gi|59482238|gb|AAW87877.1| hypothetical protein VF_A0807 [Vibrio fischeri ES114]
Length = 217
Score = 64.9 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQ 153
+I SG + L+E+ + N + GV I +ET+
Sbjct: 36 LRVAEHAAQLYLDGYAPLLIFSGAQGRATEGLFTLSEAETFANVAKDMGVPSSAIIVETK 95
Query: 154 SLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYF 192
+ +T +N F+ +++K ++ILV Y +R F
Sbjct: 96 ATNTGENIFFTQALLKERNISVSSLILVQKPYMERRLLATF 136
>gi|314967236|gb|EFT11335.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2]
Length = 195
Score = 64.9 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 49/140 (35%), Gaps = 15/140 (10%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ ++ ++LG PS R+ LY+S K +I+ GD
Sbjct: 22 EPRDVAIVLGA-------QVLPSGTPSAYLRGRLDVAADLYRSGK-----AKVILVSGDN 69
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
++ E V L+ GV I + LDT+ + + I+V+ Y
Sbjct: 70 RETHYNEPKVMKTYLVSKGVPAARIVEDFAGLDTYDTCVRARRI---FGVDRAIMVTQDY 126
Query: 184 HLKRSQLYFQHFGINTKASC 203
H R+ + G++
Sbjct: 127 HEIRTVATCRMTGLDAVGVP 146
>gi|319781280|ref|YP_004140756.1| hypothetical protein Mesci_1548 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167168|gb|ADV10706.1| protein of unknown function DUF218 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 241
Score = 64.9 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 74/212 (34%), Gaps = 44/212 (20%)
Query: 22 KIFFMSCFMLLFSFIG-WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
++ +S +L F G +G + L +P + I++L G
Sbjct: 36 RLSALSVLILATLFAGGFGWFANKVSH---------LTTPANPARADAIIVLTGG----- 81
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG--GDPQKHGLAESIVYNNKL 138
SR+ M L S K ++ISG + L + + L
Sbjct: 82 -------------QSRLDAAMDLLASGKGE----RLLISGVHPSASRRQLQAATGGDKNL 124
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--G 196
V+ D +LDT NA+ S+ +++ +ILV++ YH+ RS L G
Sbjct: 125 FSCCVDIDR-----AALDTIGNAEESAKWVESHAYGTVILVTNNYHMPRSLLEMGRLLHG 179
Query: 197 INTKASC---SDYLNAYYSIIPLSANFYLTEL 225
+ S+ N + P + TE
Sbjct: 180 AKLEPYPVVNSNLDNGGWLTKPRALRVLFTEY 211
>gi|260466676|ref|ZP_05812863.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
gi|259029539|gb|EEW30828.1| protein of unknown function DUF218 [Mesorhizobium opportunistum
WSM2075]
Length = 241
Score = 64.9 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/216 (21%), Positives = 76/216 (35%), Gaps = 44/216 (20%)
Query: 18 QSIRKIFFMSCFMLLFSFIG-WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
++ +I +S +L F G +G + L +P + I++L G
Sbjct: 32 KAAIRISALSLLVLATLFAGGFGWFANKVSH---------LTTPANPTKADAIIVLTGG- 81
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG--GDPQKHGLAESIVY 134
SR+ M L S K ++ISG + L +
Sbjct: 82 -----------------QSRLDAAMELLASGKGE----RLLISGVHPSASRRQLQAATGG 120
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ KL V+ D +LDT NA+ S+ + N +ILV++ YH+ RS L
Sbjct: 121 DKKLFSCCVDIDR-----AALDTIGNAEQSAKWVTNHAYGTVILVTNNYHMPRSLLEMGR 175
Query: 195 F--GINTKASC---SDYLNAYYSIIPLSANFYLTEL 225
G + S+ N + P + TE
Sbjct: 176 LLHGARLEPYPVVNSNLDNGGWLTKPRALRVLFTEY 211
>gi|254500805|ref|ZP_05112956.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222436876|gb|EEE43555.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 243
Score = 64.9 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 25/175 (14%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ IV+L G R+ E +RL + + + + G +
Sbjct: 87 QADAIVVLTGG------------------QERVSEAVRLLEEGHAGRLLISGVHPGTTRK 128
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ + + L E VE D + +L+T NA +++ ++ ++++V+SAYH
Sbjct: 129 QIAVVTAS--AKPLEEGSVELDRV-----ALNTAGNATETANWVRKNGFDSLLVVTSAYH 181
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
L R+ + + L ++EY+ +A R
Sbjct: 182 LPRATAELSGALPDVTLIGYPVFAKDLQLEAWHTKPATIRLLIREYVKYTVARLR 236
>gi|320352842|ref|YP_004194181.1| hypothetical protein Despr_0715 [Desulfobulbus propionicus DSM
2032]
gi|320121344|gb|ADW16890.1| protein of unknown function DUF218 [Desulfobulbus propionicus DSM
2032]
Length = 212
Score = 64.9 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/193 (22%), Positives = 70/193 (36%), Gaps = 24/193 (12%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP--QWKKDGNIIVLL 72
+ + I K + L + I W I Y++ Q IVL
Sbjct: 1 MNVKRISKRMTGAFLFLCVAAIAWANITI-------NRYEQYTFDHLEQIPPAYCAIVL- 52
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
GTT + +RI +RLY++ K II+SG D + H E+
Sbjct: 53 --GTTKFLKNGRENHYYT----NRITAAVRLYRAGKCQ----KIIVSG-DNRTHAYNEAR 101
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
N +++ GV DI + L T + + +G I+VS +H R+
Sbjct: 102 DMKNDIVKQGVNERDIVCDFAGLRTLDSIVRFKEVFNQQKG---IVVSQKFHNSRAIYIG 158
Query: 193 QHFGINTKASCSD 205
+ +GI +D
Sbjct: 159 RSWGIELYGYNAD 171
>gi|197337877|ref|YP_002158482.1| hypothetical protein VFMJ11_A0934 [Vibrio fischeri MJ11]
gi|197315129|gb|ACH64578.1| conserved hypothetical protein [Vibrio fischeri MJ11]
Length = 217
Score = 64.9 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQ 153
+I SG + L+E+ + N + GV I +ET+
Sbjct: 36 LRVAEHAAQLYLDGYAPLLIFSGAQGRATEGLFTLSEAETFANVAKDMGVPSSAIIVETK 95
Query: 154 SLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYF 192
+ +T +N F+ +++K +++LV Y +R F
Sbjct: 96 ATNTGENIFFTQALLKEKNISISSLLLVQKPYMERRLLATF 136
>gi|299132206|ref|ZP_07025401.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
gi|298592343|gb|EFI52543.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
Length = 236
Score = 64.9 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 78/221 (35%), Gaps = 43/221 (19%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
F S F++ + W L+ +P + + IV+L G
Sbjct: 25 TRFLFSFFVIFLAGFAWFA------SQLRSEESKP------DRHADGIVVLTGG------ 66
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE---SIVYNNKL 138
SR+ + + L ++ISG +G A+ + + L
Sbjct: 67 ------------ASRVADALDLL----SKGYGKRLLISG-VHPANGAADILRAQPESQAL 109
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
L+ V+ D +++T NA + +K ++I+V+S YH+ R+ + H +
Sbjct: 110 LKCCVDLDR-----SAVNTRSNATETRRWVKERGFHSLIVVTSNYHMPRATVELTHAMPD 164
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++ + P + L EY+ L+A R
Sbjct: 165 IDLIFYPVVSEAWRGEPWWNSPAGVRLVALEYVKYLVAQVR 205
>gi|295108464|emb|CBL22417.1| Uncharacterized conserved protein [Ruminococcus obeum A2-162]
Length = 194
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 57/144 (39%), Gaps = 13/144 (9%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAI--RIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
+ + + +II + GNG + + A + + ++ + K C
Sbjct: 13 IFAEDEPEKADIIFIPGNGYSQMAEKAAALYGEKYAPFVLPSGKYSITVDKFC------- 65
Query: 115 TIIISGG-DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ- 172
++SG + E + L+++ V + I E Q+ T++NA+ S +
Sbjct: 66 -GVLSGQERYNGNYRTEWEFLKDVLVKNHVPDEVILKEDQATFTWENARLSREVTDKAGI 124
Query: 173 -GKNIILVSSAYHLKRSQLYFQHF 195
K +L YH +R+ +Y+Q
Sbjct: 125 EIKKALLCCKNYHARRALMYYQRA 148
>gi|319404819|emb|CBI78420.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 231
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 35/179 (19%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
L PQ + I++L G +RI ++L + + +
Sbjct: 70 LTPPQPLPKADAIIVLTGGK------------------NRIETGLKLLQ----KKLGSRL 107
Query: 117 IISGGDPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+ISG + H + N +L V+ D Q+++T NA+ S+ IK + K
Sbjct: 108 LISGVNTTTHPNRLIRIMNINPRLFSCCVDIDH-----QAVNTQGNAKESAHWIKKHRYK 162
Query: 175 NIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
+ +V+ YH+ RS L F++ +N A N + I + L LAL EYI
Sbjct: 163 TLYIVTHDYHMIRSLLEFKYLMPDVNFIAYPIKQ-NVADNWIKQANQIRL--LAL-EYI 217
>gi|262204162|ref|YP_003275370.1| hypothetical protein Gbro_4335 [Gordonia bronchialis DSM 43247]
gi|262087509|gb|ACY23477.1| protein of unknown function DUF218 [Gordonia bronchialis DSM 43247]
Length = 189
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 66/175 (37%), Gaps = 16/175 (9%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
M+L + + + T+ + + + Q + ++LG+ + +P +
Sbjct: 1 MVLVALVAVEFVITVSATWMYVASAGRISDGQDPTAADTALVLGS--LVSDGVPGDYVR- 57
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
R+ + LY + K II SG + E V L + GV DI
Sbjct: 58 -----GRLDTVLVLYHAKK----ITRIINSG-NGSAEAGDEPAVMRAYLQQRGVPAGDIV 107
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ LDT +A + + ++++ +HL+R+ ++ G++ +
Sbjct: 108 DDPAGLDT--DASCRRAH-DVFGVRRAVIITQDFHLRRAITLCRNLGVDATGVPA 159
>gi|320010228|gb|ADW05078.1| protein of unknown function DUF218 [Streptomyces flavogriseus ATCC
33331]
Length = 217
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 51/123 (41%), Gaps = 10/123 (8%)
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVY 134
P ++ I T+ LY+ M I+ +G + E+ Y
Sbjct: 22 DPQPCSVGIGLGSHDLGVADATVNLYQ----RGMFPLILFTGATSRTTRDRMPRGEAEHY 77
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYF 192
+ LE GV I +E ++ +T +N F+ ++ ++++ +++LVS Y +R+
Sbjct: 78 RERALELGVPASAILVEPRARNTGENINFARELLAERSVEVSSVLLVSKPYEERRAYATA 137
Query: 193 QHF 195
+
Sbjct: 138 RRL 140
>gi|261323939|ref|ZP_05963136.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261299919|gb|EEY03416.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 250
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 74/196 (37%), Gaps = 37/196 (18%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W ++ + +R++ +S +L +FI + + L+ + + +P P + IV+L
Sbjct: 36 WSVMMRILRRLQPVSI-ILFLAFIAF--LGGFLVFSEKVTGMQP---PVLSEPAEAIVVL 89
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAE 130
G SR+ + L K + ++ISG P + L
Sbjct: 90 TGG------------------QSRVKAGINLLKEKRGK----RLLISGVHPSTNEEALQR 127
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ + L ++ D +L+T NA S I+ +I+V++ YH+ RS L
Sbjct: 128 ATHADKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSIL 182
Query: 191 YF--QHFGINTKASCS 204
+ +
Sbjct: 183 EMSSRMKDVEFIPYPV 198
>gi|333025430|ref|ZP_08453494.1| hypothetical protein STTU_2934 [Streptomyces sp. Tu6071]
gi|332745282|gb|EGJ75723.1| hypothetical protein STTU_2934 [Streptomyces sp. Tu6071]
Length = 198
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 10/134 (7%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESG 142
I LY + + T++ +GG+ E++ + ++
Sbjct: 12 IGLGSHDLGVATRAAELYHA----GLFPTLVFTGGNSPTTAKVFPRGEAVHFREHAIDLD 67
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGINTK 200
V I LE + +T QN + ++ + + ++LVS Y +RS + +
Sbjct: 68 VPASAILLEPHAANTGQNITLAREVLADAGITPEKVLLVSKPYMERRSYATARKLWPEAE 127
Query: 201 ASCSDYLNAYYSII 214
C+ + +
Sbjct: 128 MVCASETLEFDDYL 141
>gi|327193562|gb|EGE60452.1| hypothetical protein RHECNPAF_150012 [Rhizobium etli CNPAF512]
Length = 238
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 67/201 (33%), Gaps = 36/201 (17%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
F I + L+F+ L P + + IV+L G
Sbjct: 38 GFGCVLAIALLFGGFLRFADSVTTLKPPVEPKADAIVVLTGG------------------ 79
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN---KLLESGVERDDIKL 150
Y RI + + L + ++ISG A+ L V+
Sbjct: 80 YQRIDQAVELLQ----KGAGKRLLISG-VHPTTTPAQIRKMTQGSANLFSCCVDIGH--- 131
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASC---SD 205
+LDT NA+ +S+ I +++++V++ YH+ RS + I SD
Sbjct: 132 --DALDTIGNAEETSNWIHAKGYRSVLVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSD 189
Query: 206 YLNAYYSIIPLSANFYLTELA 226
+ P + L E A
Sbjct: 190 LKTRNWFTDPNAMRVMLAEYA 210
>gi|258542271|ref|YP_003187704.1| hypothetical protein APA01_11770 [Acetobacter pasteurianus IFO
3283-01]
gi|256633349|dbj|BAH99324.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256636408|dbj|BAI02377.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256639461|dbj|BAI05423.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256642517|dbj|BAI08472.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645572|dbj|BAI11520.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648625|dbj|BAI14566.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651678|dbj|BAI17612.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654669|dbj|BAI20596.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 171
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 13/150 (8%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
PS +R+ + + I +GG PQ +G E+ V +L++GV D I
Sbjct: 19 PSVALLNRVHSALVFGAAH----GPVVYIPTGGVPQ-NGQTEADVMAFCMLKAGVAPDTI 73
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
E + DTF +A + +++ + I +VSS HL R L + G +A
Sbjct: 74 LPEPTAGDTFDSAVVCTRLLRQAGYSAAQPIAVVSSPLHLPRCVLLMRLAGWKVQAVP-- 131
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILI 235
+L A + + E + +
Sbjct: 132 FLRAQPHVPNMRKKLL---RIAHECLALPW 158
>gi|209809049|ref|YP_002264587.1| hypothetical protein VSAL_II0237 [Aliivibrio salmonicida LFI1238]
gi|208010611|emb|CAQ80991.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
Length = 210
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 6/101 (5%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQ 153
+I SG + L+E+ + N + GV I LET+
Sbjct: 36 LRVAEHAAQLYLDGFAPLVIFSGAQGRATEGLFTLSEAETFANVAKDMGVPSSAILLETK 95
Query: 154 SLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYF 192
+ +T +N F+ ++K +++LV Y +R F
Sbjct: 96 ATNTGENIFFTQDLLKEKNITLNSLLLVQKPYMERRLLATF 136
>gi|187736260|ref|YP_001878372.1| protein of unknown function DUF218 [Akkermansia muciniphila ATCC
BAA-835]
gi|187426312|gb|ACD05591.1| protein of unknown function DUF218 [Akkermansia muciniphila ATCC
BAA-835]
Length = 220
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHG---LAESIVYNNKLLESGVERDDIKLETQS 154
+ ++ SGG + G + E+ ++ ++ GV D I +E +S
Sbjct: 34 IRVAEYAAELYARKLAPLLLFSGGMGRFTGEWAVPEAELFAEAAMKKGVPGDCILIENKS 93
Query: 155 LDTFQNAQFSSSMIKNMQ---GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
+T +N +FS ++++ +II + Y +R+ Q + + S ++
Sbjct: 94 TNTGENVRFSRAVLEKAGIPEPSSIIALQKPYMERRTLATLQAQWPEVRVAVSSPPFSFR 153
Query: 212 SII 214
+
Sbjct: 154 EYL 156
>gi|207858479|ref|YP_002245130.1| hypothetical protein SEN3064 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|206710282|emb|CAR34640.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
Length = 230
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 67/192 (34%), Gaps = 23/192 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ ++CF+L+ + + L+ + + ++ ++LG
Sbjct: 16 RRALTVACFLLVAAGVA-LFYSNWLIVNASQHLTWNGIQTVPARNVG--LVLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K E L+
Sbjct: 67 -KPGNRY-----FTRRINTAAALYHAGKVKW----LLVSGDNGKKE-YDEPSAMQQALIA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + + + I ++S A+H +R+ Q +GI+
Sbjct: 116 KGVPEAAIFCDYAGFSTLDSVVRARKVFGE---SRITIISQAFHNQRAIWLAQQYGIDAI 172
Query: 201 ASCSDYLNAYYS 212
+ LN +
Sbjct: 173 GVNAPDLNKRHG 184
>gi|317471600|ref|ZP_07930944.1| DUF218 domain-containing protein [Anaerostipes sp. 3_2_56FAA]
gi|316900915|gb|EFV22885.1| DUF218 domain-containing protein [Anaerostipes sp. 3_2_56FAA]
Length = 200
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 73/213 (34%), Gaps = 28/213 (13%)
Query: 32 LFSFIGWGIIPTILLKHL-----QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
L+ G L + Q + + K + I++ P
Sbjct: 10 LWFLPGILPAGFSLFSYRKLHGKQKRAAADVFFCEALKKRDGILV--------PGALVKN 61
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
Q R+ +RLY++ I+ISG E LL G+ ++
Sbjct: 62 GVIGAQLKDRLDGALRLYRASIGKF----ILISG------TRKEVKFMKMYLLFRGIPQE 111
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+I + + LDTF+ + + GK+ + + ++ R+ + G+N A SD
Sbjct: 112 NIYEDREGLDTFRTMKNT---CSAFPGKSFYVCTQKLYVPRTDYLAEAAGLNAHAVISDS 168
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ ++ AL E G++ + R
Sbjct: 169 VIYQSRHKDRIREYFAASKALLE--GVVYQWIR 199
>gi|167746797|ref|ZP_02418924.1| hypothetical protein ANACAC_01509 [Anaerostipes caccae DSM 14662]
gi|167653757|gb|EDR97886.1| hypothetical protein ANACAC_01509 [Anaerostipes caccae DSM 14662]
Length = 200
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 73/213 (34%), Gaps = 28/213 (13%)
Query: 32 LFSFIGWGIIPTILLKHL-----QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIR 86
L+ G L + Q + + K + I++ P
Sbjct: 10 LWFLPGILPAGFSLFSYRKLHGKQKRAAADVFFCEALKKRDGILV--------PGALVKN 61
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
Q R+ +RLY++ I+ISG E LL G+ ++
Sbjct: 62 GIIGAQLKDRLDGALRLYRASIGKF----ILISG------TRKEVKFMKMYLLFRGIPQE 111
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDY 206
+I + + LDTF+ + + GK+ + + ++ R+ + G+N A SD
Sbjct: 112 NIYEDREGLDTFRTMKNT---CSAFPGKSFYVCTQKLYVPRTDYLAEAAGLNAHAVISDS 168
Query: 207 LNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ ++ AL E G++ + R
Sbjct: 169 VIYQSRHKDRIREYFAASKALLE--GVVYQWIR 199
>gi|315107767|gb|EFT79743.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
Length = 206
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 60/179 (33%), Gaps = 22/179 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+C + +G + L SY + + IVL G ++P+
Sbjct: 1 MSTCIAAFVALLGPWTLAAAL------SYGKVHDVADTEPRDVAIVL---GAQVLPS--- 48
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
PS R+ LY+S K +I+ GD ++ E V L+ GV
Sbjct: 49 --GTPSAYLRGRLDVAADLYRSGK-----AKVILVSGDNRETHYNEPKVMKTYLVSKGVP 101
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
I + L T+ + + I+V+ YH R+ + G++
Sbjct: 102 AARIVEDFAGLGTYDTCVRARRI---FGVDRAIMVTQDYHEIRTVATCRMTGLDAVGVP 157
>gi|302865715|ref|YP_003834352.1| hypothetical protein Micau_1214 [Micromonospora aurantiaca ATCC
27029]
gi|302568574|gb|ADL44776.1| protein of unknown function DUF218 [Micromonospora aurantiaca ATCC
27029]
Length = 224
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 109 QHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
+ I+ +G + E++ Y +E GV + + +E ++ +T +N +FS
Sbjct: 58 HEGLFPRIVFTGANAPTTVERFPRGEAVHYREYAVEQGVPPEAVLVEPRATNTAENLEFS 117
Query: 165 SSMI--KNMQGKNIILVSSAYHLKRSQLYFQ 193
+++ + + ++++++S Y +R+ +
Sbjct: 118 RALLAERQIPVRSVLIMSRPYQQRRAYATCR 148
>gi|222087356|ref|YP_002545893.1| hypothetical protein Arad_4209 [Agrobacterium radiobacter K84]
gi|221724804|gb|ACM27960.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 240
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/214 (19%), Positives = 78/214 (36%), Gaps = 47/214 (21%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
F+F+ ++ + L F+ L P + + I++L G
Sbjct: 40 FAFV--FLVAIVFGGFLHFADSITTLKPPLEPKADAIIVLTGG----------------- 80
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG-----LAESIVYNNKLLESGVERDD 147
Y RI + + L + ++ISG P L +S L V D
Sbjct: 81 -YQRIDQAVELLR----TGAGNRLLISGAHPTTTPSQIRKLTQSPA---NLFNCCV---D 129
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG--INTKASC-- 203
I + ++DT NA+ ++ I K+I++V++ YH+ RS ++ +
Sbjct: 130 IGYD--AIDTIGNAREAAKWIHARGYKSILVVTNNYHMPRSLAELKYVDPATDFIPYPVV 187
Query: 204 -SDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
SD + P + + EY +L+A
Sbjct: 188 NSDLKTKNWFTDPNAL-----RTMIYEYAKVLLA 216
>gi|190893641|ref|YP_001980183.1| hypothetical protein RHECIAT_CH0004075 [Rhizobium etli CIAT 652]
gi|190698920|gb|ACE93005.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 236
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 68/201 (33%), Gaps = 36/201 (17%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
F I + L+F+ L P + + IV+L G
Sbjct: 36 GFGCVLAIALLFGGFLRFADSVTTLKPPVEPKADAIVVLTGG------------------ 77
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN---KLLESGVERDDIKL 150
Y RI + + L + + ++ISG A+ L V+
Sbjct: 78 YQRIDQAVELLQ----KGVGKRLLISG-VHPTTTPAQIRKMTQGSANLFSCCVDIGH--- 129
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASC---SD 205
+LDT NA+ +S+ I +++++V++ YH+ RS + I SD
Sbjct: 130 --DALDTIGNAEETSNWIHAKGYRSVLVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSD 187
Query: 206 YLNAYYSIIPLSANFYLTELA 226
+ P + L E A
Sbjct: 188 LKTRNWFTDPNAMRVMLAEYA 208
>gi|269964995|ref|ZP_06179160.1| hypothetical protein VMC_05900 [Vibrio alginolyticus 40B]
gi|269830298|gb|EEZ84523.1| hypothetical protein VMC_05900 [Vibrio alginolyticus 40B]
Length = 118
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ L+E G+ +D I E + T NA FSS + K+ ++SSA H++R Q F+
Sbjct: 1 MADWLIEKGISKDRIIEENYATSTVGNALFSSYALARHNIKHATIISSASHVRRGQTLFE 60
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
T + Y PL ++ E +GI R
Sbjct: 61 IASWQTGPQGITFDTVSYPDKPLKDLAKASDG---ELLGIYRDALR 103
>gi|255592437|ref|XP_002535694.1| conserved hypothetical protein [Ricinus communis]
gi|223522259|gb|EEF26690.1| conserved hypothetical protein [Ricinus communis]
Length = 194
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 54/138 (39%), Gaps = 12/138 (8%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ + +++ GN T+ S + R+ + ++++ C +I G
Sbjct: 38 EPADAVIVPGNTVNPDGTL-------SERLKGRLDAALEIFQAG-----GCKVIFVSGAV 85
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
G+ E+ LLE GV+ I ++ +T A ++ + ++ VS +
Sbjct: 86 GAEGIDEAEAMRRYLLERGVDSQAIIQDSSGFNTAATAANAALALHQRGYSKVLAVSQFF 145
Query: 184 HLKRSQLYFQHFGINTKA 201
H+ R Q + G+N
Sbjct: 146 HVPRLQWLLEAQGLNVVG 163
>gi|166368105|ref|YP_001660378.1| hypothetical protein MAE_53640 [Microcystis aeruginosa NIES-843]
gi|166090478|dbj|BAG05186.1| hypothetical protein MAE_53640 [Microcystis aeruginosa NIES-843]
Length = 207
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 70/218 (32%), Gaps = 52/218 (23%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L + + + L+ + +GW L L+ + +P I +LG
Sbjct: 14 SLKAKLGKSRLKLLAIPLILAILGW------LYHDLRQQWLKP----------EAIFVLG 57
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
R +L K I +S G P+++
Sbjct: 58 G------------------HADRERFAAKLAKEY----PDLPIWVSSGSPRRY------- 88
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL--- 190
++G+ + + L+ + DT N + +K ++ LV+S H++R++L
Sbjct: 89 VRKIFKKAGIPPERLHLDYNARDTVTNFTSLADQLKAQGIDSVYLVTSDNHMRRARLVGE 148
Query: 191 -YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
F GI K + PL + A+
Sbjct: 149 IVFGSRGIMIKPVTVPSQSPPE---PLEKSLRDGFRAI 183
>gi|315104704|gb|EFT76680.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2]
Length = 206
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 60/179 (33%), Gaps = 22/179 (12%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+C + +G + L SY + + IVL G ++P+
Sbjct: 1 MSTCIAAFVALLGPWTLAAAL------SYGKVHDVADTEPRDVAIVL---GAQVLPS--- 48
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
PS R+ LY+S K +I+ GD ++ E V L+ GV
Sbjct: 49 --GTPSAYLRGRLDVAADLYRSGK-----AKVILVSGDNRETHYNEPKVMKTYLVSKGVP 101
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
I + L T+ + + I+V+ YH R+ + G++
Sbjct: 102 AARIVEDFAGLGTYDTCVRARRI---FGVDRAIMVTQDYHEIRTVATCRMTGLDAVGVP 157
>gi|159027601|emb|CAO86973.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 206
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 67/206 (32%), Gaps = 52/206 (25%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+ L+ + +GW L L+ + +P I +LG
Sbjct: 22 LLAIPLILAGLGW------LYLDLRQQWLKP----------EAIFVLGG----------- 54
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R +L K I +S G P+++ ++G+
Sbjct: 55 -------HADRERFAAKLAKEY----PDLPIWVSSGSPRRY-------VQKIFKKAGIPP 96
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL----YFQHFGINTKA 201
+ + L+ + DT N + +K ++ LV+S H++R++L F GI K
Sbjct: 97 ERLHLDYNARDTVTNFTSLADQLKAQGIDSVYLVTSDNHMRRARLVGEIIFGSRGIVIKP 156
Query: 202 SCSDYLNAYYSIIPLSANFYLTELAL 227
+ PL + A+
Sbjct: 157 VTVPSQSPPE---PLEKSLRDGFRAI 179
>gi|329963034|ref|ZP_08300814.1| hypothetical protein HMPREF9446_02407 [Bacteroides fluxus YIT
12057]
gi|328529075|gb|EGF56005.1| hypothetical protein HMPREF9446_02407 [Bacteroides fluxus YIT
12057]
Length = 194
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 54/144 (37%), Gaps = 24/144 (16%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
++ K ++I+LL +R + + LY + I
Sbjct: 11 VVDNDILKSSDVIILL-----------------EGDGLNRYQKAVELY----DQGIAAKI 49
Query: 117 IISGG--DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+ SG D + S V +L+ GV D I E +SL+T + A M K
Sbjct: 50 VFSGNITDYEYGSFPFSDVL-PYILKEGVPADAIVHEDKSLNTREQAVEVVKMAMENGWK 108
Query: 175 NIILVSSAYHLKRSQLYFQHFGIN 198
++LV+S H R+ L F ++
Sbjct: 109 RLVLVASHEHQYRAYLTFLRETLD 132
>gi|297160305|gb|ADI10017.1| hypothetical protein SBI_06897 [Streptomyces bingchenggensis BCW-1]
Length = 230
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Query: 116 IIISGGD----PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
++ +GG P+ E++ + + GV + I LE ++ +T QN S ++
Sbjct: 69 LVFTGGRNPTAPEWFPRGEAVHFREHAIALGVPEEAILLEPKARNTGQNITLSREVLAAA 128
Query: 172 Q--GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
+ ++LVS Y +R+ + + C + +
Sbjct: 129 GITPETVLLVSMPYMERRAFATARKVWPEVEVICVSEPLEFDDYL 173
>gi|306836617|ref|ZP_07469584.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
gi|304567539|gb|EFM43137.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
Length = 199
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 54/171 (31%), Gaps = 28/171 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+V+LG PS R+ L S I GG
Sbjct: 7 YVVVLG--------TAQYDGRPSRILAGRLRHAGELA-----TSRGLPAITVGGQLPGDR 53
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ V + L E + + LDT ++ +++I + I+V+ H R
Sbjct: 54 FTEAGVARDYLRE-HFPELQVSAVEEGLDTRESL---AAVIDAYGLADAIIVTDPLHRLR 109
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKE-----YIGI 233
+ + + G+N S + Y A P E YIG+
Sbjct: 110 TWVIAKQEGLNAHVSGTPYYPARRFSKPWWRYLA------HECGGLFYIGL 154
>gi|319407779|emb|CBI81430.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 233
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 31/151 (20%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P + I++L G +RI ++L + + +
Sbjct: 72 FTPPHPLPKADAIIVLTGGK------------------NRIETGLKLLQ----KKLGSRL 109
Query: 117 IISGGDPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+ISG + + H + N +L V+ D Q+++T NA+ S+ IK + K
Sbjct: 110 LISGVNTRTHPNKLIRIMNINPRLFSCCVDIDH-----QAINTRGNAEESAHWIKKNRYK 164
Query: 175 NIILVSSAYHLKRSQLYFQHF--GINTKASC 203
+ +V+ YH+ RS L F++ IN A
Sbjct: 165 TLYIVTDDYHMTRSLLEFKYLMPDINFIAYP 195
>gi|89514136|gb|ABD74926.1| hypothetical protein [Sinorhizobium fredii]
Length = 151
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 9/112 (8%)
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAESIVYNNKL-LES 141
+ + +S R+ +R K+ +I++ G P LA + + E
Sbjct: 7 AQGVLNDESRERMATAVRALKAGM-----APLILACGWPYRDDSDLAIADAMASFATEEL 61
Query: 142 GVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNIILVSSAYHLKRSQLYF 192
V+ D + +E S DT +A FS K I+ V+S+YH R+ F
Sbjct: 62 QVDSDKVLVERTSRDTVGDAVFSKRNFAIPFGWKRILTVTSSYHQARTLAIF 113
>gi|229085586|ref|ZP_04217821.1| hypothetical protein bcere0022_21960 [Bacillus cereus Rock3-44]
gi|228697734|gb|EEL50484.1| hypothetical protein bcere0022_21960 [Bacillus cereus Rock3-44]
Length = 150
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 6/100 (6%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ + LY+ + I+ SGG G E +E GV I E ++
Sbjct: 1 MEKAASLYEQ----GLAPYIVPSGGYKHHVGTTEWDFLRKIGVEHGVPETAILREDKAQH 56
Query: 157 TFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
T +NA+ S ++ +I+V A H +R+ L +Q
Sbjct: 57 TLENARLSLEVLHKTGVYPNKVIIVCKAGHSRRALLCYQA 96
>gi|183219644|ref|YP_001837640.1| putative vancomycin sensitivity protein SanA [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189909782|ref|YP_001961337.1| SanA-like protein [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167774458|gb|ABZ92759.1| SanA-related protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167778066|gb|ABZ96364.1| Putative vancomycin sensitivity protein SanA; putative signal
peptide [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 245
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 75/225 (33%), Gaps = 27/225 (12%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L + K F+ F+L+F +G+ + + L + + +P + + ++
Sbjct: 13 RFLSRVKWKSLFLG-FILVFGILGFVSLASNLGFWIVYQNSIHTNNPSEIPEAEVAIV-- 69
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
P PS R+ + LYK K I++SG + K E
Sbjct: 70 ------PGAAVYGKIPSPILMDRLVCGLDLYKQGKVK----KILLSGDNG-KSDYNELRP 118
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+L V +DI ++ T + + K I VS ++ L R+ +
Sbjct: 119 MLEYMLSHEVRPEDIFVDHAGFRTLDTLIRAKEV---FLVKKAIFVSQSFFLPRAIYLGK 175
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + + + +E+ ++A++
Sbjct: 176 ELELELYGYECNLRT----YKKETYYLF------REFSARMLAWW 210
>gi|313206619|ref|YP_004045796.1| hypothetical protein Riean_1129 [Riemerella anatipestifer DSM
15868]
gi|312445935|gb|ADQ82290.1| protein of unknown function DUF218 [Riemerella anatipestifer DSM
15868]
gi|315022113|gb|EFT35142.1| hypothetical protein RAYM_06447 [Riemerella anatipestifer RA-YM]
gi|325335940|gb|ADZ12214.1| Uncharacterized membrane protein [Riemerella anatipestifer RA-GD]
Length = 213
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 80/221 (36%), Gaps = 26/221 (11%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + K ++C + +FS + + ++K SY +S K ++LG
Sbjct: 2 KKLGKALLVTCVLSIFSVVTVILWCNYIIKSQSESYIFSNISEVPTKKVG--LVLGTSKY 59
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ IP + RI LYK+ K I+SG D + E+
Sbjct: 60 LQNGIPNCYFK------YRIDAAAELYKNGKVQY----FIVSG-DNSRKDYNETEDMKLD 108
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ G+ + I + T + + + K I++S +H +R+ + G+
Sbjct: 109 LMAHGIPENHIYQDFAGFRTLDSVIRAEDI---FGQKTFIIISQKFHNERAVYLARKNGL 165
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ +NAY + ++EY + +Y
Sbjct: 166 EAYGYNAQDVNAYAGLKTQ----------VREYFARVKVFY 196
>gi|148559698|ref|YP_001259812.1| hypothetical protein BOV_1921 [Brucella ovis ATCC 25840]
gi|189025061|ref|YP_001935829.1| hypothetical protein BAbS19_I18730 [Brucella abortus S19]
gi|237816354|ref|ZP_04595347.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260546109|ref|ZP_05821849.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260562906|ref|ZP_05833392.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260567524|ref|ZP_05837994.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|265999274|ref|ZP_06111628.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|297247229|ref|ZP_06930947.1| hypothetical protein BAYG_00126 [Brucella abortus bv. 5 str. B3196]
gi|148370955|gb|ABQ60934.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|189020633|gb|ACD73355.1| hypothetical protein BAbS19_I18730 [Brucella abortus S19]
gi|237788421|gb|EEP62636.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260096216|gb|EEW80092.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260152922|gb|EEW88014.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260157042|gb|EEW92122.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|263092990|gb|EEZ17140.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|297174398|gb|EFH33745.1| hypothetical protein BAYG_00126 [Brucella abortus bv. 5 str. B3196]
Length = 300
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 73/198 (36%), Gaps = 41/198 (20%)
Query: 13 WHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
W ++ + +R++ + F+ + +F+G ++ + + +Q P + IV
Sbjct: 86 WSVMMRILRRLQPVSIILFLAVIAFLGGFLVFSEKVTGMQ--------PPVLSEPAEAIV 137
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGL 128
+L G SR+ + L K + ++ISG P + L
Sbjct: 138 VLTGG------------------QSRVKAGINLLKEKRGK----RLLISGVHPSTNEEAL 175
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + L ++ D +L+T NA S I+ +I+V++ YH+ RS
Sbjct: 176 QRATHADKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRS 230
Query: 189 QLYF--QHFGINTKASCS 204
L + +
Sbjct: 231 ILEMSSRMKDVEFIPYPV 248
>gi|15966410|ref|NP_386763.1| hypothetical protein SMc00715 [Sinorhizobium meliloti 1021]
gi|307300553|ref|ZP_07580333.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
gi|307318418|ref|ZP_07597853.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
gi|15075681|emb|CAC47236.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306896100|gb|EFN26851.1| protein of unknown function DUF218 [Sinorhizobium meliloti AK83]
gi|306904719|gb|EFN35303.1| protein of unknown function DUF218 [Sinorhizobium meliloti BL225C]
Length = 232
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 67/185 (36%), Gaps = 49/185 (26%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ +R+ FF+ L G+ LQF+ L P + IV+L G
Sbjct: 23 KVLRRGFFVLLAFLTVFIAGF----------LQFADTVASLQPPATPKADAIVVLTGGFQ 72
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG-------GDPQKHGLAE 130
RI + + L K ++ISG +++ +
Sbjct: 73 ------------------RIDQAVDLLK----LGAGKRLLISGVHPSTTRSQIRRNTQSS 110
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ L + V+ ++DT NA +S I+N + I++V++ YH+ RS L
Sbjct: 111 AD-----LFKCCVDIGH-----AAIDTIGNATETSLWIRNRGYRTILVVTNNYHMPRSLL 160
Query: 191 YFQHF 195
+
Sbjct: 161 ELRRA 165
>gi|86359387|ref|YP_471279.1| hypothetical protein RHE_CH03804 [Rhizobium etli CFN 42]
gi|86283489|gb|ABC92552.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 191
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 60/177 (33%), Gaps = 36/177 (20%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
L P + + IV+L G Y RI + + L + ++
Sbjct: 15 LKPPVEPKADAIVVLTGG------------------YQRIDQAVELLQ----KGAGKRLL 52
Query: 118 ISGGDPQKHGLAESIVYNN---KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
ISG A+ L V+ ++DT NA+ +S+ I +
Sbjct: 53 ISG-VHPTTTPAQIRKMTQGSADLFSCCVDIGH-----DAIDTIGNAEETSNWIHAKGYR 106
Query: 175 NIILVSSAYHLKRSQLYFQHF--GINTKASC---SDYLNAYYSIIPLSANFYLTELA 226
++++V++ YH+ RS + I SD + P + L E A
Sbjct: 107 SVLVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSDLKTRNWFTDPNAMRVMLAEYA 163
>gi|296102438|ref|YP_003612584.1| hypothetical protein ECL_02085 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295056897|gb|ADF61635.1| hypothetical protein ECL_02085 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 264
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 18/143 (12%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR------LYKSCKQHSMHC 114
Q + ++++L G +IPTI A + Q I LY + +H +
Sbjct: 30 QPGQSVDMVIL--AGNAVIPTIEAACRLAAEQGVPMIISGGIGHSTTFLYAAIAKHPRYH 87
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ- 172
TI +G AE+ + + + + D + +E QS + +NA+FS ++K+ Q
Sbjct: 88 TIPTTG-------RAEAAILADIARQFWQIPADRVWVEDQSTNCGENARFSRELMKHHQF 140
Query: 173 -GKNIILVSSAYHLKRSQLYFQH 194
+ +++V +R+ F
Sbjct: 141 APERVLVVQDPTMQRRTMATFAR 163
>gi|213419370|ref|ZP_03352436.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
Length = 249
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 67/203 (33%), Gaps = 24/203 (11%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
M+CF+L+ + + L+ + + ++ ++LG P
Sbjct: 1 MACFLLVAAGVA-LFYSNWLIVNASQHLTWNDIQTVPARNVG--LVLGA-------KPGN 50
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R RI LY + K +++SG + +K E L+ GV
Sbjct: 51 RY-----FTRRINTAAALYHAGKVKW----LLVSGDNGKKE-YDEPSAMQQALIAKGVPE 100
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I + T + + + I ++S A+H +R+ Q +GI+ +
Sbjct: 101 AAIFCDYAGFSTLDSVVRARKVFGE---SRITIISQAFHNQRAIWLAQQYGIDAIGVNAP 157
Query: 206 YLNAYYS-IIPLSANFYLTELAL 227
LN + L L
Sbjct: 158 DLNKRHGTYTRLREKLARVSAVL 180
>gi|290954919|ref|YP_003486101.1| GdmH-like transporter [Streptomyces scabiei 87.22]
gi|260644445|emb|CBG67530.1| GdmH-like transport-associated protein [Streptomyces scabiei 87.22]
Length = 202
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 3/123 (2%)
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G+GT + + P+ +R + +I SGG AE+
Sbjct: 37 GSGTEAVVVLGYRNPGPTVNPINRWRVRAGIRSVAADGGRATVVIFSGG-ATGSSAAEAE 95
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ + + LE +S T++N ++++ I +VS H +++ Y
Sbjct: 96 LMADYAQSVLGFDGTVLLEGRSTTTWENITNVIPLLED--VDRIKIVSQPAHALKARAYL 153
Query: 193 QHF 195
+
Sbjct: 154 RRQ 156
>gi|307330069|ref|ZP_07609220.1| protein of unknown function DUF218 [Streptomyces violaceusniger Tu
4113]
gi|306884330|gb|EFN15365.1| protein of unknown function DUF218 [Streptomyces violaceusniger Tu
4113]
Length = 225
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD 146
I + LY+ + T S ++ E++ Y + LE GV
Sbjct: 30 IGLGSHDLGVADTAVDLYERGMAPLLVFTGATSPTTRERMPRGEAVHYRERALELGVPSS 89
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHF 195
+ LE + +T +N +FS ++++ +++L+S Y +RS +
Sbjct: 90 AVLLEPHARNTGENIRFSKALLEESGIDVSSVLLISKPYEERRSYATARKL 140
>gi|307105797|gb|EFN54045.1| hypothetical protein CHLNCDRAFT_136117 [Chlorella variabilis]
Length = 363
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 53/172 (30%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ--------------- 109
+ I++LG G ++P + R+ ++ LY +
Sbjct: 83 RYDAIMMLGGGLFPDGSLPEWVVR-------RLEGSLHLYHQQQALHAASQTAAAATPTP 135
Query: 110 -----------------HSMHCTIIISGGDPQKHGL---------AESIVYNNKLLESGV 143
+ C I++ G ES Y L+ GV
Sbjct: 136 TPTRSADGCPGQPWRAAAAGPCPIVLLGAATPHKPPVMDDRGYVLYESTAYAAYLMGRGV 195
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIK---NMQGKNIILVSSAYHLKRSQLYF 192
D+ ETQS DT N FS +++ + I +V+S +H+ R+Q F
Sbjct: 196 PAGDLLKETQSCDTVGNGYFS--LLQHALPAGWRRIAVVTSEFHMPRTQATF 245
>gi|209551150|ref|YP_002283067.1| hypothetical protein Rleg2_3574 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536906|gb|ACI56841.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 238
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 66/201 (32%), Gaps = 36/201 (17%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
F I + L+F+ L P + + IV+L G
Sbjct: 38 GFACVLAIALVFGGFLRFADSVTTLKPPAEPKADAIVVLTGG------------------ 79
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN---KLLESGVERDDIKL 150
Y RI + + L + ++ISG + L V+
Sbjct: 80 YQRIDQAVELLQ----KGAGKRLLISG-VHPTTTPRQIRRMTQGSADLFSCCVDIGH--- 131
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASC---SD 205
++DT NA+ +S+ I +++I+V++ YH+ RS + I SD
Sbjct: 132 --DAIDTIGNAEEASNWIHANGYRSVIVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSD 189
Query: 206 YLNAYYSIIPLSANFYLTELA 226
+ P + L E A
Sbjct: 190 LKTRNWFTDPNAMRVMLAEYA 210
>gi|75674776|ref|YP_317197.1| hypothetical protein Nwi_0578 [Nitrobacter winogradskyi Nb-255]
gi|74419646|gb|ABA03845.1| Protein of unknown function DUF218 [Nitrobacter winogradskyi
Nb-255]
Length = 241
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/216 (18%), Positives = 77/216 (35%), Gaps = 35/216 (16%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
+ +F+G + L L+ +P + + IV+L G+
Sbjct: 24 LLATLVAAAGIAFVGAAVGFVGFLSQLRGVETKPA------ANADGIVVLTGGS------ 71
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK--HGLAESIVYNNKLLE 140
SRI + + L ++ISG P ++ S+ + +LL
Sbjct: 72 ------------SRISDAVDLLAG----GYGKRLLISGVHPTNGVSDISRSLPDSQRLLT 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
V+ D +++T NA + + +++I+V+S YH+ R+ + H +
Sbjct: 116 CCVDLDR-----SAVNTRSNASETRRWVDGQGFRSLIVVTSNYHMPRAIVELSHAMPDVT 170
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + P + L L EY+ L A
Sbjct: 171 LIPFAVIGEKWREEPWWTSGATLRLLLSEYVKYLAA 206
>gi|256112323|ref|ZP_05453244.1| hypothetical protein Bmelb3E_06514 [Brucella melitensis bv. 3 str.
Ether]
Length = 208
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 40/191 (20%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++ + + ++ G+ + + + P + IV+L G
Sbjct: 2 RRLQPVSIILFLAVIAFLGGFLVFSEKVTG---------MQPPVLSEPAEAIVVLTGG-- 50
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAESIVYN 135
SR+ + L K + ++ISG P + L + +
Sbjct: 51 ----------------QSRVKAGINLLKEKRGK----RLLISGVHPSTNEEALQRATHAD 90
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF--Q 193
L ++ D +L+T NA S I+ +I+V++ YH+ RS L +
Sbjct: 91 KSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSSR 145
Query: 194 HFGINTKASCS 204
+
Sbjct: 146 MKDVEFIPYPV 156
>gi|89075875|ref|ZP_01162254.1| Rhs family protein [Photobacterium sp. SKA34]
gi|89048404|gb|EAR53981.1| Rhs family protein [Photobacterium sp. SKA34]
Length = 539
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 53/141 (37%), Gaps = 22/141 (15%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+K ++I+ LG P +E + R Y+ K ++
Sbjct: 28 SPMEKPIDLIITLGLEVNRTSCTPRQLLE---------YRADRAYEVAKSLENPIYLLTG 78
Query: 120 GGDPQ-------KHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
G+P K E+ L+E V+ + I LE S T +NA + +I +
Sbjct: 79 KGNPTTVQTCVIKGKSTEAQALKKILIEKHHVKENQIILEQNSTTTDENAIEAKIIIDKL 138
Query: 172 QGKNI-----ILVSSAYHLKR 187
+ K + LVSS YH+ R
Sbjct: 139 KDKGVNINSYQLVSSHYHIFR 159
>gi|300775301|ref|ZP_07085163.1| SanA protein [Chryseobacterium gleum ATCC 35910]
gi|300506041|gb|EFK37177.1| SanA protein [Chryseobacterium gleum ATCC 35910]
Length = 214
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 18/151 (11%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+P+ Y+RI LYKS K II+SG D E L++ GV +D
Sbjct: 64 QPNAYFYNRIKAAADLYKSGKIQY----IIVSG-DNSTKDYNEPEDMQFALIQEGVPKDK 118
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I L+ T + + + +I++S +H +R+ + G+ + +
Sbjct: 119 IILDHAGFRTLDSVVRAKDIFSQT---KLIIISQKFHNERAVFLARKNGMEAFGYNAADV 175
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
N Y + ++EY AY+
Sbjct: 176 NKYAGLKTN----------MREYAAKAKAYW 196
>gi|261221047|ref|ZP_05935328.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265997008|ref|ZP_06109565.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260919631|gb|EEX86284.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262551476|gb|EEZ07466.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 254
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 73/198 (36%), Gaps = 41/198 (20%)
Query: 13 WHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
W ++ + +R++ + F+ + +F+G ++ + + +Q P + IV
Sbjct: 40 WSVMMRILRRLQPVSIILFLAVIAFLGGFLVFSEKVTGMQ--------PPVLSEPAEAIV 91
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGL 128
+L G SR+ + L K + ++ISG P + L
Sbjct: 92 VLTGG------------------QSRVKAGINLLKEKRGK----RLLISGVHPSTNEEAL 129
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + L ++ D +L+T NA S I+ +I+V++ YH+ RS
Sbjct: 130 QRATHADKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRS 184
Query: 189 QLYF--QHFGINTKASCS 204
L + +
Sbjct: 185 ILEMSSRMKDVEFIPYPV 202
>gi|302543503|ref|ZP_07295845.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
53653]
gi|302461121|gb|EFL24214.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
53653]
Length = 217
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 44/112 (39%), Gaps = 6/112 (5%)
Query: 100 TMRLYKSCKQHSMHCTIIISGGD----PQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
+ ++ SGG + E++ + L+ GV D I LE ++
Sbjct: 39 AAAFAARQFHAGLFPLLVFSGGSSPTTAGLYPRGEAVHFREHALDLGVPADAILLEPKAG 98
Query: 156 DTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+T QN FS +++ +++L++ Y +R+ + + C+
Sbjct: 99 NTGQNIAFSREVLREAGADVESVMLIAMPYMERRAYATCRKAWPEVEVVCAS 150
>gi|295837334|ref|ZP_06824267.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|295826490|gb|EFG64900.1| conserved hypothetical protein [Streptomyces sp. SPB74]
Length = 222
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 10/136 (7%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESG 142
I + LY++ T++ +GG+ E+I + ++ G
Sbjct: 36 IGLGSHDLGVATRSAELYRAGLFE----TLVFTGGNSPTTAKVFPRGEAIHFREHAIDLG 91
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IILVSSAYHLKRSQLYFQHFGINTK 200
V D I LE + +T +N S ++ ++LVS Y +RS + + +
Sbjct: 92 VPADAILLEPHAANTGENITLSREVLAASGIHPATVLLVSKPYMERRSFATARKLWPDVE 151
Query: 201 ASCSDYLNAYYSIIPL 216
C+ + +
Sbjct: 152 FLCASERLEFDDYLRS 167
>gi|37676157|ref|NP_936553.1| hypothetical protein VVA0497 [Vibrio vulnificus YJ016]
gi|37200698|dbj|BAC96523.1| uncharacterized conserved protein [Vibrio vulnificus YJ016]
Length = 285
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 44/131 (33%), Gaps = 21/131 (16%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+++LG P + SR+ + S K I GG Q
Sbjct: 7 VIVLGKRLFKNALTP--------EGVSRVDALVDAMASGKI-EPGSRIAFCGGITQGQTR 57
Query: 129 AESIVYNNKLLE------SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ------GKNI 176
+E+I + + +I LE +S T +N S ++ +
Sbjct: 58 SEAIAMFDYFQQRCHANNLTFSAQNILLEERSTSTVENIFEVSRLLNQSGQCSAGSVLKV 117
Query: 177 ILVSSAYHLKR 187
VS+ YHLKR
Sbjct: 118 TFVSNDYHLKR 128
>gi|23502843|ref|NP_698970.1| hypothetical protein BR1995 [Brucella suis 1330]
gi|62290842|ref|YP_222635.1| hypothetical protein BruAb1_1970 [Brucella abortus bv. 1 str.
9-941]
gi|82700754|ref|YP_415328.1| hypothetical protein BAB1_1995 [Brucella melitensis biovar Abortus
2308]
gi|254705003|ref|ZP_05166831.1| hypothetical protein Bsuib36_14000 [Brucella suis bv. 3 str. 686]
gi|256370397|ref|YP_003107908.1| hypothetical protein BMI_I2019 [Brucella microti CCM 4915]
gi|294851231|ref|ZP_06791904.1| hypothetical protein BAZG_00130 [Brucella sp. NVSL 07-0026]
gi|23348869|gb|AAN30885.1| conserved hypothetical protein [Brucella suis 1330]
gi|62196974|gb|AAX75274.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616855|emb|CAJ11951.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|256000560|gb|ACU48959.1| hypothetical protein BMI_I2019 [Brucella microti CCM 4915]
gi|294819820|gb|EFG36819.1| hypothetical protein BAZG_00130 [Brucella sp. NVSL 07-0026]
gi|326539710|gb|ADZ87925.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 212
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 64/194 (32%), Gaps = 40/194 (20%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + ++ + + ++ G+ + + + P + IV+L
Sbjct: 3 RILRRLQPVSIILFLAVIAFLGGFLVFSEKVTG---------MQPPVLSEPAEAIVVLTG 53
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAESI 132
G SR+ + L K + ++ISG P + L +
Sbjct: 54 G------------------QSRVKAGINLLKEKRGK----RLLISGVHPSTNEEALQRAT 91
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ L ++ D +L+T NA S I+ +I+V++ YH+ RS L
Sbjct: 92 HADKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEM 146
Query: 193 --QHFGINTKASCS 204
+ +
Sbjct: 147 SSRMKDVEFIPYPV 160
>gi|320158291|ref|YP_004190669.1| hypothetical protein VVM_00951 [Vibrio vulnificus MO6-24/O]
gi|319933603|gb|ADV88466.1| hypothetical protein VVMO6_03444 [Vibrio vulnificus MO6-24/O]
Length = 285
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 44/131 (33%), Gaps = 21/131 (16%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+++LG P + SR+ + S K I GG Q
Sbjct: 7 VIVLGKRLFKNALTP--------EGVSRVDALVEAMASGKI-EPGSRIAFCGGITQGQTR 57
Query: 129 AESIVYNNKLLE------SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ------GKNI 176
+E+I + + +I LE +S T +N S ++ +
Sbjct: 58 SEAIAMFDYFQQRCHANNLTFSAQNILLEERSTSTVENIFEVSRLLIQSGQCSTGSVLKV 117
Query: 177 ILVSSAYHLKR 187
VS+ YHLKR
Sbjct: 118 TFVSNDYHLKR 128
>gi|326774031|ref|ZP_08233313.1| hypothetical protein HMPREF0059_02437 [Actinomyces viscosus C505]
gi|326636170|gb|EGE37074.1| hypothetical protein HMPREF0059_02437 [Actinomyces viscosus C505]
Length = 227
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 17/175 (9%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+R + M L + TI H++ + +RP + ++LG
Sbjct: 5 VRISAAVMGVMALLAAGASIWAWTISAGHIETAGERPGDG--EAARAPVAIVLGAAVDAD 62
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+PS R+ LY S + + I++SG D ++ G E V LL
Sbjct: 63 -------GQPSPWLAHRLDTAAELYTSGRVEA----ILVSG-DNRRAGYDEPTVMRRYLL 110
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
G+ I ++ DT+ + + + +LV+ +H R+ +
Sbjct: 111 SQGIPDQAIAVDYAGFDTYDTCVRARRI---FGIERALLVTQDFHEPRAVAICRA 162
>gi|90426336|ref|YP_534706.1| hypothetical protein RPC_4865 [Rhodopseudomonas palustris BisB18]
gi|90108350|gb|ABD90387.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB18]
Length = 240
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 82/217 (37%), Gaps = 37/217 (17%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ ++ + F + G + + L L+ + +P ++ + IV+L G+
Sbjct: 24 RAAIVATLAIGFVGMASGFV--VFLSQLRGAEIQP------GRNADGIVVLTGGS----- 70
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK--HGLAESIVYNNKLL 139
SR+ + + L + ++ISG P + ++ S+ + +LL
Sbjct: 71 -------------SRVSDAIELLAAGYGR----RLLISGVHPTNGANDISRSLPDSQQLL 113
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
V+ D +++T NA + ++I+V+S YH+ R+ + H +
Sbjct: 114 SCCVDLDR-----SAINTRSNAAEARRWAHERGFHSLIVVTSNYHMPRAIVEMSHAMPDI 168
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + + P + L L EY + A
Sbjct: 169 ELIPFAVVGDKWRDDPWWTSGATFRLLLSEYAKYIAA 205
>gi|254718046|ref|ZP_05179857.1| hypothetical protein Bru83_00605 [Brucella sp. 83/13]
Length = 212
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 64/194 (32%), Gaps = 40/194 (20%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + ++ + + ++ G+ + + + P + IV+L
Sbjct: 3 RILRRLQPVSIILFLAVIAFLGGFFVFSEKVTG---------MQPPVLSEPAEAIVVLTG 53
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAESI 132
G SR+ + L K + ++ISG P + L +
Sbjct: 54 G------------------QSRVKAGINLLKEKRGK----RLLISGVHPSTNEEALQRAT 91
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ L ++ D +L+T NA S I+ +I+V++ YH+ RS L
Sbjct: 92 HADKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEM 146
Query: 193 --QHFGINTKASCS 204
+ +
Sbjct: 147 SSRMKDVEFIPYPV 160
>gi|265982992|ref|ZP_06095727.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|264661584|gb|EEZ31845.1| conserved hypothetical protein [Brucella sp. 83/13]
Length = 250
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 72/198 (36%), Gaps = 41/198 (20%)
Query: 13 WHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
W ++ + +R++ + F+ + +F+G + + + +Q P + IV
Sbjct: 36 WSVMMRILRRLQPVSIILFLAVIAFLGGFFVFSEKVTGMQ--------PPVLSEPAEAIV 87
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGL 128
+L G SR+ + L K + ++ISG P + L
Sbjct: 88 VLTGG------------------QSRVKAGINLLKEKRGK----RLLISGVHPSTNEEAL 125
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + L ++ D +L+T NA S I+ +I+V++ YH+ RS
Sbjct: 126 QRATHADKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRS 180
Query: 189 QLYF--QHFGINTKASCS 204
L + +
Sbjct: 181 ILEMSSRMKDVEFIPYPV 198
>gi|159038044|ref|YP_001537297.1| hypothetical protein Sare_2461 [Salinispora arenicola CNS-205]
gi|157916879|gb|ABV98306.1| protein of unknown function DUF218 [Salinispora arenicola CNS-205]
Length = 224
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSL 155
RL+++ + I+ +G + E++ Y ++ GV + I +E ++
Sbjct: 53 ATRLFQA----GLFPWIVFTGANAPTTVERFPRGEAVHYREYAVDQGVPPEAILVEPRAT 108
Query: 156 DTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+T +N +FS +++ + + ++++++S Y +R+ + + C+
Sbjct: 109 NTAENLKFSRALLAERRIPVESVLIMSRPYQQRRAYATCRLVWPEVEVVCAS 160
>gi|17986358|ref|NP_538992.1| hypothetical protein BMEI0074 [Brucella melitensis bv. 1 str. 16M]
gi|260755671|ref|ZP_05868019.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758896|ref|ZP_05871244.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260760620|ref|ZP_05872963.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884697|ref|ZP_05896311.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214946|ref|ZP_05929227.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261217820|ref|ZP_05932101.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261314966|ref|ZP_05954163.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316476|ref|ZP_05955673.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321332|ref|ZP_05960529.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261751141|ref|ZP_05994850.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261755703|ref|ZP_05999412.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265987548|ref|ZP_06100105.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265992020|ref|ZP_06104577.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993756|ref|ZP_06106313.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17981947|gb|AAL51256.1| hypothetical protein BMEI0074 [Brucella melitensis bv. 1 str. 16M]
gi|260669214|gb|EEX56154.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671052|gb|EEX57873.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675779|gb|EEX62600.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260874225|gb|EEX81294.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260916553|gb|EEX83414.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260922909|gb|EEX89477.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294022|gb|EEX97518.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261295699|gb|EEX99195.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303992|gb|EEY07489.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261740894|gb|EEY28820.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261745456|gb|EEY33382.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262764737|gb|EEZ10658.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263003086|gb|EEZ15379.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|264659745|gb|EEZ30006.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 250
Score = 63.0 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 73/198 (36%), Gaps = 41/198 (20%)
Query: 13 WHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
W ++ + +R++ + F+ + +F+G ++ + + +Q P + IV
Sbjct: 36 WSVMMRILRRLQPVSIILFLAVIAFLGGFLVFSEKVTGMQ--------PPVLSEPAEAIV 87
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGL 128
+L G SR+ + L K + ++ISG P + L
Sbjct: 88 VLTGG------------------QSRVKAGINLLKEKRGK----RLLISGVHPSTNEEAL 125
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + L ++ D +L+T NA S I+ +I+V++ YH+ RS
Sbjct: 126 QRATHADKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRS 180
Query: 189 QLYF--QHFGINTKASCS 204
L + +
Sbjct: 181 ILEMSSRMKDVEFIPYPV 198
>gi|256059967|ref|ZP_05450151.1| hypothetical protein Bneo5_06389 [Brucella neotomae 5K33]
Length = 212
Score = 63.0 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 40/194 (20%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + ++ + + + G+ + + + P + IV+L
Sbjct: 3 RILRRLQPVSIILFLAFIAFLGGFLVFSEKVTG---------MQPPVLSEPAEAIVVLTG 53
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAESI 132
G SR+ + L K + ++ISG P + L +
Sbjct: 54 G------------------QSRVKAGINLLKEKRGK----RLLISGVHPSTNEEALQRAT 91
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ L ++ D +L+T NA S I+ +I+V++ YH+ RS L
Sbjct: 92 HADKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEM 146
Query: 193 --QHFGINTKASCS 204
+ +
Sbjct: 147 SSRMKDVEFIPYPV 160
>gi|192293574|ref|YP_001994179.1| hypothetical protein Rpal_5216 [Rhodopseudomonas palustris TIE-1]
gi|192287323|gb|ACF03704.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
TIE-1]
Length = 241
Score = 63.0 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/227 (16%), Positives = 79/227 (34%), Gaps = 35/227 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ ++ +L F+ + L L+ + Q+P + + + IV+L
Sbjct: 16 RPVRRGGRLRATIVAVLALGFLVGAGGFVVFLSQLRGAEQKP------RHNADGIVVLTG 69
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG--GDPQKHGLAESI 132
G+ SR+ + + L + ++ISG ++ S+
Sbjct: 70 GS------------------SRVSDAVELLAA----GYGKRLLISGVHRTNGARDISRSV 107
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ V+ D ++DT NA + ++ +++I+V+S YH+ R+
Sbjct: 108 PESRDWFSCCVDLDR-----SAVDTRSNASETRRWVQERGFRSLIVVTSNYHMPRAIAEM 162
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
H + + + + P + L L EY L R
Sbjct: 163 SHAMPDVELIPFAVIGDKWRDEPWWTSGGTLRLLLSEYAKYLAVELR 209
>gi|148927862|ref|ZP_01811280.1| protein of unknown function DUF218 [candidate division TM7
genomosp. GTL1]
gi|147886790|gb|EDK72342.1| protein of unknown function DUF218 [candidate division TM7
genomosp. GTL1]
Length = 218
Score = 63.0 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 98 FETMRLYKSCKQ-HSMHCTIIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKLET 152
+ +Y + ++ISGG + E+ ++ + + GV + + LET
Sbjct: 36 DRRVAVYSAELFLKGYGNYLVISGGFGRISKDRFHKTEAELFADIAIGMGVPPEKVILET 95
Query: 153 QSLDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
++ +T +N +F+ +++ + ++ K+++LV Y +R+ F+
Sbjct: 96 KASNTGENIRFTYNLLMQRGLRPKSLLLVHKPYMERRTLATFKKQ 140
>gi|39937792|ref|NP_950068.1| hypothetical protein RPA4734 [Rhodopseudomonas palustris CGA009]
gi|39651652|emb|CAE30174.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 255
Score = 63.0 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/227 (16%), Positives = 79/227 (34%), Gaps = 35/227 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ ++ +L F+ + L L+ + Q+P + + + IV+L
Sbjct: 30 RPVRRGGRLRATIVAVLALGFLVGAGGFVVFLSQLRGAEQKP------RHNADGIVVLTG 83
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG--GDPQKHGLAESI 132
G+ SR+ + + L + ++ISG ++ S+
Sbjct: 84 GS------------------SRVSDAVELLAA----GYGKRLLISGVHRTNGARDISRSV 121
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ V+ D ++DT NA + ++ +++I+V+S YH+ R+
Sbjct: 122 PESRDWFSCCVDLDR-----SAVDTRSNASETRRWVQERGFRSLIVVTSNYHMPRAIAEM 176
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
H + + + + P + L L EY L R
Sbjct: 177 SHAMPDVELIPFAVIGDKWRDEPWWTSGGTLRLLLSEYAKYLAVELR 223
>gi|114570926|ref|YP_757606.1| hypothetical protein Mmar10_2376 [Maricaulis maris MCS10]
gi|114341388|gb|ABI66668.1| protein of unknown function DUF218 [Maricaulis maris MCS10]
Length = 195
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/207 (14%), Positives = 63/207 (30%), Gaps = 36/207 (17%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
QS + + ++L S IG+ + + P + I++L
Sbjct: 2 KQSWLWLRGLCFVVVLASMIGFAAYAGKVTGY---------DLPATDNTVDAIIVLTG-- 50
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
R+ L + + + + + +
Sbjct: 51 ----------------DAGRLSAGGELLQDGRASHLMI-------SGVHPSVTTADIRRQ 87
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF- 195
L + L ++ DT NA+ +++ ++ +I+V+S YHL RS L F+
Sbjct: 88 TGLGDDAFSCCVTLGREATDTVGNAREAAAYVQANGYDRLIIVTSDYHLPRSLLEFRSHM 147
Query: 196 -GINTKASCSDYLNAYYSIIPLSANFY 221
G++ + + L
Sbjct: 148 PGVDLIPYPVRTQAPWQDVGALRLWLQ 174
>gi|145294888|ref|YP_001137709.1| hypothetical protein cgR_0835 [Corynebacterium glutamicum R]
gi|140844808|dbj|BAF53807.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 151
Score = 62.6 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 62/171 (36%), Gaps = 27/171 (15%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG+ + SR+ + + + + +++SG
Sbjct: 4 IVVLGSKVVDGQVTDLL--------ASRLEKAIEV----SSMTPEAPVVVSG-------F 44
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ + L GV I E + T +N + + ++ + +V+S +H R+
Sbjct: 45 GEAAAMADYLRARGV--TTIVEEPWATSTNENLENAHALFPDTL--QWTVVTSGFHAWRT 100
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
L+ H GI K + +A + + F L L+ +L R
Sbjct: 101 YLWAWHLGIPIKVVTARTPSAERLGMAMRECFALPHSTLR----VLWRKIR 147
>gi|209883916|ref|YP_002287773.1| hypothetical protein OCAR_4768 [Oligotropha carboxidovorans OM5]
gi|209872112|gb|ACI91908.1| protein of unknown function [Oligotropha carboxidovorans OM5]
Length = 234
Score = 62.6 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 76/221 (34%), Gaps = 43/221 (19%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
F +S ++ + W L +P ++ + IV+L G
Sbjct: 25 TRFVVSFVIIFLAGFAWFA------GQLHSEEIKP------ERHADGIVVLTGG------ 66
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE---SIVYNNKL 138
SR+ + + L ++ISG +G A+ + L
Sbjct: 67 ------------ASRVADALDLL----SRGYGKRLLISG-VHPANGTADILRAQPERETL 109
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
L V+ D +++T NA + +K +++I+V+S YH+ R+ + H +
Sbjct: 110 LSCCVDLDR-----SAVNTRSNATETRRWVKERGFRSLIVVTSNYHMPRASVELSHAMPD 164
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
++ + P + L EY+ L A R
Sbjct: 165 IDLIFYPVVSEAWRGEPWWHSAAGIRLVALEYVKYLAAQVR 205
>gi|146279502|ref|YP_001169660.1| H+/gluconate symporter and related permease-like protein
[Rhodobacter sphaeroides ATCC 17025]
gi|145557743|gb|ABP72355.1| H+/gluconate symporter and related permease-like protein
[Rhodobacter sphaeroides ATCC 17025]
Length = 187
Score = 62.6 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+ LYK + ++ISG G E Y + L++GV + LE + +T +
Sbjct: 40 AIALYK----SGLTPKLLISGAGVAVDGSTEWSFYRDHALDAGVAESALLLEKAARNTAE 95
Query: 160 NAQFSSSMIKN----MQGKNIILVSSAYHLKRSQLYFQH 194
NA F +++I+ + +++ + + +H++R+ + +
Sbjct: 96 NAAFGAAVIEKELGWAKVRSLAVCAKPFHMRRAIMTLRR 134
>gi|322435817|ref|YP_004218029.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
gi|321163544|gb|ADW69249.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX9]
Length = 121
Score = 62.6 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 17/133 (12%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
LF F+ + ++ +++ + I++LG PT P +
Sbjct: 5 LGWLFLFVMTLAVIAAMV-----TFEAMPTHNTDATHFDTIIVLG-----WPTAPDGKA- 53
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
S +R+ E +R + + II+SGG + E+ +E+GV ++D+
Sbjct: 54 -SKIQTARVMEAVRELMAGRAGH----IIVSGGAAHSQFV-EAEAMAKVAIEAGVPQEDV 107
Query: 149 KLETQSLDTFQNA 161
+E ++++T QN
Sbjct: 108 IVEGRAMNTIQNI 120
>gi|242279972|ref|YP_002992101.1| hypothetical protein Desal_2506 [Desulfovibrio salexigens DSM 2638]
gi|242122866|gb|ACS80562.1| protein of unknown function DUF218 [Desulfovibrio salexigens DSM
2638]
Length = 214
Score = 62.6 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 65/200 (32%), Gaps = 42/200 (21%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWK-KDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L + IG + IL + F + LL + + + + IV+LG
Sbjct: 7 LLTLIGALTVAGILAAAVLFFFAPVLLQQEDELEKADAIVVLGG---------------- 50
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES------------IVYNNKL 138
Y R LY I+ S P E+ V+ + L
Sbjct: 51 --HYYRPLYAADLY----NKGYAPRILAS--KPVITPEIEAVRDLDIHFPYQWEVFRDVL 102
Query: 139 LESGVERDDIKLETQSL-DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF-- 195
L+ V + I+ ++ T A+ + K+IILV+S H +R+ + F+
Sbjct: 103 LKKDVPAERIEFFGKANISTLDEAEKLRDKLTPQ-IKSIILVTSPMHTRRAGIIFREILP 161
Query: 196 -GINTKASCSDYLNAYYSII 214
+ + Y
Sbjct: 162 PNVKIIVVGTPYEVTPERWW 181
>gi|306843432|ref|ZP_07476033.1| Hypothetical protein BIBO1_0084 [Brucella sp. BO1]
gi|306276123|gb|EFM57823.1| Hypothetical protein BIBO1_0084 [Brucella sp. BO1]
Length = 250
Score = 62.6 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 72/198 (36%), Gaps = 41/198 (20%)
Query: 13 WHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
W ++ + +R++ + F+ + +F+G + + + +Q P + IV
Sbjct: 36 WSVMMRILRRLQPVSIILFLAVIAFLGGFFVFSEKVTGMQ--------PPVLSEPAEAIV 87
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGL 128
+L G SR+ + L K + ++ISG P + L
Sbjct: 88 VLTGG------------------QSRVKAGINLLKERRGK----RLLISGVHPSTNEEAL 125
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + L ++ D +L+T NA S I+ +I+V++ YH+ RS
Sbjct: 126 QRATHADKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRS 180
Query: 189 QLYF--QHFGINTKASCS 204
L + +
Sbjct: 181 ILEMSSRMKDVEFIPYPV 198
>gi|218462839|ref|ZP_03502930.1| hypothetical protein RetlK5_26822 [Rhizobium etli Kim 5]
Length = 236
Score = 62.6 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/229 (17%), Positives = 76/229 (33%), Gaps = 51/229 (22%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + +R F + F G+ + L P + + IV+L G
Sbjct: 28 IRRLLRWGGFGCVLAIALLFGGFLRFADSVT----------TLKPPVEPKADAIVVLTGG 77
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
Y RI + + L + ++ISG A+
Sbjct: 78 ------------------YQRIDQAVELLQ----KGAGKRLLISG-VHPTTTPAQIRKMT 114
Query: 136 N---KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
L V+ ++DT NA+ +S+ I +++++V++ YH+ R+
Sbjct: 115 QGSADLFSCCVDIGH-----DAIDTIGNAEETSNWIHAKGYRSVLVVTNNYHMPRTLAEL 169
Query: 193 QHF--GINTKASC---SDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ I SD + P + + L EY+ +L+A
Sbjct: 170 SYVDPDIEFIPYPVVNSDLKTRNWFTDPNA-----MRVMLAEYLKVLLA 213
>gi|295837325|ref|ZP_06824258.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|295826488|gb|EFG64899.1| conserved hypothetical protein [Streptomyces sp. SPB74]
Length = 223
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 53/122 (43%), Gaps = 10/122 (8%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQS 154
LY++ + ++ +GG+ E++ ++ L GV + LE ++
Sbjct: 49 HAAHLYRA----GLFPVLVFTGGNSSDTLGVFPRGEAVHFHEHALALGVPAHAMLLEPKA 104
Query: 155 LDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
+T QN F+ + +++ +++ LV+ Y +R+ F+ + C+ ++ S
Sbjct: 105 ANTGQNIAFARETLTAADVRARSVPLVTMPYMERRAFATFRKQWPEVEVVCASDPLSFDS 164
Query: 213 II 214
+
Sbjct: 165 YL 166
>gi|189913052|ref|YP_001964941.1| hypothetical protein LBF_4206 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|189913381|ref|YP_001964610.1| hypothetical protein LEPBI_II0213 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|167777728|gb|ABZ96028.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167781449|gb|ABZ99746.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 222
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 12/151 (7%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGG----DPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
F S Q + I+ SGG +E+ + + +E GV ++ I LE Q
Sbjct: 42 FRVAEYAASLYQKNFASHILFSGGLNFFTKHVFPNSEAESFADCAMERGVPKESIFLEPQ 101
Query: 154 SLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
S +T +N QFS ++ ++ +II V R QL Q + Y
Sbjct: 102 STNTGENIQFSQKLLFDLGFQCDSIIAVQKPSMTLRIQLALQKQWPRPNFLITS---PNY 158
Query: 212 SIIPLSANFYLTELALKEY---IGILIAYYR 239
S++ + + + E +G +IAY +
Sbjct: 159 SLLESPHSKINLFMIINEIVGDLGRVIAYPK 189
>gi|42527834|ref|NP_972932.1| sanA protein, putative [Treponema denticola ATCC 35405]
gi|41818662|gb|AAS12851.1| sanA protein, putative [Treponema denticola ATCC 35405]
Length = 226
Score = 62.2 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 69/189 (36%), Gaps = 20/189 (10%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + I+KI F+ IG I +L SY +P + V++
Sbjct: 1 MKSKPIKKIALCIIFLFALILIGIVSINIYML-----SYSKPYIYKNISALPEKYVVIVP 55
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + S RI + +C ++ ++ISG D + G E
Sbjct: 56 GAKVYKNT------VSHVVRDRIEAAV----NCLKNKKAERVLISG-DHGRKGYDEVNRM 104
Query: 135 NNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ + G + + I ++ T++ + + ++ ++V+ A+H R+ +
Sbjct: 105 RIFMQDVYGTDENLIFMDHAGFSTYETMYRAREI---FCIEDAVVVTQAFHTARAVYIGR 161
Query: 194 HFGINTKAS 202
G++ A
Sbjct: 162 KLGLDVIAY 170
>gi|161503276|ref|YP_001570388.1| hypothetical protein SARI_01346 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160864623|gb|ABX21246.1| hypothetical protein SARI_01346 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 266
Score = 62.2 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYSAIARHPRYHTIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE QS + +NA+FS ++++ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDQSTNCGENARFSCALLRQAKENINTAIVVQDPTMQRRTMATFRR 165
>gi|260802380|ref|XP_002596070.1| hypothetical protein BRAFLDRAFT_118064 [Branchiostoma floridae]
gi|229281324|gb|EEN52082.1| hypothetical protein BRAFLDRAFT_118064 [Branchiostoma floridae]
Length = 321
Score = 62.2 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 67/186 (36%), Gaps = 30/186 (16%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L RK + F+L F+ + ILL+ + + ++I++LG
Sbjct: 76 LSNFFRKQVLLIRFVLQFAHDMEKLRNLILLREFMARMGEQVSEEELS---DVILVLGCH 132
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAES 131
T + RL+ ++ SG E+
Sbjct: 133 DTRVAE-----------------YAARLWLDGWAEY----LLFSGNLGHFTKGVWDRPEA 171
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQ 189
++++ + GV D I E + +T +N +FS +++ + K ++ILV Y +R+
Sbjct: 172 EIFHDIAVSMGVPDDKILREPMATNTGENIKFSHRVLRQHKVKANSVILVQMPYMERRTY 231
Query: 190 LYFQHF 195
F
Sbjct: 232 ATFVKQ 237
>gi|294675706|ref|YP_003576321.1| hypothetical protein RCAP_rcc00149 [Rhodobacter capsulatus SB 1003]
gi|294474526|gb|ADE83914.1| protein of unknown function DUF218 [Rhodobacter capsulatus SB 1003]
Length = 187
Score = 62.2 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+ LY+S T++ISG G AE Y + L +GV + LE + +T +
Sbjct: 40 AIALYRSGLTR----TLLISGAGTAVDGSAEWSFYRDHALRAGVAESALLLEKNARNTAE 95
Query: 160 NAQFSSSMIKN----MQGKNIILVSSAYHLKRSQLYFQH 194
NA F +++I + +++ + + +H++R+ + +
Sbjct: 96 NAAFGAALIGTELGWAKIRSLAVCAKPFHMRRALMTLRR 134
>gi|254227972|ref|ZP_04921402.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262396046|ref|YP_003287899.1| hypothetical protein VEA_000748 [Vibrio sp. Ex25]
gi|151939468|gb|EDN58296.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262339640|gb|ACY53434.1| hypothetical protein VEA_000748 [Vibrio sp. Ex25]
Length = 280
Score = 62.2 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
N++++LG ++ + + ++ S + ++ + II GG Q
Sbjct: 4 DNVVIVLG--KRLVNSRLTVEGVTRVEALSNVIASL--------PTERTAIIFCGGLTQG 53
Query: 126 HGLAESIVYNNKLLESG------VERDDIKLETQSLDTFQNAQFSSSMIKNMQ------- 172
++E+ + + LE +SL+TFQN +++S ++ +
Sbjct: 54 QRISEADAMYSYFKSLNAAAVHPFPEHQVLLENRSLNTFQNMRYASRILCDSGLFQLWSA 113
Query: 173 -GKNIILVSSAYHLKR 187
+ L+S+ YHL+R
Sbjct: 114 RPVEVTLLSNDYHLER 129
>gi|85106245|ref|XP_962124.1| hypothetical protein NCU07270 [Neurospora crassa OR74A]
gi|28923720|gb|EAA32888.1| predicted protein [Neurospora crassa OR74A]
Length = 398
Score = 62.2 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLK 186
+E+ ++ + L GV I +E QS +T +N +F+ ++++ K ++LV Y +
Sbjct: 233 SEATIFASIALSMGVPPSAILIEEQSTNTGENVRFTHALLEKRGIKVSEVLLVQKPYMER 292
Query: 187 RSQLYFQHF 195
R+ F
Sbjct: 293 RTWGTFGRQ 301
>gi|269963912|ref|ZP_06178224.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831399|gb|EEZ85546.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 248
Score = 62.2 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 66/196 (33%), Gaps = 18/196 (9%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+F + L S +++ + LL F+ I ++ Q +
Sbjct: 1 MLFSRIKSKWKLKFSWKRLALVLSISLLGLFVTIIAIDRWVVLQAQEEIFTDYEQVPKHE 60
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
V+LG I + RI + LYK K ++SG +
Sbjct: 61 VA---VVLGTSKYIGKILNTYYTH-------RINAAIELYKQGKVKQ----FLLSGDNA- 105
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E LL++GV + I L+ T + + + + + ++V+ +H
Sbjct: 106 HRSYNEPWTMKRDLLKAGVPEEVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVTQRFH 162
Query: 185 LKRSQLYFQHFGINTK 200
+R+ + I+ +
Sbjct: 163 CERALFIADAYNIDAQ 178
>gi|19551945|ref|NP_599947.1| hypothetical protein NCgl0685 [Corynebacterium glutamicum ATCC
13032]
gi|62389604|ref|YP_225006.1| hypothetical protein cg0821 [Corynebacterium glutamicum ATCC 13032]
gi|21323481|dbj|BAB98108.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
gi|41324939|emb|CAF19420.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC
13032]
Length = 151
Score = 62.2 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 62/171 (36%), Gaps = 27/171 (15%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG+ + SR+ + + + + +++SG
Sbjct: 4 IVVLGSKVVDGQVTGLL--------ASRLEKAIEV----SSLTPEAPVVVSG-------F 44
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ + L GV I E + T +N + + ++ + +V+S +H R+
Sbjct: 45 GEAAAMADYLRARGV--TTIVEEPWATSTNENLENAHALFPDTL--QWTVVTSGFHAWRT 100
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
L+ H GI K + +A + + F L L+ +L R
Sbjct: 101 YLWAWHLGIPIKVVTARTPSAERLGMAMRECFALPHSTLR----VLWRKIR 147
>gi|302529517|ref|ZP_07281859.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302438412|gb|EFL10228.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length = 221
Score = 62.2 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 46/138 (33%), Gaps = 10/138 (7%)
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLE 140
+ I T LY+ I+ +G + E++ Y LE
Sbjct: 34 VGIGLGSHDLGVAAYTAELYQQGCFRQ----IVFTGANAPTTVDRFPRGEAVHYREHALE 89
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHFGIN 198
GV D I +E + +T N S +++ K ++ L+S Y +R+ +
Sbjct: 90 LGVPDDAILVEPTARNTGDNIARSRELLEARGTKVDSVTLISRPYQQRRAYATCRKLWPE 149
Query: 199 TKASCSDYLNAYYSIIPL 216
K C+ I
Sbjct: 150 VKVLCASQPLPLDEYIRS 167
>gi|28898031|ref|NP_797636.1| SanA protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153839279|ref|ZP_01991946.1| SanA protein [Vibrio parahaemolyticus AQ3810]
gi|28806245|dbj|BAC59520.1| SanA protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149747214|gb|EDM58202.1| SanA protein [Vibrio parahaemolyticus AQ3810]
Length = 244
Score = 62.2 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/226 (17%), Positives = 79/226 (34%), Gaps = 28/226 (12%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W L C R +S + LF + ++ LQ + + V+L
Sbjct: 10 WKLKCSWKRIALILS--ISLFGLL-LSVVAIDRWVALQAK-DNIFIDYDQIPQHEVAVVL 65
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G I T+ RI + LYK K ++SG + E
Sbjct: 66 GTSKYIGKTLNTYYTH-------RINAAIELYKQGKVKQ----FLLSGDNA-HRSYNEPW 113
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
LL++GV + I L+ T + + + + + ++V+ +H +R+
Sbjct: 114 TMKRDLLKAGVPEEVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVTQRFHCERALFIA 170
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ I+ + ++ +AN T + ++E + + A+
Sbjct: 171 DAYNIDAQ---------CLAVAGPTANKQKTSMRIRELLARVKAFL 207
>gi|325474935|gb|EGC78121.1| SanA protein [Treponema denticola F0402]
Length = 226
Score = 62.2 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 68/189 (35%), Gaps = 20/189 (10%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + I+KI F+ IG I +L Y +P + V++
Sbjct: 1 MKSKPIKKIALCIIFLFALILIGIVSINIYMLN-----YSKPYIYKNISALPEKYVVIVP 55
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + S RI + +C ++ ++ISG D + G E
Sbjct: 56 GAKVYKNT------VSHVVRDRIEAAV----NCLKNKKAERVLISG-DHGRKGYDEVNRM 104
Query: 135 NNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ + G + + I ++ T++ + + ++ ++V+ A+H R+ +
Sbjct: 105 RIFMQDIYGTDENLIFMDHAGFSTYETMYRAREI---FCIEDAVVVTQAFHTARAVYIGR 161
Query: 194 HFGINTKAS 202
G++ A
Sbjct: 162 KLGLDVIAY 170
>gi|306837606|ref|ZP_07470477.1| Hypothetical protein BROD_0407 [Brucella sp. NF 2653]
gi|306407313|gb|EFM63521.1| Hypothetical protein BROD_0407 [Brucella sp. NF 2653]
Length = 177
Score = 62.2 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 51/150 (34%), Gaps = 31/150 (20%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P + IV+L G SR+ + L K + ++I
Sbjct: 3 PPVLSEPAEAIVVLTGG------------------QSRVKAGINLLKEKRGK----RLLI 40
Query: 119 SGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
SG P + L + + L ++ D +L+T NA S I+ +
Sbjct: 41 SGVHPSTNEEALQRATHADKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRV 95
Query: 177 ILVSSAYHLKRSQLYF--QHFGINTKASCS 204
I+V++ YH+ RS L + +
Sbjct: 96 IVVTNNYHIPRSILEMSSRMKDVEFIPYPV 125
>gi|27368018|ref|NP_763545.1| hypothetical protein VV2_1678 [Vibrio vulnificus CMCP6]
gi|27359591|gb|AAO08535.1| hypothetical protein VV2_1678 [Vibrio vulnificus CMCP6]
Length = 285
Score = 61.8 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 44/131 (33%), Gaps = 21/131 (16%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+++LG P + SR+ + S K I GG Q
Sbjct: 7 VIVLGKRLFKNALTP--------EGVSRVDALVDAMASGKI-EPGSRIAFCGGITQGQTR 57
Query: 129 AESIVYNNKLLE------SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ------GKNI 176
+E+I + + +I LE +S T +N S ++ +
Sbjct: 58 SEAIAMFDYFQQRCHANNLTFSAQNILLEERSTSTVENIFEVSRLLIQSGQCSTGSVLKV 117
Query: 177 ILVSSAYHLKR 187
VS+ YHLKR
Sbjct: 118 TFVSNDYHLKR 128
>gi|167534844|ref|XP_001749097.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772521|gb|EDQ86172.1| predicted protein [Monosiga brevicollis MX1]
Length = 197
Score = 61.8 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 37/97 (38%), Gaps = 6/97 (6%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQ 153
I+ +GG E+ ++ V D I +ETQ
Sbjct: 10 TRVAEYAAQLWHQQKAPYILFTGGVGFLTEGVFTQPEAELFAQIAKAHDVPDDAILIETQ 69
Query: 154 SLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRS 188
S ++ +N + S+++++ + + IL+ + +R+
Sbjct: 70 SSNSGENCRNSAALLRERGLEVNSCILLQKPFMERRA 106
>gi|153824499|ref|ZP_01977166.1| hypothetical protein A5A_1366 [Vibrio cholerae MZO-2]
gi|149742053|gb|EDM56082.1| hypothetical protein A5A_1366 [Vibrio cholerae MZO-2]
Length = 317
Score = 61.8 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 51/132 (38%), Gaps = 22/132 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I V+LG + + + SR+ + + + ++ GG
Sbjct: 7 IYVVLG--------KRLNANQLTLEGKSRVDGLISALR--CHENTAARVVFCGGITLGQT 56
Query: 128 LAESIVYNNKLLE------SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ----GKNII 177
++E+ + + + D+ LE +S T +N + + ++ G+ ++
Sbjct: 57 VSEAKRMHEYFEQRRQQLGLSFPQIDVLLEQESTSTVENIEHVAQVLLESGVVQRGETLV 116
Query: 178 --LVSSAYHLKR 187
LVS+ YHLKR
Sbjct: 117 LTLVSNDYHLKR 128
>gi|290959775|ref|YP_003490957.1| hypothetical protein SCAB_53771 [Streptomyces scabiei 87.22]
gi|260649301|emb|CBG72416.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 183
Score = 61.8 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
T L+ ++ T S + E+ Y ++ +E GV I +E + +
Sbjct: 2 ADATAELFHRGMAPAVLFTGATSRTTRDRMPRGEAEHYRDRAVELGVPASVILVEPNARN 61
Query: 157 TFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
T +N +FS +++ + + + +LVS Y +R+ +
Sbjct: 62 TGENIRFSRALLEARRIPVSSALLVSKPYEERRAYATARKL 102
>gi|194334031|ref|YP_002015891.1| hypothetical protein Paes_1216 [Prosthecochloris aestuarii DSM 271]
gi|194311849|gb|ACF46244.1| protein of unknown function DUF218 [Prosthecochloris aestuarii DSM
271]
Length = 196
Score = 61.8 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 62/172 (36%), Gaps = 35/172 (20%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + S F+ F+G G I + P SP+ ++I++LG
Sbjct: 4 FLKKTLALLATSAFLTAMIFLGLGYIVSW-----------PAASPE---KADVIIVLGG- 48
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
R+ + LY + ++++G D + + +
Sbjct: 49 ----------------DDGLRVSKGAELYHA----GFADDLLLTGLDSRYYRPGKLNWRE 88
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
KL+ G+ + I ++ S T++ A + S + + +++S H+ R
Sbjct: 89 RKLISLGIPGEAIHVDIVSTSTWEEAANTLSAMNKNGWQRALVISDPPHMLR 140
>gi|332882613|ref|ZP_08450225.1| protein SanA [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679413|gb|EGJ52398.1| protein SanA [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 212
Score = 61.8 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 18/160 (11%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + +P+ RI ++LY++ K I++SG + + + E
Sbjct: 56 GLLLGTNPYLKNGQPNKYFLYRIEAAVQLYEAKKIQY----ILVSGDNHR-NDYNEPEEM 110
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L++ GV +I L+ T + + + + +++S +H +R+ QH
Sbjct: 111 KKALMQRGVPEANIILDYAGFRTLDSVVRAKKV---FGKERFLIISQRFHNQRALYLAQH 167
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I + + AYY + ++EY+
Sbjct: 168 HHIEAVGFNAQDVTAYYGLKTR----------VREYLARF 197
>gi|163844017|ref|YP_001628421.1| hypothetical protein BSUIS_A1836 [Brucella suis ATCC 23445]
gi|163674740|gb|ABY38851.1| protein of unknown function DUF218 [Brucella suis ATCC 23445]
Length = 177
Score = 61.8 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 51/150 (34%), Gaps = 31/150 (20%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P + IV+L G SR+ + L K + ++I
Sbjct: 3 PPVLSEPAEAIVVLTGG------------------QSRVKAGINLLKEKRGK----RLLI 40
Query: 119 SGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
SG P + L + + L ++ D +L+T NA S I+ +
Sbjct: 41 SGVHPSTNEEALQRATHADKSLFACCIDLDR-----TALNTVGNAAESERWIRANNYHRV 95
Query: 177 ILVSSAYHLKRSQLYF--QHFGINTKASCS 204
I+V++ YH+ RS L + +
Sbjct: 96 IVVTNNYHIPRSILEMSSRMKDVEFIPYPV 125
>gi|254229583|ref|ZP_04922995.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|151937866|gb|EDN56712.1| conserved hypothetical protein [Vibrio sp. Ex25]
Length = 244
Score = 61.8 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/235 (14%), Positives = 80/235 (34%), Gaps = 29/235 (12%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHL-QFSYQRPLLSPQWK 63
+F + L S +++ + +L + I ++ + + PQ +
Sbjct: 1 MLFSRIRSKWKLKFSWKRLALILSISVLSLLVSVIAIDRWVVLQAKESIFTEYEPIPQHE 60
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
V+LG I + RI + LY K ++SG +
Sbjct: 61 VA----VVLGTSKYIGKILNTYYTH-------RINAAIELYNQGKVKQ----FLLSGDNA 105
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E LL++GV + I L+ T + + + + + ++V+ +
Sbjct: 106 -HRSYNEPWTMKRDLLKAGVPEEVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVTQRF 161
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H +R+ + I+ + ++ + N T + ++E + + A+
Sbjct: 162 HCERALFIADAYNIDAQ---------CLAVAGPTTNKQKTSMRIRELLARVKAFL 207
>gi|154243978|ref|YP_001414936.1| hypothetical protein Xaut_0020 [Xanthobacter autotrophicus Py2]
gi|154158063|gb|ABS65279.1| protein of unknown function DUF218 [Xanthobacter autotrophicus Py2]
Length = 300
Score = 61.8 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 77/221 (34%), Gaps = 35/221 (15%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R + ++ + + L F+ Q P K + IV+L G
Sbjct: 57 RPRSLLRRLVVSLVLLTGVAGVAVAAGFLAFTAQIAAREPAAVKPADAIVVLTGG----- 111
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAESIVYNNKL 138
SRI + + L + ++I+G +P + ++ L
Sbjct: 112 -------------PSRIVDAVGLLADGRGR----RLLITGVNPTTSMDEMRRALPDGEHL 154
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--G 196
L ++ ++L+T NA ++ + + +++++V+S++H+ R+ +
Sbjct: 155 LGCCIDLGH-----KALNTRGNALEAAEWAREKRFRSLVVVTSSWHMPRAMMELGRALPD 209
Query: 197 INTKASC-SDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ + S L +KEY+ ++A
Sbjct: 210 VELVSYPVVTTRTQPESWWSDPGTLKL---LVKEYLKFIMA 247
>gi|161619913|ref|YP_001593800.1| hypothetical protein BCAN_A2041 [Brucella canis ATCC 23365]
gi|225853431|ref|YP_002733664.1| hypothetical protein BMEA_A2054 [Brucella melitensis ATCC 23457]
gi|254690133|ref|ZP_05153387.1| hypothetical protein Babob68_08186 [Brucella abortus bv. 6 str.
870]
gi|254694623|ref|ZP_05156451.1| hypothetical protein Babob3T_08184 [Brucella abortus bv. 3 str.
Tulya]
gi|254696248|ref|ZP_05158076.1| hypothetical protein Babob28_00674 [Brucella abortus bv. 2 str.
86/8/59]
gi|254700633|ref|ZP_05162461.1| hypothetical protein Bsuib55_07228 [Brucella suis bv. 5 str. 513]
gi|254707480|ref|ZP_05169308.1| hypothetical protein BpinM_11037 [Brucella pinnipedialis
M163/99/10]
gi|254708978|ref|ZP_05170789.1| hypothetical protein BpinB_01690 [Brucella pinnipedialis B2/94]
gi|254713593|ref|ZP_05175404.1| hypothetical protein BcetM6_09616 [Brucella ceti M644/93/1]
gi|254716053|ref|ZP_05177864.1| hypothetical protein BcetM_06394 [Brucella ceti M13/05/1]
gi|254731166|ref|ZP_05189744.1| hypothetical protein Babob42_08216 [Brucella abortus bv. 4 str.
292]
gi|256030505|ref|ZP_05444119.1| hypothetical protein BpinM2_07627 [Brucella pinnipedialis
M292/94/1]
gi|256045596|ref|ZP_05448476.1| hypothetical protein Bmelb1R_13928 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256158491|ref|ZP_05456389.1| hypothetical protein BcetM4_06532 [Brucella ceti M490/95/1]
gi|256253910|ref|ZP_05459446.1| hypothetical protein BcetB_06374 [Brucella ceti B1/94]
gi|256258387|ref|ZP_05463923.1| hypothetical protein Babob9C_13798 [Brucella abortus bv. 9 str.
C68]
gi|161336724|gb|ABX63029.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
gi|225641796|gb|ACO01710.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
gi|326409995|gb|ADZ67060.1| conserved hypothetical protein [Brucella melitensis M28]
Length = 177
Score = 61.8 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 51/150 (34%), Gaps = 31/150 (20%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P + IV+L G SR+ + L K + ++I
Sbjct: 3 PPVLSEPAEAIVVLTGG------------------QSRVKAGINLLKEKRGK----RLLI 40
Query: 119 SGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
SG P + L + + L ++ D +L+T NA S I+ +
Sbjct: 41 SGVHPSTNEEALQRATHADKSLFACCIDLDR-----TALNTVGNAAESERWIRANDYHRV 95
Query: 177 ILVSSAYHLKRSQLYF--QHFGINTKASCS 204
I+V++ YH+ RS L + +
Sbjct: 96 IVVTNNYHIPRSILEMSSRMKDVEFIPYPV 125
>gi|56750108|ref|YP_170809.1| hypothetical protein syc0099_d [Synechococcus elongatus PCC 6301]
gi|56685067|dbj|BAD78289.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 188
Score = 61.8 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 45/117 (38%), Gaps = 13/117 (11%)
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQN 160
+ Q I +S G + Y + ++GV R + L+ Q+ DT N
Sbjct: 43 QFAAELAQTHPDLPIWVSSGSNPE--------YAEWVFGQAGVPRSRLHLDYQATDTLSN 94
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQ----LYFQHFGINTKASCSDYLNAYYSI 213
+ + +++ LV+S YH++R+ + F GI + + A S
Sbjct: 95 FTSLADRFQQQGIQHVYLVTSDYHMRRALVIANIVFASRGITFEPVPVPFDRASESW 151
>gi|304320133|ref|YP_003853776.1| hypothetical protein PB2503_02792 [Parvularcula bermudensis
HTCC2503]
gi|303299036|gb|ADM08635.1| hypothetical protein PB2503_02792 [Parvularcula bermudensis
HTCC2503]
Length = 194
Score = 61.8 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 43/227 (18%), Positives = 78/227 (34%), Gaps = 43/227 (18%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+R + ++ M L G+ + L + Q L S +++L G
Sbjct: 1 MRFVLKIAALMGLLCAAGFFVFVAAL--PRSSNEQAALRSLSADARTGMVILTGG----- 53
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA-ESIVYNNKL 138
+ RI + L+ ++ISG P E + + L
Sbjct: 54 -------------AGRRIQHGLDLFAQ----GYGDRVLISGTHPLVDKEDLEGLGVRDSL 96
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG-- 196
V+ L ++ T NA + + I+LV+S +HL R+ L +
Sbjct: 97 -HCCVD-----LGPRARTTIGNALEARDWARRRGYDTILLVTSDFHLPRALLELEAVAPE 150
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALK----EYIGILIAYYR 239
+ D +A SAN+ + A + EYI ++A+ R
Sbjct: 151 LTVIGIAVDTRSAP------SANWMRSPSAWRVLAEEYIKYILAWTR 191
>gi|121602686|ref|YP_988436.1| hypothetical protein BARBAKC583_0098 [Bartonella bacilliformis
KC583]
gi|120614863|gb|ABM45464.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 202
Score = 61.8 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 64/184 (34%), Gaps = 46/184 (25%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
C + LF +G + I + ++ Y P + I++L G
Sbjct: 17 CLLSLFLIMGTHFV--IFSEKVEQLYP-----PVSLSKADAIIVLTGGER---------- 59
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
RI +RL K + ++ISG + H L ++
Sbjct: 60 --------RIETGLRLLKQ----GLGSRLLISGVNATFHP-------KRLLRNMHIDPQ- 99
Query: 148 IKLET------QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINT 199
E Q+ +T NA+ S+ IK K + +V+ YH+ RS L ++ IN
Sbjct: 100 -LFECCVDLGYQATNTKSNAEESAVWIKKHHYKTLYIVTHDYHIARSLLELRYLMPDINF 158
Query: 200 KASC 203
A
Sbjct: 159 IAYP 162
>gi|46206241|ref|ZP_00047534.2| COG1434: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 178
Score = 61.8 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 60/156 (38%), Gaps = 20/156 (12%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV----YNNKLLESGVERDDI 148
RI + + L + ++ISG + E I+ + + V+
Sbjct: 4 GAQRIGDAIDLLAGGRGK----RLLISG--VNERTTREEIIRLNPAQEQWISCCVD---- 53
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH---FGINTKASCSD 205
L+ ++ +T NA + ++ + + +V+S+YH+ R+ + +H G
Sbjct: 54 -LDYRARNTIGNAIETRRWMRRHRFGTVAVVTSSYHMPRTLVELRHALNAGETVIPYPV- 111
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ I A+ T L EY+ L+A+ R
Sbjct: 112 -VTEGLEIERWWADPAATRLLGAEYLKFLVAWLRTR 146
>gi|168010458|ref|XP_001757921.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690798|gb|EDQ77163.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 352
Score = 61.8 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 22/140 (15%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKS----------CKQHSMHC 114
+ I++L G +P + + R+ + ++L K
Sbjct: 114 PVDAILVLAGG-----QLPGGGVPVWVER--RLDKALQLQKLSGHECCIVCLGNGTPHRP 166
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQG 173
++ S G + + L+ G + E S DT N F+ + +
Sbjct: 167 PLLTSEGFVIHESTSCAE----YLISKGAPVRVLIKECSSYDTIGNGFFALTQHAIPQRW 222
Query: 174 KNIILVSSAYHLKRSQLYFQ 193
K + +V+SA+H+ RSQ F+
Sbjct: 223 KKMAIVTSAFHMPRSQAIFE 242
>gi|229513224|ref|ZP_04402689.1| hypothetical protein VCB_000869 [Vibrio cholerae TMA 21]
gi|229349634|gb|EEO14589.1| hypothetical protein VCB_000869 [Vibrio cholerae TMA 21]
Length = 317
Score = 61.8 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 22/132 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I V+LG + + + SR+ + + + ++ GG
Sbjct: 7 IYVVLG--------KRLNANQLTLEGKSRVDGLISELR--CHENTAARVVFCGGITLGQT 56
Query: 128 LAESIVYNNKLLE------SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN------ 175
++E+ + + + D+ LE +S T +N + + ++
Sbjct: 57 VSEAKRMHEYFEQRRQQLGLSFPQIDVLLEQESTSTVENIEHVAQVLLESGVVQRGETLA 116
Query: 176 IILVSSAYHLKR 187
+ LVS+ YHLKR
Sbjct: 117 LTLVSNDYHLKR 128
>gi|148927289|ref|ZP_01810857.1| protein of unknown function DUF218 [candidate division TM7
genomosp. GTL1]
gi|147887295|gb|EDK72751.1| protein of unknown function DUF218 [candidate division TM7
genomosp. GTL1]
Length = 223
Score = 61.8 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 98 FETMRLYKSCKQ-HSMHCTIIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKLET 152
+ +Y + ++ISGG + E+ ++ + + GV + + LET
Sbjct: 41 DRRVAVYSAELFLKGYGNYLVISGGFGRISKDRFHKTEAELFADIAIGMGVPPEKVVLET 100
Query: 153 QSLDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQHF 195
++ +T +N +F+ +++ + ++ K+++LV Y +R+ F+
Sbjct: 101 KASNTGENIRFTYNLLMQRGLRPKSLLLVHKPYMERRTLATFKKQ 145
>gi|255535094|ref|YP_003095465.1| SanA protein [Flavobacteriaceae bacterium 3519-10]
gi|255341290|gb|ACU07403.1| SanA protein [Flavobacteriaceae bacterium 3519-10]
Length = 206
Score = 61.4 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 79/231 (34%), Gaps = 35/231 (15%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
L +R F + M+L + + + + R ++LG
Sbjct: 2 KKLLDILRTFFTLVEIMVLLMVLANIWVYAL-------TNGRTFTRISKIPPRETALVLG 54
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
P + + R P F + R+ LY H II+SG + G E
Sbjct: 55 ----TSPRMKSGRSNPYFTA--RMDAAALLYH----HGKIKRIIVSG--EKSPGYDEPYA 102
Query: 134 YNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
N L+ + GV + I + + T + + K N+I+VS +H R+ Y
Sbjct: 103 MKNYLIYQEGVPENIITEDPKGFKTQASISNCKKIYKQ---SNVIIVSQGFHNLRALFYA 159
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI---LIAYYRG 240
++ +N + + A S + +E++ ++ Y G
Sbjct: 160 RNNDMNALGFDAQDVLANRSYYRNQS---------REFLARVLAVVYYIFG 201
>gi|197265831|ref|ZP_03165905.1| SanA protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|205357549|ref|ZP_02571321.2| SanA protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|197244086|gb|EDY26706.1| SanA protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|205331121|gb|EDZ17885.1| SanA protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|321225905|gb|EFX50959.1| SanA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
Length = 210
Score = 61.4 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 23/187 (12%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
M+CF+L+ + + L+ + + ++ ++LG P
Sbjct: 1 MACFLLVAAGVA-LFYSNWLIVNASQHLTWNDIQTVPARNVG--LVLGA-------KPGN 50
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R RI LY + K +++SG + +K E L+ GV
Sbjct: 51 RY-----FTRRINTAAALYHAGKVKW----LLVSGDNGKKE-YDEPSAMQQALMAKGVPE 100
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I + T + + + I ++S A+H +R+ Q +GI+ +
Sbjct: 101 AAIFCDYAGFSTLDSVVRARKVFGE---SRITIISQAFHNQRAIWLAQQYGIDAIGVNAP 157
Query: 206 YLNAYYS 212
LN +
Sbjct: 158 DLNKRHG 164
>gi|159029637|emb|CAO87715.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 227
Score = 61.4 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 57/175 (32%), Gaps = 39/175 (22%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
+ + +L+F FI + + ++ S +K + I++LG
Sbjct: 13 RNWQKWLKLTLILVFGFIILNLATNLAIR----------WSINQQKPVDAILVLGG---- 58
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
S R L K + I+IS G
Sbjct: 59 --------------SIRREIYVANLAKQY----PNIPILISQGSKDP-------CILLLF 93
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ + ++ LE + TF N F+ ++K + +V+S HL R++ +
Sbjct: 94 ERAKAPKTNVWLEKCANSTFGNFFFAVPILKQWGVHKVKVVTSPTHLPRAKWLAE 148
>gi|297625459|ref|YP_003687222.1| hypothetical protein PFREUD_02530 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296921224|emb|CBL55774.1| Hypothetical secreted protein [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 223
Score = 61.4 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 62/174 (35%), Gaps = 23/174 (13%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ + + ++ ++LG G PS R+ LY S K +
Sbjct: 39 VFTAHSAPNRDVALVLGAGLNAD-------GSPSLYLAGRLRAAYDLYVSQKV-----KV 86
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
I+ GD + +E + L GV D+ + LDT+ + + ++ ++
Sbjct: 87 ILVSGDNRTVTYSEPGAMRSYLRLLGVPDRDVVADYAGLDTYDSCYRARNI---FGVNSV 143
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSD--------YLNAYYSIIPLSANFYL 222
+V +YHL R+ + GI+ SD + IP + F
Sbjct: 144 TVVGQSYHLDRAVATCRSIGIDDTIGVSDEQSHDTSTWRTGEMREIPANVKFVW 197
>gi|323188468|gb|EFZ73753.1| sanA [Escherichia coli RN587/1]
Length = 230
Score = 61.4 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 68/193 (35%), Gaps = 23/193 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ + C +LL + I ++ + ++ ++ +LLG
Sbjct: 16 RRTLKIGCLLLLIAG-ATLFIADRVMVNASQQLTWSDVNAVPARNVG--LLLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 -RPGNRY-----FTRRIDTAAELYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 116 KGVPAKAIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDAI 172
Query: 201 ASCSDYLNAYYSI 213
+ LN +
Sbjct: 173 GFNAPDLNMKHGF 185
>gi|224001440|ref|XP_002290392.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973814|gb|EED92144.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 327
Score = 61.4 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 63/154 (40%), Gaps = 14/154 (9%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
++ P + + I+LLG G + P P + ++ +++ ++ + M
Sbjct: 19 FKDPASYTSFLDSLDAILLLGGGVPLSPNEPPVYVQRRCDVVAQLLNMVKQSVNMHDGVM 78
Query: 113 HCTIII--SGGDP--------QKHGLAESIVYNNKLL---ESGVERDDIKLETQSLDTFQ 159
++ S G L E+ LL + ++ + + +ET S DT
Sbjct: 79 KLPSVVCLSAGTAHLPQFITLDGLPLWEATASAAYLLNHPQYPLQEELVFVETTSYDTIS 138
Query: 160 NAQFSS-SMIKNMQGKNIILVSSAYHLKRSQLYF 192
NA F+ S + +++V++ +H+ RS+ F
Sbjct: 139 NAFFARTSFTDVTGWRRLLVVTNEFHIHRSKAIF 172
>gi|312116073|ref|YP_004013669.1| hypothetical protein Rvan_3387 [Rhodomicrobium vannielii ATCC
17100]
gi|311221202|gb|ADP72570.1| protein of unknown function DUF218 [Rhodomicrobium vannielii ATCC
17100]
Length = 197
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 61/183 (33%), Gaps = 29/183 (15%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
F+Y ++ KD + IV L T A + + +R RL S
Sbjct: 7 FAYSVSIMPSTRLKDADAIVAL----TGDEERIAAAVRLLSEGKAR-----RLLISGVHK 57
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNK-LLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ I+S L S + L V+ + +T NA +++ ++
Sbjct: 58 TTRAPQIMS--------LTTSRGSRSWSLFSCCVD------LDNAHNTEANAAETTNWVR 103
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
++II+V+S YH+ R+ + + S + +
Sbjct: 104 KRGYRSIIVVTSTYHMPRALIELHQAMRDVELVPYPVRAPRLDERWWRDSRTAW---VLW 160
Query: 228 KEY 230
KEY
Sbjct: 161 KEY 163
>gi|92116288|ref|YP_576017.1| hypothetical protein Nham_0669 [Nitrobacter hamburgensis X14]
gi|91799182|gb|ABE61557.1| protein of unknown function DUF218 [Nitrobacter hamburgensis X14]
Length = 238
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 62/167 (37%), Gaps = 11/167 (6%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK--HGLAESI 132
G P A I SRI + + L ++ISG P ++ S+
Sbjct: 52 GVETKPASNADGIVVLTGGSSRISDAVELLAG----GYGKRLLISGVHPTNGVSDISRSL 107
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
N +LL V+ D +++T NA + + +++I+V+S YH+ R+ +
Sbjct: 108 PDNQRLLTCCVDLDR-----SAVNTRSNASETRRWVDEQGFRSLIVVTSNYHMPRAIVEL 162
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + + + P + L L EY L A R
Sbjct: 163 SYAMPDITLIPFAVIGDKWREEPWWTSGATLRLLLSEYAKYLAAEVR 209
>gi|62181739|ref|YP_218156.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|62129372|gb|AAX67075.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|322716225|gb|EFZ07796.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 230
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 67/192 (34%), Gaps = 23/192 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ ++CF+L+ + + L+ + + ++ ++LG
Sbjct: 16 RRALTVACFLLVAAAVA-LFYSNWLIVNASQHLTWNDIQTVPARNVG--LVLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K E L+
Sbjct: 67 -KPGNRY-----FTRRINTAAALYHAGKVKW----LLVSGDNGKKE-YDEPSAIQQALIA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + + + I ++S A+H +R+ Q +GI+
Sbjct: 116 KGVPEAAIFCDYAGFSTLDSVVRARKVFGEN---RITIISQAFHNQRAIWLAQQYGIDAI 172
Query: 201 ASCSDYLNAYYS 212
+ LN +
Sbjct: 173 GVNAPDLNKRHG 184
>gi|315221559|ref|ZP_07863479.1| conserved hypothetical protein [Streptococcus anginosus F0211]
gi|315189393|gb|EFU23088.1| conserved hypothetical protein [Streptococcus anginosus F0211]
Length = 218
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 10/105 (9%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKLET 152
L+ K + C SGG + E+ Y +E+GV +D I +E
Sbjct: 39 ANHAASLFLQGKAPFLVC----SGGYGKITKSLWNNTEAETYAQICIENGVPKDKILIEN 94
Query: 153 QSLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHF 195
+S ++ +N F+ ++++ K +V Y +R+ +
Sbjct: 95 KSTNSGENFNFTKKLLESRNIKVSTGTIVCKNYLSRRALATAKKQ 139
>gi|218680941|ref|ZP_03528838.1| hypothetical protein RetlC8_19678 [Rhizobium etli CIAT 894]
Length = 216
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 72/211 (34%), Gaps = 41/211 (19%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
F + + L+F+ L P + + IV+L G
Sbjct: 16 GFACVLTMALVFGGFLRFADSVTTLKPPAEPKADAIVVLTGG------------------ 57
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN---KLLESGVERDDIKL 150
Y RI + + L + ++ISG + L V+
Sbjct: 58 YQRIDQAVELLQ----KGAGKRLLISG-VHPTTTPRQIRRMTQGSADLFSCCVDIGH--- 109
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASC---SD 205
++DT NA+ +S+ I +++I+V++ YH+ RS + I SD
Sbjct: 110 --DAIDTIGNAEEASNWIHANGYRSVIVVTNNYHMPRSLAELSYVDPDIEFIPYPVVNSD 167
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ P + + L EY+ +L+A
Sbjct: 168 LKTRNWFTDPNA-----MRVMLAEYVKVLLA 193
>gi|49476199|ref|YP_034240.1| hypothetical protein BH15440 [Bartonella henselae str. Houston-1]
gi|49239007|emb|CAF28307.1| hypothetical protein BH15440 [Bartonella henselae str. Houston-1]
Length = 230
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 63/194 (32%), Gaps = 40/194 (20%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L + F ++LF G+ + L P + I++L G
Sbjct: 40 LFRYFPPTAFFLLMIVLFFCAGFVVFSEK---------TEQLTPPSPLPKADAIIVLTGG 90
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH--GLAESIV 133
+RI + L + + ++ISG + S
Sbjct: 91 E------------------NRIETGLDLLQQ----GLGSRLLISGVNTTTTLKRFMHSTH 128
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+L V+ ++++T NA+ S+ IK K + +V+ YH+ RS +
Sbjct: 129 ITPQLFACCVDIGH-----KAINTKGNAEESAVWIKKHHYKTVYIVTHDYHMWRSMRELK 183
Query: 194 HF--GINTKASCSD 205
+ IN A
Sbjct: 184 YLMPDINFIAYPVK 197
>gi|195873578|ref|ZP_02697480.2| SanA protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|200387035|ref|ZP_03213647.1| SanA protein [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204928020|ref|ZP_03219220.1| SanA protein [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205358504|ref|ZP_03224049.1| SanA protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205359734|ref|ZP_02831710.2| SanA protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205360583|ref|ZP_02684746.2| SanA protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|195633348|gb|EDX51762.1| SanA protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|199604133|gb|EDZ02678.1| SanA protein [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204322342|gb|EDZ07539.1| SanA protein [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205333860|gb|EDZ20624.1| SanA protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205343456|gb|EDZ30220.1| SanA protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205348359|gb|EDZ34990.1| SanA protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
Length = 210
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 23/187 (12%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
M+CF+L+ + + L+ + + ++ ++LG P
Sbjct: 1 MACFLLVAAGVA-LFYSNWLIVNASQHLTWNDIQTVPARNVG--LVLGA-------KPGN 50
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R RI LY + K +++SG + +K E L+ GV
Sbjct: 51 RY-----FTRRINTAAALYHAGKVKW----LLVSGDNGKKE-YDEPSAMQQALIAKGVPE 100
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I + T + + + I ++S A+H +R+ Q +GI+ +
Sbjct: 101 AAIFCDYAGFSTLDSVVRARKVFGE---SRITIISQAFHNQRAIWLAQQYGIDAIGVNAP 157
Query: 206 YLNAYYS 212
LN +
Sbjct: 158 DLNKRHG 164
>gi|186477759|ref|YP_001859229.1| hypothetical protein Bphy_3013 [Burkholderia phymatum STM815]
gi|184194218|gb|ACC72183.1| protein of unknown function DUF218 [Burkholderia phymatum STM815]
Length = 198
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 59/171 (34%), Gaps = 19/171 (11%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ +++L + + ++ +R+ + + T+++ G
Sbjct: 10 ARYDAVIVL-------ANLMDAEGNLNDETRARVDLGIE----AIETGRAPTLVMCGWAY 58
Query: 124 Q-KHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSS-MIKNMQGKNIILVS 180
+ + + +E V+ + ET S DT +A F+ S + G I++ +
Sbjct: 59 REDSDICIADAMRRYAVEQRNVDASRVIAETTSRDTVGDAVFTRSNLAATFGGSRILVAT 118
Query: 181 SAYHLKRSQLYFQ-----HFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
S YH R+ F F I+ + A + S + + A
Sbjct: 119 SRYHAARTLEIFTFVYGPSFHIDVDGAGGPATAAQLTSEARSLDAFRATFA 169
>gi|213865184|ref|ZP_03387303.1| hypothetical protein SentesT_35716 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 169
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 9/133 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K E L+ GV I +
Sbjct: 15 RINTAAALYHAGKVKW----LLVSGDNGKKE-YDEPSAMQQALIAKGVPEAAIFCDYAGF 69
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS-II 214
T + + + I ++S A+H +R+ Q +GI+ + LN +
Sbjct: 70 STLDSVVRARKVFGE---SRITIISQAFHNQRAIWLAQQYGIDAIGVNAPDLNKRHGTYT 126
Query: 215 PLSANFYLTELAL 227
L L
Sbjct: 127 RLREKLARVSAVL 139
>gi|261758934|ref|ZP_06002643.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
gi|261738918|gb|EEY26914.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
Length = 269
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 72/198 (36%), Gaps = 41/198 (20%)
Query: 13 WHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
W ++ + +R++ + F+ + +F+G ++ + + +Q P + IV
Sbjct: 55 WSVMMRILRRLQPVSIILFLAVIAFLGGFLVFSEKVTGMQ--------PPVLSEPAEAIV 106
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGL 128
+L G SR+ + L K + ++ISG P + L
Sbjct: 107 VLTGG------------------QSRVKAGINLLKEKRGK----RLLISGVHPSTNEEAL 144
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + L ++ D +L+T N S I+ +I+V++ YH+ RS
Sbjct: 145 QRATHADKSLFACCIDLDR-----TALNTVGNVAESERWIRANDYHRVIVVTNNYHIPRS 199
Query: 189 QLYF--QHFGINTKASCS 204
L + +
Sbjct: 200 ILEMSSRMKDVEFIPYPV 217
>gi|255018888|ref|ZP_05291014.1| hypothetical protein LmonF_16276 [Listeria monocytogenes FSL
F2-515]
Length = 76
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 14/86 (16%)
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
T+S T +N ++S++ ++V+S YH+ R+ + + GI+ +
Sbjct: 1 TKSKRTEENIKYSNA---KFNLGKTVIVTSDYHMYRALMLAKRQGIDASGLPA------- 50
Query: 212 SIIPLSANFYLTELALKEYIGILIAY 237
S F + ++E + I A+
Sbjct: 51 ----TSQTFAKYKGMMREVLSITYAW 72
>gi|319406304|emb|CBI79941.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 226
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 66/179 (36%), Gaps = 35/179 (19%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
L P + I++L G +RI + L + + +
Sbjct: 65 LTPPHPLPKVDAIIVLTGGK------------------NRIETGLELLQ----KKLGSRL 102
Query: 117 IISGGDPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+ISG + H N +L V+ D + +T NA+ S+ I + K
Sbjct: 103 LISGVNTTIHPNKLIRRMNINPRLFACCVDIDH-----HATNTQGNAKESAHWINKHRYK 157
Query: 175 NIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
+ +V+ YH+ RS L F++ IN A N S I + L LAL EY+
Sbjct: 158 TLYIVTHDYHMIRSLLEFKYLMPNINFIAYPIKQ-NVTDSWIKQANQIRL--LAL-EYV 212
>gi|319899424|ref|YP_004159521.1| hypothetical protein BARCL_1288 [Bartonella clarridgeiae 73]
gi|319403392|emb|CBI76960.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 225
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 58/151 (38%), Gaps = 31/151 (20%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
P + + I++L G +RI ++L + +
Sbjct: 64 FTPPHPLQKVDAIIVLTGGK------------------NRIETGLKLL----EKGFGSRL 101
Query: 117 IISGGDPQKHGLAESIVYN--NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+ISG H + N +L ++ + Q+++T NA+ S+ IK + K
Sbjct: 102 LISGVSTTTHPNKLIRMMNINPQLFSCCID-----IGYQAINTQGNAKESADWIKKHRYK 156
Query: 175 NIILVSSAYHLKRSQLYFQHF--GINTKASC 203
+ +V+ YH+ RS L FQ+ IN A
Sbjct: 157 TLYIVTHDYHMMRSLLEFQYLMPNINFIAYP 187
>gi|330467123|ref|YP_004404866.1| hypothetical protein VAB18032_15780 [Verrucosispora maris
AB-18-032]
gi|328810094|gb|AEB44266.1| hypothetical protein VAB18032_15780 [Verrucosispora maris
AB-18-032]
Length = 224
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSL 155
RL+++ + I+ +G + E++ Y +E GV + + +E ++
Sbjct: 53 ATRLFQA----GLFPWIVFTGANAPTTIERFPHGEAVHYREYAVEHGVPAESVLVEPRAT 108
Query: 156 DTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQ 193
+T +N ++S +++ + + K+++++S Y +R+ +
Sbjct: 109 NTAENLEYSRALLAERQIPVKSVLIMSRPYQQRRAYATCR 148
>gi|91975425|ref|YP_568084.1| hypothetical protein RPD_0945 [Rhodopseudomonas palustris BisB5]
gi|91681881|gb|ABE38183.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisB5]
Length = 241
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/215 (15%), Positives = 73/215 (33%), Gaps = 35/215 (16%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++ + L F+ L L+ + +P + + IV+L G+
Sbjct: 19 RRPGRLRAVIVATLALGFVATAAGFVAFLAQLRGAELKP------NRTADGIVVLTGGS- 71
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG--GDPQKHGLAESIVYN 135
SR+ + + L ++ISG ++ S+ +
Sbjct: 72 -----------------SRVSDAVELLA----SGYGKRLLISGVHRTNGASDISRSVPDS 110
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L+ V+ D +++T NA + ++I+V+S YH+ R+ + H
Sbjct: 111 KDWLDCCVDLDR-----SAVNTRSNAAETRRWAHERGFHSLIVVTSNYHMPRAIVEMSHA 165
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+ + + + P + L L EY
Sbjct: 166 MPDVELIPFAVIGDKWRDEPWWTSGATLRLLLSEY 200
>gi|157155538|ref|YP_001462689.1| hypothetical protein EcE24377A_1595 [Escherichia coli E24377A]
gi|193062643|ref|ZP_03043737.1| conserved hypothetical protein [Escherichia coli E22]
gi|193066953|ref|ZP_03047922.1| conserved hypothetical protein [Escherichia coli E110019]
gi|218553939|ref|YP_002386852.1| hypothetical protein ECIAI1_1409 [Escherichia coli IAI1]
gi|260843726|ref|YP_003221504.1| hypothetical protein ECO103_1546 [Escherichia coli O103:H2 str.
12009]
gi|293433798|ref|ZP_06662226.1| ydcF [Escherichia coli B088]
gi|300819709|ref|ZP_07099899.1| putative protein YdcF [Escherichia coli MS 107-1]
gi|300823261|ref|ZP_07103393.1| putative protein YdcF [Escherichia coli MS 119-7]
gi|331667785|ref|ZP_08368649.1| protein YdcF [Escherichia coli TA271]
gi|331677261|ref|ZP_08377943.1| protein YdcF [Escherichia coli H591]
gi|157077568|gb|ABV17276.1| conserved hypothetical protein [Escherichia coli E24377A]
gi|192931765|gb|EDV84365.1| conserved hypothetical protein [Escherichia coli E22]
gi|192959543|gb|EDV89977.1| conserved hypothetical protein [Escherichia coli E110019]
gi|218360707|emb|CAQ98268.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|257758873|dbj|BAI30370.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
gi|291324617|gb|EFE64039.1| ydcF [Escherichia coli B088]
gi|300524225|gb|EFK45294.1| putative protein YdcF [Escherichia coli MS 119-7]
gi|300527729|gb|EFK48791.1| putative protein YdcF [Escherichia coli MS 107-1]
gi|320199421|gb|EFW74012.1| Protein ydcF [Escherichia coli EC4100B]
gi|323163563|gb|EFZ49388.1| hypothetical protein ECE128010_0217 [Escherichia coli E128010]
gi|323185451|gb|EFZ70812.1| hypothetical protein ECOK1357_0813 [Escherichia coli 1357]
gi|331065370|gb|EGI37265.1| protein YdcF [Escherichia coli TA271]
gi|331075112|gb|EGI46425.1| protein YdcF [Escherichia coli H591]
Length = 266
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++K
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLKQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N + +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRMTGDNPD---APRWLSYPGFVPQLGNNADSVIFI 196
Query: 228 KEYIGI 233
+ G+
Sbjct: 197 NQLQGL 202
>gi|183221618|ref|YP_001839614.1| hypothetical protein LEPBI_I2242 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911697|ref|YP_001963252.1| hypothetical protein LBF_2177 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776373|gb|ABZ94674.1| conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167780040|gb|ABZ98338.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 225
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 60/146 (41%), Gaps = 14/146 (9%)
Query: 96 RIFE-TMRLYKSCKQHSMHCTIIISGG----DPQKHGLAESIVYNNKLLESGVERDDIKL 150
RI + + LYK + I+ SGG +E+ + N + + ++ I +
Sbjct: 45 RIAKYAVDLYKQ----GLAKYILFSGGLNFFTKHIFPNSEAEAFANLAISENIPKEFIII 100
Query: 151 ETQSLDTFQNAQFSSSMIK--NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
E +S +T +N QFS ++ N++ +NII + R +L + S +
Sbjct: 101 ENKSSNTGENIQFSKQLLYSLNLKFENIIAIQKPSMTLRIKLALDKQWPDGNFSIASPNY 160
Query: 209 AYYSIIPLSANFYLTELALKEYIGIL 234
+ + N ++ + E +G L
Sbjct: 161 SLFDATHSHINLFM---IINEIVGDL 183
>gi|323498557|ref|ZP_08103550.1| hypothetical protein VISI1226_09799 [Vibrio sinaloensis DSM 21326]
gi|323316446|gb|EGA69464.1| hypothetical protein VISI1226_09799 [Vibrio sinaloensis DSM 21326]
Length = 283
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 17/128 (13%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++I++LG + E + + SR+ S ++ GG
Sbjct: 11 DVIIVLG--------KRLVCDELTAEGRSRVSALPAHLSQFNIEST--VLVFCGGVTGDQ 60
Query: 127 GLAESIVYNNKLLESGVE----RDDIKLETQSLDTFQNAQFSSSMIKNMQGK---NIILV 179
+E+ E I LE S +T +N ++++ + NI V
Sbjct: 61 TQSEAKRMLEYFTAIAPEWLNRPAMILLENTSTNTMENFTNVANILLEKGIRGPVNISFV 120
Query: 180 SSAYHLKR 187
S+ YHL+R
Sbjct: 121 SNDYHLER 128
>gi|194738259|ref|YP_002116179.1| SanA protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197301016|ref|ZP_02662980.2| SanA protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194713761|gb|ACF92982.1| SanA protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197289096|gb|EDY28465.1| SanA protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 210
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 23/187 (12%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
M+CF+L+ + + L+ + + ++ ++LG P
Sbjct: 1 MACFLLVAAGVA-LFYSNWLIVNASQHLTWNDIQTVPARNVG--LVLGA-------KPGN 50
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R RI LY + K +++SG + +K E L+ GV
Sbjct: 51 RY-----FTRRINTAAALYHAGKVKW----LLVSGDNGKKE-YDEPSAMQQALIAKGVPE 100
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I + T + + + I ++S A+H +R+ Q +GI+ +
Sbjct: 101 AAIFCDYAGFSTLDSVVRARKVFGE---SRITIISQAFHNQRAIWLAQQYGIDAIGVNAP 157
Query: 206 YLNAYYS 212
LN +
Sbjct: 158 DLNKRHG 164
>gi|218694955|ref|YP_002402622.1| hypothetical protein EC55989_1545 [Escherichia coli 55989]
gi|218351687|emb|CAU97402.1| conserved hypothetical protein [Escherichia coli 55989]
Length = 266
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++K
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLKQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N + +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRMTGDNPD---APRWLSYPGFVPQLGNNADSVIFI 196
Query: 228 KEYIGI 233
+ G+
Sbjct: 197 NQLQGL 202
>gi|27376503|ref|NP_768032.1| hypothetical protein blr1392 [Bradyrhizobium japonicum USDA 110]
gi|27349644|dbj|BAC46657.1| blr1392 [Bradyrhizobium japonicum USDA 110]
Length = 234
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 29/181 (16%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ + IV+L G+ SR+ + M L + ++ISG
Sbjct: 49 APDRKADGIVVLTGGS------------------SRVSDAMELLAAGYGR----RLLISG 86
Query: 121 GDPQK--HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
P ++ ++ N + V+ L+ +L T NA + + + K++I+
Sbjct: 87 VHPTSTASDISRTLPENQSFMTCCVD-----LDRTALSTRGNAAEARRWAQARRFKSLIV 141
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
V+S YH+ R+ + F H T + + P A+ L L EY+ + A
Sbjct: 142 VTSNYHMPRALVEFSHAMPETILIPFAVVGDKWREEPWWASASTLRLLLSEYVKYIAAEV 201
Query: 239 R 239
R
Sbjct: 202 R 202
>gi|262191555|ref|ZP_06049737.1| hypothetical protein VIH_001923 [Vibrio cholerae CT 5369-93]
gi|262032563|gb|EEY51119.1| hypothetical protein VIH_001923 [Vibrio cholerae CT 5369-93]
Length = 317
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 22/132 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I V+LG + + + SR+ + + + ++ GG
Sbjct: 7 IYVVLG--------KRLNANQLTLEGKSRVDGLISALQ--CHENTAARVVFCGGITLGQT 56
Query: 128 LAESIVYNNKLLE------SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN------ 175
++E+ + + + D+ LE +S T +N + + ++
Sbjct: 57 VSEAKRMHEYFEQRCQQLGLSFPQIDVLLEQESTSTVENIEHVAQVLLESGVVQRGETLA 116
Query: 176 IILVSSAYHLKR 187
+ LVS+ YHLKR
Sbjct: 117 LTLVSNDYHLKR 128
>gi|229528571|ref|ZP_04417962.1| hypothetical protein VCG_001658 [Vibrio cholerae 12129(1)]
gi|229334933|gb|EEO00419.1| hypothetical protein VCG_001658 [Vibrio cholerae 12129(1)]
Length = 314
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 22/132 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I V+LG + + + SR+ + + + ++ GG
Sbjct: 7 IYVVLG--------KRLNANQLTLEGKSRVDGLISALQ--CHENTAARVVFCGGITLGQT 56
Query: 128 LAESIVYNNKLLE------SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN------ 175
++E+ + + + D+ LE +S T +N + + ++
Sbjct: 57 VSEAKRMHEYFEQRRQQLGLSFPQIDVLLEQESTSTVENIEHVAQVLLESGVVQRGETLA 116
Query: 176 IILVSSAYHLKR 187
+ LVS+ YHLKR
Sbjct: 117 LTLVSNDYHLKR 128
>gi|261339749|ref|ZP_05967607.1| protein YdcF [Enterobacter cancerogenus ATCC 35316]
gi|288318579|gb|EFC57517.1| protein YdcF [Enterobacter cancerogenus ATCC 35316]
Length = 264
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 60/152 (39%), Gaps = 18/152 (11%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR------LYKSCKQHSMHC 114
Q ++++L G +IPTI A S Q + LY + +H +
Sbjct: 30 QPNAPVDLVIL--AGNAVIPTIDAACRVASEQGVPLLISGGIGHSTTFLYAAIARHPRYN 87
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ- 172
I +G AE+ + + E + + I +E QS + +NA+FS IK
Sbjct: 88 RIPTTG-------RAEAAILADIAREVWSIPPERILVEDQSTNCGENARFSWERIKQTGL 140
Query: 173 -GKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
+ +++V +R+ F H + A+
Sbjct: 141 TPERVLVVQDPTMQRRTMATFAHVCRDEPAAP 172
>gi|225628192|ref|ZP_03786227.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617017|gb|EEH14064.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 254
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 72/198 (36%), Gaps = 41/198 (20%)
Query: 13 WHLLCQSIRKI--FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
W ++ + +R++ + F+ + +F+G ++ + + +Q P + IV
Sbjct: 40 WSVMMRILRRLQPVSIILFLAVIAFLGGFLVFSEKVTGMQ--------PPVLSEPAEAIV 91
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGL 128
+L G SR+ + L K + ++ISG P + L
Sbjct: 92 VLTGG------------------QSRVKAGINLLKEKRGK----RLLISGVHPSTNEEAL 129
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ + L ++ D +L+T N S I+ +I+V++ YH+ RS
Sbjct: 130 QRATHADKSLFACCIDLDR-----TALNTVGNVAESERWIRANDYHRVIVVTNNYHIPRS 184
Query: 189 QLYF--QHFGINTKASCS 204
L + +
Sbjct: 185 ILEMSSRMKDVEFIPYPV 202
>gi|113476034|ref|YP_722095.1| hypothetical protein Tery_2404 [Trichodesmium erythraeum IMS101]
gi|110167082|gb|ABG51622.1| protein of unknown function DUF218 [Trichodesmium erythraeum
IMS101]
Length = 226
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 47/136 (34%), Gaps = 29/136 (21%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
L+ K + ++LG S R ++ K H I+
Sbjct: 31 LNSAAKAPVDAYLVLGG------------------SIKREIYITQVAKQY----PHIPIL 68
Query: 118 ISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
IS G + V D + LE + TF N F+ +++ ++I
Sbjct: 69 ISAGSKDPCIV-------KLFQRENVPLDGVWLEHCAKSTFSNFFFTMPILEEWGVQHIK 121
Query: 178 LVSSAYHLKRSQLYFQ 193
LV+S HL R++ Q
Sbjct: 122 LVTSPSHLPRAKWLAQ 137
>gi|325266352|ref|ZP_08133030.1| membrane protein SanA [Kingella denitrificans ATCC 33394]
gi|324982145|gb|EGC17779.1| membrane protein SanA [Kingella denitrificans ATCC 33394]
Length = 216
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 18/141 (12%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY++ K II+SG D +KHG E L+ G+ + I + +
Sbjct: 72 RIRAAADLYRAGKVRY----IIVSG-DNRKHGYNEPEAMKAALVAQGIPAEKIVPDYAGI 126
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T + + S+ + I+VS +H +R+ + GI+ + ++ Y
Sbjct: 127 RTLDSVLRARSI---FGQDSYIVVSQKFHNERAVYLARAHGIDAYGYNAADVDRYSGFKT 183
Query: 216 LSANFYLTELALKEYIGILIA 236
++EY+ +
Sbjct: 184 E----------VREYLARVKM 194
>gi|296270446|ref|YP_003653078.1| hypothetical protein Tbis_2482 [Thermobispora bispora DSM 43833]
gi|296093233|gb|ADG89185.1| protein of unknown function DUF218 [Thermobispora bispora DSM
43833]
Length = 218
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 50/120 (41%), Gaps = 6/120 (5%)
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLD 156
R ++ + I+ +G + E++ + + ++ GV + I LET++ +
Sbjct: 43 ARCAADLYRNGLFPRIVFTGANAPTTIERFPRGEAVHFREEAVKLGVPGEAILLETRATN 102
Query: 157 TFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
T +N F+ ++ + +++ L+S Y +R+ + + C+ + +
Sbjct: 103 TGENIAFTRELLAELGIEVRSVTLISRPYQERRAYATCRRLWPEVEVVCASQPVSLAEYL 162
>gi|254507165|ref|ZP_05119302.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
gi|219549875|gb|EED26863.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
Length = 269
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 18/127 (14%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
I++LG + + + + SR+ + + +I GG
Sbjct: 2 IIVLG--------KRLVCNQLTLEGQSRVDYLADYLQRFELAQTA--LIFCGGVTSGQTD 51
Query: 129 AESIVYNNKLLESGVE--RDDIKLETQSLDTFQNAQFSS-SMIKNMQGK-----NIILVS 180
AE+ + + ++ + LE S +T +N + ++ MI + + + VS
Sbjct: 52 AEAKAMYTRFQQLPIDAKPALVMLEPDSTNTVENVENAALKMIDSNRFNLDECLKVFFVS 111
Query: 181 SAYHLKR 187
+ YHL+R
Sbjct: 112 NDYHLER 118
>gi|323343494|ref|ZP_08083721.1| membrane protein SanA [Prevotella oralis ATCC 33269]
gi|323095313|gb|EFZ37887.1| membrane protein SanA [Prevotella oralis ATCC 33269]
Length = 219
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 9/140 (6%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + P+ +RI T LY+S K I+ISG +P E
Sbjct: 55 GLLLGTNPKGRTGAPNPYYTARIDATAELYRSGK----ISRILISGANPS-ETYNEPEQM 109
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ GV I L+ L T + + + ++S +H +R+ +
Sbjct: 110 KADLMAQGVPDSVIYLDYAGLRTLDSVVRAKEI---FGLHTFTIISQQFHNERALYLSRA 166
Query: 195 FGINTKASCS-DYLNAYYSI 213
GI+ A + D+ N ++
Sbjct: 167 EGIDAIAFNAGDFQNRWWQF 186
>gi|213027332|ref|ZP_03341779.1| hypothetical protein Salmonelentericaenterica_35039 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 127
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 43/100 (43%), Gaps = 12/100 (12%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ ++ G G + PS +R+ + LY+ + ++++GG
Sbjct: 40 ADCAIVAGAGVS--------GKTPSPVFQARLDHAIWLYQQHIVRA----LVLTGGYGAG 87
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
++++ + +LE G+ I +E +S T +N +++
Sbjct: 88 ATVSDAAIARQYVLEKGIPAKAIFIEERSTVTRENIRYAK 127
>gi|172038633|ref|YP_001805134.1| hypothetical protein cce_3720 [Cyanothece sp. ATCC 51142]
gi|171700087|gb|ACB53068.1| DUF218-containing protein [Cyanothece sp. ATCC 51142]
Length = 244
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 57/194 (29%), Gaps = 40/194 (20%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ L + K F F+LL I + +L++ L + I
Sbjct: 6 LDLTGRLNKRKWKKRFKLIFLLLMGLILASLTVNLLVR----------LPINSNHTVDGI 55
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
+LG S R ++ + II+S G
Sbjct: 56 FVLGG------------------SIRREIYAAQIASEYPE----VPIIVSQGSKPP---- 89
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
D + +E + TF N F +++ + +++S HL R++
Sbjct: 90 ---CIKLIFQREHARMDQVWIEQCANSTFDNFFFGIPLLQKHGVHKVKVITSQSHLPRAK 146
Query: 190 LYFQ-HFGINTKAS 202
Q H G A
Sbjct: 147 WLAQIHLGAKGIAV 160
>gi|213025781|ref|ZP_03340228.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. 404ty]
Length = 172
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 8/117 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K E L+ GV I +
Sbjct: 39 RINTAAALYHAGKVKW----LLVSGDNGKKE-YDEPSAMQQALIAKGVPEAAIFCDYAGF 93
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
T + + + I ++S A+H +R+ Q +GI+ + LN +
Sbjct: 94 STLDSVVRARKVFGE---SRITIISQAFHNQRAIWLAQQYGIDAIGVNAPDLNKRHG 147
>gi|116254067|ref|YP_769905.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115258715|emb|CAK09820.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 236
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 75/209 (35%), Gaps = 41/209 (19%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
F I + L+F+ L P + + IV+L G
Sbjct: 36 GFACLLAIALVFGGFLRFADSVTTLKPPTEPKADAIVVLTGG------------------ 77
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN---KLLESGVERDDIKL 150
Y RI + + L + ++ISG A+ L V DI
Sbjct: 78 YQRIDQAVELLQ----KGAGKRLLISG-AHPTTTPAQIRKMTQGSADLFSCCV---DIGY 129
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASC---SD 205
+ ++DT NA+ +S+ I +++++V++ YH+ RS + I A SD
Sbjct: 130 D--AIDTIGNAEEASNWIHAKGYRSVLIVTNNYHMPRSLAELSYVDPDIEFIAYPVVNSD 187
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + P + + L EY+ +L
Sbjct: 188 LKSRNWFTDPNA-----MRVMLAEYVKVL 211
>gi|153828762|ref|ZP_01981429.1| hypothetical protein A59_1503 [Vibrio cholerae 623-39]
gi|148875809|gb|EDL73944.1| hypothetical protein A59_1503 [Vibrio cholerae 623-39]
Length = 317
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 22/132 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I V+LG + + + SR+ + + + ++ GG
Sbjct: 7 IYVVLG--------KRLNANQLTLEGKSRVDGLISALQ--CHENTAARVVFCGGITLGQT 56
Query: 128 LAESIVYNNKLLE------SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN------ 175
++E+ + + + D+ LE +S T +N + + ++
Sbjct: 57 VSEAKRMHEYFEQRRQQLGLSFPQIDVLLEQESTSTVENIEHVAQVLLESGVVQRGETLA 116
Query: 176 IILVSSAYHLKR 187
+ LVS+ YHLKR
Sbjct: 117 LTLVSNDYHLKR 128
>gi|302520680|ref|ZP_07273022.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|302429575|gb|EFL01391.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length = 222
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 50/125 (40%), Gaps = 10/125 (8%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESG 142
I ++ LY++ + T++ +GG+ E++ + ++ G
Sbjct: 36 IGLGSHDLGVATHSVELYRA----GLFPTLVFTGGNSPTTAKVFPRGEAVHFREHAIDLG 91
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGINTK 200
V + I LE ++ +T QN S ++ ++LVS Y +RS + + +
Sbjct: 92 VPAEAILLEPEAGNTGQNVTLSREVLAAAGITPTTVMLVSKPYMERRSFATARKLWPDVE 151
Query: 201 ASCSD 205
C+
Sbjct: 152 ILCAS 156
>gi|295095901|emb|CBK84991.1| Uncharacterized conserved protein [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 262
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 57/143 (39%), Gaps = 18/143 (12%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR------LYKSCKQHSMHC 114
Q + ++++L G +IP I A + Q I LY + +H +
Sbjct: 28 QDNQPVDLVIL--AGNAVIPAIDAACKIAAEQGVPLIISGGIGHSTTFLYAAIAKHPRYN 85
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ- 172
I +G AE+ + + E + + + +E QS + +NA+FS +++K
Sbjct: 86 RIPTTG-------RAEAAILADIAREFWNIPAEHLHVEDQSTNCGENARFSRALMKQSGL 138
Query: 173 -GKNIILVSSAYHLKRSQLYFQH 194
+++V +R+ F
Sbjct: 139 NAARVLVVQDPTMQRRTMATFAR 161
>gi|15601354|ref|NP_232985.1| hypothetical protein VCA0595 [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|121587472|ref|ZP_01677240.1| hypothetical protein VC274080_A0643 [Vibrio cholerae 2740-80]
gi|121725901|ref|ZP_01679201.1| hypothetical protein VCV52_A0551 [Vibrio cholerae V52]
gi|147671424|ref|YP_001215378.1| hypothetical protein VC0395_0539 [Vibrio cholerae O395]
gi|153817945|ref|ZP_01970612.1| hypothetical protein A5C_A0776 [Vibrio cholerae NCTC 8457]
gi|227812163|ref|YP_002812173.1| hypothetical protein VCM66_A0554 [Vibrio cholerae M66-2]
gi|229506234|ref|ZP_04395743.1| hypothetical protein VCF_001450 [Vibrio cholerae BX 330286]
gi|229509907|ref|ZP_04399387.1| hypothetical protein VCE_001308 [Vibrio cholerae B33]
gi|229516532|ref|ZP_04405979.1| hypothetical protein VCC_000547 [Vibrio cholerae RC9]
gi|229605774|ref|YP_002876478.1| hypothetical protein VCD_000722 [Vibrio cholerae MJ-1236]
gi|254849755|ref|ZP_05239105.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255746627|ref|ZP_05420574.1| hypothetical protein VCH_003020 [Vibrio cholera CIRS 101]
gi|262158781|ref|ZP_06029894.1| hypothetical protein VIG_002019 [Vibrio cholerae INDRE 91/1]
gi|262168448|ref|ZP_06036144.1| hypothetical protein VIJ_001634 [Vibrio cholerae RC27]
gi|298499406|ref|ZP_07009212.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9658007|gb|AAF96497.1| hypothetical protein VC_A0595 [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548307|gb|EAX58373.1| hypothetical protein VC274080_A0643 [Vibrio cholerae 2740-80]
gi|121631666|gb|EAX64034.1| hypothetical protein VCV52_A0551 [Vibrio cholerae V52]
gi|126511483|gb|EAZ74077.1| hypothetical protein A5C_A0776 [Vibrio cholerae NCTC 8457]
gi|146313807|gb|ABQ18347.1| hypothetical protein VC0395_0539 [Vibrio cholerae O395]
gi|227011305|gb|ACP07516.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|227015344|gb|ACP11553.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229346413|gb|EEO11384.1| hypothetical protein VCC_000547 [Vibrio cholerae RC9]
gi|229352352|gb|EEO17292.1| hypothetical protein VCE_001308 [Vibrio cholerae B33]
gi|229356585|gb|EEO21503.1| hypothetical protein VCF_001450 [Vibrio cholerae BX 330286]
gi|229372260|gb|ACQ62682.1| hypothetical protein VCD_000722 [Vibrio cholerae MJ-1236]
gi|254845460|gb|EET23874.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255736381|gb|EET91779.1| hypothetical protein VCH_003020 [Vibrio cholera CIRS 101]
gi|262022977|gb|EEY41682.1| hypothetical protein VIJ_001634 [Vibrio cholerae RC27]
gi|262029354|gb|EEY48005.1| hypothetical protein VIG_002019 [Vibrio cholerae INDRE 91/1]
gi|297541387|gb|EFH77438.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 317
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 22/132 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I V+LG + + + SR+ + + + ++ GG
Sbjct: 7 IYVVLG--------KRLNANQLTLEGKSRVDGLISALQ--CHENTAARVVFCGGITLGQT 56
Query: 128 LAESIVYNNKLLE------SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN------ 175
++E+ + + + D+ LE +S T +N + + ++
Sbjct: 57 VSEAKRMHEYFEQRRQQLGLSFPQIDVLLEQESTSTVENIEHVAQVLLESGVVQRGETLA 116
Query: 176 IILVSSAYHLKR 187
+ LVS+ YHLKR
Sbjct: 117 LTLVSNDYHLKR 128
>gi|307154403|ref|YP_003889787.1| hypothetical protein Cyan7822_4604 [Cyanothece sp. PCC 7822]
gi|306984631|gb|ADN16512.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7822]
Length = 229
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 40/194 (20%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ L Q R+ FF + + + ++ + ++ PL S + I
Sbjct: 6 IDLTGRLAQKKRQRFFKLALIAGIALMVISLLFNVAVRL-------PLNSS---APVDGI 55
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG S R RL HS II +G L
Sbjct: 56 LVLGG------------------SIQREIYAARL---THLHSNIPVIISTGSKDPCIWLL 94
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+ + LE + TF N +S ++++ + +++S HL R++
Sbjct: 95 FKRNMAQ--------SNKVILEKCANSTFGNFFYSVPILRHWGVHKVKVITSPSHLPRAK 146
Query: 190 LYFQ-HFGINTKAS 202
Q H G A
Sbjct: 147 WLAQIHLGAQGIAV 160
>gi|254285215|ref|ZP_04960181.1| hypothetical protein A33_A0882 [Vibrio cholerae AM-19226]
gi|150425218|gb|EDN16995.1| hypothetical protein A33_A0882 [Vibrio cholerae AM-19226]
Length = 312
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 22/132 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I V+LG + + + SR+ + + + ++ GG
Sbjct: 7 IYVVLG--------KRLNANQLTLEGKSRVDGLISALQ--CHENTAARVVFCGGITLGQT 56
Query: 128 LAESIVYNNKLLE------SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN------ 175
++E+ + + + D+ LE +S T +N + + ++
Sbjct: 57 VSEAKRMHEYFEQHRQQLGLSFPQIDVLLEQESTSTVENIEHVAQVLLESGVVQRGETLA 116
Query: 176 IILVSSAYHLKR 187
+ LVS+ YHLKR
Sbjct: 117 LTLVSNDYHLKR 128
>gi|74312237|ref|YP_310656.1| hypothetical protein SSON_1732 [Shigella sonnei Ss046]
gi|73855714|gb|AAZ88421.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|323169685|gb|EFZ55352.1| hypothetical protein SS53G_0069 [Shigella sonnei 53G]
Length = 226
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 22/186 (11%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATIQADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N A +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRMTGDNPDA---PRWLSYPGFVPQLGNNADSVIFI 196
Query: 228 KEYIGI 233
+ G+
Sbjct: 197 NQLQGL 202
>gi|302407508|ref|XP_003001589.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261359310|gb|EEY21738.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 221
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 6/104 (5%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKLETQ 153
+ + +I SG E+ + + GV I +E
Sbjct: 42 VRVAARAAQLFLNGVAPLLIFSGNTGALTAGLFDKPEAEFFADIARSMGVPDASILVEPT 101
Query: 154 SLDTFQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHF 195
+ +T +N +F+ ++++ K + ILV Y +R+ F
Sbjct: 102 ATNTGENVRFTRKLLEDRGVKVESFILVQKPYMERRTYATFLKQ 145
>gi|229525956|ref|ZP_04415360.1| hypothetical protein VCA_000062 [Vibrio cholerae bv. albensis
VL426]
gi|229336114|gb|EEO01132.1| hypothetical protein VCA_000062 [Vibrio cholerae bv. albensis
VL426]
Length = 312
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 22/132 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I V+LG + + + SR+ + + + ++ GG
Sbjct: 7 IYVVLG--------KRLNANQLTLEGKSRVDGLISALQ--CHENTAARVVFCGGITLGQT 56
Query: 128 LAESIVYNNKLLE------SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN------ 175
++E+ + + + D+ LE +S T +N + + ++
Sbjct: 57 VSEAKRMHEYFEQRRQQLGLSFPQIDVLLEQESTSTVENIEHVAQVLLESGVVQRGETLA 116
Query: 176 IILVSSAYHLKR 187
+ LVS+ YHLKR
Sbjct: 117 LTLVSNDYHLKR 128
>gi|126659613|ref|ZP_01730743.1| hypothetical protein CY0110_25226 [Cyanothece sp. CCY0110]
gi|126619059|gb|EAZ89798.1| hypothetical protein CY0110_25226 [Cyanothece sp. CCY0110]
Length = 243
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 54/179 (30%), Gaps = 38/179 (21%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
F+LL FI ++ +L++ L + I++LG
Sbjct: 24 IFVLLIGFILTSLVFNVLVR----------LPINTNHSVDGILVLGG------------- 60
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
S R + + II+S G
Sbjct: 61 -----SIRREIHAAEIASQYEYQE--VPIIVSQGSKPP-------CIKLIFQREQARMHK 106
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ-HFGINTKASCSD 205
+ +E + TF N F +++ + +++S HL R++ Q H G A D
Sbjct: 107 VWIEQCAYSTFDNFFFCVPLLQKHGVHKVKVITSQSHLPRAKWLSQIHLGAKGIAVEVD 165
>gi|146298194|ref|YP_001192785.1| hypothetical protein Fjoh_0430 [Flavobacterium johnsoniae UW101]
gi|146152612|gb|ABQ03466.1| protein of unknown function DUF218 [Flavobacterium johnsoniae
UW101]
Length = 219
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/212 (15%), Positives = 74/212 (34%), Gaps = 29/212 (13%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
++K F ++ ++ + I + + + + S + ++ ++ G G
Sbjct: 1 MKKYFKIAFYLAIIGLIAVVTVNYWVKSSTE---TKIYYSIKKLPKNDVGIIFGAGINGD 57
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+PS R+ + L+K+ + + I++SG + + E V N
Sbjct: 58 --------QPSKYLKDRLDAGIMLWKAKRIN----KILLSGDNGRDE-YDELTVMKNYCY 104
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV+ I ++ DT+ + + K K L+S YHL R+ I +
Sbjct: 105 NQGVDTTKIFVDYAGFDTYSTMYRAKHIFK---IKKATLISQEYHLNRAVYIGNKLEIKS 161
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
++ + +EY+
Sbjct: 162 VGFSAN----------NGEYLGYKYVTFREYL 183
>gi|17227740|ref|NP_484288.1| hypothetical protein all0244 [Nostoc sp. PCC 7120]
gi|17135222|dbj|BAB77768.1| all0244 [Nostoc sp. PCC 7120]
Length = 174
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 57/148 (38%), Gaps = 27/148 (18%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
+L L + + + +IVL G+ +R E +
Sbjct: 1 MLFLPLLMWFGYQEAKNAYTQPQAVIVLGGS--------------------TRNLEREKF 40
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
S + + I ISGG P + ++G++ + L+ +++DT N
Sbjct: 41 TASFARKHPNLPIWISGGSPPVYT-------KRVFKKAGIDTKRLHLDYEAVDTVTNFTT 93
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+++ K++ L++S +H++R+ +
Sbjct: 94 LIDELQSRGIKSVYLITSDFHMRRACII 121
>gi|260590748|ref|ZP_05856206.1| SanA protein [Prevotella veroralis F0319]
gi|260537234|gb|EEX19851.1| SanA protein [Prevotella veroralis F0319]
Length = 197
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 69/182 (37%), Gaps = 28/182 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ P P K +LLG P+ +RI + LYK+ K
Sbjct: 36 FDNPAEVPAMKTA----ILLG-----TSPKSRYSEGPNLFFQARINAAVELYKNHKYKQ- 85
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+IISG ++ G E L+ G+ + I ++ TF + + + +
Sbjct: 86 ---LIISG--EKRKGYDEPSAMKKNLIVRGIPANIIHMDGSGHRTFLSMRN---IQEEYH 137
Query: 173 GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+II++S +H +RS H GI ++ ++ +++ + ++E +
Sbjct: 138 ADSIIIISQKWHNQRSIYLADHLGIYAVGYNAEDVHDFFAQLTH----------IRELLA 187
Query: 233 IL 234
+
Sbjct: 188 RV 189
>gi|238020831|ref|ZP_04601257.1| hypothetical protein GCWU000324_00721 [Kingella oralis ATCC 51147]
gi|237867811|gb|EEP68817.1| hypothetical protein GCWU000324_00721 [Kingella oralis ATCC 51147]
Length = 212
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 68/217 (31%), Gaps = 25/217 (11%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K + L ++ + Y + +LLG P
Sbjct: 2 KTPLILAIALFALLTAITLLANWHTQRQTAPYLY--THAEQIPAQKAALLLG----TSPL 55
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ R F RI LY++ K II+ GD +KHG E L+
Sbjct: 56 LANGRSNLYFT--HRIRAAAELYRAGKVRY-----IIASGDNRKHGYNEPEAMKAALIAQ 108
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + I + + T + + S+ I+VS +H +R+ + GI
Sbjct: 109 GVPAERIVPDYAGIRTLDSVLRARSVFGQADY---IVVSQKFHNERAVYLARAHGIRAVG 165
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ ++ Y ++EY + Y
Sbjct: 166 YNAPDVHLYAGGFKTR---------VREYGARMKMYL 193
>gi|282897433|ref|ZP_06305435.1| Protein of unknown function DUF218 [Raphidiopsis brookii D9]
gi|281198085|gb|EFA72979.1| Protein of unknown function DUF218 [Raphidiopsis brookii D9]
Length = 184
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 67/182 (36%), Gaps = 48/182 (26%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
F +L FI WG + +Q + P +++LG
Sbjct: 2 FFILPIFIWWG------YREVQNQFSIP----------QAVLVLGG-------------- 31
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
S+ E R + + + I I+GG P H ++GV +
Sbjct: 32 -----SSKHLERERFAANFAKKHPNIPIWITGGSPADHT-------KKVFKKAGVNLSRL 79
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY------FQHFGINTKAS 202
L+ +++DT N +++ + K++ L++S +H++R+++ + + +
Sbjct: 80 HLDYEAVDTVTNFTTIVDDLQDKKIKSVYLITSDFHMRRARVVGEIILGTRDISLKPISV 139
Query: 203 CS 204
S
Sbjct: 140 PS 141
>gi|283833028|ref|ZP_06352769.1| protein YdcF [Citrobacter youngae ATCC 29220]
gi|291070644|gb|EFE08753.1| protein YdcF [Citrobacter youngae ATCC 29220]
Length = 265
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 44/167 (26%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
+ R+ K + ++ISGG + G AE+ + +
Sbjct: 51 LDAACRIAKDQQV-----PLLISGGIGHSTRFLYDAIARHPRYNIIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQH 194
+ + + I +E QS + +NA+FS +++ +I+V +R+ FQ
Sbjct: 106 AHQFWQIPGEKIWVEDQSTNCGENARFSCALLNQATESIHTVIVVQDPTMQRRTMATFQR 165
Query: 195 F--------------GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
G + + +P + + + L
Sbjct: 166 VTRDEPHAPRWLSFPGFIPELA---QRQDGVDFVPAAEGLWSVDRYL 209
>gi|126731355|ref|ZP_01747162.1| hypothetical protein SSE37_06799 [Sagittula stellata E-37]
gi|126708266|gb|EBA07325.1| hypothetical protein SSE37_06799 [Sagittula stellata E-37]
Length = 177
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 16/140 (11%)
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
++ ++LG G+ P + R+ + LY++ + + +H ++ G+
Sbjct: 4 PRDVAIVLGGGSAPDRLTP--------DTTMRVAAGVELYRNGRVNRLH----MTCGNTH 51
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ + +GV + E QSL T QNA FS + +G+ +V+ +H
Sbjct: 52 PGTRP-GRLMAEAAIRAGVPPTAVTWEGQSLSTLQNALFSRPDLP--RGETRFVVTEPFH 108
Query: 185 LKRSQLYFQHFGINTKASCS 204
R G A C+
Sbjct: 109 GLRGAASLAWAG-RPAAVCT 127
>gi|254226453|ref|ZP_04920039.1| hypothetical protein VCV51_A0448 [Vibrio cholerae V51]
gi|125621015|gb|EAZ49363.1| hypothetical protein VCV51_A0448 [Vibrio cholerae V51]
Length = 317
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 22/132 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I V+LG + + + SR+ + + + ++ GG
Sbjct: 7 IYVVLG--------KRLNANQLTLEGKSRVDGLISALQ--CHENKAARVVFCGGITLGQT 56
Query: 128 LAESIVYNNKLLE------SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN------ 175
++E+ + + + D+ LE +S T +N + + ++
Sbjct: 57 VSEAKRMHEYFEQRRQQLGLSFPQIDVLLEQESTSTVENIEHVAQVLLESGVVQRGETLA 116
Query: 176 IILVSSAYHLKR 187
+ LVS+ YHLKR
Sbjct: 117 LTLVSNDYHLKR 128
>gi|315122363|ref|YP_004062852.1| hypothetical protein CKC_03075 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495765|gb|ADR52364.1| hypothetical protein CKC_03075 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 85
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 36 IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
IG G+IP ILLK+LQF YQ PL SPQW+K+GNIIVLLGNGT IPT+P + IE F
Sbjct: 5 IGSGLIPAILLKNLQFPYQTPLSSPQWEKEGNIIVLLGNGTEKIPTLPTVGIELLFN 61
>gi|153214581|ref|ZP_01949468.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124115279|gb|EAY34099.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 312
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 22/132 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I V+LG + + + SR+ + + + ++ GG
Sbjct: 7 IYVVLG--------KRLNANQLTLEGKSRVDGLISALQ--CHENTAARVVFCGGITLGQT 56
Query: 128 LAESIVYNNKLLE------SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN------ 175
++E+ + + + D+ LE +S T +N + + ++
Sbjct: 57 VSEAKRMHEYFEQRRQQLGLSFPQIDVLLEQESTSTVENIEHVAQVLLESGVVQRGETLA 116
Query: 176 IILVSSAYHLKR 187
+ LVS+ YHLKR
Sbjct: 117 LTLVSNDYHLKR 128
>gi|26249675|ref|NP_755715.1| hypothetical protein c3844 [Escherichia coli CFT073]
gi|227887811|ref|ZP_04005616.1| membrane protein [Escherichia coli 83972]
gi|300973024|ref|ZP_07172048.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|301048072|ref|ZP_07195112.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|26110103|gb|AAN82289.1|AE016767_49 Hypothetical protein ygjQ [Escherichia coli CFT073]
gi|227835207|gb|EEJ45673.1| membrane protein [Escherichia coli 83972]
gi|300300086|gb|EFJ56471.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300410916|gb|EFJ94454.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|315294962|gb|EFU54299.1| conserved hypothetical protein [Escherichia coli MS 153-1]
Length = 233
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 68/193 (35%), Gaps = 23/193 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ + C +LL + I ++ + ++ ++ +LLG
Sbjct: 19 RRTLKIGCLLLLIAG-ATLFIADRVMVNASQQLTWSDVNAVPARNVG--LLLGA------ 69
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 70 -RPGNRY-----FTRRIDTAAELYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIA 118
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 119 KGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDAI 175
Query: 201 ASCSDYLNAYYSI 213
+ LN +
Sbjct: 176 GFNAPDLNMKHGF 188
>gi|229523089|ref|ZP_04412501.1| hypothetical protein VIF_003661 [Vibrio cholerae TM 11079-80]
gi|229339939|gb|EEO04949.1| hypothetical protein VIF_003661 [Vibrio cholerae TM 11079-80]
Length = 317
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 22/132 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I V+LG + + + SR+ + + + ++ GG
Sbjct: 7 IYVVLG--------KRLNANQLTLEGKSRVDGLISALQ--CHENTEARVVFCGGITLGQT 56
Query: 128 LAESIVYNNKLLE------SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN------ 175
++E+ + + + D+ LE +S T +N + + ++
Sbjct: 57 VSEAKRMHEYFEQRRQQLGLSFPQIDVLLEQESTSTVENIEHVAQVLLESGVVQRGETLA 116
Query: 176 IILVSSAYHLKR 187
+ LVS+ YHLKR
Sbjct: 117 LTLVSNDYHLKR 128
>gi|182625897|ref|ZP_02953662.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|177908810|gb|EDT71308.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
Length = 207
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYF 192
L + V + I +E +S +T +NA FS + ++ K+ IL A+H +R+ + +
Sbjct: 84 KEVLFRNDVPLESILVENKSTNTSENAFFSRKVTDDLNIEVKSAILCCQAFHARRALITY 143
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ Y+ + N+Y ++ + +G L
Sbjct: 144 SLA----YPNTQFYVVPVETQGISKDNWYKSDYGINRVLGEL 181
>gi|168216074|ref|ZP_02641699.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
gi|182381565|gb|EDT79044.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
Length = 207
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYF 192
L + V + I +E +S +T +NA FS + ++ K+ IL A+H +R+ + +
Sbjct: 84 KEVLFRNDVPLESILVENKSTNTSENAFFSRKVTDDLNIEVKSAILCCQAFHARRALITY 143
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ Y+ + N+Y ++ + +G L
Sbjct: 144 SLA----YPNTQFYVVPVETQGISKDNWYKSDYGINRVLGEL 181
>gi|110802720|ref|YP_698276.1| hypothetical protein CPR_0952 [Clostridium perfringens SM101]
gi|110683221|gb|ABG86591.1| conserved hypothetical protein [Clostridium perfringens SM101]
Length = 199
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYF 192
L + V + I +E +S +T +NA FS + ++ K+ IL A+H +R+ + +
Sbjct: 84 KEVLFRNDVPLESILVENKSTNTSENAFFSRKVTDDLNIEVKSAILCCQAFHARRALITY 143
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ Y+ + N+Y ++ + +G L
Sbjct: 144 SLA----YPNTQFYVVPVETQGISKDNWYKSDYGINRVLGEL 181
>gi|110799112|ref|YP_695535.1| hypothetical protein CPF_1089 [Clostridium perfringens ATCC 13124]
gi|110673759|gb|ABG82746.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
Length = 199
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYF 192
L + V + I +E +S +T +NA FS + ++ K+ IL A+H +R+ + +
Sbjct: 84 KEVLFRNDVPLESILVENKSTNTSENAFFSRKVTDDLNIEVKSAILCCQAFHARRALITY 143
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ Y+ + N+Y ++ + +G L
Sbjct: 144 SLA----YPNTQFYVVPVETQGISKDNWYKSDYGINRVLGEL 181
>gi|331662890|ref|ZP_08363800.1| protein YdcF [Escherichia coli TA143]
gi|331058689|gb|EGI30666.1| protein YdcF [Escherichia coli TA143]
Length = 266
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEMPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N + +Y ++P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRMTGDNPD---APRWLSYPGLVPQLGNNADSVIFI 196
Query: 228 KEYIGI 233
+ G+
Sbjct: 197 NQLQGL 202
>gi|289808951|ref|ZP_06539580.1| SanA protein [Salmonella enterica subsp. enterica serovar Typhi
str. AG3]
Length = 203
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 23/187 (12%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
M+CF+L+ + + L+ + + ++ ++LG P
Sbjct: 1 MACFLLVAAGVA-LFYSNWLIVNASQHLTWNDIQTVPARNVG--LVLGA-------KPGN 50
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R RI LY + K +++SG + +K E L+ GV
Sbjct: 51 RY-----FTRRINTAAALYHAGKVKW----LLVSGDNGKKE-YDEPSAMQQALIAKGVPE 100
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
I + T + + + I ++S A+H +R+ Q +GI+ +
Sbjct: 101 AAIFCDYAGFSTLDSVVRARKVFGE---SRITIISQAFHNQRAIWLAQQYGIDAIGVNAP 157
Query: 206 YLNAYYS 212
LN +
Sbjct: 158 DLNKRHG 164
>gi|282900742|ref|ZP_06308684.1| protein of unknown function DUF218 [Cylindrospermopsis raciborskii
CS-505]
gi|281194542|gb|EFA69497.1| protein of unknown function DUF218 [Cylindrospermopsis raciborskii
CS-505]
Length = 175
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 68/182 (37%), Gaps = 48/182 (26%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
F +L FI WG + +Q + P +++LG
Sbjct: 2 FFILPIFIWWG------YREVQNQFSIP----------QAVLVLGG-------------- 31
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
S R+ E R + + + I I+GG P H ++GV +
Sbjct: 32 ----SSKRL-ERERFAANFAKKHPNIPIWITGGSPPDHT-------KKVFAKAGVNLSRL 79
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY------FQHFGINTKAS 202
L+ +++DT N +++ + K++ L++S +H++R+++ + + +
Sbjct: 80 HLDYEAVDTVTNFTTILDDLQDKKIKSVYLITSDFHMRRARVVGEIILGTRDISLKPISV 139
Query: 203 CS 204
S
Sbjct: 140 PS 141
>gi|302520649|ref|ZP_07272991.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|302429544|gb|EFL01360.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length = 220
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
RLY + + T S ++ E+ Y + + GV I +E ++ +T +
Sbjct: 43 AARLYLAGTVPLLVFTGATSATTRERMPRGEAEHYRQRAVALGVPPRVILVEPEARNTGE 102
Query: 160 NAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHF 195
N + S ++++ + +LV Y +R+ Q
Sbjct: 103 NIRLSRALLEREGVDVRSALLVCKPYEERRAYATAQKL 140
>gi|222034815|emb|CAP77558.1| Uncharacterized protein ygjQ [Escherichia coli LF82]
gi|307555191|gb|ADN47966.1| hypothetical protein YgjQ [Escherichia coli ABU 83972]
gi|312947655|gb|ADR28482.1| putative thioredoxin-like protein [Escherichia coli O83:H1 str. NRG
857C]
Length = 230
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 68/193 (35%), Gaps = 23/193 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ + C +LL + I ++ + ++ ++ +LLG
Sbjct: 16 RRTLKIGCLLLLIAG-ATLFIADRVMVNASQQLTWSDVNAVPARNVG--LLLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 -RPGNRY-----FTRRIDTAAELYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 116 KGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDAI 172
Query: 201 ASCSDYLNAYYSI 213
+ LN +
Sbjct: 173 GFNAPDLNMKHGF 185
>gi|298491733|ref|YP_003721910.1| hypothetical protein Aazo_2992 ['Nostoc azollae' 0708]
gi|298233651|gb|ADI64787.1| protein of unknown function DUF218 ['Nostoc azollae' 0708]
Length = 232
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 58/176 (32%), Gaps = 41/176 (23%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + ++ F L F W TI L K + ++LG
Sbjct: 18 RKLWRLLQNIVFGLCFILFSWLTFTTITL------------VSASSKPVDGFLVLGG--- 62
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
S R +L K I+IS G P I++ +
Sbjct: 63 ---------------SIRREIHAAQLAKQY----PQIPILISQGSP---DPCIWIIFQRE 100
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ + LE + TF+N +++N + + + L++S H R++L Q
Sbjct: 101 AAHL----EKVWLENCAHSTFENFYNGVPILRNWRVRKVKLITSGTHFFRAKLMAQ 152
>gi|297580399|ref|ZP_06942326.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297536045|gb|EFH74879.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 317
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 22/132 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I V+LG + + + SR+ + + + ++ GG
Sbjct: 7 IYVVLG--------KRLNANQLTLEGKSRVDGLISALQ--CHENKAARVVFCGGITLGQT 56
Query: 128 LAESIVYNNKLLE------SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN------ 175
++E+ + + + D+ LE +S T +N + + ++
Sbjct: 57 VSEAKRMHEYFEQRRQQLGLSFPQIDVLLEQESTSTVENIEHVAQVLLESGVVQRGETLA 116
Query: 176 IILVSSAYHLKR 187
+ LVS+ YHLKR
Sbjct: 117 LTLVSNDYHLKR 128
>gi|260434764|ref|ZP_05788734.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
gi|260412638|gb|EEX05934.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
Length = 188
Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 62/187 (33%), Gaps = 46/187 (24%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ + L+ +G G + Y+R LL + ++++LG
Sbjct: 2 RTGLLLGAGLMAWLLGPGPLS---------PYRRALLDRSPPQ---LVLVLGG------- 42
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
R RL + + +++SGG +++ + L E
Sbjct: 43 -----------DVDRERMGARLARQ-----LDLPLLVSGGSNREY----AEWM---LSEE 79
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL----YFQHFGI 197
D + L+ ++ DT N ++ ++++LV+S HL RS GI
Sbjct: 80 RFNPDRVTLDYRARDTLSNFTSVVDELQADGVRHVLLVTSEDHLPRSMAVGQVVAGSRGI 139
Query: 198 NTKASCS 204
Sbjct: 140 QLTGVPV 146
>gi|329945798|ref|ZP_08293485.1| hypothetical protein HMPREF9056_01374 [Actinomyces sp. oral taxon
170 str. F0386]
gi|328528246|gb|EGF55224.1| hypothetical protein HMPREF9056_01374 [Actinomyces sp. oral taxon
170 str. F0386]
Length = 280
Score = 60.3 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 15/128 (11%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ ++LG +PS R+ LY S + + I++SG D ++
Sbjct: 102 APVAIVLGAAVHAD-------GQPSPWLSYRLDTAADLYTSGRVEA----ILVSG-DNRR 149
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
G E V + L G+ I L+ DT+ + + + +LV+ +H
Sbjct: 150 VGYDEPTVMRDYLTSKGIPSQAIALDYAGFDTYDTCVRARRI---FGIERALLVTQDFHE 206
Query: 186 KRSQLYFQ 193
R+ +
Sbjct: 207 PRAVAICR 214
>gi|146311605|ref|YP_001176679.1| hypothetical protein Ent638_1952 [Enterobacter sp. 638]
gi|145318481|gb|ABP60628.1| protein of unknown function DUF218 [Enterobacter sp. 638]
Length = 264
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 58/143 (40%), Gaps = 18/143 (12%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR------LYKSCKQHSMHC 114
Q + + ++L G +IPTI A S Q + LY + +H +
Sbjct: 30 QPGESVDSVIL--AGNAVIPTIDAACRVASEQGVPLLISGGIGHSTTFLYAATARHPRYN 87
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ- 172
T+ +G AE+ + + + + + +++E QS + +NA++S +++
Sbjct: 88 TVPTTG-------RAEAAILADIARQFWNIPDERLQVEDQSTNCGENARYSRDILQQHPP 140
Query: 173 -GKNIILVSSAYHLKRSQLYFQH 194
+++V +R+ F
Sbjct: 141 LPGRVLVVQDPTMQRRTMATFAR 163
>gi|241206553|ref|YP_002977649.1| hypothetical protein Rleg_3867 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860443|gb|ACS58110.1| protein of unknown function DUF218 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 238
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 75/209 (35%), Gaps = 41/209 (19%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
F I + L+F+ L P + + IV+L G
Sbjct: 38 GFACLLAIALVFGGFLRFADSVTTLKPPAEPKADAIVVLTGG------------------ 79
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN---KLLESGVERDDIKL 150
Y RI + + L + ++ISG A+ L V DI
Sbjct: 80 YQRIDQAVELLQ----KGAGKRLLISG-VHPTTTPAQIRKMTQGSADLFSCCV---DIGY 131
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASC---SD 205
+ ++DT NA+ +S+ I +++++V++ YH+ RS + I A SD
Sbjct: 132 D--AIDTIGNAEEASNWIHTKGYRSVLIVTNNYHMPRSLAELSYVDPDIEFIAYPVVNSD 189
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + P + + L EY+ +L
Sbjct: 190 LKSRNWFTDPNA-----MRVMLAEYVKVL 213
>gi|170681330|ref|YP_001743812.1| hypothetical protein EcSMS35_1758 [Escherichia coli SMS-3-5]
gi|218704884|ref|YP_002412403.1| hypothetical protein ECUMN_1662 [Escherichia coli UMN026]
gi|293404895|ref|ZP_06648887.1| YdcF protein [Escherichia coli FVEC1412]
gi|298380538|ref|ZP_06990137.1| ydcF [Escherichia coli FVEC1302]
gi|300900088|ref|ZP_07118282.1| putative protein YdcF [Escherichia coli MS 198-1]
gi|300939164|ref|ZP_07153850.1| putative protein YdcF [Escherichia coli MS 21-1]
gi|170519048|gb|ACB17226.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
gi|218431981|emb|CAR12866.1| conserved hypothetical protein [Escherichia coli UMN026]
gi|291427103|gb|EFF00130.1| YdcF protein [Escherichia coli FVEC1412]
gi|298277980|gb|EFI19494.1| ydcF [Escherichia coli FVEC1302]
gi|300356367|gb|EFJ72237.1| putative protein YdcF [Escherichia coli MS 198-1]
gi|300455937|gb|EFK19430.1| putative protein YdcF [Escherichia coli MS 21-1]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 22/186 (11%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N A +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRMTGDNPDA---PRWLSYPGFVPQLGNNADSVIFI 196
Query: 228 KEYIGI 233
+ G+
Sbjct: 197 NQLQGL 202
>gi|62180205|ref|YP_216622.1| hypothetical protein SC1635 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62127838|gb|AAX65541.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|322714677|gb|EFZ06248.1| Protein ydcF [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|238911974|ref|ZP_04655811.1| hypothetical protein SentesTe_12711 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTSGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|331652676|ref|ZP_08353687.1| protein YdcF [Escherichia coli M718]
gi|331049782|gb|EGI21848.1| protein YdcF [Escherichia coli M718]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 22/186 (11%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAISQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N A +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRMTGDNPDA---PRWLSYPGFVPQLGNNADSVIFI 196
Query: 228 KEYIGI 233
+ G+
Sbjct: 197 NQLQGL 202
>gi|331654688|ref|ZP_08355688.1| conserved hypothetical protein [Escherichia coli M718]
gi|331048070|gb|EGI20147.1| conserved hypothetical protein [Escherichia coli M718]
Length = 230
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 70/194 (36%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ ++C +LL + I +++ Q ++ + P +LLG
Sbjct: 16 RRTLKIACLLLLVAGATIFIADRVMVNASKQLTWSDVNVVPARNVG----LLLGA----- 66
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 --RPGNRY-----FTRRIDTAAELYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 114
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 115 AKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDA 171
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 172 IGFNAPDLNMKHGF 185
>gi|161613895|ref|YP_001587860.1| hypothetical protein SPAB_01632 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161363259|gb|ABX67027.1| hypothetical protein SPAB_01632 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|213161268|ref|ZP_03346978.1| hypothetical protein Salmoneentericaenterica_15045 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
Length = 241
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|200390558|ref|ZP_03217169.1| protein YdcF [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|199603003|gb|EDZ01549.1| protein YdcF [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVITRHPRYHTIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|293414754|ref|ZP_06657403.1| ydcF protein [Escherichia coli B185]
gi|291434812|gb|EFF07785.1| ydcF protein [Escherichia coli B185]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 22/186 (11%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N + +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRMTGDNPD---APRWLSYPGFVPQLGNNADSVIFI 196
Query: 228 KEYIGI 233
+ G+
Sbjct: 197 NQLQGL 202
>gi|237731631|ref|ZP_04562112.1| YdcF [Citrobacter sp. 30_2]
gi|226907170|gb|EEH93088.1| YdcF [Citrobacter sp. 30_2]
Length = 263
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 56/166 (33%), Gaps = 45/166 (27%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K + ++ISGG + G AE+ + +
Sbjct: 49 IDAACRIAKEQQV-----PLLISGGIGHSTRFLYDAIAQHPRYSIIRTTGRAEAAILADI 103
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQH 194
+ + + I +E QS + +NA+FS +++ +I+V +R+ FQ
Sbjct: 104 AHQFWQIPGEKIWVEDQSTNCGENARFSCALLNQAAESIHTVIVVQDPTMQRRTMATFQR 163
Query: 195 F--------------GINTKAS----CSDYLNAYYSIIPLSANFYL 222
G + + D++ A + P+ L
Sbjct: 164 VTRDEPHAPRWLSFPGFIPELAQQHNGVDFVPAAEGLWPVERYLSL 209
>gi|320178240|gb|EFW53216.1| Protein ydcF [Shigella boydii ATCC 9905]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 31/160 (19%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I ++ + + ++ISGG + G AE+ + +
Sbjct: 51 IDAACKIARDQQI-----PLLISGGIGHSTTFLYSAIAQHPHYNTVRTTGRAEATILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQH 194
+ + + I +E QS + +NA+FS +++ + I+V +R+ F+
Sbjct: 106 AHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQDPTMQRRTMATFRR 165
Query: 195 F-GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
G N A +Y +P N + + + + G+
Sbjct: 166 MTGDNPDA---PRWLSYPGFVPQLGNNADSVIFINQLKGL 202
>gi|293416524|ref|ZP_06659163.1| ygjQ protein [Escherichia coli B185]
gi|291431880|gb|EFF04863.1| ygjQ protein [Escherichia coli B185]
Length = 230
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 69/193 (35%), Gaps = 23/193 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ ++C +LL + I ++ + ++ ++ +LLG
Sbjct: 16 RRTLKIACLLLLVAG-ATLFIADRVMVNASKQLTWSDVNVVPARNVG--LLLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 -RPGNRY-----FTRRIDTAAELYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 116 KGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDAI 172
Query: 201 ASCSDYLNAYYSI 213
+ LN +
Sbjct: 173 GFNAPDLNMKHGF 185
>gi|323976942|gb|EGB72029.1| hypothetical protein ERFG_01943 [Escherichia coli TW10509]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 73/186 (39%), Gaps = 22/186 (11%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G +IPTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVIPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N A +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRMTGDNPDA---PRWLSYPGFVPQLGNNEDSVIFI 196
Query: 228 KEYIGI 233
+ G+
Sbjct: 197 NQLEGL 202
>gi|293409758|ref|ZP_06653334.1| YdcF protein [Escherichia coli B354]
gi|291470226|gb|EFF12710.1| YdcF protein [Escherichia coli B354]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 22/186 (11%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEMPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N + +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRMTGDNPD---APRWLSYPGFVPQLGNNADSVIFV 196
Query: 228 KEYIGI 233
+ G+
Sbjct: 197 NQLQGL 202
>gi|300784315|ref|YP_003764606.1| hypothetical protein AMED_2408 [Amycolatopsis mediterranei U32]
gi|299793829|gb|ADJ44204.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length = 223
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 10/122 (8%)
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYN 135
P + I + T L+ + I+ +G + E++ Y
Sbjct: 23 PRRSDVGIGLGSRDPGVAVHTAELFHAGCF----PLIVFTGANAPTTLERFPRGEAVHYR 78
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQ 193
L+ GV + I +E ++ T +N F+ ++ + + LVS Y +R+ +
Sbjct: 79 EIALDLGVPDEAILVEPEARHTGENIAFTRRLLAERGIAVRTVTLVSRPYQQRRAYATAK 138
Query: 194 HF 195
Sbjct: 139 RL 140
>gi|315619638|gb|EFV00162.1| conserved hypothetical protein [Escherichia coli 3431]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 31/160 (19%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I ++ + + ++ISGG + G AE+ + +
Sbjct: 51 IDAACKIARDQQI-----PLLISGGIGHSTTFLYSAIAQHTHYNTIRTTGRAEATILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQH 194
+ + + I +E QS + +NA+FS +++ + I+V +R+ F+
Sbjct: 106 AHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQDPTMQRRTMATFRR 165
Query: 195 F-GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
G N A +Y +P N + + + + G+
Sbjct: 166 MTGDNPDA---PRWLSYPGFVPQLGNNADSVIFINQLQGL 202
>gi|168235764|ref|ZP_02660822.1| protein YdcF [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194734172|ref|YP_002114666.1| protein YdcF [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194709674|gb|ACF88895.1| protein YdcF [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197291005|gb|EDY30358.1| protein YdcF [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|194472043|ref|ZP_03078027.1| protein YdcF [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194458407|gb|EDX47246.1| protein YdcF [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|197250201|ref|YP_002146392.1| protein YdcF [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197213904|gb|ACH51301.1| protein YdcF [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVISRHPRYHTIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|81300267|ref|YP_400475.1| hypothetical protein Synpcc7942_1458 [Synechococcus elongatus PCC
7942]
gi|81169148|gb|ABB57488.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 188
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 13/117 (11%)
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQN 160
+ Q I +S G + Y + GV R + L+ Q+ DT N
Sbjct: 43 QFAAELAQTHPDLPIWVSSGSNPE--------YAEWVFSQAGVPRSRLHLDYQATDTLSN 94
Query: 161 AQFSSSMIKNMQGKNIILVSSAYHLKRSQ----LYFQHFGINTKASCSDYLNAYYSI 213
+ + +++ LV+S YH++R+ + F GI + A S
Sbjct: 95 FTSLADRFQQQGIQHVYLVTSDYHMRRALVIANIVFASRGITFEPVPVPSDRASESW 151
>gi|213423286|ref|ZP_03356281.1| hypothetical protein Salmonentericaenterica_37857 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 237
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|16764984|ref|NP_460599.1| inner membrane protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167992818|ref|ZP_02573914.1| protein YdcF [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168241197|ref|ZP_02666129.1| protein YdcF [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168462907|ref|ZP_02696838.1| protein YdcF [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|194451261|ref|YP_002045680.1| hypothetical protein SeHA_C1820 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|16420166|gb|AAL20558.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|194409565|gb|ACF69784.1| protein YdcF [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|195634377|gb|EDX52729.1| protein YdcF [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|205329019|gb|EDZ15783.1| protein YdcF [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205339637|gb|EDZ26401.1| protein YdcF [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|261246832|emb|CBG24647.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267993570|gb|ACY88455.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301158168|emb|CBW17665.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912629|dbj|BAJ36603.1| protein YdcF [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321224263|gb|EFX49326.1| Protein ydcF [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323129909|gb|ADX17339.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|332988527|gb|AEF07510.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTSGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|254562029|ref|YP_003069124.1| hypothetical protein METDI3633 [Methylobacterium extorquens DM4]
gi|254269307|emb|CAX25273.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 234
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF-----GINTKASCS 204
L+ ++ +T NA + ++ +++V+S YH+ R+ + +H + S
Sbjct: 110 LDYRARNTIGNAIETRRWMRRHSFGTVVVVTSNYHMPRTLVELRHALKDGETLIPYPVVS 169
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
D L+ + +T L EY+ L+A+ R
Sbjct: 170 DGLDVSRWWADPA----VTRLLGAEYLKFLVAWGRTR 202
>gi|218548938|ref|YP_002382729.1| hypothetical protein EFER_1586 [Escherichia fergusonii ATCC 35469]
gi|218356479|emb|CAQ89102.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 19/154 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEEPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS ++I
Sbjct: 87 QYNTIRTTG-------RAEASILADIAHQFWQIPHEKIWVEDQSTNCGENARFSVALISQ 139
Query: 171 --MQGKNIILVSSAYHLKRSQLYFQHF-GINTKA 201
I+V +R+ F+ G N A
Sbjct: 140 AAQNIHTAIVVQDPTMQRRTMATFRRVTGDNPDA 173
>gi|204927848|ref|ZP_03219049.1| protein YdcF [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|204323190|gb|EDZ08386.1| protein YdcF [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|197263222|ref|ZP_03163296.1| protein YdcF [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197241477|gb|EDY24097.1| protein YdcF [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|332716396|ref|YP_004443862.1| hypothetical protein AGROH133_11928 [Agrobacterium sp. H13-3]
gi|325063081|gb|ADY66771.1| hypothetical protein AGROH133_11928 [Agrobacterium sp. H13-3]
Length = 243
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 83/221 (37%), Gaps = 46/221 (20%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ + C + L +F G L F+ + P G+ I++L G
Sbjct: 32 RGLILLCVITLGAFSG---------GFLWFADSVASMRPPEGAKGDAIIVLTGG------ 76
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN---KL 138
Y RI + + L + + ++ISG +P + +
Sbjct: 77 ------------YQRIEQAVGLLRD----GVGKRLLISGVNPA-TTRTQIRKMTQGSSDM 119
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
V+ + +++DT NA ++S I++ +I++V++ YH+ RS +
Sbjct: 120 FSCCVD-----MGYKAIDTIGNANEAASWIRDHGYSSIVVVTNNYHMHRSLHELHNASPQ 174
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTEL---ALKEYIGILIA 236
T+ ++A + + F ++ L EY+ +IA
Sbjct: 175 TQFIAYPVISA---DLARTNWFAEPDVVRTMLYEYMKFVIA 212
>gi|299133065|ref|ZP_07026260.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
gi|298593202|gb|EFI53402.1| protein of unknown function DUF218 [Afipia sp. 1NLS2]
Length = 202
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 17/129 (13%)
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH---------G 127
P + + S I + L+K+ + I ISG P+
Sbjct: 23 EDEPQPVDLSFVLGSATPSNIDPAIDLFKA----GLTKRIWISGKGPKPRRWRPFKKNKA 78
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM----QGKNIILVSSAY 183
ES +Y +E G+ + I +E +S +T +N FS+ MI+ + + L + Y
Sbjct: 79 EPESRIYQRIAIERGIPAEAIWVEDRSSNTLENFVFSAEMIEAAFGWTNIRTVSLTAKPY 138
Query: 184 HLKRSQLYF 192
H++R +
Sbjct: 139 HMRRVLMTA 147
>gi|16129375|ref|NP_415932.1| conserved SAM-binding protein, DUF218 superfamily [Escherichia coli
str. K-12 substr. MG1655]
gi|89108259|ref|AP_002039.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
gi|170081090|ref|YP_001730410.1| hypothetical protein ECDH10B_1540 [Escherichia coli str. K-12
substr. DH10B]
gi|191165092|ref|ZP_03026936.1| conserved hypothetical protein [Escherichia coli B7A]
gi|238900642|ref|YP_002926438.1| hypothetical protein BWG_1241 [Escherichia coli BW2952]
gi|256022909|ref|ZP_05436774.1| hypothetical protein E4_06029 [Escherichia sp. 4_1_40B]
gi|260855140|ref|YP_003229031.1| hypothetical protein ECO26_2013 [Escherichia coli O26:H11 str.
11368]
gi|260867861|ref|YP_003234263.1| hypothetical protein ECO111_1803 [Escherichia coli O111:H- str.
11128]
gi|300901825|ref|ZP_07119860.1| putative protein YdcF [Escherichia coli MS 84-1]
gi|300922955|ref|ZP_07139027.1| putative protein YdcF [Escherichia coli MS 182-1]
gi|300950295|ref|ZP_07164230.1| putative protein YdcF [Escherichia coli MS 116-1]
gi|300954072|ref|ZP_07166550.1| putative protein YdcF [Escherichia coli MS 175-1]
gi|301017668|ref|ZP_07182341.1| putative protein YdcF [Escherichia coli MS 196-1]
gi|301304933|ref|ZP_07211036.1| putative protein YdcF [Escherichia coli MS 124-1]
gi|301326879|ref|ZP_07220175.1| putative protein YdcF [Escherichia coli MS 78-1]
gi|301647117|ref|ZP_07246939.1| putative protein YdcF [Escherichia coli MS 146-1]
gi|307138063|ref|ZP_07497419.1| hypothetical protein EcolH7_08016 [Escherichia coli H736]
gi|309797128|ref|ZP_07691526.1| putative protein YdcF [Escherichia coli MS 145-7]
gi|331641988|ref|ZP_08343123.1| protein YdcF [Escherichia coli H736]
gi|2506663|sp|P34209|YDCF_ECOLI RecName: Full=Protein ydcF
gi|187609384|pdb|3CA8|A Chain A, Crystal Structure Of Escherichia Coli Ydcf, An
S-Adenosyl-L- Methionine Utilizing Enzyme
gi|187609385|pdb|3CA8|B Chain B, Crystal Structure Of Escherichia Coli Ydcf, An
S-Adenosyl-L- Methionine Utilizing Enzyme
gi|1742305|dbj|BAA15030.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
W3110]
gi|1787683|gb|AAC74496.1| conserved SAM-binding protein, DUF218 superfamily [Escherichia coli
str. K-12 substr. MG1655]
gi|169888925|gb|ACB02632.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
gi|190904864|gb|EDV64569.1| conserved hypothetical protein [Escherichia coli B7A]
gi|238860476|gb|ACR62474.1| conserved protein [Escherichia coli BW2952]
gi|257753789|dbj|BAI25291.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
gi|257764217|dbj|BAI35712.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
gi|260449457|gb|ACX39879.1| protein of unknown function DUF218 [Escherichia coli DH1]
gi|299882706|gb|EFI90917.1| putative protein YdcF [Escherichia coli MS 196-1]
gi|300318931|gb|EFJ68715.1| putative protein YdcF [Escherichia coli MS 175-1]
gi|300406037|gb|EFJ89575.1| putative protein YdcF [Escherichia coli MS 84-1]
gi|300420740|gb|EFK04051.1| putative protein YdcF [Escherichia coli MS 182-1]
gi|300450353|gb|EFK13973.1| putative protein YdcF [Escherichia coli MS 116-1]
gi|300839763|gb|EFK67523.1| putative protein YdcF [Escherichia coli MS 124-1]
gi|300846485|gb|EFK74245.1| putative protein YdcF [Escherichia coli MS 78-1]
gi|301074706|gb|EFK89512.1| putative protein YdcF [Escherichia coli MS 146-1]
gi|308119298|gb|EFO56560.1| putative protein YdcF [Escherichia coli MS 145-7]
gi|309701682|emb|CBJ00989.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
gi|315136054|dbj|BAJ43213.1| hypothetical protein ECDH1ME8569_1357 [Escherichia coli DH1]
gi|315253563|gb|EFU33531.1| putative protein YdcF [Escherichia coli MS 85-1]
gi|323157334|gb|EFZ43450.1| hypothetical protein ECEPECA14_0800 [Escherichia coli EPECa14]
gi|323178106|gb|EFZ63685.1| hypothetical protein ECOK1180_3096 [Escherichia coli 1180]
gi|323937565|gb|EGB33834.1| hypothetical protein ERCG_01250 [Escherichia coli E1520]
gi|323942175|gb|EGB38348.1| hypothetical protein ERDG_01216 [Escherichia coli E482]
gi|323947650|gb|EGB43653.1| hypothetical protein EREG_00714 [Escherichia coli H120]
gi|331038786|gb|EGI11006.1| protein YdcF [Escherichia coli H736]
Length = 266
Score = 59.9 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 22/186 (11%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N + +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRMTGDNPD---APRWLSYPGFVPQLGNNADSVIFI 196
Query: 228 KEYIGI 233
+ G+
Sbjct: 197 NQLQGL 202
>gi|332885995|gb|EGK06239.1| hypothetical protein HMPREF9456_00113 [Dysgonomonas mossii DSM
22836]
Length = 217
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 68/196 (34%), Gaps = 18/196 (9%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ ++++F++ L+ + + K S ++LG
Sbjct: 6 KKRLKRMFWVLSTGLILAVLAILFAN---WKIPHDSKGFVYNEVDSIPPQKAALVLGAAK 62
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
I P+ RI LY + K + ++SG D + E+
Sbjct: 63 N-------IGNRPNLYFTYRIQAAKELYDAGKVQA----FVVSG-DNSRKDYNEADDMRA 110
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
L+E+GV I + L T + M + + I+VS +H +R+ Q++G
Sbjct: 111 ALVEAGVPDSIIHCDYAGLRTLDS---VVRMNEIFGQDSFIIVSQEFHNERAVFLAQNYG 167
Query: 197 INTKASCSDYLNAYYS 212
+ + L+ S
Sbjct: 168 LTAYGYNAKDLSLNRS 183
>gi|295397171|ref|ZP_06807275.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
gi|294974593|gb|EFG50316.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
Length = 193
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
+ R E + L ++ S II+S L +S + + + +G D + E
Sbjct: 49 ASERAGEAVDLLEAGYSRSG--KIIVS-------PLTQSNL--DFYVGAGAPSDALINEG 97
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF----QHFGINTKASCS 204
+ T+ NA+ + M++ + + ++ SS YH+ R+++ + +H+G + +
Sbjct: 98 NATSTYTNARNTLKMMQELGYDSAVITSSDYHMLRTKMIYERQNRHYGFDLTYVAT 153
>gi|322614891|gb|EFY11816.1| hypothetical protein SEEM315_01371 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322619331|gb|EFY16211.1| hypothetical protein SEEM971_04533 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322623143|gb|EFY19985.1| hypothetical protein SEEM973_05401 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322628433|gb|EFY25221.1| hypothetical protein SEEM974_15860 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322634840|gb|EFY31571.1| hypothetical protein SEEM201_18150 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322638595|gb|EFY35290.1| hypothetical protein SEEM202_15285 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641016|gb|EFY37663.1| hypothetical protein SEEM954_07158 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322645401|gb|EFY41929.1| hypothetical protein SEEM054_03604 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322651714|gb|EFY48086.1| hypothetical protein SEEM675_02777 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322654386|gb|EFY50708.1| hypothetical protein SEEM965_10804 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661226|gb|EFY57452.1| hypothetical protein SEEM19N_15417 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322665000|gb|EFY61188.1| hypothetical protein SEEM801_01051 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667744|gb|EFY63904.1| hypothetical protein SEEM507_07464 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671844|gb|EFY67965.1| hypothetical protein SEEM877_03611 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322677110|gb|EFY73174.1| hypothetical protein SEEM867_17879 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680227|gb|EFY76266.1| hypothetical protein SEEM180_05445 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322685344|gb|EFY81340.1| hypothetical protein SEEM600_09479 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323194293|gb|EFZ79489.1| hypothetical protein SEEM581_02069 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198136|gb|EFZ83248.1| hypothetical protein SEEM501_16205 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323204381|gb|EFZ89389.1| hypothetical protein SEEM460_11067 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323205843|gb|EFZ90806.1| hypothetical protein SEEM020_05594 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323217172|gb|EGA01893.1| hypothetical protein SEEM0077_19320 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222857|gb|EGA07215.1| hypothetical protein SEEM0047_12821 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323227248|gb|EGA11418.1| hypothetical protein SEEM0055_06320 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323232032|gb|EGA16139.1| hypothetical protein SEEM0052_16829 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234559|gb|EGA18646.1| hypothetical protein SEEM3312_15520 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238012|gb|EGA22071.1| hypothetical protein SEEM5258_03298 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323243387|gb|EGA27406.1| hypothetical protein SEEM1156_03589 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323248911|gb|EGA32836.1| hypothetical protein SEEM9199_08486 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253695|gb|EGA37522.1| hypothetical protein SEEM8282_11815 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323258729|gb|EGA42388.1| hypothetical protein SEEM8283_04899 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323261761|gb|EGA45331.1| hypothetical protein SEEM8284_09518 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266508|gb|EGA49995.1| hypothetical protein SEEM8285_01000 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323271232|gb|EGA54659.1| hypothetical protein SEEM8287_05287 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 266
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTSGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|194443814|ref|YP_002040888.1| hypothetical protein SNSL254_A1757 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194402477|gb|ACF62699.1| protein YdcF [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
Length = 266
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTSGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|157162562|ref|YP_001459880.1| putative SanA protein [Escherichia coli HS]
gi|157068242|gb|ABV07497.1| putative SanA protein [Escherichia coli HS]
gi|323941817|gb|EGB37996.1| hypothetical protein ERDG_01592 [Escherichia coli E482]
Length = 227
Score = 59.5 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 67/194 (34%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ + C +LL + I +++ Q ++ P +LLG
Sbjct: 13 RRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVG----LLLGA----- 63
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 64 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 111
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
V I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 112 AKDVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDA 168
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 169 IGFNAPDLNMKHGF 182
>gi|300774116|ref|ZP_07083985.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300760287|gb|EFK57114.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 413
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 16/120 (13%)
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD--PQKHGLA 129
LG G P + I P R+ R Y + I++SGG P K
Sbjct: 255 LGAG----PEVYDQPISPGGMLRCRM--AARSY----FQRLAPFIVVSGGRVHPYKTPYI 304
Query: 130 ESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSSAYHL 185
E+I L++ V + I ++ + T N + ++ ++ + K I+ SS H+
Sbjct: 305 EAIEMKKYLMQVLNVPEEAILIDPHARHTTTNMRNTARILLHYGFPAEKYAIVNSSVPHI 364
>gi|110638486|ref|YP_678695.1| hypothetical protein CHU_2090 [Cytophaga hutchinsonii ATCC 33406]
gi|110281167|gb|ABG59353.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length = 241
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/179 (13%), Positives = 60/179 (33%), Gaps = 18/179 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ L + +L+ KI F +F F + + + L +
Sbjct: 1 MVHGFLLKAGFCNLVYMKNWKIR-CILFTSIFYFNACAYVNRRFYTDPDIYFTKALNNAP 59
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ + +++ P P ++ + R+ LY + +I SGG
Sbjct: 60 Y----DALIV--------PGFPHMKDSMTTIVQHRVCWAWYLYSKGIVKN----VIFSGG 103
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
E+ + ++ G+ + + E Q+ + +N +S + K + + +
Sbjct: 104 AVY-TPYREAEIMAMYAVQLGIPAEHVFAEVQAEHSTENLYYSYEIAKAKGFNRVAVGT 161
>gi|289806712|ref|ZP_06537341.1| hypothetical protein Salmonellaentericaenterica_20727 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 227
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|16760247|ref|NP_455864.1| hypothetical protein STY1429 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29141985|ref|NP_805327.1| hypothetical protein t1543 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|168230062|ref|ZP_02655120.1| protein YdcF [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|168819438|ref|ZP_02831438.1| protein YdcF [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|213027889|ref|ZP_03342336.1| hypothetical protein Salmonelentericaenterica_38435 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
gi|213428548|ref|ZP_03361298.1| hypothetical protein SentesTyphi_25271 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213613139|ref|ZP_03370965.1| hypothetical protein SentesTyp_11899 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213648045|ref|ZP_03378098.1| hypothetical protein SentesTy_12599 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213854662|ref|ZP_03382902.1| hypothetical protein SentesT_11414 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289825687|ref|ZP_06544858.1| hypothetical protein Salmonellentericaenterica_09646 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|25371937|pir||AB0665 conserved hypothetical protein STY1429 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16502542|emb|CAD01691.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137614|gb|AAO69176.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|205335350|gb|EDZ22114.1| protein YdcF [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205343645|gb|EDZ30409.1| protein YdcF [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320085867|emb|CBY95642.1| Protein ydcF [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 266
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|168260161|ref|ZP_02682134.1| protein YdcF [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|205350840|gb|EDZ37471.1| protein YdcF [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
Length = 266
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|167549876|ref|ZP_02343634.1| protein YdcF [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|198242299|ref|YP_002215508.1| hypothetical protein SeD_A1699 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|207856863|ref|YP_002243514.1| hypothetical protein SEN1412 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224583869|ref|YP_002637667.1| hypothetical protein SPC_2095 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|197936815|gb|ACH74148.1| protein YdcF [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|205324939|gb|EDZ12778.1| protein YdcF [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|206708666|emb|CAR32991.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224468396|gb|ACN46226.1| hypothetical protein SPC_2095 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|326623254|gb|EGE29599.1| protein YdcF [Salmonella enterica subsp. enterica serovar Dublin
str. 3246]
Length = 266
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE +S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|111219782|ref|YP_710576.1| hypothetical protein FRAAL0286 [Frankia alni ACN14a]
gi|111147314|emb|CAJ58963.1| conserved hypothetical protein [Frankia alni ACN14a]
Length = 219
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 46/144 (31%), Gaps = 10/144 (6%)
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVY 134
P I I S T LY M I+ +G + E++ Y
Sbjct: 26 DPRPTDIGIGLGSHDLSVATCTATLYH----RRMFPRIVFTGANAPTTIATFPRGEAVHY 81
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYF 192
L V I +E + +T +N + ++ +++ L+S Y +R+
Sbjct: 82 REHALTLNVPDTAILVEPTARNTGENITRTRELLTAHGITPRSVTLISRPYQQRRAYATC 141
Query: 193 QHFGINTKASCSDYLNAYYSIIPL 216
+ + C+ + +
Sbjct: 142 RKLWPDVDVLCASQPMSLDDYMAS 165
>gi|260169411|ref|ZP_05756222.1| hypothetical protein BruF5_13857 [Brucella sp. F5/99]
Length = 177
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 50/150 (33%), Gaps = 31/150 (20%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P + IV+L G SR+ + L K + ++I
Sbjct: 3 PPVLSEPAEAIVVLTGG------------------QSRVKAGINLLKEKRGK----RLLI 40
Query: 119 SGGDP--QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
SG P + L + + L ++ D +L+T N S I+ +
Sbjct: 41 SGVHPSTNEEALQRATHADKSLFACCIDLDR-----TALNTVGNVAESERWIRANDYHRV 95
Query: 177 ILVSSAYHLKRSQLYF--QHFGINTKASCS 204
I+V++ YH+ RS L + +
Sbjct: 96 IVVTNNYHIPRSILEMSSRMKDVEFIPYPV 125
>gi|124024346|ref|YP_001018653.1| hypothetical protein P9303_26581 [Prochlorococcus marinus str. MIT
9303]
gi|123964632|gb|ABM79388.1| Conserved hypothetical protein [Prochlorococcus marinus str. MIT
9303]
Length = 213
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 66/175 (37%), Gaps = 44/175 (25%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+S + + LLF I G + Y++ L + K +I++LG
Sbjct: 2 RSWCRPGPIVVVGLLFWLIAAGPL---------RPYRQALTN---GKPPQLILVLGG--- 46
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
R +RL + ++ +++SGG ++ Y
Sbjct: 47 ---------------DVDREHLGIRLARD-----LNLPLVVSGGS--------NLEYAQW 78
Query: 138 LL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ E G+ ++L+ ++ DT N ++ ++++LV+S HL RS
Sbjct: 79 LVREVGIPPSQVQLDYRAKDTLGNFTSLVDELQLKGIQHVLLVTSEDHLPRSMAV 133
>gi|300931974|ref|ZP_07147271.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300460397|gb|EFK23890.1| conserved hypothetical protein [Escherichia coli MS 187-1]
Length = 230
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 68/194 (35%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ ++C +LL + I +++ Q ++ P +LLG
Sbjct: 16 RRTLKIACLLLLVAGATILIADRVMVNASKQLTWNDVNAVPARNVG----LLLGA----- 66
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 114
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
V I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 115 AKSVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDA 171
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 172 IGFNAPDLNMKHGF 185
>gi|218701857|ref|YP_002409486.1| putative thioredoxin-like [Escherichia coli IAI39]
gi|300916707|ref|ZP_07133423.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|218371843|emb|CAR19698.1| putative thioredoxin-like [Escherichia coli IAI39]
gi|300416002|gb|EFJ99312.1| conserved hypothetical protein [Escherichia coli MS 115-1]
Length = 227
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ + C +LL + I +++ Q ++ P +LLG
Sbjct: 13 RRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWNDVNAVPARNVG----LLLGA----- 63
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 64 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 111
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 112 AKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDA 168
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 169 IGFNAPDLNMKHGF 182
>gi|194439812|ref|ZP_03071878.1| putative SanA protein [Escherichia coli 101-1]
gi|194421260|gb|EDX37281.1| putative SanA protein [Escherichia coli 101-1]
gi|323961045|gb|EGB56661.1| hypothetical protein ERGG_02513 [Escherichia coli H489]
gi|323970147|gb|EGB65420.1| hypothetical protein ERHG_03763 [Escherichia coli TA007]
Length = 230
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 68/194 (35%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ ++C +LL + I +++ Q ++ P +LLG
Sbjct: 16 RRTLKIACLLLLVAGATILIADRVMVNASKQLTWNDVNAVPARNVG----LLLGA----- 66
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 114
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
V I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 115 AKSVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDA 171
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 172 IGFNAPDLNMKHGF 185
>gi|327254060|gb|EGE65689.1| hypothetical protein ECSTEC7V_1491 [Escherichia coli STEC_7v]
Length = 266
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 22/186 (11%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N A +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRITGDNPDA---PRWLSYPGFVPQLGNNEDSVIFI 196
Query: 228 KEYIGI 233
+ G+
Sbjct: 197 NQLEGL 202
>gi|257054292|ref|YP_003132124.1| hypothetical protein Svir_02150 [Saccharomonospora viridis DSM
43017]
gi|256584164|gb|ACU95297.1| uncharacterized conserved protein [Saccharomonospora viridis DSM
43017]
Length = 225
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 54/168 (32%), Gaps = 9/168 (5%)
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
P + I L+ + + T + + E+ Y +
Sbjct: 29 APRRSDVGIGLGSHDLGVAEHAATLFHEGRFELLVFTGATTATTARLFPRGEAAHYRERA 88
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHFG 196
LE GV D + +E + +T +N +F+ ++ + + LV YH +R+ +
Sbjct: 89 LELGVPDDAVLVEPHARNTGENIRFTRRLLADSGITVRTATLVCKPYHQRRAYATTRKQW 148
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG----ILIAYYRG 240
CS + + + +G IL+ RG
Sbjct: 149 PELDVHCSAERITLDEYM---DAIGDADRVVHMLVGETQRILVYARRG 193
>gi|167724441|ref|ZP_02407677.1| hypothetical protein BpseD_35807 [Burkholderia pseudomallei DM98]
Length = 111
Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY-QRPLLSP 60
LL+ + L+ + + F IG G++P LL+ LQ Y RP +
Sbjct: 5 LLTVVALVAVLLRFTKRRRASRALFVATVAAFFAIGCGLVPAWLLRALQAPYAARPAIE- 63
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ N IV+LG GT I A+ P SYSR+ E LY+ C++
Sbjct: 64 --WGERNAIVMLGLGTEKIAATGAVE--PGTFSYSRVVEAASLYRDCRRARA 111
>gi|153831572|ref|ZP_01984239.1| conserved hypothetical protein [Vibrio harveyi HY01]
gi|148872082|gb|EDL70899.1| conserved hypothetical protein [Vibrio harveyi HY01]
Length = 278
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 49/132 (37%), Gaps = 22/132 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
++++LG + + S + SR+ + + ++ GG Q
Sbjct: 6 VVIILG--------KRLVHDKLSAEGRSRVEALSNVLNELCFDTTA--LVFCGGITQSQT 55
Query: 128 LAESIVYNNKLLES------GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN------ 175
++E+ + +E +SL+T QN Q +++ +
Sbjct: 56 VSEADAMYGYFRHLMEVKGVDFPEQQVIIENRSLNTVQNMQNAAAELLQSGLCQTGQTIE 115
Query: 176 IILVSSAYHLKR 187
+ L+S+ YHL+R
Sbjct: 116 VTLLSNDYHLER 127
>gi|295133482|ref|YP_003584158.1| hypothetical protein ZPR_1627 [Zunongwangia profunda SM-A87]
gi|294981497|gb|ADF51962.1| conserved hypothetical protein [Zunongwangia profunda SM-A87]
Length = 411
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 16/122 (13%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD--PQKH 126
I++LGNG P R + ++ ++L I++SGG P +
Sbjct: 248 ILILGNG----PENYTDR----LSALGKLN--IKLGVKAYLEVKAPLIVVSGGHAHPFRA 297
Query: 127 GLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ---GKNIILVSSA 182
E+I +L+ E + + I +E + T N + +S + K ++V++
Sbjct: 298 KYCEAIEMKKELMKEYQIPENRIIIEPHARHTTTNLRNASRLYSKYDVPLDKAHLVVTNN 357
Query: 183 YH 184
H
Sbjct: 358 SH 359
>gi|284041055|ref|YP_003390985.1| hypothetical protein Slin_6227 [Spirosoma linguale DSM 74]
gi|283820348|gb|ADB42186.1| protein of unknown function DUF218 [Spirosoma linguale DSM 74]
Length = 420
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 13/129 (10%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
Q ++ + +P K IV+ GNG P + + P + R+ + Y+
Sbjct: 238 QKAFVQVKSTPWTKYTYAAIVVPGNG----PELATTPLSPLNK--MRLDMVVSRYRKRWA 291
Query: 110 HSMHCTIIISGGD--PQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSS 166
II+SGG P + E+I N L++ + I ++ + T N + ++
Sbjct: 292 PF----IILSGGYCYPFRGPYGEAIEMKNYLMQKHGIPESAILIDPHARHTTTNFRNANR 347
Query: 167 MIKNMQGKN 175
++
Sbjct: 348 LMIRYGFPT 356
>gi|218706710|ref|YP_002414229.1| putative thioredoxin-like [Escherichia coli UMN026]
gi|293406697|ref|ZP_06650623.1| SanA protein [Escherichia coli FVEC1412]
gi|298382440|ref|ZP_06992037.1| ygjQ protein [Escherichia coli FVEC1302]
gi|300901472|ref|ZP_07119555.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|218433807|emb|CAR14724.1| putative thioredoxin-like [Escherichia coli UMN026]
gi|291426703|gb|EFE99735.1| SanA protein [Escherichia coli FVEC1412]
gi|298277580|gb|EFI19096.1| ygjQ protein [Escherichia coli FVEC1302]
gi|300355110|gb|EFJ70980.1| conserved hypothetical protein [Escherichia coli MS 198-1]
Length = 227
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHL-QFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ + C +LL + I +++ Q ++ P +LLG
Sbjct: 13 RRTLKIGCLLLLIAGATIFIADRVMVNTSKQLTWSDVNAVPARNVG----LLLGA----- 63
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 64 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 111
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 112 AKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDA 168
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 169 IGFNAPDLNMKHGF 182
>gi|240139618|ref|YP_002964094.1| hypothetical protein MexAM1_META1p3069 [Methylobacterium extorquens
AM1]
gi|240009591|gb|ACS40817.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
Length = 234
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF-----GINTKASCS 204
L+ ++ +T NA + ++ +++V+S YH+ R+ + +H + S
Sbjct: 110 LDYRARNTIGNAIETRRWMRRHSFGTVVVVTSNYHMPRTLVELRHALKDGETLIPYPVVS 169
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
D L+ + +T L EY+ L+A+ R
Sbjct: 170 DGLDVSRWWADPA----VTRLLGAEYLKFLVAWGRTR 202
>gi|15801729|ref|NP_287747.1| hypothetical protein Z2308 [Escherichia coli O157:H7 EDL933]
gi|15831274|ref|NP_310047.1| hypothetical protein ECs2020 [Escherichia coli O157:H7 str. Sakai]
gi|168748985|ref|ZP_02774007.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|168756058|ref|ZP_02781065.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|168763093|ref|ZP_02788100.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|168769459|ref|ZP_02794466.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|168777189|ref|ZP_02802196.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|168782907|ref|ZP_02807914.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|168788299|ref|ZP_02813306.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|168799687|ref|ZP_02824694.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|195938035|ref|ZP_03083417.1| hypothetical protein EscherichcoliO157_16647 [Escherichia coli
O157:H7 str. EC4024]
gi|208811195|ref|ZP_03253028.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208815193|ref|ZP_03256372.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208821439|ref|ZP_03261759.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209395974|ref|YP_002270426.1| hypothetical protein ECH74115_2020 [Escherichia coli O157:H7 str.
EC4115]
gi|217329232|ref|ZP_03445312.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|254792962|ref|YP_003077799.1| hypothetical protein ECSP_1896 [Escherichia coli O157:H7 str.
TW14359]
gi|261224361|ref|ZP_05938642.1| hypothetical protein EscherichiacoliO157_07125 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261257385|ref|ZP_05949918.1| hypothetical protein EscherichiacoliO157EcO_16402 [Escherichia coli
O157:H7 str. FRIK966]
gi|291282519|ref|YP_003499337.1| hypothetical protein G2583_1776 [Escherichia coli O55:H7 str.
CB9615]
gi|12515295|gb|AAG56361.1|AE005364_6 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13361486|dbj|BAB35443.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|187767512|gb|EDU31356.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|188016545|gb|EDU54667.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|188999657|gb|EDU68643.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|189356855|gb|EDU75274.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|189361524|gb|EDU79943.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|189366643|gb|EDU85059.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|189371868|gb|EDU90284.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|189377915|gb|EDU96331.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|208724701|gb|EDZ74409.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208731841|gb|EDZ80529.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208741562|gb|EDZ89244.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209157374|gb|ACI34807.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4115]
gi|209771178|gb|ACI83901.1| hypothetical protein ECs2020 [Escherichia coli]
gi|209771180|gb|ACI83902.1| hypothetical protein ECs2020 [Escherichia coli]
gi|209771182|gb|ACI83903.1| hypothetical protein ECs2020 [Escherichia coli]
gi|209771184|gb|ACI83904.1| hypothetical protein ECs2020 [Escherichia coli]
gi|209771186|gb|ACI83905.1| hypothetical protein ECs2020 [Escherichia coli]
gi|217317671|gb|EEC26099.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|254592362|gb|ACT71723.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
gi|290762392|gb|ADD56353.1| hypothetical protein G2583_1776 [Escherichia coli O55:H7 str.
CB9615]
gi|320190128|gb|EFW64779.1| Protein ydcF [Escherichia coli O157:H7 str. EC1212]
gi|320637014|gb|EFX06875.1| hypothetical protein ECO5101_21386 [Escherichia coli O157:H7 str.
G5101]
gi|320642381|gb|EFX11667.1| hypothetical protein ECO9389_24816 [Escherichia coli O157:H- str.
493-89]
gi|320647737|gb|EFX16482.1| hypothetical protein ECO2687_10633 [Escherichia coli O157:H- str. H
2687]
gi|320653344|gb|EFX21481.1| hypothetical protein ECO7815_21008 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659011|gb|EFX26634.1| hypothetical protein ECO5905_03211 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320663844|gb|EFX31072.1| hypothetical protein ECOSU61_09304 [Escherichia coli O157:H7 str.
LSU-61]
gi|326340712|gb|EGD64509.1| Protein ydcF [Escherichia coli O157:H7 str. 1044]
gi|326340964|gb|EGD64757.1| Protein ydcF [Escherichia coli O157:H7 str. 1125]
Length = 266
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 72/186 (38%), Gaps = 22/186 (11%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRMTGDNPD---VPRWLSYPGFVPQLGNNADSVIFI 196
Query: 228 KEYIGI 233
+ G+
Sbjct: 197 NQLQGL 202
>gi|163852283|ref|YP_001640326.1| hypothetical protein Mext_2865 [Methylobacterium extorquens PA1]
gi|163663888|gb|ABY31255.1| protein of unknown function DUF218 [Methylobacterium extorquens
PA1]
Length = 283
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF-----GINTKASCS 204
L+ ++ +T NA + ++ +++V+S YH+ R+ + +H + S
Sbjct: 159 LDYRARNTIGNAIETRRWMRRHSFGTVVVVTSNYHMPRTLVELRHALKDGETLIPYPVVS 218
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
D L+ + +T L EY+ L+A+ R
Sbjct: 219 DGLDVSRWWADPA----VTRLLGAEYLKFLVAWGRTR 251
>gi|16130981|ref|NP_417557.1| conserved protein, SanA family, DUF218 superfamily [Escherichia
coli str. K-12 substr. MG1655]
gi|89109855|ref|AP_003635.1| predicted thioredoxin-like [Escherichia coli str. K-12 substr.
W3110]
gi|170082628|ref|YP_001731948.1| thioredoxin-like protein [Escherichia coli str. K-12 substr. DH10B]
gi|188493858|ref|ZP_03001128.1| putative SanA protein [Escherichia coli 53638]
gi|238902196|ref|YP_002927992.1| putative thioredoxin-like protein [Escherichia coli BW2952]
gi|253772079|ref|YP_003034910.1| hypothetical protein ECBD_0656 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254038256|ref|ZP_04872314.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
gi|254163032|ref|YP_003046140.1| putative thioredoxin-like protein [Escherichia coli B str. REL606]
gi|256024335|ref|ZP_05438200.1| predicted thioredoxin-like protein [Escherichia sp. 4_1_40B]
gi|297518029|ref|ZP_06936415.1| predicted thioredoxin-like protein [Escherichia coli OP50]
gi|300950697|ref|ZP_07164588.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300958477|ref|ZP_07170615.1| hypothetical protein HMPREF9547_04190 [Escherichia coli MS 175-1]
gi|301644788|ref|ZP_07244763.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|307139773|ref|ZP_07499129.1| predicted thioredoxin-like protein [Escherichia coli H736]
gi|331643784|ref|ZP_08344915.1| conserved hypothetical protein [Escherichia coli H736]
gi|1176123|sp|P42598|YGJQ_ECOLI RecName: Full=Uncharacterized protein ygjQ
gi|606024|gb|AAA57887.1| ORF_o230 [Escherichia coli str. K-12 substr. MG1655]
gi|1789468|gb|AAC76121.1| conserved protein, SanA family, DUF218 superfamily [Escherichia
coli str. K-12 substr. MG1655]
gi|85675886|dbj|BAE77136.1| predicted thioredoxin-like [Escherichia coli str. K12 substr.
W3110]
gi|169890463|gb|ACB04170.1| predicted thioredoxin-like protein [Escherichia coli str. K-12
substr. DH10B]
gi|188489057|gb|EDU64160.1| putative SanA protein [Escherichia coli 53638]
gi|226839880|gb|EEH71901.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
gi|238863133|gb|ACR65131.1| predicted thioredoxin-like protein [Escherichia coli BW2952]
gi|242378634|emb|CAQ33422.1| conserved protein [Escherichia coli BL21(DE3)]
gi|253323123|gb|ACT27725.1| protein of unknown function DUF218 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974933|gb|ACT40604.1| predicted thioredoxin-like protein [Escherichia coli B str. REL606]
gi|253979089|gb|ACT44759.1| predicted thioredoxin-like protein [Escherichia coli BL21(DE3)]
gi|260447880|gb|ACX38302.1| protein of unknown function DUF218 [Escherichia coli DH1]
gi|300314873|gb|EFJ64657.1| hypothetical protein HMPREF9547_04190 [Escherichia coli MS 175-1]
gi|300449993|gb|EFK13613.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|301076942|gb|EFK91748.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|309703516|emb|CBJ02856.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
gi|315137678|dbj|BAJ44837.1| putative thioredoxin-like protein [Escherichia coli DH1]
gi|323935914|gb|EGB32209.1| hypothetical protein ERCG_02677 [Escherichia coli E1520]
gi|331037255|gb|EGI09479.1| conserved hypothetical protein [Escherichia coli H736]
gi|332345042|gb|AEE58376.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 230
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 69/194 (35%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ ++C +LL + I +++ Q ++ P +LLG
Sbjct: 16 RRTLKIACLLLLVAGATILIADRVMVNASKQLTWSDVNAVPARNVG----LLLGA----- 66
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 114
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 115 AKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDA 171
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 172 IGFNAPDLNMKHGF 185
>gi|218555654|ref|YP_002388567.1| putative thioredoxin-like [Escherichia coli IAI1]
gi|256018999|ref|ZP_05432864.1| putative thioredoxin-like protein [Shigella sp. D9]
gi|260869837|ref|YP_003236239.1| putative thioredoxin-like protein [Escherichia coli O111:H- str.
11128]
gi|293449423|ref|ZP_06663844.1| ygjQ protein [Escherichia coli B088]
gi|300818854|ref|ZP_07099060.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300821683|ref|ZP_07101829.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300905768|ref|ZP_07123502.1| hypothetical protein HMPREF9536_03759 [Escherichia coli MS 84-1]
gi|301301868|ref|ZP_07208002.1| hypothetical protein HMPREF9347_00430 [Escherichia coli MS 124-1]
gi|307310291|ref|ZP_07589939.1| protein of unknown function DUF218 [Escherichia coli W]
gi|331669890|ref|ZP_08370735.1| conserved hypothetical protein [Escherichia coli TA271]
gi|331679161|ref|ZP_08379833.1| conserved hypothetical protein [Escherichia coli H591]
gi|332280096|ref|ZP_08392509.1| conserved hypothetical protein [Shigella sp. D9]
gi|218362422|emb|CAR00046.1| putative thioredoxin-like [Escherichia coli IAI1]
gi|257766193|dbj|BAI37688.1| predicted thioredoxin-like protein [Escherichia coli O111:H- str.
11128]
gi|291322513|gb|EFE61942.1| ygjQ protein [Escherichia coli B088]
gi|300402367|gb|EFJ85905.1| hypothetical protein HMPREF9536_03759 [Escherichia coli MS 84-1]
gi|300525821|gb|EFK46890.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300528639|gb|EFK49701.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300842849|gb|EFK70609.1| hypothetical protein HMPREF9347_00430 [Escherichia coli MS 124-1]
gi|306909186|gb|EFN39681.1| protein of unknown function DUF218 [Escherichia coli W]
gi|315062392|gb|ADT76719.1| predicted thioredoxin-like [Escherichia coli W]
gi|315257002|gb|EFU36970.1| SanA protein [Escherichia coli MS 85-1]
gi|323377020|gb|ADX49288.1| protein of unknown function DUF218 [Escherichia coli KO11]
gi|331062803|gb|EGI34717.1| conserved hypothetical protein [Escherichia coli TA271]
gi|331073226|gb|EGI44549.1| conserved hypothetical protein [Escherichia coli H591]
gi|332102448|gb|EGJ05794.1| conserved hypothetical protein [Shigella sp. D9]
Length = 227
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ + C +LL + I +++ Q ++ P +LLG
Sbjct: 13 RRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVG----LLLGA----- 63
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 64 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 111
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 112 AKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDA 168
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 169 IGFNAPDLNMKHGF 182
>gi|219120159|ref|XP_002180824.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407540|gb|EEC47476.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 334
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 72/180 (40%), Gaps = 24/180 (13%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSC-------KQHSMHCTII-I 118
++I++LG G P + ++ + + +L + S I+ +
Sbjct: 75 DVILVLGGGVPSSLDSPPVYVQRRCDDAAAVVSRHQLLPATFSKKSTKPVSSKSLPILCL 134
Query: 119 SGG--------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS-SMIK 169
S G + ES L + ++ +ET S DT NA ++ S
Sbjct: 135 SAGTAHLPQLLSANGLPIWESTSSAAYLEQKH-NIQNVFVETTSYDTIGNAFYARTSHTD 193
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQ-HFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
+ + +++V++ +H+ RS+ F+ FGI+ S+ Y S + L+E AL+
Sbjct: 194 IVGWRKLLVVTNEFHMDRSKAIFEWIFGID-----SEKRAGYELYFLSSLDGDLSEEALR 248
>gi|324112073|gb|EGC06051.1| hypothetical protein ERIG_03041 [Escherichia fergusonii B253]
Length = 230
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 71/200 (35%), Gaps = 25/200 (12%)
Query: 11 SYWHLLCQS--IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
++ L + R+ ++C +LL + I + + ++ ++
Sbjct: 4 AFARLFRRVCFSRRTLKIACLLLLVAGATI-FIADRAMVNASKQLTWSDVNAVPARNVG- 61
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+LLG P R RI LY + K +++SG + +K+
Sbjct: 62 -LLLGA-------RPGNRY-----FTRRIDTAAELYHAGKVKW----LLVSGDNGRKN-Y 103
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ L+ GV I + T + + + +I ++S +H +R+
Sbjct: 104 DEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRA 160
Query: 189 QLYFQHFGINTKASCSDYLN 208
+ +GI+ + LN
Sbjct: 161 IWLAKQYGIDAIGFNAPDLN 180
>gi|331684739|ref|ZP_08385331.1| conserved hypothetical protein [Escherichia coli H299]
gi|320195248|gb|EFW69877.1| SanA protein [Escherichia coli WV_060327]
gi|331078354|gb|EGI49560.1| conserved hypothetical protein [Escherichia coli H299]
Length = 227
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHL-QFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ + C +LL + I +++ Q ++ P +LLG
Sbjct: 13 RRTLKIGCLLLLIAGATIFIADRVMVNTSKQLTWSDVSAVPARNVG----LLLGA----- 63
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 64 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 111
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 112 AKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDA 168
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 169 IGFNAPDLNMKHGF 182
>gi|113954722|ref|YP_731790.1| hypothetical protein sync_2602 [Synechococcus sp. CC9311]
gi|113882073|gb|ABI47031.1| Uncharacterized conserved protein [Synechococcus sp. CC9311]
Length = 195
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 18/127 (14%)
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES- 141
P RI R +RL + + +++SGG + Y L+
Sbjct: 36 PPQRILVLGGDLDRERVGLRLAQQ-----LELPLVVSGGSNPE--------YAQWLVRDA 82
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ----LYFQHFGI 197
G+++ + L+ ++ DTF N +K K+I LV+S HL R+ L GI
Sbjct: 83 GLDQSRVVLDYRAKDTFTNFTSLVDDLKRDGVKHIYLVTSEDHLPRAMTVGRLVAGSRGI 142
Query: 198 NTKASCS 204
Sbjct: 143 RLTGVPV 149
>gi|134098017|ref|YP_001103678.1| hypothetical protein SACE_1431 [Saccharopolyspora erythraea NRRL
2338]
gi|291007218|ref|ZP_06565191.1| hypothetical protein SeryN2_22077 [Saccharopolyspora erythraea NRRL
2338]
gi|133910640|emb|CAM00753.1| hypothetical protein SACE_1431 [Saccharopolyspora erythraea NRRL
2338]
Length = 222
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLET 152
+ LY + I+ +G + E++ Y + LE GV I +E
Sbjct: 46 ADQVADLYHAGYF----PLIVFTGANAPTTVERFPRGEAVHYRERALELGVPDAAIVVEP 101
Query: 153 QSLDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQLYFQH 194
++ +T +N +++ ++ + M+ +++++V Y +R+ +H
Sbjct: 102 RATNTGENIEYTRQVLAGRRMEVRSLLMVCKPYQQRRAYATAKH 145
>gi|228472898|ref|ZP_04057655.1| SanA protein [Capnocytophaga gingivalis ATCC 33624]
gi|228275480|gb|EEK14257.1| SanA protein [Capnocytophaga gingivalis ATCC 33624]
Length = 206
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 73/211 (34%), Gaps = 24/211 (11%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
F+L +G +I + + + + +LLG G +
Sbjct: 2 FFILFALLLGIVVIHNANSTIHKNAEGKLYTEVDSIPKNKVALLLGTGKYLKDG------ 55
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
+P+ R+ L+K+ K I+ISG D + G E L+ G+
Sbjct: 56 QPNLYFRYRVEAAAALFKAQKVDF----ILISG-DNSRQGYDEPTDMKEALVAMGIPEGK 110
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
I L+ T + + + + +VS A+H +R+ + +GI C+ +
Sbjct: 111 IYLDYAGFRTLDSVVRAKEIFD---LTALTVVSQAFHDERAIYLAEKYGIKAIGFCARDV 167
Query: 208 NAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ Y + L+EY ++
Sbjct: 168 DKYSGMKTR----------LREYFARAKVFW 188
>gi|168209439|ref|ZP_02635064.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
gi|168212314|ref|ZP_02637939.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
gi|170712354|gb|EDT24536.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
gi|170716134|gb|EDT28316.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
Length = 199
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYF 192
L + V + I +E +S +T +NA FS + ++ K+ IL A+H +R+ + +
Sbjct: 84 KEVLFRNDVPLESILVENKSTNTSENAFFSRKVTDDLNIEVKSAILCCQAFHARRALITY 143
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ Y+ + N++ ++ + +G L
Sbjct: 144 SLA----YPNTQFYVVPVETQGISKDNWHKSDYGINRVLGEL 181
>gi|255039525|ref|YP_003090146.1| hypothetical protein Dfer_5793 [Dyadobacter fermentans DSM 18053]
gi|254952281|gb|ACT96981.1| protein of unknown function DUF218 [Dyadobacter fermentans DSM
18053]
Length = 225
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 13/133 (9%)
Query: 49 LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCK 108
L S + + + I++ P P + RI LY
Sbjct: 2 LYRSAAKAFTKGAKEAPYDAIIV--------PGFPYNGEKWDMVHQLRIHWAYYLYSKGY 53
Query: 109 QHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ +I SGG + ES V N G+ R+ + E ++ + +N +S +
Sbjct: 54 TKN----VIFSGGAVATPYI-ESRVMANYAEALGIPREHLFTEEKAQHSTENVYYSYRLA 108
Query: 169 KNMQGKNIILVSS 181
K K I L +
Sbjct: 109 KERGFKKIALSTD 121
>gi|209967333|ref|YP_002300248.1| hypothetical protein RC1_4097 [Rhodospirillum centenum SW]
gi|209960799|gb|ACJ01436.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 244
Score = 59.1 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/223 (15%), Positives = 70/223 (31%), Gaps = 43/223 (19%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+F + + + F G + L P P+ + + IV+L G+
Sbjct: 35 ALFGGALTLAVAWFAGLFLFAAGL----------PRTPPEDDRQTDAIVVLTGGS----- 79
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
R+ L ++ + + + + G + L S
Sbjct: 80 -------------ERLAAGFELLRAHRARKLFISGVYRG-----------VDVQELLRLS 115
Query: 142 GVERDD----IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
D I L + DT NA ++ ++ +++ +V++ YH+ RS + F+
Sbjct: 116 RQAPGDLECCIVLGYAADDTEGNAAETALWVRQEGFRSLRVVTANYHMPRSLVEFRRALP 175
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ L + EY L+A+ R
Sbjct: 176 EVDLIAHPVAPPNVRLEHWWRWPGTASLIVGEYNKFLLAWTRA 218
>gi|160885715|ref|ZP_02066718.1| hypothetical protein BACOVA_03719 [Bacteroides ovatus ATCC 8483]
gi|156108528|gb|EDO10273.1| hypothetical protein BACOVA_03719 [Bacteroides ovatus ATCC 8483]
Length = 211
Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 18/142 (12%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI T+ LYK+ K I+ISG D +K E L++ G+ I L+
Sbjct: 69 RILATVELYKAGKIKY----ILISG-DNRKEDYNEPEEMKKALMQKGIPEKSIYLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T + + + + ++S +H +R+ + GI+ + +NAY +
Sbjct: 124 RTLDSVVRAKEV---FGQNRLTIISQRFHNERAIYLAEKNGIDAIGYNAPNVNAYAGLKT 180
Query: 216 LSANFYLTELALKEYIGILIAY 237
++E + + +
Sbjct: 181 N----------IRELLARVKMF 192
>gi|320533701|ref|ZP_08034320.1| hypothetical protein HMPREF9057_02210 [Actinomyces sp. oral taxon
171 str. F0337]
gi|320134096|gb|EFW26425.1| hypothetical protein HMPREF9057_02210 [Actinomyces sp. oral taxon
171 str. F0337]
Length = 265
Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 63/179 (35%), Gaps = 17/179 (9%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+L + +R + L + T+ H++ + + + ++LG
Sbjct: 38 VLRRLLRFSLAAMGVVTLLAAGASIWAWTVSAGHIEVAGE--DSGDGEAVRAPVAIVLGA 95
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
+PS R+ LY S + + I++SG D ++ G E V
Sbjct: 96 AVHAD-------GQPSPWLAHRLDVAADLYTSGRVEA----ILVSG-DNRRAGYDEPTVM 143
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
LL G+ + ++ DT+ + + + +LV+ +H R+ +
Sbjct: 144 RRYLLSQGIPDQAVAVDYAGFDTYDTCVRARRV---FGIERALLVTQDFHEPRAVAICR 199
>gi|331682861|ref|ZP_08383480.1| protein YdcF [Escherichia coli H299]
gi|331080492|gb|EGI51671.1| protein YdcF [Escherichia coli H299]
Length = 266
Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 22/180 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEMPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N + +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRMTGDNPD---APRWLSYPGFVPQLGNNADSVIFV 196
>gi|301017764|ref|ZP_07182414.1| putative protein YdcF [Escherichia coli MS 69-1]
gi|300399975|gb|EFJ83513.1| putative protein YdcF [Escherichia coli MS 69-1]
Length = 266
Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 22/180 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEMPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N + +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRMTGDNPD---APRWLSYPGFVPQLGNNADSVIFV 196
>gi|56413434|ref|YP_150509.1| inner membrane protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197362357|ref|YP_002141994.1| inner membrane protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|56127691|gb|AAV77197.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197093834|emb|CAR59317.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 435
Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 61/182 (33%), Gaps = 44/182 (24%)
Query: 35 FIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
F + + + + S + + +VL GN + P+ +
Sbjct: 6 FPALSAATLLAVNTVGQWLAQNDFSGEQPYSSDCVVLAGN-----------AVIPTIDAA 54
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGG-------------------DPQKHGLAESIVYN 135
RI + ++ISGG + G AE+ +
Sbjct: 55 CRIAKA-----------QGVPLLISGGISHSTPFLYAVIARHPRYHTIRTTGRAEAAILA 103
Query: 136 NKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYF 192
+ + + + I LE +S + +NA+FS ++I+ + I+V +R+ F
Sbjct: 104 DIANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIATF 163
Query: 193 QH 194
+
Sbjct: 164 RR 165
>gi|331664700|ref|ZP_08365605.1| conserved hypothetical protein [Escherichia coli TA143]
gi|331057948|gb|EGI29930.1| conserved hypothetical protein [Escherichia coli TA143]
Length = 227
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 68/193 (35%), Gaps = 23/193 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ + C +LL + I ++ + ++ ++ +LLG
Sbjct: 13 RRTLKIGCLLLLIAG-ATLFIADRVMVNTSKQLTWSDVNAVPARNVG--LLLGA------ 63
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 64 -RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIA 112
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 113 KGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDAI 169
Query: 201 ASCSDYLNAYYSI 213
+ LN +
Sbjct: 170 GFNAPNLNMKHGF 182
>gi|75906523|ref|YP_320819.1| hypothetical protein Ava_0298 [Anabaena variabilis ATCC 29413]
gi|75700248|gb|ABA19924.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 232
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 53/176 (30%), Gaps = 41/176 (23%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++ +L GW II TI L + +LG
Sbjct: 18 RKKWRLIQKLVGVLCLVLGGWLIITTITLVFASSQPP------------DAFFVLGG--- 62
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
S R ++ K I+IS G P
Sbjct: 63 ---------------SIRREIYIAQIAKQY----PQIPILISQGSPDP-------CIKLI 96
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ ++ LE + TF+N + ++K+ + L++S HL R++ Q
Sbjct: 97 FEREAADLSNVWLEKCANSTFENFYYGVPILKSWGVHKVRLITSPTHLPRAKWMAQ 152
>gi|316936202|ref|YP_004111184.1| hypothetical protein Rpdx1_4910 [Rhodopseudomonas palustris DX-1]
gi|315603916|gb|ADU46451.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
DX-1]
Length = 241
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 76/217 (35%), Gaps = 37/217 (17%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
++ L F + G + L L + +P +++ IV+L G+
Sbjct: 28 IVAVLALGFVAVAGGFVA--FLAQLHSAELQP------RRNAEGIVVLTGGS-------- 71
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG--GDPQKHGLAESIVYNNKLLESG 142
SR+ + + L + ++ISG ++ S+ ++
Sbjct: 72 ----------SRVSDAVELLAAGYGR----RLLISGVHRTNGARDISRSVPESSDWFSCC 117
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V+ D ++DT NA + ++ +++I+V+S YH+ R+ + +
Sbjct: 118 VDLDR-----SAVDTRSNAAETRRWVRERGFRSLIVVTSNYHMPRAIAEMSDAMPDVELI 172
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ + P + L L EY L R
Sbjct: 173 PFAVIGDKWRDEPWWTSGGTLRLLLSEYAKYLAVELR 209
>gi|215488415|ref|YP_002330846.1| predicted thioredoxin-like [Escherichia coli O127:H6 str. E2348/69]
gi|312968569|ref|ZP_07782778.1| sanA [Escherichia coli 2362-75]
gi|215266487|emb|CAS10926.1| predicted thioredoxin-like [Escherichia coli O127:H6 str. E2348/69]
gi|312286787|gb|EFR14698.1| sanA [Escherichia coli 2362-75]
Length = 230
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 73/205 (35%), Gaps = 27/205 (13%)
Query: 12 YWHLLCQS--IRKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNI 68
+ HLL + R+ + C +LL + I +++ Q ++ P
Sbjct: 5 FAHLLLRICFSRRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVG--- 61
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+LLG P R RI LY + K +++SG + +K+
Sbjct: 62 -LLLGA-------RPGNRY-----FTRRIDSAAELYHAGKVKW----LLVSGDNGRKN-Y 103
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E+ L+ GV I + T + + + +I ++S +H +R+
Sbjct: 104 DEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRA 160
Query: 189 QLYFQHFGINTKASCSDYLNAYYSI 213
+ +GI+ + LN +
Sbjct: 161 IWLAKQYGIDAIGFNAPDLNMKHGF 185
>gi|331659378|ref|ZP_08360320.1| conserved hypothetical protein [Escherichia coli TA206]
gi|315297783|gb|EFU57057.1| conserved hypothetical protein [Escherichia coli MS 16-3]
gi|331053960|gb|EGI25989.1| conserved hypothetical protein [Escherichia coli TA206]
Length = 230
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 23/188 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ + C +LL + I ++ + ++ ++ +LLG
Sbjct: 16 RRTLKIGCLLLLIAG-ATLFIADRVMVNASQQLTWSDVNAVPTRNVG--LLLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 -RPGNRY-----FTRRIDTAAELYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + ++ + +I ++S +H +R+ + +GI+
Sbjct: 116 KGVPAKAIFCDYAGFSTLDSVVRANKVFSEN---HITIISQEFHNQRAIWLAKQYGIDAI 172
Query: 201 ASCSDYLN 208
+ LN
Sbjct: 173 GFNAPDLN 180
>gi|218691389|ref|YP_002399601.1| putative thioredoxin-like [Escherichia coli ED1a]
gi|218428953|emb|CAR09902.2| putative thioredoxin-like [Escherichia coli ED1a]
Length = 230
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 23/188 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ + C +LL + I ++ + ++ ++ +LLG
Sbjct: 16 RRTLKIGCLLLLIAG-ATLFIADRVMVNASQQLTWSDVNAVPARNVG--LLLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 -RPGNRY-----FTRRIDTAAELYHAGKVKW----LLVSGDNGRKN-YDEAPGMQQALIA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + ++ + +I ++S +H +R+ + +GI+
Sbjct: 116 KGVPAKAIFCDYAGFSTLDSVVRANKVFSEN---HITIISQEFHNQRAIWLAKQYGIDAI 172
Query: 201 ASCSDYLN 208
+ LN
Sbjct: 173 GFNAPDLN 180
>gi|194431622|ref|ZP_03063913.1| putative SanA protein [Shigella dysenteriae 1012]
gi|194419978|gb|EDX36056.1| putative SanA protein [Shigella dysenteriae 1012]
gi|320177710|gb|EFW52699.1| SanA protein [Shigella boydii ATCC 9905]
gi|332086758|gb|EGI91896.1| hypothetical protein SD15574_3621 [Shigella dysenteriae 155-74]
Length = 230
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 69/194 (35%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ ++C +LL + I +++ Q ++ P +LLG
Sbjct: 16 RRTLKIACLLLLVAGATIFIADRVMVNASKQLTWSDVNAVPARNVG----LLLGA----- 66
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 114
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 115 AKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDA 171
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 172 IGFNAPDLNMKHGF 185
>gi|156976129|ref|YP_001447035.1| hypothetical protein VIBHAR_04900 [Vibrio harveyi ATCC BAA-1116]
gi|156527723|gb|ABU72808.1| hypothetical protein VIBHAR_04900 [Vibrio harveyi ATCC BAA-1116]
Length = 278
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 12/84 (14%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLES------GVERDDIKLETQSLDTFQNAQFSSSMIK 169
++ GG Q ++E+ + +E +SL+T QN Q +++ +
Sbjct: 44 LVFCGGITQSQTVSEADAMYGYFRHLMEVKGVDFPEQQVIIENRSLNTVQNMQNAAAELL 103
Query: 170 NMQGKN------IILVSSAYHLKR 187
+ L+S+ YHL+R
Sbjct: 104 QSGLCQTGQTIEVTLLSNDYHLER 127
>gi|325497371|gb|EGC95230.1| hypothetical protein ECD227_1468 [Escherichia fergusonii ECD227]
Length = 266
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 19/154 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G +IPTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVIPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI I+G AE+ + + + + + I +E QS + +NA+FS ++I
Sbjct: 87 QYNTIRITG-------RAEASILADIAHQFWQIPHEKIWVEDQSTNCGENARFSVALISQ 139
Query: 171 --MQGKNIILVSSAYHLKRSQLYFQH-FGINTKA 201
I+V +R+ F G N A
Sbjct: 140 AAQNIHTAIVVQDPTMQRRTMATFHRVAGDNPDA 173
>gi|288923137|ref|ZP_06417284.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
gi|288345508|gb|EFC79890.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
Length = 220
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 41/123 (33%), Gaps = 10/123 (8%)
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVY 134
P I + S LY + I+ +G + E++ Y
Sbjct: 27 DPQPTDIGVGLGSHDLSVATCAAALYH----RGLFPRIVFTGANAPTTIDTFPRGEAVHY 82
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYF 192
L V I +ET + +T +N + ++ +++ L+S Y +R+
Sbjct: 83 REHALTLHVPDAAILIETTARNTGENITRTRDLLTTHGITPRSVTLISRPYQQRRAYATC 142
Query: 193 QHF 195
+
Sbjct: 143 RKL 145
>gi|261212370|ref|ZP_05926655.1| conserved hypothetical protein [Vibrio sp. RC341]
gi|260838301|gb|EEX64957.1| conserved hypothetical protein [Vibrio sp. RC341]
Length = 287
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 22/132 (16%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I ++LG + + + SR+ E + C ++ ++ GG Q+
Sbjct: 7 IFIVLG--------KRLNSDQLTLEGKSRV-EGLISALQCHENQTAL-VVFCGGVTQRQS 56
Query: 128 LAESIVYNNKL------LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI----- 176
+E+ L + + LE QS T +N + + ++ +
Sbjct: 57 ASEAQRMYEYFQTRCQQLALSLPHVQVLLEQQSTSTVENIEHVAQLLLTSGHLRVGDTLT 116
Query: 177 -ILVSSAYHLKR 187
LVS+ YHLKR
Sbjct: 117 LTLVSNDYHLKR 128
>gi|324113238|gb|EGC07213.1| hypothetical protein ERIG_01656 [Escherichia fergusonii B253]
Length = 266
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 19/154 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEEPYQADCVIL--AGNAVMPTIDAACKIAKEQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ T+ +G AE+ + + + + + I +E QS + +NA+FS ++I
Sbjct: 87 QYNTVRTTG-------KAEASILADIAHQFWQIPHEKIWVEDQSTNCGENARFSVALISQ 139
Query: 171 --MQGKNIILVSSAYHLKRSQLYFQHF-GINTKA 201
I+V +R+ F+ G N A
Sbjct: 140 AAQNIHTAIVVQDPTMQRRTMATFRRVTGDNPDA 173
>gi|78213897|ref|YP_382676.1| hypothetical protein Syncc9605_2389 [Synechococcus sp. CC9605]
gi|78198356|gb|ABB36121.1| conserved hypothetical protein [Synechococcus sp. CC9605]
Length = 191
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 62/187 (33%), Gaps = 46/187 (24%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ + L+ +G G + Y+R LL + ++++LG
Sbjct: 5 RTGLLLGAGLMVWLLGPGPLS---------PYRRALLDRSPPQ---LVLVLGG------- 45
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
R RL + + +++SGG +++ + L E
Sbjct: 46 -----------DVDRERLGARLARQ-----LDLPLLVSGGSNREY----AEWM---LSEE 82
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL----YFQHFGI 197
D + L+ ++ DT N ++ ++++LV+S HL RS GI
Sbjct: 83 RFNPDRVTLDYRARDTLSNFTSVVDELQADGVRHVLLVTSEDHLPRSMAVGQVVAGSRGI 142
Query: 198 NTKASCS 204
Sbjct: 143 QLSGVPV 149
>gi|298293358|ref|YP_003695297.1| hypothetical protein Snov_3404 [Starkeya novella DSM 506]
gi|296929869|gb|ADH90678.1| protein of unknown function DUF218 [Starkeya novella DSM 506]
Length = 228
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 60/186 (32%), Gaps = 42/186 (22%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
Q + + IV+L G RI + L + + T
Sbjct: 56 QTARRADGIVVLTGG------------------AERITDATNLLVEGRGTRLLIT----- 92
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLE------TQSLDTFQNAQFSSSMIKNMQGK 174
G LAE + V LE +L+T NA ++ + + +
Sbjct: 93 GVHPDTTLAE--------IGRTVPATRESLECCVELGRAALNTRGNAIETAQWAREHRFR 144
Query: 175 NIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
++++V+SA+H+ R+ + + + + A+ L EY+
Sbjct: 145 SLLVVTSAWHMPRALVELRRALPDVELVPYPVVPKRGPENW---EASLANVRLLFVEYVK 201
Query: 233 ILIAYY 238
+ A+
Sbjct: 202 FIGAWL 207
>gi|260174422|ref|ZP_05760834.1| putative protein involved in barrier function of the cell envelope
[Bacteroides sp. D2]
gi|315922690|ref|ZP_07918930.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313696565|gb|EFS33400.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 211
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 18/142 (12%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI T+ LYK+ K I+ISG D +K E L++ G+ I L+
Sbjct: 69 RILATVELYKAGKIKY----ILISG-DNRKEDYNEPEEMKKALMQKGIPEKSIYLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T + + + ++ ++S +H +R+ + GI+ + +NAY +
Sbjct: 124 RTLDSVVRAKEV---FGQNHLTIISQRFHNERAIYLAEKNGIDAIGYNAPNVNAYAGLKT 180
Query: 216 LSANFYLTELALKEYIGILIAY 237
++E + + +
Sbjct: 181 N----------IRELLARVKMF 192
>gi|218531041|ref|YP_002421857.1| hypothetical protein Mchl_3091 [Methylobacterium chloromethanicum
CM4]
gi|218523344|gb|ACK83929.1| protein of unknown function DUF218 [Methylobacterium
chloromethanicum CM4]
Length = 234
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF-----GINTKASCS 204
L+ ++ +T NA + ++ +++V+S YH+ R+ + +H + S
Sbjct: 110 LDYRARNTIGNAIETRRWMRRHSFGTVVVVTSNYHMPRTLVELRHALKDGETLIPYPVVS 169
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
D L+ + +T L EY+ L+A+ R
Sbjct: 170 DGLDVSRWWADPA----VTRLLGAEYLKFLVAWGRTR 202
>gi|82544159|ref|YP_408106.1| hypothetical protein SBO_1673 [Shigella boydii Sb227]
gi|81245570|gb|ABB66278.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|320185743|gb|EFW60498.1| Protein ydcF [Shigella flexneri CDC 796-83]
gi|332095472|gb|EGJ00489.1| hypothetical protein SB359474_1931 [Shigella boydii 3594-74]
Length = 280
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 72/186 (38%), Gaps = 22/186 (11%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS ++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALFNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N + +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRMTGDNPD---APRWLSYPGFVPQLGNNADSVIFI 196
Query: 228 KEYIGI 233
+ G+
Sbjct: 197 NQLQGL 202
>gi|317051966|ref|YP_004113082.1| hypothetical protein Selin_1799 [Desulfurispirillum indicum S5]
gi|316947050|gb|ADU66526.1| protein of unknown function DUF218 [Desulfurispirillum indicum S5]
Length = 305
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 9/129 (6%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++VLLG E S + R K+ + T G
Sbjct: 6 TLVVLLG-------NENDEAGELSETAILRAQAAAEYVKAHADCLVLPTGAF-GDHFNTS 57
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS-SSMIKNMQGKNIILVSSAYHL 185
+ LL GV D I T+S +T ++A ++ + + +++SA+H+
Sbjct: 58 ATPHGKLLALYLLGQGVSPDRILPSTKSSNTLEDAFGVLRALTSLAGIERVHIITSAFHM 117
Query: 186 KRSQLYFQH 194
R++ F
Sbjct: 118 PRTRFIFGR 126
>gi|83859181|ref|ZP_00952702.1| hypothetical protein OA2633_12290 [Oceanicaulis alexandrii
HTCC2633]
gi|83852628|gb|EAP90481.1| hypothetical protein OA2633_12290 [Oceanicaulis alexandrii
HTCC2633]
Length = 191
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 64/193 (33%), Gaps = 40/193 (20%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ ++ F+LL +F+ + F Q +P G IV+L G
Sbjct: 7 RFLRLTAFILLTAFV---------VGFALFVRQARTFTPDASVRGQAIVVLTGG------ 51
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK--LL 139
+R+ L + ++ISG +P + L
Sbjct: 52 ------------PNRVSTAAALLQDGSGR----RLLISGVNPDSPPADIAAAAGASQALF 95
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GI 197
E V+ Q+ DT NA +++ + II+V+S YH+ R+ L Q +
Sbjct: 96 ECCVDFGL-----QAADTIGNAAETAAWARQHGYDRIIVVTSDYHMPRALLELQAAMPDV 150
Query: 198 NTKASCSDYLNAY 210
A +
Sbjct: 151 RLVAYGVPAPAPW 163
>gi|254390034|ref|ZP_05005255.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|326442061|ref|ZP_08216795.1| hypothetical protein SclaA2_13396 [Streptomyces clavuligerus ATCC
27064]
gi|197703742|gb|EDY49554.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 220
Score = 58.3 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 12/137 (8%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAE 130
G T P AI + LY + + ++ SGG+ E
Sbjct: 24 GHTPRPCSAAIGL--GSHDLGVATAAAGLYHA----GLFPVVVFSGGNSPTTAARFPRGE 77
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRS 188
++ Y GV I LE ++ +T QN FS ++ +++L++ Y +R+
Sbjct: 78 AVHYREHARALGVPDAAILLEARAANTGQNIAFSREVLSTAGTGVDSLLLIAKPYMERRA 137
Query: 189 QLYFQHFGINTKASCSD 205
+ C+
Sbjct: 138 YATCRKLWPEADVVCAS 154
>gi|218246780|ref|YP_002372151.1| hypothetical protein PCC8801_1957 [Cyanothece sp. PCC 8801]
gi|257059822|ref|YP_003137710.1| hypothetical protein Cyan8802_1984 [Cyanothece sp. PCC 8802]
gi|218167258|gb|ACK65995.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8801]
gi|256589988|gb|ACV00875.1| protein of unknown function DUF218 [Cyanothece sp. PCC 8802]
Length = 200
Score = 58.3 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 11/119 (9%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
E R + I +S G P+ + ++GVERD + L+ Q+ DT
Sbjct: 60 ERERFAAQLAKDHPTLPIWVSSGSPKGY-------AKRIFAKAGVERDRLHLDYQAKDTV 112
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ----LYFQHFGINTKASCSDYLNAYYSI 213
N + K ++ LV+S HL R++ + F GI K +
Sbjct: 113 TNFTTLVNEFKAQGIDSVYLVTSKNHLPRARVIGEIIFGSQGIVIKPMAVECDRPPEPW 171
>gi|269968233|ref|ZP_06182262.1| SanA protein [Vibrio alginolyticus 40B]
gi|269827156|gb|EEZ81461.1| SanA protein [Vibrio alginolyticus 40B]
Length = 244
Score = 58.3 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/235 (14%), Positives = 79/235 (33%), Gaps = 29/235 (12%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHL-QFSYQRPLLSPQWK 63
+F + L S ++ + L + I ++ + + PQ +
Sbjct: 1 MLFSRIRSKWKLKFSWKRFALILSISALSLLVSVIAIDRWVVLQAKESIFTEYEQIPQHE 60
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
V+LG I + RI + LY K ++SG +
Sbjct: 61 VA----VVLGTSKYIGKILNTYYTH-------RINAAIELYNQGKVKQ----FLLSGDNA 105
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E LL++GV + I L+ T + + + + + ++V+ +
Sbjct: 106 -HRSYNEPWTMKRDLLKAGVPEEVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVTQRF 161
Query: 184 HLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
H +R+ + I+ + ++ +AN T + ++E + + A+
Sbjct: 162 HCERALFIADAYSIDAQ---------CLAVAGPTANKQKTSMRVRELLARVKAFL 207
>gi|191172218|ref|ZP_03033761.1| putative SanA protein [Escherichia coli F11]
gi|300977564|ref|ZP_07173964.1| hypothetical protein HMPREF9553_01084 [Escherichia coli MS 200-1]
gi|190907528|gb|EDV67124.1| putative SanA protein [Escherichia coli F11]
gi|300308254|gb|EFJ62774.1| hypothetical protein HMPREF9553_01084 [Escherichia coli MS 200-1]
gi|324008841|gb|EGB78060.1| hypothetical protein HMPREF9532_01443 [Escherichia coli MS 57-2]
gi|324012056|gb|EGB81275.1| hypothetical protein HMPREF9533_03948 [Escherichia coli MS 60-1]
Length = 230
Score = 58.3 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 23/188 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ + C +LL + I ++ + ++ ++ +LLG
Sbjct: 16 RRTLKIGCLLLLIAG-ATLFIADRVMVNASQQLTWSDVNAVPARNVG--LLLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 -RPGNRY-----FTRRIDTAAELYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + ++ + +I ++S +H +R+ + +GI+
Sbjct: 116 KGVPAKAIFCDYAGFSTLDSVVRANKVFSEN---HITIISQEFHNQRAIWLAKQYGIDAI 172
Query: 201 ASCSDYLN 208
+ LN
Sbjct: 173 GFNAPDLN 180
>gi|163759927|ref|ZP_02167011.1| putative transmembrane protein [Hoeflea phototrophica DFL-43]
gi|162282885|gb|EDQ33172.1| putative transmembrane protein [Hoeflea phototrophica DFL-43]
Length = 220
Score = 58.3 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 29/141 (20%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
L +P D + IV+L G Y RI + + L + + +
Sbjct: 37 LKAPGTSVDVDAIVVLTGG------------------YQRIEQALALLED----GIGDRL 74
Query: 117 IISGGDPQKHGLA--ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+ISG +P A + + + V+ + Q+LDT NA ++ I+
Sbjct: 75 LISGVNPSTSSAALRRATGTQSATFDCCVD-----IGYQALDTIGNANETADWIRQNNYV 129
Query: 175 NIILVSSAYHLKRSQLYFQHF 195
+++V++ YH+ RS +
Sbjct: 130 RVLVVTNNYHMPRSLMELSQA 150
>gi|156974318|ref|YP_001445225.1| hypothetical protein VIBHAR_02033 [Vibrio harveyi ATCC BAA-1116]
gi|156525912|gb|ABU70998.1| hypothetical protein VIBHAR_02033 [Vibrio harveyi ATCC BAA-1116]
Length = 244
Score = 58.3 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 64/196 (32%), Gaps = 18/196 (9%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+F + L S +++ + LL + I ++ Q +
Sbjct: 1 MLFSRIKSNWKLKFSWKRLALVLSISLLGLLVTVIAIDRWVVLQAQEEIFTDYEQVPEHE 60
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
V+LG I + RI + LYK K ++SG +
Sbjct: 61 VA---VVLGTSKYIGKILNTYYTH-------RINAAIELYKQGKVKQ----FLLSGDNA- 105
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E LL +GV + I L+ T + + + + + ++V+ +H
Sbjct: 106 HRSYNEPWTMKRDLLRAGVPEEVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVTQRFH 162
Query: 185 LKRSQLYFQHFGINTK 200
+R+ + I+ +
Sbjct: 163 CERALFIADAYNIDAQ 178
>gi|294813532|ref|ZP_06772175.1| DUF218 domain-containing protein [Streptomyces clavuligerus ATCC
27064]
gi|294326131|gb|EFG07774.1| DUF218 domain-containing protein [Streptomyces clavuligerus ATCC
27064]
Length = 233
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 12/137 (8%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAE 130
G T P AI + LY + + ++ SGG+ E
Sbjct: 37 GHTPRPCSAAIGL--GSHDLGVATAAAGLYHA----GLFPVVVFSGGNSPTTAARFPRGE 90
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRS 188
++ Y GV I LE ++ +T QN FS ++ +++L++ Y +R+
Sbjct: 91 AVHYREHARALGVPDAAILLEARAANTGQNIAFSREVLSTAGTGVDSLLLIAKPYMERRA 150
Query: 189 QLYFQHFGINTKASCSD 205
+ C+
Sbjct: 151 YATCRKLWPEADVVCAS 167
>gi|260362436|ref|ZP_05775388.1| SanA protein [Vibrio parahaemolyticus K5030]
gi|260878380|ref|ZP_05890735.1| SanA protein [Vibrio parahaemolyticus AN-5034]
gi|260899033|ref|ZP_05907474.1| SanA protein [Vibrio parahaemolyticus Peru-466]
gi|260903412|ref|ZP_05911807.1| SanA protein [Vibrio parahaemolyticus AQ4037]
gi|308088640|gb|EFO38335.1| SanA protein [Vibrio parahaemolyticus Peru-466]
gi|308091255|gb|EFO40950.1| SanA protein [Vibrio parahaemolyticus AN-5034]
gi|308107629|gb|EFO45169.1| SanA protein [Vibrio parahaemolyticus AQ4037]
gi|308115571|gb|EFO53111.1| SanA protein [Vibrio parahaemolyticus K5030]
gi|328473012|gb|EGF43860.1| SanA protein [Vibrio parahaemolyticus 10329]
Length = 224
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 64/178 (35%), Gaps = 24/178 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ V+LG I T+ RI + LYK K ++SG
Sbjct: 34 DQIPQHEVAVVLGTSKYIGKTLNTYYTH-------RINAAIELYKQGKVKQ----FLLSG 82
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ E LL++GV + I L+ T + + + + + ++V+
Sbjct: 83 DNA-HRSYNEPWTMKRDLLKAGVPEEVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVT 138
Query: 181 SAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+H +R+ + I+ + ++ +AN T + ++E + + A+
Sbjct: 139 QRFHCERALFIADAYNIDAQ---------CLAVAGPTANKQKTSMRIRELLARVKAFL 187
>gi|301021896|ref|ZP_07185857.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|300397812|gb|EFJ81350.1| conserved hypothetical protein [Escherichia coli MS 69-1]
Length = 191
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ GV I +
Sbjct: 37 RIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKGVPAKVIFCDYAGF 91
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + +I ++S +H +R+ + +GI+ + LN +
Sbjct: 92 STLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGF 146
>gi|92113364|ref|YP_573292.1| hypothetical protein Csal_1238 [Chromohalobacter salexigens DSM
3043]
gi|91796454|gb|ABE58593.1| protein of unknown function DUF218 [Chromohalobacter salexigens DSM
3043]
Length = 237
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 53/151 (35%), Gaps = 22/151 (14%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
+R+ +L + +++SG D + E I L V DD+ L+
Sbjct: 80 ARMEAAAQLLRLGHVRH----LLLSG-DNRTRYYNEPIAMWRALRARNVASDDMTLDYAG 134
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
TF + + + ++++LVS A+HL R+ G+ +
Sbjct: 135 FSTFDSVVRARRI---FGVEHVLLVSQAWHLPRALFIADAAGLKAQGCAVPGGKVSGEW- 190
Query: 215 PLSANFYLTELALKEYIGILIA----YYRGN 241
+L L+E++ A Y G
Sbjct: 191 ---------QLWLREWLARAAAVGDLYLWGR 212
>gi|319409380|emb|CBI83024.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 225
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 77/228 (33%), Gaps = 41/228 (17%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++ +L FI +I + + L P + I++L G
Sbjct: 30 RFYKRFSRYVPLTVLALFITILLIGATFVTFSEK--IEHLTPPNPLPQADAIIVLTGGE- 86
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG--GDPQKHGLAESIVYN 135
+RI L + + ++ISG + L ++ N
Sbjct: 87 -----------------NRIKTGFDLLQ----KGLGSRLLISGVNSTIDLNKLIDATYIN 125
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ-- 193
LL V R D E + +T NA+ S++ IK K + +V+ YH+ RS L +
Sbjct: 126 PHLL---VSRVDFGYE--ATNTKGNAEESAAWIKQHNYKTVYIVTHDYHMVRSLLELKYL 180
Query: 194 --HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
H + ++ I + + EYI + Y R
Sbjct: 181 MPHIDFIAYPIKENTTGSWIKQI------NQMRILVSEYIKNIGVYIR 222
>gi|290559808|gb|EFD93132.1| hypothetical protein BJBARM5_0144 [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 184
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 71/188 (37%), Gaps = 52/188 (27%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG R+ + + L K K+ ++I+G + +
Sbjct: 13 AIVVLGGSCDRFK--------------KRLEKGIELQKQQKE----ALLLIAGQNIHSN- 53
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-----------------N 170
+ L+ +D E QS++T NA+ + M+K N
Sbjct: 54 --------DDLMNMLSGNEDFIYENQSINTLDNAENAYMMLKAINKNQMDNSLYNSLQYN 105
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+++ +V+ H+ R++ YF+ +T+ +++ IP N L + + E
Sbjct: 106 GGVRDVYIVTDTLHMIRAKRYFKRT-FDTE------FELHFNSIPEDQN-DLPKKIIYEL 157
Query: 231 IGILIAYY 238
G L+++
Sbjct: 158 SGYLVSFL 165
>gi|290558827|gb|EFD92220.1| protein of unknown function DUF218 [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 184
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 71/188 (37%), Gaps = 52/188 (27%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG R+ + + L K K+ ++I+G + +
Sbjct: 13 AIVVLGGSCDRFK--------------KRLEKGIELQKQQKE----ALLLIAGQNIHSN- 53
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK-----------------N 170
+ L+ +D E QS++T NA+ + M+K N
Sbjct: 54 --------DDLMNMLSGNEDFIYENQSINTLDNAENAYMMLKAINKNQMDNSLYNSLQYN 105
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+++ +V+ H+ R++ YF+ +T+ +++ IP N L + + E
Sbjct: 106 GGVRDVYIVTDTLHMIRAKRYFKRT-FDTE------FELHFNSIPEDQN-DLPKKIIYEL 157
Query: 231 IGILIAYY 238
G L+++
Sbjct: 158 SGYLVSFL 165
>gi|332091251|gb|EGI96340.1| hypothetical protein SB521682_1700 [Shigella boydii 5216-82]
Length = 178
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 48/115 (41%), Gaps = 7/115 (6%)
Query: 123 PQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILV 179
+ G AE+ + + + + + I +E QS + +NA+FS +++ + I+V
Sbjct: 14 VRTTGRAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVV 73
Query: 180 SSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
+R+ F+ G N + +Y +P N + + + + G+
Sbjct: 74 QDPTMQRRTMATFRRMTGDNPD---APRWLSYPGFVPQLGNNADSVIFINQLKGL 125
>gi|260589645|ref|ZP_05855558.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
gi|260539885|gb|EEX20454.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
Length = 200
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 55/167 (32%), Gaps = 26/167 (15%)
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG------GD----------P 123
P + P E +LY + I+ SG G
Sbjct: 19 PEKSDVIFIPGSGFPQLAEEAAKLYHQ----GLVPYILPSGRYSVLNGKFAGVQEKKELY 74
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--NMQGKNIILVSS 181
E L ++ V + I E ++ T++NA +S + M+ K IL
Sbjct: 75 DGEYETEWEFLKEVLKKNHVSEEHILREDKATYTYENAIYSRKVTDCLGMEIKKAILCCK 134
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
YH +RS LY+Q ++ N+YLTE ++
Sbjct: 135 PYHARRSLLYYQLL----YPETQFFVRPIQDSDVKRENWYLTEKGIR 177
>gi|237719439|ref|ZP_04549920.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293370232|ref|ZP_06616792.1| putative protein SanA [Bacteroides ovatus SD CMC 3f]
gi|299146199|ref|ZP_07039267.1| SanA protein [Bacteroides sp. 3_1_23]
gi|229451299|gb|EEO57090.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292634729|gb|EFF53258.1| putative protein SanA [Bacteroides ovatus SD CMC 3f]
gi|298516690|gb|EFI40571.1| SanA protein [Bacteroides sp. 3_1_23]
Length = 214
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 18/142 (12%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI T+ LYK+ K I+ISG D +K E L++ G+ I L+
Sbjct: 69 RILATVELYKAGKIKY----ILISG-DNRKEDYNEPEEMKKALIQKGIPEKFIYLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T + + + + ++S +H +R+ + GI+ + +NAY +
Sbjct: 124 RTLDSVVRAKEV---FGQNRLTIISQRFHNERAIYLAEKNGIDAIGYNAQNVNAYAGLKT 180
Query: 216 LSANFYLTELALKEYIGILIAY 237
++E + + +
Sbjct: 181 N----------IRELLARVKMF 192
>gi|148252746|ref|YP_001237331.1| hypothetical protein BBta_1178 [Bradyrhizobium sp. BTAi1]
gi|146404919|gb|ABQ33425.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 221
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 74/212 (34%), Gaps = 47/212 (22%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ F+ FIG+ L L+ + +P ++ + IV+L G+
Sbjct: 11 ATLAIGFFVAAVGFIGF-------LSQLRGAEIKP------ERKADGIVVLTGGS----- 52
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH--GLAESIVYNNKLL 139
SR+ + + L ++ISG P + S+ +
Sbjct: 53 -------------SRVSDAVELLAGGYGR----RLLISGVHPTNEASDITRSLPEARSFI 95
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GI 197
V+ L+ +++T NA + K++I+V+S YH+ R+ + H +
Sbjct: 96 NCCVD-----LDYSAINTRSNAAQTRRWAAERGFKSLIVVTSNYHMPRAIVELSHAMPSL 150
Query: 198 NTKASCS---DYLNAYYSIIPLSANFYLTELA 226
+ + + + + L+E A
Sbjct: 151 DLIPYAVVGEKWRDEPWWTSGPTLRLLLSEYA 182
>gi|170018663|ref|YP_001723617.1| hypothetical protein EcolC_0614 [Escherichia coli ATCC 8739]
gi|169753591|gb|ACA76290.1| protein of unknown function DUF218 [Escherichia coli ATCC 8739]
Length = 227
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 67/189 (35%), Gaps = 25/189 (13%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ + C +LL + I +++ Q ++ P +LLG
Sbjct: 13 RRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVG----LLLGA----- 63
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 64 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 111
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 112 TKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDA 168
Query: 200 KASCSDYLN 208
+ LN
Sbjct: 169 IGFNAPDLN 177
>gi|323452767|gb|EGB08640.1| hypothetical protein AURANDRAFT_25809 [Aureococcus anophagefferens]
Length = 271
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 50/126 (39%), Gaps = 9/126 (7%)
Query: 97 IFETMRLYKSCKQHSMHCTIII-----SGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
+ + LY + H + + SG + E+ V+ ++ +GV D + +E
Sbjct: 87 ADKAVELYDAGMGHYICFSGGFGAGPHSGANLNGWTRPEADVFADRARAAGVPEDAVLVE 146
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKN--IILVSSAYHLKRSQLYFQHF--GINTKASCSDYL 207
+ +T +N +FS++++ +I+V + KRS G + + +
Sbjct: 147 NAATNTGENCRFSAALLDRAGRARGSLIVVQKPFMEKRSYATLLKQWPGKTPRVAVTSPS 206
Query: 208 NAYYSI 213
++
Sbjct: 207 ISFMDY 212
>gi|227539963|ref|ZP_03970012.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227240241|gb|EEI90256.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 413
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 15/116 (12%)
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG--DPQKHGLA 129
LG G P + I P R+ R Y + I++SGG P K
Sbjct: 255 LGAG----PEVYDQPISPGGMLRCRM--AARSY----FQGLAPFIVVSGGCVHPYKTRYI 304
Query: 130 ESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSA 182
E+I L++ V + I ++ + T N + ++ ++ + +V+S+
Sbjct: 305 EAIEMKKYLMQVLNVPEEAILIDPHARHTTTNMRNTARILLHYGFPTDKYAIVNSS 360
>gi|218440733|ref|YP_002379062.1| hypothetical protein PCC7424_3813 [Cyanothece sp. PCC 7424]
gi|218173461|gb|ACK72194.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7424]
Length = 194
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 11/119 (9%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
E R + I +S G P + +GV D + L+ ++ DT
Sbjct: 56 ERERFAAHLAAKNPQLPIWVSSGSPSNY-------VKRIFANAGVNSDRLHLDYKAKDTV 108
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY----FQHFGINTKASCSDYLNAYYSI 213
N +K ++ L++S H++R+++ F GI K S
Sbjct: 109 TNFTTLVDKLKAQGIDSVYLITSENHMRRARIIGEIVFGSRGIIIKPVAVPSDAPSESW 167
>gi|110806968|ref|YP_690488.1| hypothetical protein SFV_3127 [Shigella flexneri 5 str. 8401]
gi|110616516|gb|ABF05183.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|332998695|gb|EGK18291.1| hypothetical protein SFVA6_3977 [Shigella flexneri VA-6]
gi|332999851|gb|EGK19435.1| hypothetical protein SFK272_3936 [Shigella flexneri K-272]
gi|333000191|gb|EGK19774.1| hypothetical protein SFK218_4113 [Shigella flexneri K-218]
gi|333015721|gb|EGK35060.1| hypothetical protein SFK227_3624 [Shigella flexneri K-227]
Length = 230
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 69/194 (35%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ ++C +LL + I +++ Q ++ P +LLG
Sbjct: 16 RRTLKIACLLLLVAGATIFIADRVMVNASKQLTWGDVNAVPARNVG----LLLGA----- 66
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 114
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 115 AKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDA 171
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 172 IGFNAPDLNMKHGF 185
>gi|198277059|ref|ZP_03209590.1| hypothetical protein BACPLE_03267 [Bacteroides plebeius DSM 17135]
gi|198269557|gb|EDY93827.1| hypothetical protein BACPLE_03267 [Bacteroides plebeius DSM 17135]
Length = 220
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 67/186 (36%), Gaps = 14/186 (7%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L + +KI +S + +F I+ + L + + I +LLG
Sbjct: 4 LSKHTKKIILVSVAICIFPLTMILILACHIYVELVSRNHTYAFVSKIPER-KIGLLLG-- 60
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
I + Y+RI T+ LYK+ K I+ISG D + +E +
Sbjct: 61 ---TNPISRYTKRRNPFYYNRINATVDLYKAGKIK----KILISG-DNRHKSYSEPDLMK 112
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L++ G+ DI L+ T + +K ++S +H R+
Sbjct: 113 GDLIKQGIPEQDIHLDYAGFRTLDS---VVRAVKVFGLSEFTVISQKFHNARAICLANWQ 169
Query: 196 GINTKA 201
G++
Sbjct: 170 GVDAIG 175
>gi|261316090|ref|ZP_05955287.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261305116|gb|EEY08613.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
Length = 136
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 11/125 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 19 PLTIIFLLVAIGLLAAWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 78
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG G + + + RI ETMRL + I++
Sbjct: 79 LPQ---HVDGIIVLG-GYMNGEIVAGRQNFELNSAADRIVETMRLARLY----PDAKILV 130
Query: 119 SGGDP 123
SGG+
Sbjct: 131 SGGEG 135
>gi|115526818|ref|YP_783729.1| hypothetical protein RPE_4830 [Rhodopseudomonas palustris BisA53]
gi|115520765|gb|ABJ08749.1| protein of unknown function DUF218 [Rhodopseudomonas palustris
BisA53]
Length = 233
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 19/168 (11%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + P A I SR+ + + L ++ISG + +G+
Sbjct: 44 GAEVRPGRNADGIVVLTGGSSRVSDAIELL----SSGYGKRLLISG-VHRTNGV------ 92
Query: 135 NNKLLESGVERDD------IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ V I L+ +++T NA + +++I+V+S YH+ R+
Sbjct: 93 --HDISRTVPDSHRWLDCCIDLDRSAINTRSNAAEARRWAHERGFRSLIVVTSNYHMPRA 150
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ H + + + + P ++ L L EY L A
Sbjct: 151 IVEMSHAMPDVELIPFAVVGDKWRDEPWWSSGTTFRLLLSEYAKYLAA 198
>gi|323178792|gb|EFZ64368.1| sanA [Escherichia coli 1180]
Length = 191
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ GV I +
Sbjct: 37 RIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKGVPAKVIFCDYAGF 91
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + +I ++S +H +R+ + +GI+ + LN +
Sbjct: 92 STLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGF 146
>gi|86144371|ref|ZP_01062703.1| hypothetical protein MED222_08178 [Vibrio sp. MED222]
gi|85837270|gb|EAQ55382.1| hypothetical protein MED222_08178 [Vibrio sp. MED222]
Length = 292
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 49/132 (37%), Gaps = 22/132 (16%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKS--CKQHSMHCTIIISGGDPQKHG 127
++LG + + + SR+ + ++ + + GG Q
Sbjct: 8 IVLG--------KRLNENKLTNEGISRVDALVEYLAGPLAEESNQQTAVAFCGGVTQGQT 59
Query: 128 LAESIVYNNKLLESG------VERDDIKLETQSLDTFQNAQF-SSSMIKNMQGKN----- 175
++E+ + + E + LE S +T +N Q +S MI++
Sbjct: 60 VSEADMMHEYFRELENQLEYPFPIGAVLLEQHSTNTVENIQNLASEMIESGLFTRGQSVT 119
Query: 176 IILVSSAYHLKR 187
+ VS+ YHL+R
Sbjct: 120 VTFVSNDYHLQR 131
>gi|327468008|gb|EGF13498.1| hypothetical protein HMPREF9386_1972 [Streptococcus sanguinis
SK330]
Length = 211
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 18/156 (11%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGD-------PQKHGLAESIVYNNKLLESGVERDDIKLE 151
+ + Y+ II++GG P +G E+ V LL +G+ + IK E
Sbjct: 53 KAIEAYQKGYVR----RIIVTGGRSLTGTPHPDWNGYTEAEVIIQHLLAAGIPEEAIKSE 108
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL--KRSQLYFQHFGINTKASCSDYLNA 209
S +T +N F+ + + ++ + H +R + QH + + +
Sbjct: 109 NSSSNTLENVLFAKEIFDFNTVETVMFI-CKSHATGRRWRTLAQHLPKHLRYIPYTFNAF 167
Query: 210 YYSIIPLSANFYLTE----LALKEYIGILIAYYRGN 241
Y + ++ TE EY+ +L +G+
Sbjct: 168 YKDVEIGRDSWMNTEIGKSRVWGEYLRLLHYGEKGD 203
>gi|218700088|ref|YP_002407717.1| hypothetical protein ECIAI39_1719 [Escherichia coli IAI39]
gi|218370074|emb|CAR17850.1| conserved hypothetical protein [Escherichia coli IAI39]
Length = 234
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 68/176 (38%), Gaps = 22/176 (12%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
+ ++L G ++PTI A + P S T LY + QH + T
Sbjct: 1 MPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHPHYNT 58
Query: 116 IIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM--Q 172
I +G AE+ + + + + + I +E QS + +NA+FS +++ +
Sbjct: 59 IRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVER 111
Query: 173 GKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
I+V +R+ F+ G N + +Y +P N + + +
Sbjct: 112 VHTAIVVQDPTMQRRTMATFRRMTGDNPD---APRWLSYPGFVPQLGNNADSVIFV 164
>gi|331648889|ref|ZP_08349977.1| conserved hypothetical protein [Escherichia coli M605]
gi|330909152|gb|EGH37666.1| SanA protein [Escherichia coli AA86]
gi|331042636|gb|EGI14778.1| conserved hypothetical protein [Escherichia coli M605]
Length = 230
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 73/201 (36%), Gaps = 27/201 (13%)
Query: 11 SYWHLLCQS--IRKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGN 67
+ HLL + R+ + C +LL + I +++ Q ++ P
Sbjct: 4 VFAHLLRRVCFSRRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVG-- 61
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+LLG P R RI LY + K +++SG + +K+
Sbjct: 62 --LLLGA-------RPGNRY-----FTRRIDSAAELYHAGKVKW----LLVSGDNGRKN- 102
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ L+ GV I + T + ++ + +I ++S +H +R
Sbjct: 103 YDEASGMQQALIAKGVPAKAIFCDYAGFSTLDSVVRANKVFSEN---HITIISQEFHNQR 159
Query: 188 SQLYFQHFGINTKASCSDYLN 208
+ + +GI+ + LN
Sbjct: 160 AIWLAKQYGIDAIGFNAPDLN 180
>gi|284923114|emb|CBG36207.1| conserved hypothetical protein [Escherichia coli 042]
Length = 227
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ GV I +
Sbjct: 73 RIDTAAELYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKGVPAKVIFCDYAGF 127
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + +I ++S +H +R+ + +GI+ + LN +
Sbjct: 128 STLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGF 182
>gi|254708583|ref|ZP_05170411.1| hypothetical protein BpinM_16968 [Brucella pinnipedialis
M163/99/10]
Length = 132
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 11/125 (8%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFM---LLFSFIGWGIIPTILLKHLQFSYQRPLL 58
L+ IFL+V+ L + ++ + L F + +LL L+ + +
Sbjct: 15 PLTIIFLLVAIGLLAAWRGFRRLGIAVLIPATALLFFGAFTTGGAMLLSPLENRFPKSES 74
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
PQ + I++LG G + + + RI ETMRL + I++
Sbjct: 75 LPQ---HVDGIIVLG-GYMNGEIVAGRQNFELNSAADRIVETMRLARLY----PDAKILV 126
Query: 119 SGGDP 123
SGG+
Sbjct: 127 SGGEG 131
>gi|187736193|ref|YP_001878305.1| protein of unknown function DUF218 [Akkermansia muciniphila ATCC
BAA-835]
gi|187426245|gb|ACD05524.1| protein of unknown function DUF218 [Akkermansia muciniphila ATCC
BAA-835]
Length = 217
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 56/168 (33%), Gaps = 24/168 (14%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
+++LG P P+ ++R+ L+K K I+SG D H
Sbjct: 47 VLVLGC-------SPTFMGSPNGYFHNRMDTASELWKDGK----ATVFIVSG-DNSSHAY 94
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E L+E GV + I + L T + + +I+VS +H +R+
Sbjct: 95 NEPEWMKQALVERGVPEERIVCDFAGLRTLDSVVRMKEI---FGVSTMIVVSQEFHNERA 151
Query: 189 QLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
H G+ A + + S + +E +
Sbjct: 152 LAIAAHEGMAAWAVSAPDVPNRRSRMKSW---------FRERAARVWM 190
>gi|188582230|ref|YP_001925675.1| hypothetical protein Mpop_2985 [Methylobacterium populi BJ001]
gi|179345728|gb|ACB81140.1| protein of unknown function DUF218 [Methylobacterium populi BJ001]
Length = 234
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF-----GINTKASCS 204
L+ ++ +T NA + ++ I +V+S+YH+ R+ + +H + S
Sbjct: 110 LDYRARNTIGNAIETRRWMRRHGFTAIAVVTSSYHMPRTLVELRHALRDGETLIPYPVVS 169
Query: 205 DYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
D L+ A L EY+ L+A+ R
Sbjct: 170 DGLD-LGRWWADPAVMRLLGA---EYLKFLVAWGRTR 202
>gi|306816561|ref|ZP_07450693.1| putative thioredoxin-like protein [Escherichia coli NC101]
gi|305850126|gb|EFM50585.1| putative thioredoxin-like protein [Escherichia coli NC101]
Length = 230
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 69/188 (36%), Gaps = 23/188 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ + C +LL + I +++ Q + + + G +LLG
Sbjct: 16 RRTLKIGCLLLLIAGATIFIADRVMVNASQQLTWSDVNAVPARNVG---LLLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 -RPGNRY-----FTRRIDTAAELYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + ++ + +I ++S +H +R+ + +GI+
Sbjct: 116 KGVPAKAIFCDYAGFSTLDSVVRANKVFSEN---HITIISQEFHNQRAIWLAKQYGIDAI 172
Query: 201 ASCSDYLN 208
+ LN
Sbjct: 173 GFNAPDLN 180
>gi|291545639|emb|CBL18747.1| Uncharacterized conserved protein [Ruminococcus sp. SR1/5]
Length = 198
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 39/151 (25%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ ++I + GNG + + LY+ + I+ SG
Sbjct: 17 DKPEKADVIFVPGNGYPQMAE-----------------KAAELYR----NGFAPKILPSG 55
Query: 121 G----DPQKHGL------------AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
+ G+ E + L+++GV + I E Q+ T++NA +S
Sbjct: 56 RYSITAGRFTGVLDKKECYCGTYKTEWDFLKDVLMQNGVPEEAILKEDQATYTYENAIYS 115
Query: 165 SSMIKN--MQGKNIILVSSAYHLKRSQLYFQ 193
+ + K IL H +R+ +Y++
Sbjct: 116 RQVTDREYLDIKKAILCCKTCHARRALMYYK 146
>gi|260834719|ref|XP_002612357.1| hypothetical protein BRAFLDRAFT_79991 [Branchiostoma floridae]
gi|229297734|gb|EEN68366.1| hypothetical protein BRAFLDRAFT_79991 [Branchiostoma floridae]
Length = 229
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 47/127 (37%), Gaps = 20/127 (15%)
Query: 87 IEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL----------------AE 130
+ +F S+ R ++ SGG + E
Sbjct: 27 VILAFGSHDR--RVAEYAAELWHQRWAPWLVFSGGLGNLTEVTMILMHQRYILGVWDRPE 84
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRS 188
+ ++++ + +GV D I +E ++ ++ QN S +++ ++IILV Y +R+
Sbjct: 85 ADIFHDIAVAAGVPSDRILVENKASNSGQNVLLSYKLLQEHNIPTRSIILVQKPYMERRA 144
Query: 189 QLYFQHF 195
F
Sbjct: 145 YATFMKQ 151
>gi|254780579|ref|YP_003064992.1| hypothetical protein CLIBASIA_02330 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040256|gb|ACT57052.1| hypothetical protein CLIBASIA_02330 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 207
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 65/182 (35%), Gaps = 34/182 (18%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ F+ F+ L FI G I I Y + + P + IV+L
Sbjct: 2 RYFWYGLFVCLIFFI-MGFISFI-------RYVKQMHIPD-HPSVSAIVVLTG------- 45
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
RI L ++ I ISG H +++ I+ +
Sbjct: 46 -----------EPIRIERAFELLENQIGE----KIFISG---VHHSVSKDILLQKIPIRQ 87
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+ I + ++L+T NAQ +S+ + ++++V+ YH+ R+ L Q +
Sbjct: 88 DLAECCIDIGYKALNTEGNAQEASAWAEKNNFHHVLIVTHDYHMPRTFLELQRINSTVQF 147
Query: 202 SC 203
Sbjct: 148 IP 149
>gi|332086562|gb|EGI91707.1| hypothetical protein SB521682_3686 [Shigella boydii 5216-82]
Length = 171
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ GV I +
Sbjct: 17 RIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKGVPAKVIFCDYAGF 71
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + +I ++S +H +R+ + +GI+ + LN +
Sbjct: 72 STLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGF 126
>gi|187730086|ref|YP_001880222.1| hypothetical protein SbBS512_E1634 [Shigella boydii CDC 3083-94]
gi|187427078|gb|ACD06352.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
Length = 266
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 58/160 (36%), Gaps = 31/160 (19%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I ++ + + ++ISGG + G AE+ + +
Sbjct: 51 IDAACKIARDQQI-----PLLISGGIGHSTTFLYSVIAQHPHYNTIRTTGRAEATILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQH 194
+ + + I +E QS + +NA+FS ++ + I+V +R+ F+
Sbjct: 106 AHQFWHIPHEKIWIEDQSTNCGENARFSIALFNQAVERVHTAIVVQDPTMQRRTMATFRR 165
Query: 195 F-GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
G N + +Y +P N + + + + G+
Sbjct: 166 MTGDNPD---APRWLSYPGFVPQLGNNADSVIFINQLQGL 202
>gi|170078552|ref|YP_001735190.1| hypothetical protein SYNPCC7002_A1947 [Synechococcus sp. PCC 7002]
gi|169886221|gb|ACA99934.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
Length = 218
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 44/147 (29%), Gaps = 19/147 (12%)
Query: 71 LLG------NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+LG A+R + E R Q + +S G P
Sbjct: 28 VLGLIGLTCGAIAYQRIQGALRPAKAIFVLGGHEERERFAAQFAQEHPDLKVWVSSGSPP 87
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+E D ++L+ Q+ DT N K ++ L++S H
Sbjct: 88 -------EYARQIFANYQIEGDRLQLDYQAEDTVTNFTSLVDEFKQENIDSVYLITSENH 140
Query: 185 LKRSQLYF------QHFGINTKASCSD 205
+ R++L + I SD
Sbjct: 141 MNRAKLVASIVFGTRDIAIKPVPVPSD 167
>gi|126654814|ref|ZP_01726348.1| hypothetical protein CY0110_10272 [Cyanothece sp. CCY0110]
gi|126623549|gb|EAZ94253.1| hypothetical protein CY0110_10272 [Cyanothece sp. CCY0110]
Length = 198
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 46/181 (25%)
Query: 32 LFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
F + + L K LQ + +P I +LG
Sbjct: 24 FFPLLCLATLGLWLGYKQLQSYFAQP----------EAIFVLGGHEDRE----------- 62
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R + I +S G P+ + +G+ D + L
Sbjct: 63 -----------RFAAKLALEHPNLPIWVSSGSPENYVT-------KIFTNAGISGDRLHL 104
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY----FQHFGI--NTKASCS 204
+ Q+ DT N +K+ ++ L++S H+ R+++ F GI + S
Sbjct: 105 DYQAKDTVTNFTTLVKELKDQGIDSVYLITSDNHMNRARIIGEIVFGTQGITLKPLSVPS 164
Query: 205 D 205
D
Sbjct: 165 D 165
>gi|148241344|ref|YP_001226501.1| hypothetical protein SynRCC307_0245 [Synechococcus sp. RCC307]
gi|147849654|emb|CAK27148.1| Conserved hypothetical protein [Synechococcus sp. RCC307]
Length = 186
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 54/155 (34%), Gaps = 36/155 (23%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
P L W +I++LG R + L + +
Sbjct: 22 PRLLEPWMPPPQMILVLGG------------------DVEREKQAAALARQS-----NLP 58
Query: 116 IIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
++I+GG + Y + E GV+ ++L+ + DT N ++ +
Sbjct: 59 VLITGGSNPE--------YAQWVFEGQGVDAQKLQLDYAARDTLSNFTTLVDRLRRRGIR 110
Query: 175 NIILVSSAYHLKRSQL----YFQHFGINTKASCSD 205
+++LV+S+ H+ R+ L GI+
Sbjct: 111 HVLLVTSSDHMDRALLVGRVVAGSRGIHLTPVPVP 145
>gi|42523257|ref|NP_968637.1| hypothetical protein Bd1767 [Bdellovibrio bacteriovorus HD100]
gi|39575462|emb|CAE79630.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 184
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 60/165 (36%), Gaps = 29/165 (17%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRP----LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
SF + ++L +Q+ + S + V+L G
Sbjct: 5 SFWALAFLSAVVLYRFVDEFQKVQSERIQSWTKTPSADCAVVLTGG-------------- 50
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
R+ E L + + + + S + + + +D+
Sbjct: 51 ----AGRVREGFDLLVNQNVKKLVISGVYSNARLR-------EIMPVWPFYGNLSENDVV 99
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ +S T+ NAQ S +++ ++ ++I+LV+S H+ RS F+
Sbjct: 100 LDRRSETTYGNAQQSLPIVEALKCRDILLVTSRLHMYRSYRTFRA 144
>gi|157160892|ref|YP_001458210.1| hypothetical protein EcHS_A1497 [Escherichia coli HS]
gi|170020254|ref|YP_001725208.1| hypothetical protein EcolC_2244 [Escherichia coli ATCC 8739]
gi|194436529|ref|ZP_03068630.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|253773611|ref|YP_003036442.1| hypothetical protein ECBD_2226 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161471|ref|YP_003044579.1| hypothetical protein ECB_01369 [Escherichia coli B str. REL606]
gi|256018367|ref|ZP_05432232.1| hypothetical protein ShiD9_05602 [Shigella sp. D9]
gi|297518279|ref|ZP_06936665.1| hypothetical protein EcolOP_11613 [Escherichia coli OP50]
gi|300927675|ref|ZP_07143244.1| putative protein YdcF [Escherichia coli MS 187-1]
gi|307309801|ref|ZP_07589451.1| protein of unknown function DUF218 [Escherichia coli W]
gi|312971580|ref|ZP_07785755.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|332279419|ref|ZP_08391832.1| conserved hypothetical protein [Shigella sp. D9]
gi|157066572|gb|ABV05827.1| conserved hypothetical protein [Escherichia coli HS]
gi|169755182|gb|ACA77881.1| protein of unknown function DUF218 [Escherichia coli ATCC 8739]
gi|194424561|gb|EDX40547.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|242377166|emb|CAQ31898.1| conserved protein [Escherichia coli BL21(DE3)]
gi|253324655|gb|ACT29257.1| protein of unknown function DUF218 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973372|gb|ACT39043.1| hypothetical protein ECB_01369 [Escherichia coli B str. REL606]
gi|253977583|gb|ACT43253.1| hypothetical protein ECD_01369 [Escherichia coli BL21(DE3)]
gi|300464285|gb|EFK27778.1| putative protein YdcF [Escherichia coli MS 187-1]
gi|306909519|gb|EFN40013.1| protein of unknown function DUF218 [Escherichia coli W]
gi|310336177|gb|EFQ01377.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|315060694|gb|ADT75021.1| conserved protein [Escherichia coli W]
gi|323378740|gb|ADX51008.1| protein of unknown function DUF218 [Escherichia coli KO11]
gi|323962392|gb|EGB57977.1| hypothetical protein ERGG_01163 [Escherichia coli H489]
gi|323973613|gb|EGB68794.1| hypothetical protein ERHG_00419 [Escherichia coli TA007]
gi|324117607|gb|EGC11512.1| hypothetical protein ERBG_02437 [Escherichia coli E1167]
gi|332101771|gb|EGJ05117.1| conserved hypothetical protein [Shigella sp. D9]
gi|332343077|gb|AEE56411.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 266
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 22/180 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N + +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRMTGDNPD---APRWLSYPGFVPQLGNNADSVIFV 196
>gi|330828173|ref|YP_004391125.1| SanA protein [Aeromonas veronii B565]
gi|328803309|gb|AEB48508.1| SanA protein [Aeromonas veronii B565]
Length = 315
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 14/144 (9%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + P+ RI LY + K II+SG +
Sbjct: 51 VVLG------TSKYLSGGGPNHYFKYRIKAAAELYNNAKVDF----IIVSGDNATVQ-YN 99
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E L+++G+ I ++ T + + + + +VS +H +R+
Sbjct: 100 EPRQMRRALIKAGIPASAIYMDFAGFRTLDSVVRAKEV---FGQERFTVVSQGFHNERAI 156
Query: 190 LYFQHFGINTKASCSDYLNAYYSI 213
+HFGI+ ++ +AY I
Sbjct: 157 FIARHFGIDAVGFNAEDPSAYQGI 180
>gi|323172795|gb|EFZ58427.1| hypothetical protein ECLT68_2624 [Escherichia coli LT-68]
Length = 266
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 22/180 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N + +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRMTGDNPD---APRWLSYPGFVPQLGNNADSVIFV 196
>gi|315298517|gb|EFU57772.1| putative protein YdcF [Escherichia coli MS 16-3]
Length = 266
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 22/180 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N + +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRITGDNPD---APRWLSYPGFVPQLGNNADSVIFV 196
>gi|26247702|ref|NP_753742.1| hypothetical protein c1841 [Escherichia coli CFT073]
gi|227886196|ref|ZP_04004001.1| protein YdcF [Escherichia coli 83972]
gi|300976332|ref|ZP_07173394.1| putative protein YdcF [Escherichia coli MS 45-1]
gi|301046777|ref|ZP_07193898.1| putative protein YdcF [Escherichia coli MS 185-1]
gi|26108104|gb|AAN80304.1|AE016760_163 Protein ydcF [Escherichia coli CFT073]
gi|227836861|gb|EEJ47327.1| protein YdcF [Escherichia coli 83972]
gi|300301286|gb|EFJ57671.1| putative protein YdcF [Escherichia coli MS 185-1]
gi|300410118|gb|EFJ93656.1| putative protein YdcF [Escherichia coli MS 45-1]
gi|307553427|gb|ADN46202.1| conserved hypothetical protein YdcF [Escherichia coli ABU 83972]
gi|315290678|gb|EFU50050.1| putative protein YdcF [Escherichia coli MS 153-1]
Length = 266
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 22/180 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N + +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRITGDNPD---APRWLSYPGFVPQLGNNADSVIFV 196
>gi|118386519|ref|XP_001026378.1| hypothetical protein TTHERM_00670570 [Tetrahymena thermophila]
gi|89308145|gb|EAS06133.1| hypothetical protein TTHERM_00670570 [Tetrahymena thermophila
SB210]
Length = 232
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 66/181 (36%), Gaps = 26/181 (14%)
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL--YKSCKQHSMHCTIIISGGDPQKHGLA 129
LG Q + E ++ ++ + H I++SG +
Sbjct: 18 LGYALHKDALGNIEMQGELKQRLDYLVENIKQSQFEQNVKTENHSIIVVSG---RGKVDI 74
Query: 130 ESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFS------------SSMIKNMQGK-N 175
ES N L+E +++D I +E S++T +N FS SS++ +
Sbjct: 75 ESQYMENYLIEKHKIQKDRILVEKYSMNTVENFLFSFYELWNRFEKSVSSLLAKNKINIE 134
Query: 176 IILVSSAYHLKRSQLYFQHFGINT-KASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+I+++S +H+KR Q + + + + + ++ T E IL
Sbjct: 135 LIVITSDFHVKRVQYIAE-ASLKVLLPAFKNCYVLPLKFLGSPSHSGKT-----EEAAIL 188
Query: 235 I 235
Sbjct: 189 W 189
>gi|296271234|ref|YP_003653866.1| hypothetical protein Tbis_3283 [Thermobispora bispora DSM 43833]
gi|296094021|gb|ADG89973.1| protein of unknown function DUF218 [Thermobispora bispora DSM
43833]
Length = 196
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 71/187 (37%), Gaps = 22/187 (11%)
Query: 44 ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRL 103
I+ L L+ +V+LG A+ R+ +R
Sbjct: 17 IVWAELVHWRSSRRLTNPDHGGTEAVVVLGYRNPRADRANALNRW-------RVRAGLR- 68
Query: 104 YKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
S + +I+SGG E++V E ++ ET+S T++N +
Sbjct: 69 --SIDPGAPSTRLILSGG------PYEALVMARYATEVRGYAGEVVCETESRGTWENVRN 120
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYF--QHFGINTKASC-SDYLNAYYSII-PLSAN 219
+++ + I +VS+ H ++++ Y Q + + +DY ++ + P A
Sbjct: 121 VIPYLEDR--ERIKIVSNPLHAEKARRYLWRQRPDLAARLVPAADYRPGEWAPLKPFFAA 178
Query: 220 FYLTELA 226
+ L +LA
Sbjct: 179 YGLLDLA 185
>gi|209918688|ref|YP_002292772.1| hypothetical protein ECSE_1497 [Escherichia coli SE11]
gi|209911947|dbj|BAG77021.1| conserved hypothetical protein [Escherichia coli SE11]
gi|324021262|gb|EGB90481.1| putative protein YdcF [Escherichia coli MS 117-3]
Length = 266
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 22/180 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N + +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRMTGDNPD---APRWLSYPGFVPQLGNNADSVIFV 196
>gi|91210659|ref|YP_540645.1| hypothetical protein UTI89_C1636 [Escherichia coli UTI89]
gi|110641599|ref|YP_669329.1| hypothetical protein ECP_1419 [Escherichia coli 536]
gi|117623666|ref|YP_852579.1| hypothetical protein APECO1_565 [Escherichia coli APEC O1]
gi|191170884|ref|ZP_03032435.1| conserved hypothetical protein [Escherichia coli F11]
gi|215486652|ref|YP_002329083.1| hypothetical protein E2348C_1552 [Escherichia coli O127:H6 str.
E2348/69]
gi|218558350|ref|YP_002391263.1| hypothetical protein ECS88_1510 [Escherichia coli S88]
gi|218689348|ref|YP_002397560.1| hypothetical protein ECED1_1572 [Escherichia coli ED1a]
gi|237705395|ref|ZP_04535876.1| YdcF [Escherichia sp. 3_2_53FAA]
gi|300972512|ref|ZP_07171989.1| putative protein YdcF [Escherichia coli MS 200-1]
gi|306813611|ref|ZP_07447794.1| hypothetical protein ECNC101_16912 [Escherichia coli NC101]
gi|312969282|ref|ZP_07783486.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|331672956|ref|ZP_08373734.1| protein YdcF [Escherichia coli TA280]
gi|91072233|gb|ABE07114.1| hypothetical protein YdcF [Escherichia coli UTI89]
gi|110343191|gb|ABG69428.1| protein YdcF [Escherichia coli 536]
gi|115512790|gb|ABJ00865.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|190908616|gb|EDV68204.1| conserved hypothetical protein [Escherichia coli F11]
gi|215264724|emb|CAS09100.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
gi|218365119|emb|CAR02828.1| conserved hypothetical protein [Escherichia coli S88]
gi|218426912|emb|CAR07770.2| conserved hypothetical protein [Escherichia coli ED1a]
gi|226900152|gb|EEH86411.1| YdcF [Escherichia sp. 3_2_53FAA]
gi|294489774|gb|ADE88530.1| conserved hypothetical protein [Escherichia coli IHE3034]
gi|300309137|gb|EFJ63657.1| putative protein YdcF [Escherichia coli MS 200-1]
gi|305853058|gb|EFM53502.1| hypothetical protein ECNC101_16912 [Escherichia coli NC101]
gi|307627062|gb|ADN71366.1| hypothetical protein UM146_09935 [Escherichia coli UM146]
gi|312286066|gb|EFR13982.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|315289741|gb|EFU49131.1| putative protein YdcF [Escherichia coli MS 110-3]
gi|323187596|gb|EFZ72905.1| hypothetical protein ECRN5871_4421 [Escherichia coli RN587/1]
gi|323952698|gb|EGB48567.1| hypothetical protein ERKG_00955 [Escherichia coli H252]
gi|323956828|gb|EGB52561.1| hypothetical protein ERLG_01920 [Escherichia coli H263]
gi|324009943|gb|EGB79162.1| putative protein YdcF [Escherichia coli MS 57-2]
gi|324015191|gb|EGB84410.1| putative protein YdcF [Escherichia coli MS 60-1]
gi|331069864|gb|EGI41241.1| protein YdcF [Escherichia coli TA280]
Length = 266
Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 22/180 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F+ G N + +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRRITGDNPD---APRWLSYPGFVPQLGNNADSVIFV 196
>gi|301025123|ref|ZP_07188716.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|299880175|gb|EFI88386.1| conserved hypothetical protein [Escherichia coli MS 196-1]
Length = 230
Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 69/194 (35%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ ++C +LL + I +++ Q ++ P +LLG
Sbjct: 16 RRTLKIACLLLLVAGATILIADRVMVNASKQLTWSDVNAVPARNVG----LLLGA----- 66
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 --RPGNRY-----FTRRIDTVAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 114
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 115 AKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDA 171
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 172 IGFNAPDLNMKHGF 185
>gi|186685641|ref|YP_001868837.1| hypothetical protein Npun_R5589 [Nostoc punctiforme PCC 73102]
gi|186468093|gb|ACC83894.1| protein of unknown function DUF218 [Nostoc punctiforme PCC 73102]
Length = 176
Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 64/181 (35%), Gaps = 43/181 (23%)
Query: 40 IIPTILLK---HLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
++P I+ +Q + +P +V+LG T R
Sbjct: 4 VLPLIIWWGYKEVQNQFVQP----------QAVVVLGGST-------------------R 34
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
E + + + I I+GG P + ++GV+ + L+ +++D
Sbjct: 35 RLEREKFTAEFVRQHPNIPIWITGGSPPRFT-------QRVFTKAGVDPKRLHLDYEAVD 87
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS----QLYFQHFGINTKASCSDYLNAYYS 212
T N ++ K++ L++S +H++R+ ++ GI K S
Sbjct: 88 TVTNFTTLVDDLQARGIKSVYLITSDFHMRRACVIGEIILGSRGIYLKPVPVPSEKPPES 147
Query: 213 I 213
I
Sbjct: 148 I 148
>gi|331646695|ref|ZP_08347798.1| protein YdcF [Escherichia coli M605]
gi|281178552|dbj|BAI54882.1| conserved hypothetical protein [Escherichia coli SE15]
gi|330911228|gb|EGH39738.1| protein ydcF [Escherichia coli AA86]
gi|331045447|gb|EGI17574.1| protein YdcF [Escherichia coli M605]
Length = 266
Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 18/146 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQH 194
+ I+V +R+ F+
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFRR 165
>gi|225785360|emb|CAX32378.1| Conserved hypothetical protein [Prochlorococcus marinus str. MIT
9313]
Length = 213
Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 66/175 (37%), Gaps = 44/175 (25%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+S + + LLF I G + Y++ L + K +I++LG
Sbjct: 2 RSWCRPGPIVVVGLLFWLIAAGPL---------RPYRQALTN---GKPPQLILVLGG--- 46
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
R +RL + ++ +++SGG ++ Y
Sbjct: 47 ---------------DVDREHLGIRLARD-----LNLPLVVSGGS--------NLEYAQW 78
Query: 138 LL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L+ E G+ ++L+ ++ DT N ++ ++++LV+S HL RS
Sbjct: 79 LVSEVGIPLSQVQLDYRAKDTLGNFTSLVDELRLKGIQHVLLVTSEDHLPRSMAV 133
>gi|332753148|gb|EGJ83532.1| hypothetical protein SF434370_3328 [Shigella flexneri 4343-70]
Length = 203
Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ GV I +
Sbjct: 49 RIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKGVPAKVIFCDYAGF 103
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + +I ++S +H +R+ + +GI+ + LN +
Sbjct: 104 STLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGF 158
>gi|315617162|gb|EFU97771.1| conserved hypothetical protein [Escherichia coli 3431]
Length = 203
Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ GV I +
Sbjct: 49 RIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKGVPAKVIFCDYAGF 103
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + +I ++S +H +R+ + +GI+ + LN +
Sbjct: 104 STLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGF 158
>gi|15891332|ref|NP_357004.1| hypothetical protein Atu3608 [Agrobacterium tumefaciens str. C58]
gi|15159715|gb|AAK89789.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 243
Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 81/214 (37%), Gaps = 46/214 (21%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+ C + L +F G L F+ + P G+ I++L G
Sbjct: 34 LILVCVIALGAFSG---------GFLWFADSVASMRPPEGARGDAIIVLTGG-------- 76
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN---KLLE 140
Y RI + + L + + ++ISG +P ++ +
Sbjct: 77 ----------YQRIEQAVGLLRD----GVGKRLLISGVNPA-TTRSQIRKMTQGSSDMFT 121
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
V+ + +++DT NA ++S I++ +I++V++ YH+ RS ++ T+
Sbjct: 122 CCVD-----MGYKAIDTIGNANEAASWIRDHNYSSIVVVTNNYHMHRSLHELRNASPQTE 176
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELA---LKEYI 231
++A + + F ++ L EY+
Sbjct: 177 FIAYPVISA---DLVRTNWFVEPDVVRTLLYEYL 207
>gi|225025892|ref|ZP_03715084.1| hypothetical protein EUBHAL_00120 [Eubacterium hallii DSM 3353]
gi|224956789|gb|EEG37998.1| hypothetical protein EUBHAL_00120 [Eubacterium hallii DSM 3353]
Length = 213
Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 22/122 (18%)
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG----DPQKHGLA------------ESI 132
P E RLYK ++ SGG G++ E+
Sbjct: 41 PGCARPEHTEEAARLYKD----GYAPLLLPSGGYTKVQGSFQGVSKEGQKYGADFACEAD 96
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--KNMQGKNIILVSSAYHLKRSQL 190
L+++GV I E ++ T +NA+ + ++ K++ K IL A+H +RS L
Sbjct: 97 FLEAVLIQNGVPASAILKECEATYTLENAEKTKVLLEKKDIHLKKAILCCKAHHSRRSYL 156
Query: 191 YF 192
Y+
Sbjct: 157 YY 158
>gi|205352676|ref|YP_002226477.1| hypothetical protein SG1479 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205272457|emb|CAR37346.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326627743|gb|EGE34086.1| hypothetical protein SG9_1506 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 266
Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 27/120 (22%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + + I LE S + +NA+FS ++I+ + I+V +R+ F+
Sbjct: 106 ANQFWHIPAEKIWLEDLSTNCGENARFSCALIRQAKENINTAIVVQDPTMQRRTIAAFRR 165
>gi|312972649|ref|ZP_07786822.1| sanA [Escherichia coli 1827-70]
gi|310332591|gb|EFP99804.1| sanA [Escherichia coli 1827-70]
Length = 207
Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 45/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ V I +
Sbjct: 53 RIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKDVPAKVIFCDYAGF 107
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + +I ++S +H +R+ + +GI+ + LN +
Sbjct: 108 STLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGF 162
>gi|227504565|ref|ZP_03934614.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
gi|227198885|gb|EEI78933.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
Length = 212
Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 24/191 (12%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY 104
LL+ +P LS + + I++LG PS +R+ E + +
Sbjct: 3 LLRRAAQRGAKPALS--LEANIEAIIVLGAAQYD--------GRPSRILSARLEEAVDAH 52
Query: 105 KSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
I+ GG E+ V + L E V + DT ++ +
Sbjct: 53 AVY----PQIPIVTVGGKLPGDRFTEAEVGQSYLSER-VPDACVLAVPVGNDTVESLREV 107
Query: 165 SSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
+ N I+++ H R L + G++T+ A P A +
Sbjct: 108 R---QRYGYANAIVITDPLHRLRVWLIARDEGMSTQV-----RGASRYPTPTFARAWWRY 159
Query: 225 LALKEYIGILI 235
LA E G+ +
Sbjct: 160 LA-HEMGGLAV 169
>gi|218676193|ref|YP_002395012.1| hypothetical protein VS_II0415 [Vibrio splendidus LGP32]
gi|218324461|emb|CAV25898.1| hypothetical protein VS_II0415 [Vibrio splendidus LGP32]
Length = 292
Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 49/132 (37%), Gaps = 22/132 (16%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKS--CKQHSMHCTIIISGGDPQKHG 127
++LG + + + SR+ + ++ + + GG Q
Sbjct: 8 IVLG--------KRLNENKLTNEGTSRVDALVEYLSGPLAEESNQQTAVAFCGGVTQGQT 59
Query: 128 LAESIVYNNKLLESG------VERDDIKLETQSLDTFQNAQF-SSSMIKNMQGKN----- 175
++E+ + + E + LE S +T +N Q +S MI++
Sbjct: 60 VSEADMMHEYFRELENQREYPFPIGAVLLEQHSTNTVENIQNLASEMIESGLFTRGQSVT 119
Query: 176 IILVSSAYHLKR 187
+ VS+ YHL+R
Sbjct: 120 VTFVSNDYHLQR 131
>gi|260773007|ref|ZP_05881923.1| SanA protein [Vibrio metschnikovii CIP 69.14]
gi|260612146|gb|EEX37349.1| SanA protein [Vibrio metschnikovii CIP 69.14]
Length = 252
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 67/201 (33%), Gaps = 19/201 (9%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
L +R ++L I +I +I + + ++ V+
Sbjct: 10 MISRLKTLLRWFLRGVALLMLLFLIAVAVIFSIDRWVSWQTQPHIISDINKLPKFDVAVV 69
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG + T+ + RI + LY+ K ++SG + E
Sbjct: 70 LGTSKYLGRTLNDYYLH-------RIEAAVELYQLNKTDY----FLLSGDNA-HRSYNEP 117
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
LL++GV + I L+ T + + + N ++V+ +H +R+
Sbjct: 118 WTMKRDLLKAGVPDEQIYLDYAGFRTLDSIVRAKRIFD---TDNFLIVTQRFHCERALFI 174
Query: 192 FQHFGIN----TKASCSDYLN 208
QH IN ++L
Sbjct: 175 AQHHEINATCLAVPGPKNHLG 195
>gi|75908946|ref|YP_323242.1| hypothetical protein Ava_2734 [Anabaena variabilis ATCC 29413]
gi|75702671|gb|ABA22347.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 167
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 54/139 (38%), Gaps = 27/139 (19%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ + + +IVL G+ +R E + S +
Sbjct: 3 FGYQEAKNAYTQPQAVIVLGGS--------------------TRNLEREKFTASFARQHP 42
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+ I ISGG P + ++G++ + L+ +++DT N +++
Sbjct: 43 NLPIWISGGSPPVYT-------KRVFKKAGIDTKRLHLDYEAVDTVTNFTTLIDELQSRG 95
Query: 173 GKNIILVSSAYHLKRSQLY 191
K++ L++S +H++R+ +
Sbjct: 96 IKSVYLITSDFHMRRACII 114
>gi|323979003|gb|EGB74082.1| hypothetical protein ERFG_00182 [Escherichia coli TW10509]
Length = 230
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ GV I +
Sbjct: 76 RIDTAAELYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKGVPAKVIFCDYAGF 130
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + +I ++S +H +R+ + +GI+ + LN +
Sbjct: 131 STLDSVVRAKKVFGE---SHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGF 185
>gi|300916252|ref|ZP_07133001.1| putative protein YdcF [Escherichia coli MS 115-1]
gi|300416434|gb|EFJ99744.1| putative protein YdcF [Escherichia coli MS 115-1]
Length = 266
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 55/154 (35%), Gaps = 31/154 (20%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKH-------------------GLAESIVYNNK 137
I ++ + + ++ISGG G AE+ + +
Sbjct: 51 IDAACKIARDQQI-----PLLISGGIGHSTTFLYSAIAQHPHYNTIRTAGRAEATILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQH 194
+ + + I +E QS + +NA+FS +++ + I+V +R+ F+
Sbjct: 106 AHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQDPTMQRRTMATFRR 165
Query: 195 F-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
G N + +Y +P N + + +
Sbjct: 166 MTGDNPD---APRWLSYPGFVPQLGNNADSVIFV 196
>gi|323966614|gb|EGB62047.1| hypothetical protein ERJG_02203 [Escherichia coli M863]
gi|327251872|gb|EGE63558.1| hypothetical protein ECSTEC7V_3725 [Escherichia coli STEC_7v]
Length = 230
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ GV I +
Sbjct: 76 RIDTAAELYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKGVPAKVIFCDYAGF 130
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + +I ++S +H +R+ + +GI+ + LN +
Sbjct: 131 STLDSVVRAKKVFGE---SHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGF 185
>gi|331083076|ref|ZP_08332193.1| hypothetical protein HMPREF0992_01117 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330405078|gb|EGG84615.1| hypothetical protein HMPREF0992_01117 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 200
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 52/148 (35%), Gaps = 26/148 (17%)
Query: 99 ETMRLYKSCKQHSMHCTIIISG------GD----------PQKHGLAESIVYNNKLLESG 142
E +LY + I+ SG G E L ++
Sbjct: 38 EAAKLYHQ----GLAPYILPSGKYSILNGKFAGVQEKQELYDGEYETEWEFLKEVLKKNQ 93
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIK--NMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
V + I E ++ T++NA +S + M+ K IL YH +RS LY+Q
Sbjct: 94 VSEEHILREDKATYTYENAIYSRKVTDCLGMEIKKAILCCKPYHARRSLLYYQLL----Y 149
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALK 228
++ N+YLTE ++
Sbjct: 150 PETQFFVRPIQDSDVKRENWYLTEKGIR 177
>gi|156933876|ref|YP_001437792.1| hypothetical protein ESA_01702 [Cronobacter sakazakii ATCC BAA-894]
gi|156532130|gb|ABU76956.1| hypothetical protein ESA_01702 [Cronobacter sakazakii ATCC BAA-894]
Length = 276
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 40/128 (31%), Gaps = 27/128 (21%)
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAE 130
+ RL K ++I+GG + GL E
Sbjct: 54 GNAVLPTVDAAARLAK-----ESGLPLLITGGLGHSTTFLYAAVAQHPRYNHLRTTGLTE 108
Query: 131 SIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKR 187
+ + E V + I +E +S + +NA+F+ ++ +L+ +R
Sbjct: 109 AGILARIAREFHEVPEEQIIVEEKSTNCGENARFTRELLDARGELPARAVLIQDPTMQRR 168
Query: 188 SQLYFQHF 195
+ F
Sbjct: 169 THATFTRA 176
>gi|168797681|ref|ZP_02822688.1| putative SanA protein [Escherichia coli O157:H7 str. EC508]
gi|189379690|gb|EDU98106.1| putative SanA protein [Escherichia coli O157:H7 str. EC508]
gi|209759082|gb|ACI77853.1| hypothetical protein ECs3968 [Escherichia coli]
gi|326337790|gb|EGD61624.1| SanA protein [Escherichia coli O157:H7 str. 1125]
Length = 230
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/209 (16%), Positives = 73/209 (34%), Gaps = 26/209 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ ++C +LL + I +++ Q ++ + P +LLG
Sbjct: 16 RRTLKIACLLLLVAGATIFIADRVMVNASKQLTWSDVNVVPARNVG----LLLGA----- 66
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 --RPGNRY-----FTRRIDTAAELYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 114
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + ++ + +I ++S +H +R+ + +GI+
Sbjct: 115 AKGVPAKVIFCDYAGFSTLDSVVRANKVFGEN---HITIISQEFHNQRAIWLAKQYGIDA 171
Query: 200 KASCS-DYLNAYYSIIPLSANFYLTELAL 227
+ D I+ L +
Sbjct: 172 IGFNAPDLEKGRGKIVRLREKLARVSAVI 200
>gi|213512395|ref|NP_001134830.1| SCO4629 [Salmo salar]
gi|209736410|gb|ACI69074.1| SCO4629 [Salmo salar]
Length = 216
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 6/104 (5%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHG----LAESIVYNNKLLESGVERDDIKLETQ 153
+ ++ +G + E+ V+ + L GV R +I LET+
Sbjct: 36 VRVAERSAALFLEGWAPWLLFTGYQGNQTAGVWSRPEADVFLDVALRMGVPRGNILLETE 95
Query: 154 SLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHF 195
+ +T N FS ++K +ILV + +R F
Sbjct: 96 ATNTGDNICFSYRLLKQRNIPANRVILVQQPFMERRVSATFLRQ 139
>gi|15803627|ref|NP_289660.1| hypothetical protein Z4439 [Escherichia coli O157:H7 EDL933]
gi|15833222|ref|NP_311995.1| hypothetical protein ECs3968 [Escherichia coli O157:H7 str. Sakai]
gi|168749322|ref|ZP_02774344.1| putative SanA protein [Escherichia coli O157:H7 str. EC4113]
gi|168754061|ref|ZP_02779068.1| putative SanA protein [Escherichia coli O157:H7 str. EC4401]
gi|168762043|ref|ZP_02787050.1| putative SanA protein [Escherichia coli O157:H7 str. EC4501]
gi|168769498|ref|ZP_02794505.1| putative SanA protein [Escherichia coli O157:H7 str. EC4486]
gi|168773253|ref|ZP_02798260.1| putative SanA protein [Escherichia coli O157:H7 str. EC4196]
gi|168781224|ref|ZP_02806231.1| putative SanA protein [Escherichia coli O157:H7 str. EC4076]
gi|168785964|ref|ZP_02810971.1| putative SanA protein [Escherichia coli O157:H7 str. EC869]
gi|195937232|ref|ZP_03082614.1| hypothetical protein EscherichcoliO157_12386 [Escherichia coli
O157:H7 str. EC4024]
gi|208808971|ref|ZP_03251308.1| putative SanA protein [Escherichia coli O157:H7 str. EC4206]
gi|208812247|ref|ZP_03253576.1| putative SanA protein [Escherichia coli O157:H7 str. EC4045]
gi|208821014|ref|ZP_03261334.1| putative SanA protein [Escherichia coli O157:H7 str. EC4042]
gi|209400696|ref|YP_002272559.1| putative SanA protein [Escherichia coli O157:H7 str. EC4115]
gi|217327782|ref|ZP_03443865.1| putative SanA protein [Escherichia coli O157:H7 str. TW14588]
gi|254795037|ref|YP_003079874.1| putative thioredoxin-like protein [Escherichia coli O157:H7 str.
TW14359]
gi|261228098|ref|ZP_05942379.1| predicted thioredoxin-like protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261254954|ref|ZP_05947487.1| predicted thioredoxin-like protein [Escherichia coli O157:H7 str.
FRIK966]
gi|12517673|gb|AAG58219.1|AE005538_6 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13363441|dbj|BAB37391.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|187770753|gb|EDU34597.1| putative SanA protein [Escherichia coli O157:H7 str. EC4196]
gi|188016392|gb|EDU54514.1| putative SanA protein [Escherichia coli O157:H7 str. EC4113]
gi|189000998|gb|EDU69984.1| putative SanA protein [Escherichia coli O157:H7 str. EC4076]
gi|189358584|gb|EDU77003.1| putative SanA protein [Escherichia coli O157:H7 str. EC4401]
gi|189361482|gb|EDU79901.1| putative SanA protein [Escherichia coli O157:H7 str. EC4486]
gi|189367600|gb|EDU86016.1| putative SanA protein [Escherichia coli O157:H7 str. EC4501]
gi|189373918|gb|EDU92334.1| putative SanA protein [Escherichia coli O157:H7 str. EC869]
gi|208728772|gb|EDZ78373.1| putative SanA protein [Escherichia coli O157:H7 str. EC4206]
gi|208733524|gb|EDZ82211.1| putative SanA protein [Escherichia coli O157:H7 str. EC4045]
gi|208741137|gb|EDZ88819.1| putative SanA protein [Escherichia coli O157:H7 str. EC4042]
gi|209162096|gb|ACI39529.1| putative SanA protein [Escherichia coli O157:H7 str. EC4115]
gi|209759080|gb|ACI77852.1| hypothetical protein ECs3968 [Escherichia coli]
gi|209759086|gb|ACI77855.1| hypothetical protein ECs3968 [Escherichia coli]
gi|217320149|gb|EEC28574.1| putative SanA protein [Escherichia coli O157:H7 str. TW14588]
gi|254594437|gb|ACT73798.1| predicted thioredoxin-like protein [Escherichia coli O157:H7 str.
TW14359]
gi|320189438|gb|EFW64097.1| SanA protein [Escherichia coli O157:H7 str. EC1212]
gi|320640159|gb|EFX09731.1| putative thioredoxin-like protein [Escherichia coli O157:H7 str.
G5101]
gi|326347355|gb|EGD71080.1| SanA protein [Escherichia coli O157:H7 str. 1044]
Length = 230
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/209 (16%), Positives = 73/209 (34%), Gaps = 26/209 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ ++C +LL + I +++ Q ++ + P +LLG
Sbjct: 16 RRTLKIACLLLLVAGATIFIADRVMVNASKQLTWSDVNVVPARNVG----LLLGA----- 66
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 --RPGNRY-----FTRRIDTAAELYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 114
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + ++ + +I ++S +H +R+ + +GI+
Sbjct: 115 AKGVPAKVIFCDYAGFSTLDSVVRANKVFGEN---HITIISQEFHNQRAIWLAKQYGIDA 171
Query: 200 KASCS-DYLNAYYSIIPLSANFYLTELAL 227
+ D I+ L +
Sbjct: 172 IGFNAPDLEKGRGKIVRLREKLARVSAVI 200
>gi|111224133|ref|YP_714927.1| hypothetical protein FRAAL4743 [Frankia alni ACN14a]
gi|111151665|emb|CAJ63384.1| hypothetical protein; putative signal peptide [Frankia alni ACN14a]
Length = 226
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 49/125 (39%), Gaps = 15/125 (12%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
++ +V+LG P+ A + P + R +R +I +G
Sbjct: 57 PARRGAQAVVVLG-----FPSTRAGTLHPLQRW--RTEIGVR----SLAPDAGSRLIFTG 105
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
G P + E+ + GV + I+LET + +T++N F+ +++ + +
Sbjct: 106 GGPPG-AVTEAEAMAGYARDALGVPAEKIRLETSARNTWENITFALPFVESA--DTVAIA 162
Query: 180 SSAYH 184
S H
Sbjct: 163 SDPLH 167
>gi|302346708|ref|YP_003815006.1| putative protein SanA [Prevotella melaninogenica ATCC 25845]
gi|302150354|gb|ADK96615.1| putative protein SanA [Prevotella melaninogenica ATCC 25845]
Length = 223
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 60/164 (36%), Gaps = 24/164 (14%)
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
LLG PS +RI T LYK K +IISG ++ G E
Sbjct: 68 LLG-----TNPKARDGKRPSSFYMARIKATTELYKHGKFKQ----LIISGD--KREGYDE 116
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ L+E GV I ++ Q T + + +N + N+I++S +H +RS
Sbjct: 117 PQTMRHDLIERGVPDSIITMDGQGYRTLLSMRNIK---QNFRVNNMIIISQKWHNERSIF 173
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I +D + +I ++E + +
Sbjct: 174 LADKMNIKAVGYNADDVRHPRAIWTH----------IRELLARV 207
>gi|189467152|ref|ZP_03015937.1| hypothetical protein BACINT_03536 [Bacteroides intestinalis DSM
17393]
gi|189435416|gb|EDV04401.1| hypothetical protein BACINT_03536 [Bacteroides intestinalis DSM
17393]
Length = 220
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 79/199 (39%), Gaps = 21/199 (10%)
Query: 17 CQSIRKIFF--MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ R+I + ++ +L+F+ I ++H ++ + + +LLG
Sbjct: 8 SKWARRIKWSILTGTILIFAVIVC---ANYAVRHTAKAFIYQNIDSIPQNKAG--LLLGT 62
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
+ +P + +RI T+ LYK+ K ++ISG D + G E
Sbjct: 63 SKLLRSGLPNQYFQ------NRIQATVDLYKAGKIE----VVVISG-DNSRKGYNEPEDM 111
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
++L+ G+ D I L+ T + M K K+ ++S +H +R+
Sbjct: 112 KSELMLRGIPEDKIYLDYAGFRTLDS---VVRMEKIFGQKSFTIISQKFHNQRAIYIAHA 168
Query: 195 FGINTKASCSDYLNAYYSI 213
G+ ++ +NAY
Sbjct: 169 KGLQVVGYNAEDVNAYSGF 187
>gi|166368729|ref|YP_001661002.1| hypothetical protein MAE_59880 [Microcystis aeruginosa NIES-843]
gi|166091102|dbj|BAG05810.1| hypothetical protein MAE_59880 [Microcystis aeruginosa NIES-843]
Length = 227
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 58/175 (33%), Gaps = 43/175 (24%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+L+F FI + + + ++ L +K + I++LG
Sbjct: 24 ILVFGFIIFNLAINLAIR----------LPINQQKPVDAILVLGG--------------- 58
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S R L + I+IS G + + ++
Sbjct: 59 ---SIRREIYVANLAQQY----PDIPILISQGSKDP-------CILLLFERAKAPKTNVW 104
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF----QHFGINTK 200
LE + TF N F+ ++K + +V+S HL R++ Q GI +
Sbjct: 105 LEKCADSTFGNFFFAVPILKQWGVHKVKVVTSPTHLPRAKWLAAIHLQSHGIAVE 159
>gi|291284464|ref|YP_003501282.1| putative SanA protein [Escherichia coli O55:H7 str. CB9615]
gi|209759078|gb|ACI77851.1| hypothetical protein ECs3968 [Escherichia coli]
gi|209759084|gb|ACI77854.1| hypothetical protein ECs3968 [Escherichia coli]
gi|290764337|gb|ADD58298.1| Putative SanA protein [Escherichia coli O55:H7 str. CB9615]
gi|320645456|gb|EFX14465.1| putative SanA protein [Escherichia coli O157:H- str. 493-89]
gi|320650767|gb|EFX19224.1| putative SanA protein [Escherichia coli O157:H- str. H 2687]
gi|320656146|gb|EFX24058.1| putative SanA protein [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320666987|gb|EFX33963.1| putative SanA protein [Escherichia coli O157:H7 str. LSU-61]
Length = 230
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/209 (16%), Positives = 73/209 (34%), Gaps = 26/209 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ ++C +LL + I +++ Q ++ + P +LLG
Sbjct: 16 RRTLKIACLLLLVAGATIFIADRVMVNASKQLTWSDVNVVPARNVG----LLLGA----- 66
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 --RPGNRY-----FTRRIDTAAELYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 114
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + ++ + +I ++S +H +R+ + +GI+
Sbjct: 115 AKGVPAKVIFCDYAGFSTLDSVVRANKVFGEN---HITIISQEFHNQRAIWLAKQYGIDA 171
Query: 200 KASCS-DYLNAYYSIIPLSANFYLTELAL 227
+ D I+ L +
Sbjct: 172 IGFNAPDLEKGRGKIVRLREKLARVSAVI 200
>gi|256375417|ref|YP_003099077.1| hypothetical protein Amir_1279 [Actinosynnema mirum DSM 43827]
gi|255919720|gb|ACU35231.1| protein of unknown function DUF218 [Actinosynnema mirum DSM 43827]
Length = 215
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 10/100 (10%)
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKH----GLAESIVYNNKLLESGVERDDIKLETQSLDT 157
LY ++ +G + E++ Y LE GV I +ET++ +T
Sbjct: 44 ELYHQGVF----PRVLFTGANAPTTVKRFPRGEAVHYREHALEHGVPDAAILIETEATNT 99
Query: 158 FQNAQFSSSMIKNMQGK--NIILVSSAYHLKRSQLYFQHF 195
+N + S ++++ + + +L+S Y +RS +
Sbjct: 100 AENFKLSRALLEVEGVEVGSAVLISRPYQERRSYATCRKL 139
>gi|156740504|ref|YP_001430633.1| hypothetical protein Rcas_0485 [Roseiflexus castenholzii DSM 13941]
gi|156231832|gb|ABU56615.1| protein of unknown function DUF218 [Roseiflexus castenholzii DSM
13941]
Length = 225
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 55/185 (29%), Gaps = 26/185 (14%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
L P + IV+LG G + R + LY+ + T
Sbjct: 57 LALPGRTARADAIVVLGGGFPL-----------------RDQHAIDLYREGWAREIWRTG 99
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+ GG ++ GV T+ + + + M + + + +
Sbjct: 100 EMPGGSAVVQK------ARRLAIQQGVPAAAFVPLIT-DSTWTDGREIARMARERKVERV 152
Query: 177 ILVSSAYHLKRSQLYFQH--FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I+V+ H +R+ +H G +A N Y+ + + E +
Sbjct: 153 IIVTDWSHSRRALCVIKHHLAGSGIEAFYDGPRNPPYTPFDWWHHPEGRRIVAGELLKTF 212
Query: 235 IAYYR 239
R
Sbjct: 213 YYLLR 217
>gi|163816551|ref|ZP_02207915.1| hypothetical protein COPEUT_02741 [Coprococcus eutactus ATCC 27759]
gi|158448251|gb|EDP25246.1| hypothetical protein COPEUT_02741 [Coprococcus eutactus ATCC 27759]
Length = 218
Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGL----AESIVYNNKLLESGVERDDIKLETQS 154
LY S II +GG + E+ + +E GV RD I +E S
Sbjct: 39 RAAELYLSGHGRY----IIFTGGLGRITQKIWHKPEANKFAEVAIEKGVPRDVIFIENVS 94
Query: 155 LDTFQNAQFSSSMIKN--MQGKNIILV 179
+T +N QF+ MI + + ++I+V
Sbjct: 95 SNTGENIQFTKKMISDETISIDSVIVV 121
>gi|163753469|ref|ZP_02160593.1| putative transport-related membrane protein [Kordia algicida OT-1]
gi|161327201|gb|EDP98526.1| putative transport-related membrane protein [Kordia algicida OT-1]
Length = 226
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 70/196 (35%), Gaps = 20/196 (10%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ K + + + I ++ ++ + P K +LLG G
Sbjct: 18 KKWLKRIGFTFLVFIIGIIACNTYVELISNG--KTFNKVAEIPSNKVG----LLLGTGKY 71
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ + + RI T++LYKS K I++SG + K E +
Sbjct: 72 LKNG------KVNLFYSYRINATVKLYKSGKIKY----ILVSGDNGSKT-YDEPTTFKED 120
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ +G+ + I L+ T + S + + +NI ++S +H +R+ GI
Sbjct: 121 LIAAGIPENKIILDYAGFRTLDSVVRSKEIFQQ---ENITIISQQFHNERAIAIANAKGI 177
Query: 198 NTKASCSDYLNAYYSI 213
N + +
Sbjct: 178 NAVGFNAKNVGGRSGF 193
>gi|83594586|ref|YP_428338.1| hypothetical protein Rru_A3256 [Rhodospirillum rubrum ATCC 11170]
gi|83577500|gb|ABC24051.1| Protein of unknown function DUF218 [Rhodospirillum rubrum ATCC
11170]
Length = 226
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/228 (15%), Positives = 74/228 (32%), Gaps = 44/228 (19%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ R++ ++ G + + +L P + + IV+L G+
Sbjct: 2 GKVARRLGLLALTAFGLWLAGLALFASTVL---------PSAIEDDQTTTDAIVVLTGGS 52
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
R+ +R + + +SG V +
Sbjct: 53 E--------RLPVGLDLLAR--------------GLGRKLFLSGVGV--------EVTLD 82
Query: 137 KLLESGVE-----RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L + V+ R + L +LDT NA+ ++ + ++ LV++AYH+ RS +
Sbjct: 83 DLRAAIVDVPENLRSRVVLGHAALDTVGNAEETAHWLATEHFTSLRLVTAAYHMPRSLVE 142
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
F+ + + L +EY L+A+ R
Sbjct: 143 FRAAMPDVRIIAHPVFPGSVKQQEWWMWKGTARLMAEEYSKFLVAWLR 190
>gi|118348512|ref|XP_001007731.1| hypothetical protein TTHERM_00066930 [Tetrahymena thermophila]
gi|89289498|gb|EAR87486.1| hypothetical protein TTHERM_00066930 [Tetrahymena thermophila
SB210]
Length = 181
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ T ++Y+ + + ++ I G + ES + L + I E +S++
Sbjct: 1 MNHTAKVYQILENRNKLQSLFIVSGRGNGIKI-ESNEMASYLQSKIKKNSTILQENKSMN 59
Query: 157 TFQNAQFSSSMI-----KNMQGKNII--LVSSAYHLKRSQLYF 192
T +N FS ++ K ++ +V+S YH++R+Q+ +
Sbjct: 60 TAENLIFSYFLLWKLYNKQQSIRDFEMHIVTSDYHIERTQILY 102
>gi|119512189|ref|ZP_01631279.1| hypothetical protein N9414_13600 [Nodularia spumigena CCY9414]
gi|119463155|gb|EAW44102.1| hypothetical protein N9414_13600 [Nodularia spumigena CCY9414]
Length = 175
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 58/172 (33%), Gaps = 37/172 (21%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
+ LL L + + P +++LG S R
Sbjct: 1 MVFALPLLMWLGYQESKIEELPPQ-----AVLVLGG---------------STSHLEREK 40
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
T + I ISGG P ++GV+ ++L+ +++DT
Sbjct: 41 FTANFARQH----PSLPIWISGGSPPTFTE-------KVFAKAGVDPKRLRLDYEAVDTV 89
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY------FQHFGINTKASCS 204
N ++ K++ L++S +H++R+++ + + A S
Sbjct: 90 TNFTTLVDELQAQGIKSVYLITSEFHMRRARVIGEIVLGSRGIQLKPVAVPS 141
>gi|49474722|ref|YP_032764.1| hypothetical protein BQ12360 [Bartonella quintana str. Toulouse]
gi|49240226|emb|CAF26695.1| hypothetical protein BQ12360 [Bartonella quintana str. Toulouse]
Length = 230
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 62/194 (31%), Gaps = 40/194 (20%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L + + ++ F G+ I L P + I++L G
Sbjct: 40 LFRHLPPTALFLLMIVFFFCAGFVIFSEK---------TEQLKPPNPLPKADAIIVLTGG 90
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH--GLAESIV 133
RI + L + + ++ISG + + S
Sbjct: 91 EK------------------RIETGLNLLQQ----ELGSRLLISGVNTTTNLKRFMYSTH 128
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+L V+ ++++T NA+ S+ IK + + +V+ YH+ RS +
Sbjct: 129 ITPQLFTCCVDIGH-----KAINTKGNAEESADWIKKHHYQTVYIVTHDYHMWRSLRELK 183
Query: 194 HF--GINTKASCSD 205
+ IN A
Sbjct: 184 YLMPDINFIAYPVK 197
>gi|331657418|ref|ZP_08358380.1| protein YdcF [Escherichia coli TA206]
gi|331055666|gb|EGI27675.1| protein YdcF [Escherichia coli TA206]
Length = 205
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 69/180 (38%), Gaps = 22/180 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F G N A +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFHRITGDNPDA---PRWLSYPGFVPQLGNNADSVIFV 196
>gi|327406004|ref|YP_004346842.1| hypothetical protein Fluta_4042 [Fluviicola taffensis DSM 16823]
gi|327321512|gb|AEA46004.1| protein of unknown function DUF218 [Fluviicola taffensis DSM 16823]
Length = 217
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 12/133 (9%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V L GT+ + S+ RI + LY++ K I++SG D
Sbjct: 53 VALVLGTSRTNKHGNDNLYFSY----RIKAAVELYRAGKVKY----ILVSG-DNSITTYD 103
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E N L+++G+ + I L+ T + + +K K +I++S +H +R+
Sbjct: 104 EPTDMKNALVKAGIPANRIFLDYAGFRTLDSME---RALKVFGQKEVIVISQQFHNERAI 160
Query: 190 LYFQHFGINTKAS 202
+HFG+
Sbjct: 161 YLGEHFGMTVYGY 173
>gi|307293520|ref|ZP_07573364.1| protein of unknown function DUF218 [Sphingobium chlorophenolicum
L-1]
gi|306879671|gb|EFN10888.1| protein of unknown function DUF218 [Sphingobium chlorophenolicum
L-1]
Length = 176
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 69/208 (33%), Gaps = 47/208 (22%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I LL +G+ +L + L + + IV+L G
Sbjct: 2 IVRFIALTLLAWMLGFAWFAILLPQPL------------DGRQTDAIVVLTGG------- 42
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
RI + L + M +ISG + + +
Sbjct: 43 -----------AGRIDRGLSLLQDGAAKRM----LISG---VDRSVRPAELAAQYDAPER 84
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ I L +++DT NA ++ ++ K + L+++ +H++RS L + +
Sbjct: 85 LFACCITLGREAIDTRSNAIETAHWLERRDFKTVRLITTDWHMRRSALELRQ-------A 137
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEY 230
+ Y +P + + ++EY
Sbjct: 138 LPGRVTLVYDAVPSRPSLMM---LVREY 162
>gi|261343423|ref|ZP_05971068.1| protein SanA [Providencia rustigianii DSM 4541]
gi|282568566|gb|EFB74101.1| protein SanA [Providencia rustigianii DSM 4541]
Length = 234
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 62/178 (34%), Gaps = 16/178 (8%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+L+ + I + + + + + ++ ++LG +
Sbjct: 9 LLILAGIAFATVILLDRWISWDTAPYIYEDVEQLPARDVGMVLGTSKYYASGATNLYYT- 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+RI Y S K +++SG + H E I L+++GV I
Sbjct: 68 -----NRIKGAADAYHSGKVKY----LLLSGDNGA-HNYNEPIAMRKDLIKAGVPASKIV 117
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK--ASCSD 205
L+ T + + + N +++ +H +R+ +H GI+ + A +
Sbjct: 118 LDFAGFRTLDSVVRTKKVFD---TDNFTIITQRFHCERALFIAKHKGIDAQCLAVPTP 172
>gi|260598048|ref|YP_003210619.1| protein YdcF [Cronobacter turicensis z3032]
gi|260217225|emb|CBA31119.1| Protein ydcF [Cronobacter turicensis z3032]
Length = 260
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 44/127 (34%), Gaps = 23/127 (18%)
Query: 104 YKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNKLLESG-V 143
+ ++++GG + GL E+ + + V
Sbjct: 47 AAAHLAKESGLPLLVTGGLGHSTTFLYAAVAQHPRYNHLRTTGLTEAGILARIARDFHEV 106
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+ I +E +S + +NA+F+ +++ IL+ +R+ F +
Sbjct: 107 PDEQIIVEEKSTNCGENARFTRELLEQRGEWPARAILIQDPTMQRRTHATFTRAWRDA-P 165
Query: 202 SCSDYLN 208
S +++ +
Sbjct: 166 SPTEWRS 172
>gi|331674630|ref|ZP_08375389.1| conserved hypothetical protein [Escherichia coli TA280]
gi|331068069|gb|EGI39465.1| conserved hypothetical protein [Escherichia coli TA280]
Length = 230
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 67/194 (34%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ + C +LL + I +++ Q ++ P +LLG
Sbjct: 16 RRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVG----LLLGA----- 66
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 114
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + + + I ++S +H +R+ + +GI+
Sbjct: 115 AKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENY---ITIISQEFHNQRAIWLAKQYGIDA 171
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 172 IGFNAPDLNMKHGF 185
>gi|324990069|gb|EGC22010.1| hypothetical protein HMPREF9388_1778 [Streptococcus sanguinis
SK353]
Length = 211
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGD-------PQKHGLAESIVYNNKLLESGVERDDIKLE 151
+ + Y+ II++GG P +G E+ V LL +G+ + IK E
Sbjct: 53 KAIEAYQKGYVR----RIIVTGGRSLTGMPHPDWNGHTEAEVIIQHLLAAGIPEEAIKSE 108
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILV 179
+ S +T +N F+ + ++++ +
Sbjct: 109 SSSSNTLENVLFAKEIFDFNTVESVMFI 136
>gi|306842871|ref|ZP_07475508.1| Hypothetical protein BIBO2_2646 [Brucella sp. BO2]
gi|306286958|gb|EFM58475.1| Hypothetical protein BIBO2_2646 [Brucella sp. BO2]
Length = 162
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 13/114 (11%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAESIVYNNKLLESGVERDDIKLET 152
SR+ + L K + ++ISG P + L + + L ++ D
Sbjct: 6 SRVKAGINLLKEKRGK----RLLISGVHPSTNEEALQRATHADKSLFACCIDLDR----- 56
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF--QHFGINTKASCS 204
+L+T NA S I+ +I+V++ YH+ RS L + +
Sbjct: 57 TALNTVGNAAESERWIRANDYHRVIVVTNNYHIPRSILEMSSRMKDVEFIPYPV 110
>gi|170682034|ref|YP_001745356.1| putative SanA protein [Escherichia coli SMS-3-5]
gi|170519752|gb|ACB17930.1| putative SanA protein [Escherichia coli SMS-3-5]
Length = 227
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 69/188 (36%), Gaps = 23/188 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ + C +LL + I +++ Q + + + G +LLG
Sbjct: 13 RRTLKIGCLLLLIAGATIFIADRVMVNASQQLTWSDVNAVPARNVG---LLLGA------ 63
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 64 -RPGNRY-----FTRRIDSAAELYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIA 112
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + ++ + +I ++S +H +R+ + +GI+
Sbjct: 113 KGVPAKVIFCDYAGFSTLDSVVRANKVFSEN---HITIISQEFHNQRAIWLAKQYGIDAI 169
Query: 201 ASCSDYLN 208
+ LN
Sbjct: 170 GFNAPDLN 177
>gi|119509608|ref|ZP_01628755.1| hypothetical protein N9414_08580 [Nodularia spumigena CCY9414]
gi|119465797|gb|EAW46687.1| hypothetical protein N9414_08580 [Nodularia spumigena CCY9414]
Length = 198
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 70/190 (36%), Gaps = 37/190 (19%)
Query: 32 LFSFIGWGIIPTILLK-HLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
LF+ G + TI L R ++ Q K I++L +G + P
Sbjct: 7 LFTLAGCLGMFTIATAIPL-----RLAIALQQKPHPQAILML-SGDSSRP---------- 50
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
+ + Q I +S GDP+ + +N+ L+ G D I+
Sbjct: 51 -----------KFTREMAQEFPDLPIWVSVGDPEIRSIL--DDLDNQGLQGG---DRIQY 94
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR----SQLYFQHFGINTKASCSDY 206
+ ++ DT N + ++ +++ LV+S YH+ R + + F GI
Sbjct: 95 DNRATDTVTNFTTIVAKVQQNNIRHVYLVTSDYHMPRSQAIATIVFGSQGIAFTPVSVPS 154
Query: 207 LNAYYSIIPL 216
++ +P
Sbjct: 155 QSSQREALPR 164
>gi|146343248|ref|YP_001208296.1| hypothetical protein BRADO6468 [Bradyrhizobium sp. ORS278]
gi|146196054|emb|CAL80081.1| conserved hypothetical protein; putative exported protein
[Bradyrhizobium sp. ORS278]
Length = 221
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/212 (15%), Positives = 74/212 (34%), Gaps = 47/212 (22%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ F+ F+G+ L L+ + +P ++ + IV+L G+
Sbjct: 11 ATLGLGFFIAAVGFVGF-------LSQLRGAEIKP------ERKADGIVVLTGGS----- 52
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAESIVYNNKLL 139
SR+ + + L ++ISG P + + S+ +
Sbjct: 53 -------------SRVSDAVELLAGGYGR----RLLISGVHPTNDANDITRSLPEARSFI 95
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GI 197
V+ L+ +++T NA + K++++V+S YH+ R+ H +
Sbjct: 96 NCCVD-----LDYSAINTRSNAAQTRRWAAERGFKSLVVVTSNYHMPRAIAELSHAMPSM 150
Query: 198 NTKASCS---DYLNAYYSIIPLSANFYLTELA 226
+ + + + + L+E A
Sbjct: 151 DLIPYAVVGEKWRDEPWWTSGPTLRLLLSEYA 182
>gi|281180139|dbj|BAI56469.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 230
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 25/189 (13%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ + C +LL + I +++ Q ++ P +LLG
Sbjct: 16 RRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVG----LLLGA----- 66
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 --RPGNRY-----FTRRIDSAAELYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 114
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + ++ + +I ++S +H +R+ + +GI+
Sbjct: 115 AKGVPAKAIFCDYAGFSTLDSVVRANKVFSEN---HITIISQEFHNQRAIWLAKQYGIDA 171
Query: 200 KASCSDYLN 208
+ LN
Sbjct: 172 IGFNAPDLN 180
>gi|116622945|ref|YP_825101.1| hypothetical protein Acid_3847 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226107|gb|ABJ84816.1| protein of unknown function DUF218 [Candidatus Solibacter usitatus
Ellin6076]
Length = 204
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 14/127 (11%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET-QS 154
R+ L K I++SG P +G ES + L+ G + Q+
Sbjct: 60 RLQHAAELVKQ----GYVPRILVSG-PPGFYGTNESDAAIHWALQQGYPPEWFVAVPHQA 114
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF----QHFG----INTKASCSDY 206
T A+ + ++ + +LV+S YH R++ F + G + A+ Y
Sbjct: 115 TSTLAEAKVMLTYMRQHNIHSFLLVTSNYHTARARRIFLGAERDSGGGPEMRVVAAPDKY 174
Query: 207 LNAYYSI 213
Sbjct: 175 FTPEAWW 181
>gi|289619476|emb|CBI53759.1| unnamed protein product [Sordaria macrospora]
Length = 366
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLK 186
+E+ ++ + L GV I +E QS +T +N +F+ +++++ +LV Y +
Sbjct: 199 SEASLFASIALSLGVPSSCILIEEQSTNTGENVRFTHALLQHRGIQVDEFLLVQKPYMER 258
Query: 187 RSQLYF 192
R+ F
Sbjct: 259 RTWGTF 264
>gi|117924002|ref|YP_864619.1| hypothetical protein Mmc1_0692 [Magnetococcus sp. MC-1]
gi|117607758|gb|ABK43213.1| protein of unknown function DUF218 [Magnetococcus sp. MC-1]
Length = 229
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 68/226 (30%), Gaps = 36/226 (15%)
Query: 16 LCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
L S R I + +LL GW + + L+ Q + IV+LG G
Sbjct: 24 LKSSRRAIAYTLTTLLLVPLFGWIGLGGW------KQAAQWLVITQPPAVADAIVVLGGG 77
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
P + +I G P V +
Sbjct: 78 IPTRPKMGF---------------------QLLHQGWAKRLIFVGDRPHVLT----QVGH 112
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+ R ++ L S T + Q I+ + I+LV+ YH +R+ +H
Sbjct: 113 SYCPACDFARPEVTLLGLSRSTLDDLQRVLPHIQGGLNRRILLVTDPYHTRRADWIARHL 172
Query: 196 ----GINTKASCSD-YLNAYYSIIPLSANFYLTELALKEYIGILIA 236
GI + S+ Y P + ++ L E+ L
Sbjct: 173 LNQHGIEVRTISSNAYFKMNAPQTPWWQDLPTRQVVLSEWTKFLFY 218
>gi|320661836|gb|EFX29244.1| putative SanA protein [Escherichia coli O55:H7 str. USDA 5905]
Length = 230
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/209 (16%), Positives = 73/209 (34%), Gaps = 26/209 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ ++C +LL + I +++ Q ++ + P +LLG
Sbjct: 16 RRTLKIACLLLLVAGATIFIADRVMVNASKQLTWSDVNVVPARNVG----LLLGA----- 66
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 --RPGNRY-----FTRRIDTAAELYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 114
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + ++ + +I ++S +H +R+ + +GI+
Sbjct: 115 AKGVPAKVIFCDYAGFSTLDSVVRANKVFGEN---HITIISQEFHNQRAIWLAKQYGIDA 171
Query: 200 KASCS-DYLNAYYSIIPLSANFYLTELAL 227
+ D I+ L +
Sbjct: 172 IGFNAPDLEKGRGKIVRLRETLARVSAVI 200
>gi|191166833|ref|ZP_03028658.1| putative SanA protein [Escherichia coli B7A]
gi|193062133|ref|ZP_03043229.1| putative SanA protein [Escherichia coli E22]
gi|194427757|ref|ZP_03060304.1| putative SanA protein [Escherichia coli B171]
gi|209920557|ref|YP_002294641.1| hypothetical protein ECSE_3366 [Escherichia coli SE11]
gi|218696790|ref|YP_002404457.1| putative thioredoxin-like [Escherichia coli 55989]
gi|260845898|ref|YP_003223676.1| putative thioredoxin-like protein [Escherichia coli O103:H2 str.
12009]
gi|190903075|gb|EDV62799.1| putative SanA protein [Escherichia coli B7A]
gi|192932353|gb|EDV84951.1| putative SanA protein [Escherichia coli E22]
gi|194414265|gb|EDX30540.1| putative SanA protein [Escherichia coli B171]
gi|209913816|dbj|BAG78890.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218353522|emb|CAU99654.1| putative thioredoxin-like [Escherichia coli 55989]
gi|257761045|dbj|BAI32542.1| predicted thioredoxin-like protein [Escherichia coli O103:H2 str.
12009]
gi|323946845|gb|EGB42863.1| hypothetical protein EREG_01643 [Escherichia coli H120]
gi|324018193|gb|EGB87412.1| hypothetical protein HMPREF9542_03119 [Escherichia coli MS 117-3]
gi|324119692|gb|EGC13573.1| hypothetical protein ERBG_00478 [Escherichia coli E1167]
Length = 227
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 68/194 (35%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ + C +LL + I +++ Q ++ P+ +LLG
Sbjct: 13 RRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPERNVG----LLLGA----- 63
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 64 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 111
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + + + +I ++S +H +R+ + + I+
Sbjct: 112 AKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYSIDA 168
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 169 IGFNAPDLNMKHGF 182
>gi|313674752|ref|YP_004052748.1| hypothetical protein Ftrac_0638 [Marivirga tractuosa DSM 4126]
gi|312941450|gb|ADR20640.1| protein of unknown function DUF218 [Marivirga tractuosa DSM 4126]
Length = 204
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 72/183 (39%), Gaps = 16/183 (8%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K F LL S I + I + + SY + + I ++LG +
Sbjct: 3 KFFIRLGLFLLISAIVFAIFSNVFIITKTSSYIY--ENINNIPEKEIALVLG------TS 54
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
++ E + +R+ L+ K +++SG D + E L++
Sbjct: 55 KRNMKGEANSFFDNRMDAAAELFHKGKVKG----LLLSG-DNRTRYYNEPSDMKKALMKK 109
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV + I ++T L T ++ + K+ +++ +++ +H R+ Q++ ++ A
Sbjct: 110 GVPENVISIDTAGLSTIESVYRCKEIFKH---QDVAIITQEFHAFRALYISQYYEMDAIA 166
Query: 202 SCS 204
+
Sbjct: 167 FPA 169
>gi|170749389|ref|YP_001755649.1| hypothetical protein Mrad2831_2982 [Methylobacterium radiotolerans
JCM 2831]
gi|170655911|gb|ACB24966.1| protein of unknown function DUF218 [Methylobacterium radiotolerans
JCM 2831]
Length = 258
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 59/177 (33%), Gaps = 28/177 (15%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
PT A I RI + + L + T + + +
Sbjct: 66 HERTPTDRADGIVALTGGAQRIGDAIDLLAGGYGRRLLITGV-------NERTSRDEIAR 118
Query: 136 -----NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L+ V+ L+ ++ +T NA + ++ + + +V+S YH+ R+ +
Sbjct: 119 LNPTQRALIACCVD-----LDYRARNTIGNAIETRRWMRAHRFSTVAVVTSNYHMPRTLV 173
Query: 191 YFQHF-----GINTKASCSDYLNAYYSII-PLSANFYLTELALKEYIGILIAYYRGN 241
H + ++ +A P +A + EY+ L+++ R
Sbjct: 174 ELDHALQDSDRVLPHPVVTEAFDADRWWQNPPAARLLAS-----EYMKFLVSWVRTR 225
>gi|332637197|ref|ZP_08416060.1| hypothetical protein WcibK1_00790 [Weissella cibaria KACC 11862]
Length = 213
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 116 IIISGGDPQKHG----LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI--K 169
I+ +GG + + E+ Y + +GV D I +E +S ++ QN QF+ ++ K
Sbjct: 54 IVAAGGFGKITRDLWRIPEAEKYAEIMRAAGVPADKIFIENESTNSGQNFQFTKRLLASK 113
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHF 195
+ ++ ++VS Y +R+ Q
Sbjct: 114 QITVRSGLIVSKTYLGRRAMATAQRQ 139
>gi|157158500|ref|YP_001464548.1| putative SanA protein [Escherichia coli E24377A]
gi|193067263|ref|ZP_03048231.1| putative SanA protein [Escherichia coli E110019]
gi|300922298|ref|ZP_07138423.1| hypothetical protein HMPREF9548_00564 [Escherichia coli MS 182-1]
gi|301325559|ref|ZP_07219027.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|157080530|gb|ABV20238.1| putative SanA protein [Escherichia coli E24377A]
gi|192959220|gb|EDV89655.1| putative SanA protein [Escherichia coli E110019]
gi|300421360|gb|EFK04671.1| hypothetical protein HMPREF9548_00564 [Escherichia coli MS 182-1]
gi|300847610|gb|EFK75370.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|320201996|gb|EFW76571.1| SanA protein [Escherichia coli EC4100B]
Length = 227
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 68/194 (35%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ + C +LL + I +++ Q ++ P+ +LLG
Sbjct: 13 RRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPERNVG----LLLGA----- 63
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 64 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQKALI 111
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + + + +I ++S +H +R+ + + I+
Sbjct: 112 AKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYSIDA 168
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 169 IGFNAPDLNMKHGF 182
>gi|153806679|ref|ZP_01959347.1| hypothetical protein BACCAC_00949 [Bacteroides caccae ATCC 43185]
gi|149131356|gb|EDM22562.1| hypothetical protein BACCAC_00949 [Bacteroides caccae ATCC 43185]
Length = 212
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RIF T+ LYK+ K + I+ISG D +K E L++ GV I L+
Sbjct: 69 RIFATLELYKAGKINY----ILISG-DNRKENYNEPEEMKKALMQRGVPEKYIYLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + + ++S +H +R+ + GIN + +NAY +
Sbjct: 124 RTLDSVVRAKEV---FGQSRLTIISQRFHNERAIYLAEKNGINAIGYNAKDVNAYSGL 178
>gi|116071502|ref|ZP_01468770.1| hypothetical protein BL107_05119 [Synechococcus sp. BL107]
gi|116065125|gb|EAU70883.1| hypothetical protein BL107_05119 [Synechococcus sp. BL107]
Length = 184
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 18/115 (15%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG-VERDDIKLETQ 153
R RL + + +++SGG ++ Y LL+ + + + L+ +
Sbjct: 41 DRERMGARLARQ-----LELPLLVSGGSNRE--------YATWLLQEERLNPERVTLDYR 87
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL----YFQHFGINTKASCS 204
+ DT N +++ ++++LV+S HL RS GI+
Sbjct: 88 ARDTLSNFTSLVDELQSEGIQHVLLVTSENHLPRSMAVGQVVAGSRGIHLTGVPV 142
>gi|74313520|ref|YP_311939.1| hypothetical protein SSON_3119 [Shigella sonnei Ss046]
gi|73856997|gb|AAZ89704.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 191
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY K +++SG + +K+ E+ L+ GV I +
Sbjct: 37 RIDTAAALYHVGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKGVPAKVIFCDYAGF 91
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + +I ++S +H +R+ + +GI+ + LN +
Sbjct: 92 STLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGF 146
>gi|293412464|ref|ZP_06655187.1| conserved hypothetical protein [Escherichia coli B354]
gi|291469235|gb|EFF11726.1| conserved hypothetical protein [Escherichia coli B354]
Length = 230
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ GV I +
Sbjct: 76 RIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKGVPAKVIFCDYAGF 130
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + +I ++S +H +R+ + +GI+ + LN +
Sbjct: 131 STLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGF 185
>gi|288802314|ref|ZP_06407754.1| SanA protein [Prevotella melaninogenica D18]
gi|288335281|gb|EFC73716.1| SanA protein [Prevotella melaninogenica D18]
Length = 211
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 24/164 (14%)
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
LLG PS +RI T+ LYK K +IISG ++ G E
Sbjct: 56 LLG-----TNPKARGGKRPSSFYMARIKATVELYKHGKFKQ----LIISGD--KREGYDE 104
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ L+ GV I ++ Q T + + ++ ++I++S +H +RS
Sbjct: 105 PQTMRHDLIVRGVPDSIITMDGQGYRTLLSMRNIK---QHFGVNDMIIISQKWHNERSIF 161
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
I +D + +I ++E + +
Sbjct: 162 LADKMNIKAVGYNADDVRHPRAIWTH----------IRELLARV 195
>gi|332188414|ref|ZP_08390138.1| hypothetical protein SUS17_3520 [Sphingomonas sp. S17]
gi|332011560|gb|EGI53641.1| hypothetical protein SUS17_3520 [Sphingomonas sp. S17]
Length = 177
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 58/164 (35%), Gaps = 38/164 (23%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
+ L + +L L P + IV+ G
Sbjct: 4 LIGLVALGWCLGFAAFMLS---------LPHPLENNTTDAIVVPTGG------------- 41
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY--NNKLLESGVERD 146
RI + L ++ + M +++G P + + Y L +
Sbjct: 42 -----AGRIDRGIALLQAHQAKRM----LVTGVAPGVRPIDLARTYRTAPSLFSCCI--- 89
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
D+ LE ++DT NA+ ++ ++ + + LV+S +HL R+++
Sbjct: 90 DLGLE--AVDTRSNAEETARWVREHGYRTVRLVTSDWHLPRARM 131
>gi|332086610|gb|EGI91752.1| hypothetical protein SD15574_3629 [Shigella dysenteriae 155-74]
Length = 203
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ GV I +
Sbjct: 49 RIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKGVPAKVIFCDYAGF 103
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + I S +H +R+ + +GI+ + LN +
Sbjct: 104 STLDSVVRAKKVFGENHITTI---SQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGF 158
>gi|262403636|ref|ZP_06080194.1| hypothetical protein VOA_001624 [Vibrio sp. RC586]
gi|262350140|gb|EEY99275.1| hypothetical protein VOA_001624 [Vibrio sp. RC586]
Length = 286
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 12/93 (12%)
Query: 107 CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES------GVERDDIKLETQSLDTFQN 160
+ ++ GG ++E+ + + + LE QS T +N
Sbjct: 36 QCHENSSALVVFCGGITAGQSVSEAQCMYEYFEQQIQQFGRSFPQVKVLLEQQSTSTVEN 95
Query: 161 AQFSSSM------IKNMQGKNIILVSSAYHLKR 187
+ + + +K + LVS+ YHLKR
Sbjct: 96 IEHVTQVLLASGELKAGAKLTLTLVSNDYHLKR 128
>gi|67923734|ref|ZP_00517200.1| Protein of unknown function DUF218 [Crocosphaera watsonii WH 8501]
gi|67854442|gb|EAM49735.1| Protein of unknown function DUF218 [Crocosphaera watsonii WH 8501]
Length = 197
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 56/181 (30%), Gaps = 46/181 (25%)
Query: 32 LFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
LF + + L K LQ + +P I +LG
Sbjct: 24 LFPILCLATVGLWLGYKQLQSHFVQP----------EAIFVLGG---------------- 57
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R +L I +S G PQ + +GV D + L
Sbjct: 58 --HKDRESFAAQLA----LKHPDLPIWVSSGSPQHYVT-------QIFSNAGVSGDRLHL 104
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY----FQHFGI--NTKASCS 204
+ ++ DT N +K ++ L++S H+ R+++ F GI + S
Sbjct: 105 DYRAKDTVTNFTSLVKELKEQGIDSVYLITSDNHMNRARIIGEIVFGAQGIILKPLSVPS 164
Query: 205 D 205
Sbjct: 165 K 165
>gi|262394509|ref|YP_003286363.1| SanA protein [Vibrio sp. Ex25]
gi|262338103|gb|ACY51898.1| SanA protein [Vibrio sp. Ex25]
Length = 224
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 76/216 (35%), Gaps = 30/216 (13%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I +S LL S I ++L+ + + PQ + V+LG I +
Sbjct: 2 ILSISVLSLLVSVIAID--RWVVLQAKESIFTEYEPIPQHEVA----VVLGTSKYIGKIL 55
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
RI + LY K ++SG + E LL++G
Sbjct: 56 NTYYTH-------RINAAIELYNQGKVKQ----FLLSGDNA-HRSYNEPWTMKRDLLKAG 103
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V + I L+ T + + + + + ++V+ +H +R+ + I+ +
Sbjct: 104 VPEEVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVTQRFHCERALFIADAYNIDAQ-- 158
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ + N T + ++E + + A+
Sbjct: 159 -------CLAVAGPTTNKQKTSMRIRELLARVKAFL 187
>gi|1073424|pir||S53980 hypothetical protein A - Escherichia coli
gi|410152|gb|AAA24246.1| Orf A [Escherichia coli]
Length = 202
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/160 (15%), Positives = 58/160 (36%), Gaps = 31/160 (19%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I ++ + + ++ISGG + G E+ + +
Sbjct: 4 IDAACKIARDQQI-----PLLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRREATILADI 58
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQH 194
+ + + I +E QS + +NA+FS +++ + I+V +R+ F+
Sbjct: 59 AHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQDPTMQRRTMATFRR 118
Query: 195 F-GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
G N + +Y +P N + + + + G+
Sbjct: 119 MTGDNPD---APRWLSYPGFVPQLGNNADSVIFINQLQGL 155
>gi|302336857|ref|YP_003802063.1| protein of unknown function DUF218 [Spirochaeta smaragdinae DSM
11293]
gi|301634042|gb|ADK79469.1| protein of unknown function DUF218 [Spirochaeta smaragdinae DSM
11293]
Length = 240
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 4/146 (2%)
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ R P ++ + K+ +++SG + +K E + L+E
Sbjct: 78 LGTSRYRPGGKTNLYFRYRIEAAKALFDAGKVRYLLVSGDNARKS-YNEPVEMRQALVEM 136
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV D I L+ T + + + I+VS +H +R+ +HFGI+ A
Sbjct: 137 GVPIDRIVLDYAGFRTLDSVVRCQEV---FGQDHFIIVSQRFHNERALYIARHFGIDAVA 193
Query: 202 SCSDYLNAYYSIIPLSANFYLTELAL 227
+ + Y ++ AL
Sbjct: 194 FNAKDVGGYSGRRIRGREYFARVKAL 219
>gi|309793653|ref|ZP_07688079.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|308122610|gb|EFO59872.1| conserved hypothetical protein [Escherichia coli MS 145-7]
Length = 227
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 69/194 (35%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ + C +LL + I +++ Q ++ P+ +LLG
Sbjct: 13 RRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPERNVG----LLLGA----- 63
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 64 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 111
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + + + +I ++S +H +R+ + + I+T
Sbjct: 112 AKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYSIDT 168
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 169 IGFNAPDLNMKHGF 182
>gi|170768284|ref|ZP_02902737.1| protein YdcF [Escherichia albertii TW07627]
gi|170123050|gb|EDS91981.1| protein YdcF [Escherichia albertii TW07627]
Length = 266
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 18/146 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G +IPTI A R P S T LY + QH
Sbjct: 29 FSNEALYPADCVIL--AGNAVIPTIDAACKIARDRQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEASILADIAHQFWHIPHEKIWIEDQSTNCGENARFSVALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQH 194
+ I++ +R+ F
Sbjct: 140 ATERIHTAIIIQDPTMQRRTMATFHR 165
>gi|240851278|ref|YP_002972681.1| hypothetical membrane protein [Bartonella grahamii as4aup]
gi|240268401|gb|ACS51989.1| hypothetical membrane protein [Bartonella grahamii as4aup]
Length = 229
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 68/204 (33%), Gaps = 43/204 (21%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
V + + F+ FI + L P+ + I
Sbjct: 36 VCFLFRYFPPTTLTLAIIVFIFWGGFIVFSEKTERL------------SPPKPLPKADAI 83
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH--G 127
++L G +RI + L + + ++ISG + + G
Sbjct: 84 IVLTGGE------------------NRIETGLHLLQ----KGLGSRLLISGVNTTTNLKG 121
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+ +L+ ++ Q+++T NA+ S++ IK K + +V+ YH+ R
Sbjct: 122 FMHNRHITPRLVSCCIDIGH-----QAINTRGNAKESATWIKKHHFKTLYIVTHDYHMWR 176
Query: 188 SQLYFQHF--GINTKASCSDYLNA 209
S ++ I+ A NA
Sbjct: 177 SMRELKYLMPDIHFIAYPVKKSNA 200
>gi|110643330|ref|YP_671060.1| hypothetical protein ECP_3177 [Escherichia coli 536]
gi|110344922|gb|ABG71159.1| hypothetical protein YgjQ [Escherichia coli 536]
Length = 227
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 23/188 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ + C +LL + I ++ + ++ ++ +LLG
Sbjct: 13 RRTLKIGCLLLLIAG-ATLFIADRVMVNASKQLTWSDVNVVPARNVG--LLLGA------ 63
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 64 -RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIA 112
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + ++ + +I ++S +H +R+ + +GI+
Sbjct: 113 KGVPAKVIFCDYAGFSTLDSVVRANKVFSEN---HITIISQEFHNQRAIWLAKQYGIDAI 169
Query: 201 ASCSDYLN 208
+ LN
Sbjct: 170 GFNAPDLN 177
>gi|114566272|ref|YP_753426.1| hypothetical protein Swol_0732 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337207|gb|ABI68055.1| hypothetical protein Swol_0732 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 211
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/232 (13%), Positives = 71/232 (30%), Gaps = 56/232 (24%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I ++ + F + G GI+ + + + I++L
Sbjct: 13 IILLALLAVFFRYAGVGIVSS-----------------DSPEKADFIIVLMG-------- 47
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQH--------SMHCTIIISGGDPQKHGLAESIVY 134
RI + LY+ ++ S G ++ +
Sbjct: 48 ---------SGPDRILGAVELYEKGYAPYIMMVENWQPGYELLESRGV---ELPRDAELA 95
Query: 135 NNKLLESGVERDD-IKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLY 191
+ ++ G+ + I L + T A + +K ++LVSS +H KR+
Sbjct: 96 ASVGVQLGIPEEAFIILPGDARSTQDEALIVTQYLKEQQAGVDMVLLVSSKFHSKRAAKI 155
Query: 192 F------QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
F + + + Y + + S + + EY+ ++ Y
Sbjct: 156 FCWALADSGQDVKVLSCPTPYDDFNAAAWWQSR--EDAKRVVSEYVKLVNFY 205
>gi|328541756|ref|YP_004301865.1| hypothetical protein SL003B_0132 [polymorphum gilvum SL003B-26A1]
gi|326411508|gb|ADZ68571.1| Hypothetical transmembrane protein [Polymorphum gilvum SL003B-26A1]
Length = 196
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 76/208 (36%), Gaps = 39/208 (18%)
Query: 39 GIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF 98
G++ + + L F+ + + + IV+L G RI
Sbjct: 11 GLVAGLGISFLLFAQSVVSIRAPEEASADGIVVLTGG------------------QDRIE 52
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
+ L + + ++ISG P + E + L V+ D ++L+
Sbjct: 53 RAVGLLQEERAR----RLLISGVYPATTDRQIVERTSGDLPLFRCCVDLDR-----KALN 103
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASCS---DYLNAYY 211
T NA +++ + +++LV+SAYHL R+ L + + D + + +
Sbjct: 104 TVGNAVETAAWARTHGFSSLLLVTSAYHLPRAALELKAVMPELELVPYPVFAEDLMLSSW 163
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYR 239
P + L+E++ +A R
Sbjct: 164 YRRPQTIRL-----LLREFVKYTLARLR 186
>gi|82545342|ref|YP_409289.1| hypothetical protein SBO_2947 [Shigella boydii Sb227]
gi|81246753|gb|ABB67461.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 227
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 68/194 (35%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ ++C +LL + I +++ Q ++ P +LLG
Sbjct: 13 RRTLKIACLLLLVAGATIFIADRVMVNASKQLTWSDVNAVPARNVG----LLLGA----- 63
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 64 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQKALI 111
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + + + +I ++S +H +R+ + + I+
Sbjct: 112 AKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYSIDA 168
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 169 IGFNAPDLNMKHGF 182
>gi|283785335|ref|YP_003365200.1| hypothetical protein ROD_16241 [Citrobacter rodentium ICC168]
gi|282948789|emb|CBG88385.1| conserved hypothetical protein [Citrobacter rodentium ICC168]
Length = 263
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 18/146 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
+ + +VL G +IPTI A + P S T LY + QH
Sbjct: 27 FHGETAYPADCVVL--AGNAVIPTIDAACRIAHEQRIPLLISGGIGHSTTFLYAAIAQHP 84
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMI-- 168
+ TI +G AE+ + + + + D I L+ S + +NA+FS+ +I
Sbjct: 85 RYNTIRTTG-------RAEASILGDIARQFWQIPADKIWLDEHSTNCGENARFSAKIIAG 137
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQH 194
I+V +R+ F+
Sbjct: 138 AAEPINTAIVVQDPTMQRRTVATFRR 163
>gi|222033167|emb|CAP75907.1| Protein ydcF [Escherichia coli LF82]
gi|312946000|gb|ADR26827.1| hypothetical protein NRG857_07000 [Escherichia coli O83:H1 str. NRG
857C]
gi|320195624|gb|EFW70249.1| Protein ydcF [Escherichia coli WV_060327]
Length = 266
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 69/180 (38%), Gaps = 22/180 (12%)
Query: 58 LSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMRLYKSCKQHS 111
S + + ++L G ++PTI A + P S T LY + QH
Sbjct: 29 FSGEVPYQADCVIL--AGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHP 86
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+ TI +G AE+ + + + + + I +E QS + +NA+FS +++
Sbjct: 87 HYNTIRTTG-------RAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQ 139
Query: 171 M--QGKNIILVSSAYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+V +R+ F G N + +Y +P N + + +
Sbjct: 140 AVERVHTAIVVQDPTMQRRTMATFHRITGDNPD---APRWLSYPGFVPQLGNNADSVIFV 196
>gi|24114381|ref|NP_708891.1| hypothetical protein SF3126 [Shigella flexneri 2a str. 301]
gi|30064429|ref|NP_838600.1| hypothetical protein S3333 [Shigella flexneri 2a str. 2457T]
gi|24053550|gb|AAN44598.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30042688|gb|AAP18411.1| hypothetical protein S3333 [Shigella flexneri 2a str. 2457T]
gi|281602471|gb|ADA75455.1| putative membrane protein [Shigella flexneri 2002017]
gi|313648419|gb|EFS12862.1| hypothetical protein SF2457T_3144 [Shigella flexneri 2a str. 2457T]
gi|332754353|gb|EGJ84719.1| hypothetical protein SF274771_3702 [Shigella flexneri 2747-71]
gi|333014857|gb|EGK34202.1| hypothetical protein SFK304_3931 [Shigella flexneri K-304]
Length = 230
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 69/194 (35%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ ++C +LL + I +++ Q ++ P +LLG
Sbjct: 16 RRTLKIACLLLLVAGATIFIADRVMVNASKQLTWGDVNAVPARNVG----LLLGA----- 66
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALI 114
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + + + +I ++S +H +R+ + +GI+
Sbjct: 115 AKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRTIWLAKQYGIDA 171
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 172 IGFNAPDLNMKHGF 185
>gi|118360028|ref|XP_001013252.1| hypothetical protein TTHERM_00297190 [Tetrahymena thermophila]
gi|89295019|gb|EAR93007.1| hypothetical protein TTHERM_00297190 [Tetrahymena thermophila
SB210]
Length = 194
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 61/152 (40%), Gaps = 24/152 (15%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSC--------KQHSM 112
+ + NII++LG + + + Y R+ RL++S K
Sbjct: 7 DLQNEINIIIVLG---LKLKEVSQNKYLMENFLYDRLEFANRLFQSNLVDEQQINKDIQT 63
Query: 113 HCTIIISG-GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFS-----S 165
II+SG G ES + L + + + + E QS+ T +N FS
Sbjct: 64 KSCIILSGKGQIGN----ESYMMKEYLKKTYKYQDETLIQEEQSMTTVENFIFSFFQIWK 119
Query: 166 SMIKNMQGK--NIILVSSAYHLKRSQLYFQHF 195
+N + K NI +V+S YH RSQ + F
Sbjct: 120 IFERNYKEKKLNISIVTSDYHKDRSQYILECF 151
>gi|268590269|ref|ZP_06124490.1| protein SanA [Providencia rettgeri DSM 1131]
gi|291314553|gb|EFE55006.1| protein SanA [Providencia rettgeri DSM 1131]
Length = 234
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/215 (14%), Positives = 70/215 (32%), Gaps = 21/215 (9%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+RK F +++ + I + I + + + ++ ++LG
Sbjct: 1 MRKRLFFG--LIILAGIAFTTIMLLDRWISWDTAPYIYEDVEKLPARDVGMVLGTSKYYA 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ + RI Y S K +++SG + H E I L+
Sbjct: 59 SGVNNLYYT------YRIKGAAEAYHSGKVKY----LLLSGDNGA-HNYNEPINMRKDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ GV I L+ T + + + N +++ +H +R+ +H GI+
Sbjct: 108 KEGVPASKIVLDFAGFRTLDSVVRTKKVFD---TDNFTIITQRFHCERAVFIAKHKGIDA 164
Query: 200 K----ASCSD-YLNAYYSIIPLSANFYLTELALKE 229
+ + S Y + + +E
Sbjct: 165 QCLAVPTPSGMYRVRVREVFARLGALADLYILKRE 199
>gi|323350871|ref|ZP_08086529.1| hypothetical protein HMPREF9398_0577 [Streptococcus sanguinis
VMC66]
gi|322122853|gb|EFX94559.1| hypothetical protein HMPREF9398_0577 [Streptococcus sanguinis
VMC66]
Length = 211
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 11/88 (12%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGD-------PQKHGLAESIVYNNKLLESGVERDDIKLE 151
+ + Y+ II++GG P +G E+ V LL +G+ + IK E
Sbjct: 53 KAIEAYQKGYVR----RIIVTGGRSLTGMPHPDWNGHTEAEVIIQHLLAAGIPEEAIKSE 108
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILV 179
+ S +T +N F+ + + ++ +
Sbjct: 109 SSSSNTLENVLFAKEIFDFKTVETVMFI 136
>gi|149188918|ref|ZP_01867208.1| SanA protein [Vibrio shilonii AK1]
gi|148837338|gb|EDL54285.1| SanA protein [Vibrio shilonii AK1]
Length = 241
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/226 (16%), Positives = 75/226 (33%), Gaps = 23/226 (10%)
Query: 7 FLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG 66
L + L +++R ++C+ L+ + I + + R L S +
Sbjct: 10 LLSSTVLSFLKRALR----IACYTLVLFVVFIASIDRWVSWQAED---RILTSIDDIDNV 62
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ V+LG + T+ RI + LY K ++SG +
Sbjct: 63 QVAVVLGTSKYLGRTLNEYYSH-------RIEAAIDLYNEGKVSH----FLLSGDNA-HR 110
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E LL + V I L+ T + + + + ++++ +H +
Sbjct: 111 SYNEPWTMKRDLLRAEVPEPAIHLDYAGFRTLDSIVRAKKIFD---TDDFLIITQKFHCE 167
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSI-IPLSANFYLTELALKEYI 231
R+ + + IN + + L F T+ L YI
Sbjct: 168 RALFIARSYDINATCLAVSGPTSKSGFSVRLREVFARTKAFLDLYI 213
>gi|186681947|ref|YP_001865143.1| hypothetical protein Npun_F1508 [Nostoc punctiforme PCC 73102]
gi|186464399|gb|ACC80200.1| protein of unknown function DUF218 [Nostoc punctiforme PCC 73102]
Length = 232
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 65/185 (35%), Gaps = 49/185 (26%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+ W LL + ++F+ L+F+ I + + +
Sbjct: 17 FANLWQLLQKLTGVLYFVLGTWLIFTTITLVFASS--------------------QPIDA 56
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
++LG S R +L K Q I+IS G P
Sbjct: 57 FLVLGG------------------SIRRETYVAQLAKQYPQT----PILISHGSP---DP 91
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+++ +L+E ++ LE + TF+N + +++ ++L++S HL R+
Sbjct: 92 CIWLIFQPELVELQ----NVWLEKCANSTFENFYYGIPILRRWGVHKVMLITSPSHLPRA 147
Query: 189 QLYFQ 193
+ Q
Sbjct: 148 KWMAQ 152
>gi|254292005|ref|ZP_04962784.1| sanA protein [Vibrio cholerae AM-19226]
gi|150422082|gb|EDN14050.1| sanA protein [Vibrio cholerae AM-19226]
Length = 254
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 69/203 (33%), Gaps = 22/203 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ + HL RK+ ++++ G I + Q + Q
Sbjct: 15 VFSALAHLRRLPWRKLSQTLLWLVIGVLAGLLAIDRWVSWQTQN---NIINDAQNTPPFQ 71
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ V+LG I T+ +RI + LY+ K + ++SG +
Sbjct: 72 VAVVLGTSKYIGKTLNEYYT-------NRIDAAIALYQQGKVRN----FLLSGDNA-HRS 119
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E LL +G+ ++I L+ T + + + N ++++ +H +R
Sbjct: 120 YNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFD---TDNFLIITQRFHCER 176
Query: 188 SQLYFQHFGIN----TKASCSDY 206
+ ++ I S +
Sbjct: 177 ALFIARYQDIQASCLAVPGPSSH 199
>gi|262184622|ref|ZP_06044043.1| hypothetical protein CaurA7_11562 [Corynebacterium aurimucosum ATCC
700975]
Length = 194
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 48/172 (27%), Gaps = 25/172 (14%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+++LG SRI Y + + II GG
Sbjct: 3 YVIVLGAAQYDGRP-------------SRILRGRVRYAAEYAAAHDLPIITVGGKLPGDR 49
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ V L + + + + LDT + + ++++ H R
Sbjct: 50 FTEAGVARALLDD---DPLHVTALEEGLDTRSELAAARE---KLGVSEAVIITDPLHRLR 103
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ L + GI + Y + IP E G+ R
Sbjct: 104 TFLIARQEGIRATVLGTPYYPSPRFSIPWWRYLA------HETGGLAYLGLR 149
>gi|220908702|ref|YP_002484013.1| hypothetical protein Cyan7425_3327 [Cyanothece sp. PCC 7425]
gi|219865313|gb|ACL45652.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7425]
Length = 202
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 50/173 (28%), Gaps = 44/173 (25%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+RKI F+ F G +P L Y +P I+LL G
Sbjct: 2 LRKILFLG-----FILFWIGFVPLRL-AIAHQQYPQP----------QAILLL-EGHRQ- 43
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
RI + I +G +
Sbjct: 44 ----------------RIPFAAEFWNQHPT----LPIWFTGSRTDRPRN------QRIFQ 77
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
++GV + I + +S DT N + ++ L++S YH+ R+
Sbjct: 78 QAGVPAEMIHYDRRSTDTVTNFTAIVRDLVRQDIHHVFLITSDYHMPRASAIA 130
>gi|327460113|gb|EGF06452.1| hypothetical protein HMPREF9378_1681 [Streptococcus sanguinis SK1]
gi|327488705|gb|EGF20505.1| hypothetical protein HMPREF9395_2307 [Streptococcus sanguinis
SK1058]
Length = 211
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGD-------PQKHGLAESIVYNNKLLESGVERDDIKLE 151
+ Y+ II++GG P +G E+ V LL +G+ + IK E
Sbjct: 53 RAIEAYQKGYVR----RIIVTGGRSLTGTPHPDWNGHTEAEVIIQHLLAAGIPEEAIKSE 108
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILV 179
+ S +T +N F+ + + ++ +
Sbjct: 109 SSSSNTLENVLFAKEIFDFNTVETVMFI 136
>gi|148975674|ref|ZP_01812505.1| hypothetical protein VSWAT3_26201 [Vibrionales bacterium SWAT-3]
gi|145964747|gb|EDK29999.1| hypothetical protein VSWAT3_26201 [Vibrionales bacterium SWAT-3]
Length = 292
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLES----GVE--RDDIKLETQSLDTFQNAQF-SSSMI 168
+ GG + ++E+ + E V I L+ S +T +N Q ++ MI
Sbjct: 48 VAFCGGVTKGQSISEADAMHRYFRELESLREVPFTLGAILLDQLSTNTVENIQNLAAEMI 107
Query: 169 KNMQGKN-----IILVSSAYHLKR 187
K+ I VS+ YHL+R
Sbjct: 108 KSGLFTRGQSVKITFVSNDYHLQR 131
>gi|323165039|gb|EFZ50829.1| hypothetical protein SS53G_4502 [Shigella sonnei 53G]
Length = 203
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY K +++SG + +K+ E+ L+ GV I +
Sbjct: 49 RIDTAAALYHVGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKGVPAKVIFCDYAGF 103
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + +I ++S +H +R+ + +GI+ + LN +
Sbjct: 104 STLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGF 158
>gi|326383401|ref|ZP_08205088.1| hypothetical protein SCNU_10711 [Gordonia neofelifaecis NRRL
B-59395]
gi|326197807|gb|EGD54994.1| hypothetical protein SCNU_10711 [Gordonia neofelifaecis NRRL
B-59395]
Length = 223
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 8/112 (7%)
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
+R+ + ++S +I+SG D G E V L G+ + +
Sbjct: 72 GARLDVAVAAFRSGHVE----RVIVSGNDADDAGN-EVRVMRAYLEAQGIPASALVDDPL 126
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
++T NA + ++V+ +H+ R+ + +GI +
Sbjct: 127 GVNT--NAT-CRRAATVYGVTSAVIVTQDFHVARAVTLCRAWGIEAWGVIAP 175
>gi|209515748|ref|ZP_03264611.1| GCN5-related N-acetyltransferase [Burkholderia sp. H160]
gi|209503775|gb|EEA03768.1| GCN5-related N-acetyltransferase [Burkholderia sp. H160]
Length = 358
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDP-QKHGLAESIVYNNKLLE-SGVERDDIK 149
++ +R+ + LY++ + ++ SG ++ + +E ++ + +
Sbjct: 28 ETRARMDCAVALYQARRV----ALVVTSGWAYRNDTAISLAEAMRRYAIEAHDLDGNVVV 83
Query: 150 LETQSLDTFQNAQFSS-SMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ + DT +A F+ + ++ +++V+S YH R+ F
Sbjct: 84 AQNSARDTVGDAVFTKLRLALPLRWSRVMVVTSTYHGARALEIF 127
>gi|187731370|ref|YP_001881843.1| putative SanA protein [Shigella boydii CDC 3083-94]
gi|187428362|gb|ACD07636.1| putative SanA protein [Shigella boydii CDC 3083-94]
Length = 227
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 68/194 (35%), Gaps = 25/194 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R+ ++C +LL + I +++ Q ++ P +LLG
Sbjct: 13 RRTLKIACLLLLVAGATIFIADRVMVNASKQLTWSDVNAVPARNVG----LLLGA----- 63
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 64 --RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQKALI 111
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
GV I + T + + + +I ++S +H +R+ + + I+
Sbjct: 112 AKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYSIDA 168
Query: 200 KASCSDYLNAYYSI 213
+ LN +
Sbjct: 169 IGFNAPDLNMKHGF 182
>gi|15641199|ref|NP_230831.1| sanA protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|153823229|ref|ZP_01975896.1| sanA protein [Vibrio cholerae B33]
gi|227081358|ref|YP_002809909.1| sanA protein [Vibrio cholerae M66-2]
gi|229505220|ref|ZP_04394730.1| SanA protein [Vibrio cholerae BX 330286]
gi|229511110|ref|ZP_04400589.1| SanA protein [Vibrio cholerae B33]
gi|229518229|ref|ZP_04407673.1| SanA protein [Vibrio cholerae RC9]
gi|229529726|ref|ZP_04419116.1| SanA protein [Vibrio cholerae 12129(1)]
gi|229608239|ref|YP_002878887.1| SanA protein [Vibrio cholerae MJ-1236]
gi|254226711|ref|ZP_04920288.1| sanA protein [Vibrio cholerae V51]
gi|254848312|ref|ZP_05237662.1| sanA protein [Vibrio cholerae MO10]
gi|255745594|ref|ZP_05419542.1| SanA protein [Vibrio cholera CIRS 101]
gi|262158332|ref|ZP_06029448.1| SanA protein [Vibrio cholerae INDRE 91/1]
gi|298498712|ref|ZP_07008519.1| sanA protein [Vibrio cholerae MAK 757]
gi|9655663|gb|AAF94345.1| sanA protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|125620772|gb|EAZ49129.1| sanA protein [Vibrio cholerae V51]
gi|126519243|gb|EAZ76466.1| sanA protein [Vibrio cholerae B33]
gi|227009246|gb|ACP05458.1| sanA protein [Vibrio cholerae M66-2]
gi|229333500|gb|EEN98986.1| SanA protein [Vibrio cholerae 12129(1)]
gi|229344944|gb|EEO09918.1| SanA protein [Vibrio cholerae RC9]
gi|229351075|gb|EEO16016.1| SanA protein [Vibrio cholerae B33]
gi|229357443|gb|EEO22360.1| SanA protein [Vibrio cholerae BX 330286]
gi|229370894|gb|ACQ61317.1| SanA protein [Vibrio cholerae MJ-1236]
gi|254844017|gb|EET22431.1| sanA protein [Vibrio cholerae MO10]
gi|255736669|gb|EET92066.1| SanA protein [Vibrio cholera CIRS 101]
gi|262029773|gb|EEY48421.1| SanA protein [Vibrio cholerae INDRE 91/1]
gi|297543045|gb|EFH79095.1| sanA protein [Vibrio cholerae MAK 757]
gi|327483886|gb|AEA78293.1| SanA protein [Vibrio cholerae LMA3894-4]
Length = 254
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 69/203 (33%), Gaps = 22/203 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ + HL RK+ ++ + G I + Q + Q
Sbjct: 15 VFSALAHLRRLPWRKLSQTLLWLTIGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPFQ 71
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ V+LG I T+ +RI + LY+ K + ++SG +
Sbjct: 72 VAVVLGTSKYIGKTLNEYYT-------NRIDAAIALYQQGKVRN----FLLSGDNA-HRS 119
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E LL +G+ ++I L+ T + + + N ++++ +H +R
Sbjct: 120 YNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFD---TDNFLIITQRFHCER 176
Query: 188 SQLYFQHFGIN----TKASCSDY 206
+ ++ I S++
Sbjct: 177 ALFIARYQDIQASCLAVPGPSNH 199
>gi|148262062|ref|YP_001236189.1| hypothetical protein Acry_3082 [Acidiphilium cryptum JF-5]
gi|146403743|gb|ABQ32270.1| protein of unknown function DUF218 [Acidiphilium cryptum JF-5]
Length = 218
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 47/143 (32%), Gaps = 27/143 (18%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
IV+L G R+ + L + ++ISG
Sbjct: 58 PHAGGIVVLTGG------------------ADRVKAGLELLMA----GAAPRLLISG--- 92
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+G +++ + DI + + T NA+ +++ ++++V++ Y
Sbjct: 93 AGNGTYLGDFTARDGIDANAKATDITVGHAAATTRGNARETAAWASRHHIGSLVVVTADY 152
Query: 184 HLKRSQLYFQHF--GINTKASCS 204
H+ R+ L G+
Sbjct: 153 HMPRALLELHRALPGVTLIPEPV 175
>gi|167751187|ref|ZP_02423314.1| hypothetical protein EUBSIR_02173 [Eubacterium siraeum DSM 15702]
gi|167655902|gb|EDS00032.1| hypothetical protein EUBSIR_02173 [Eubacterium siraeum DSM 15702]
Length = 201
Score = 55.6 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 54/151 (35%), Gaps = 39/151 (25%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ + I LLG P LY+ + I+ SGG
Sbjct: 19 PQKVDAIFLLGGSHPEQPE-----------------YAAELYRQ----GLTDWIVPSGGV 57
Query: 123 PQKHG-----LAESIVYN-----------NKLLESGVERDDIKLETQSLDTFQNAQFSSS 166
K +++ +Y+ + L+++GV + I E++S T NA S
Sbjct: 58 SVKEEKWHGVRSKAEIYSGDYRSDCEFFTDVLVKNGVPQTAIIEESKSGHTRDNAFLSRK 117
Query: 167 MIKNMQ--GKNIILVSSAYHLKRSQLYFQHF 195
+ K+ I+V A+H +R + +Q
Sbjct: 118 AVDEKGIMIKSGIIVCKAFHARRCLMLYQMA 148
>gi|117618289|ref|YP_855049.1| sanA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559696|gb|ABK36644.1| sanA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 341
Score = 55.6 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 8/117 (6%)
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
I P+ RI LY + K I++SG + E L+++G+
Sbjct: 75 IGGSPNHYFKYRIKAAAELYNNGKVDY----ILVSGDNATVQ-YNEPRQMRRALIQAGIP 129
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
+ I + T + + + + +VS A+H +R+ +HFGI
Sbjct: 130 ANAIYSDYAGFRTLDSIVRAKEV---FGQAHFTVVSQAFHNERAIFIARHFGIEAVG 183
>gi|332364900|gb|EGJ42668.1| hypothetical protein HMPREF9389_0599 [Streptococcus sanguinis
SK355]
Length = 211
Score = 55.6 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGD-------PQKHGLAESIVYNNKLLESGVERDDIKLE 151
+ + Y+ II++GG P +G E+ V L+ G+ + IK E
Sbjct: 53 KAIEAYQKGYVR----RIIVTGGRSLTGTPHPDWNGHTEAEVIIQHLMAGGIPEEVIKFE 108
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILV 179
S +T +N F+ + + ++ +
Sbjct: 109 NSSSNTLENVLFAKEIFDFNTVETVMFI 136
>gi|288919623|ref|ZP_06413952.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
gi|288349021|gb|EFC83269.1| protein of unknown function DUF218 [Frankia sp. EUN1f]
Length = 195
Score = 55.6 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 64/171 (37%), Gaps = 18/171 (10%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
+ + +L+ +GWG + P +P+ G ++V+LG
Sbjct: 4 ARTRLVGACLLVVGVLGWGELEHWRASRRLLGTTAPAPAPR--GAGEVVVVLGFRNRSER 61
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
R R+ +R + ++++GG P AE+ + +
Sbjct: 62 INAVNRW--------RVRAGLR-----SLEGVESRLVLAGG-PVGGPRAEADLMADYARG 107
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ + +++ S T++N +I++ I +VS + H +R++ Y
Sbjct: 108 ARGYHGPLSVDSVSRSTWENIGNVIPLIEDA--DRIKVVSDSLHAERARAY 156
>gi|126726963|ref|ZP_01742801.1| hypothetical protein RB2150_17787 [Rhodobacterales bacterium
HTCC2150]
gi|126727083|ref|ZP_01742921.1| hypothetical protein RB2150_18387 [Rhodobacterales bacterium
HTCC2150]
gi|126703635|gb|EBA02730.1| hypothetical protein RB2150_17787 [Rhodobacterales bacterium
HTCC2150]
gi|126703755|gb|EBA02850.1| hypothetical protein RB2150_18387 [Rhodobacterales bacterium
HTCC2150]
Length = 220
Score = 55.6 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 52/124 (41%), Gaps = 13/124 (10%)
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK-----HGLAESIVY 134
P + + SY+ I + LY + + I+I+G P+ + E
Sbjct: 33 PQAVDLCVVLGAPSYTNIDPAISLYHANLVKN----IVITGFGPKGMRAADDFVPEYAGL 88
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN----MQGKNIILVSSAYHLKRSQL 190
++ L +GV + I LE + +T +N ++ +I+ +I + H++R+Q+
Sbjct: 89 LDRALRAGVPQSAILLEKTATNTLENFVETAKIIEAEFSWNAINSIAIAGKPLHMRRAQM 148
Query: 191 YFQH 194
+
Sbjct: 149 TARK 152
>gi|326405574|ref|YP_004285656.1| hypothetical protein ACMV_34270 [Acidiphilium multivorum AIU301]
gi|325052436|dbj|BAJ82774.1| hypothetical protein ACMV_34270 [Acidiphilium multivorum AIU301]
Length = 218
Score = 55.6 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 47/143 (32%), Gaps = 27/143 (18%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
IV+L G R+ + L + ++ISG
Sbjct: 58 PHAGGIVVLTGG------------------ADRVKAGLELLMA----GAAPRLLISG--- 92
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+G +++ + DI + + T NA+ +++ ++++V++ Y
Sbjct: 93 AGNGTYLGDFTARDGIDANAKATDITVGHAAATTRGNARETAAWASRHHIGSLVVVTADY 152
Query: 184 HLKRSQLYFQHF--GINTKASCS 204
H+ R+ L G+
Sbjct: 153 HMPRALLELHRALPGVTLIPEPV 175
>gi|153826664|ref|ZP_01979331.1| sanA protein [Vibrio cholerae MZO-2]
gi|149739526|gb|EDM53754.1| sanA protein [Vibrio cholerae MZO-2]
Length = 254
Score = 55.6 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 69/203 (33%), Gaps = 22/203 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ + HL R++ ++ + G I + Q + Q
Sbjct: 15 VFSALAHLRRLPWRRLSQTLLWLAIGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPFQ 71
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ V+LG I T+ +RI + LY+ K + ++SG +
Sbjct: 72 VAVVLGTSKYIGKTLNEYYT-------NRIDAAIALYQQGKVRN----FLLSGDNA-HRS 119
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E LL +G+ ++I L+ T + + + N ++++ +H +R
Sbjct: 120 YNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFD---TDNFLIITQRFHCER 176
Query: 188 SQLYFQHFGIN----TKASCSDY 206
+ ++ I S++
Sbjct: 177 ALFIARYQDIQASCLAVPGPSNH 199
>gi|145300590|ref|YP_001143431.1| SanA protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|142853362|gb|ABO91683.1| SanA protein [Aeromonas salmonicida subsp. salmonicida A449]
Length = 299
Score = 55.6 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K I++SG + E L+++G+ I +
Sbjct: 71 RIKAAAELYNNGKVDY----ILVSGDNATVQ-YNEPRQMRRALIQAGIPAKVIYSDYAGF 125
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + + +VS A+H +R+ +HFGI + +AY I
Sbjct: 126 RTLDSIVRAKEV---FGQAHFTVVSQAFHNERAIFIARHFGIEAVGFNAKDPSAYQGI 180
>gi|315022247|gb|EFT35275.1| SanA protein [Riemerella anatipestifer RA-YM]
gi|325336625|gb|ADZ12899.1| Uncharacterized membrane protein [Riemerella anatipestifer RA-GD]
Length = 203
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 37/228 (16%), Positives = 79/228 (34%), Gaps = 34/228 (14%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
LL I+ I ++ M+L + + + +Y + P + ++LG
Sbjct: 2 RLLKGIIKTILGLAELMVLAMMLANLWVYAL---TNGRTYTKVSKIPAREVA----LVLG 54
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
P + + P F R+ LY K II+SG + ++
Sbjct: 55 ----TSPKMRSGIANPYFT--KRMEAVSALYHYGKIK----KIIVSGEKSPYYDEPQA-- 102
Query: 134 YNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
N L+ G+ I + + T ++ N + +I++S +H R+
Sbjct: 103 MANYLIRTEGIPEGVIIQDPKGFSTKESIVRCK---NNYKKNEVIIISQGFHNLRALFIA 159
Query: 193 QHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL--IAYY 238
++ +N A + + S +E++ + +AY+
Sbjct: 160 RNLNMNALAFGAQDVTKPESFYRNHT---------REFLARVQAVAYF 198
>gi|300937981|ref|ZP_07152763.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300457022|gb|EFK20515.1| conserved hypothetical protein [Escherichia coli MS 21-1]
Length = 230
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 23/188 (12%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R+ + C +LL + I ++ + ++ ++ +LLG
Sbjct: 16 RRTLKIGCLLLLIAG-ATLFIADRVMVNASQQLTWSDVNAVPARNVG--LLLGA------ 66
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P R RI LY + K +++SG + +K+ E+ L+
Sbjct: 67 -RPGNRY-----FTRRIDSAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIA 115
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
GV I + T + ++ + +I ++S +H +R+ + +GI+
Sbjct: 116 KGVPAKVIFCDYAGFSTLDSVVRANKVFSEN---HITIISQEFHNQRAIWLAKQYGIDAI 172
Query: 201 ASCSDYLN 208
+ LN
Sbjct: 173 GFNAPDLN 180
>gi|59712167|ref|YP_204943.1| SanA protein [Vibrio fischeri ES114]
gi|59480268|gb|AAW86055.1| SanA protein [Vibrio fischeri ES114]
Length = 225
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 68/196 (34%), Gaps = 21/196 (10%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K + +++ + + P + + L Q + +VL GT+
Sbjct: 10 KKWIKIVLIVVIAATSAILTPDVYM-SLSTQSQLYKQVEALPEQETALVL---GTSKY-- 63
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
IR + RI + L+K K ++SG + E LL++
Sbjct: 64 ---IRRTLNPYYQYRIDAAIELFKQNKVSH----FLLSGDNA-HRSYNEPWTMKRDLLKA 115
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN--- 198
G+ D I L+ T + Q + + ++ +VS +H +R+ HF ++
Sbjct: 116 GIPEDRITLDYAGFRTLDSVQRAKEIFDAN---SLTIVSQQFHCQRAVFIANHFDMDTVC 172
Query: 199 -TKASCSDYLNAYYSI 213
S S + N
Sbjct: 173 LVVPSPSGWANTKIRF 188
>gi|225548067|ref|ZP_03769352.1| hypothetical protein RUMHYD_00046 [Blautia hydrogenotrophica DSM
10507]
gi|225040743|gb|EEG50989.1| hypothetical protein RUMHYD_00046 [Blautia hydrogenotrophica DSM
10507]
Length = 196
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 19/150 (12%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSY----SRIFETMRLYKSCKQHSMHCTIIISGG 121
+II + GNG + A + F Y + + S
Sbjct: 22 ADIIFVPGNGYPQMAERAAKLWKAGFAPYVLPSGKYSTAFGEFSGVLDKKEEYQGTFS-- 79
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILV 179
E L+++GV I E Q+ T QNA++S + ++ K +L
Sbjct: 80 -------TEWEFLREVLVKNGVPDYAILREDQATYTEQNARYSRRVTEHAGITVKRAMLC 132
Query: 180 SSAYHLKRSQLYFQHFG----INTKASCSD 205
YH +R+ LY+Q + + SC D
Sbjct: 133 CKNYHARRAYLYYQQYFPNTVFHVLPSCVD 162
>gi|54309183|ref|YP_130203.1| putative SanA protein [Photobacterium profundum SS9]
gi|46913615|emb|CAG20401.1| Putative SanA protein [Photobacterium profundum SS9]
Length = 233
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 72/208 (34%), Gaps = 34/208 (16%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII------VLLGNGTTIIPTIPAI 85
LF+ + ++ T L L + S + D + I ++LG I T+
Sbjct: 9 LFAVLCIILVSTSL---LIDRWVSASTSDRIFYDVSHIPSRSIGLVLGTSKYIAKTLNPY 65
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R+ + LYK K + ++SG + E LL+SG+
Sbjct: 66 YSY-------RMEAALELYKQGKIN----VFLLSGDNA-HRSYNEPWTMKRDLLKSGIPD 113
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
DI L+ T + + + + + ++++ +H +R+ + I+
Sbjct: 114 SDIVLDYAGFRTLDSVVRAKEVFEA---DHFVIITQKFHCERALFIAESNNIDAICLAV- 169
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGI 233
P F ++ L+E +
Sbjct: 170 ---------PEPRGFAGFKIRLREVLAR 188
>gi|157145697|ref|YP_001453017.1| hypothetical protein CKO_01446 [Citrobacter koseri ATCC BAA-895]
gi|157082902|gb|ABV12580.1| hypothetical protein CKO_01446 [Citrobacter koseri ATCC BAA-895]
Length = 266
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 18/155 (11%)
Query: 49 LQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI------RIEPSFQSYSRIFETMR 102
L + S + +VL G +IP I A + P S T
Sbjct: 20 LGHWLAQNDFSGDAPYQADCVVL--AGNAVIPAIDAACNIAKAQQIPLLISGGIGHSTTF 77
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNA 161
LY + H + TI +G E+ + + + + ++I E +S + +NA
Sbjct: 78 LYAAIAGHPRYNTIRTTG-------RTEAKILADIAHQFWQIPTENICPEDKSTNCGENA 130
Query: 162 QFSSSMIKN--MQGKNIILVSSAYHLKRSQLYFQH 194
QFS ++I I+V +R+ F+
Sbjct: 131 QFSCALIGQVSAPINTAIIVQDPTMQRRTMATFRR 165
>gi|229515567|ref|ZP_04405026.1| SanA protein [Vibrio cholerae TMA 21]
gi|229347336|gb|EEO12296.1| SanA protein [Vibrio cholerae TMA 21]
Length = 254
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 68/203 (33%), Gaps = 22/203 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ + HL R++ ++ + G I + Q + Q
Sbjct: 15 VFSALAHLRRLPWRRLSQTLLWLAIGVGTGLLAIDRWVTWQTQN---NIINDAQNTPPFQ 71
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ V+LG I T+ +RI + LY+ K + ++SG +
Sbjct: 72 VAVVLGTSKYIGKTLNEYYT-------NRINAAIALYQQGKVRN----FLLSGDNA-HRS 119
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E LL +G+ ++I L+ T + + + N ++++ +H +R
Sbjct: 120 YNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFD---TDNFLIITQRFHCER 176
Query: 188 SQLYFQHFGIN----TKASCSDY 206
+ ++ I S +
Sbjct: 177 ALFIARYQDIQASCLAVPGPSSH 199
>gi|325686338|gb|EGD28368.1| hypothetical protein HMPREF9381_2259 [Streptococcus sanguinis SK72]
Length = 211
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 11/88 (12%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGD-------PQKHGLAESIVYNNKLLESGVERDDIKLE 151
+ + Y+ II++GG P +G E+ V LL +G+ IK E
Sbjct: 53 KAIEAYQKGYVR----RIIVTGGRSLTGMPHPDWNGHTEAEVIIQHLLAAGIPEKAIKSE 108
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILV 179
+ S +T +N F+ + ++++ +
Sbjct: 109 SSSSNTLENVLFAKEIFDFNTVESVMFI 136
>gi|323173666|gb|EFZ59295.1| hypothetical protein ECLT68_1983 [Escherichia coli LT-68]
Length = 230
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 72/209 (34%), Gaps = 25/209 (11%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILL-KHLQFSYQRPLLSPQWKK 64
+ + + L R+ ++C +LL + I +++ Q ++ P
Sbjct: 1 MLRAFARFLLRICFSRRTLKIACLLLLVAGATIFIADRVMVNASKQLTWSDVNAVPARNV 60
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+LLG P R RI LY + K +++SG + +
Sbjct: 61 G----LLLGA-------RPGNRY-----FTRRIDTAAALYHAGKVKW----LLVSGDNGR 100
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
K+ E+ L+ GV I + T + + + +I ++S +H
Sbjct: 101 KN-YDEASGMQKALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGEN---HITIISQEFH 156
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSI 213
+R+ + + I+ + LN +
Sbjct: 157 NQRAIWLAKQYSIDAIGFNAPDLNMKHGF 185
>gi|197334804|ref|YP_002156375.1| SanA protein [Vibrio fischeri MJ11]
gi|197316294|gb|ACH65741.1| SanA protein [Vibrio fischeri MJ11]
Length = 209
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 46/122 (37%), Gaps = 12/122 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + L+K K ++SG + E LL++G+ D I L+
Sbjct: 59 RIDAAIELFKQNKVSH----FLLSGDNA-HRSYNEPWTMKRDLLKAGIPEDRITLDYAGF 113
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN----TKASCSDYLNAYY 211
T + Q + + ++ +VS +H +R+ HF ++ S S + N
Sbjct: 114 RTLDSVQRAKEIFDAN---SLTIVSQQFHCQRAVFIANHFDMDTVCLVVPSPSGWANTKI 170
Query: 212 SI 213
Sbjct: 171 RF 172
>gi|332752765|gb|EGJ83150.1| hypothetical protein SFK671_3724 [Shigella flexneri K-671]
gi|332765079|gb|EGJ95306.1| hypothetical protein SF293071_3656 [Shigella flexneri 2930-71]
Length = 203
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ GV I +
Sbjct: 49 RIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKGVPAKVIFCDYAGF 103
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + +I ++S +H +R+ + +GI+ + LN +
Sbjct: 104 STLDSVVRAKKVFGEN---HITIISQEFHNQRTIWLAKQYGIDAIGFNAPDLNMKHGF 158
>gi|212712140|ref|ZP_03320268.1| hypothetical protein PROVALCAL_03222 [Providencia alcalifaciens DSM
30120]
gi|212685187|gb|EEB44715.1| hypothetical protein PROVALCAL_03222 [Providencia alcalifaciens DSM
30120]
Length = 234
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 61/178 (34%), Gaps = 16/178 (8%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+L+ + I + + + S + ++ ++LG +
Sbjct: 9 LLILAGIAFATVILLDRWISWESAPYIYEDVEQLPARDVGMVLGTSRYYASGATNLYYT- 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
RI Y S K +++SG + H E I L+++GV I
Sbjct: 68 -----YRIKGAADAYHSGKVKY----LLLSGDNGA-HNYNEPIAMRKDLIKAGVPASKIV 117
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK--ASCSD 205
L+ T + + + N +++ +H +R+ +H GI+ + A +
Sbjct: 118 LDFAGFRTLDSVVRTKKVFD---TDNFTIITQRFHCERALFIAKHKGIDAQCLAVPTP 172
>gi|323492448|ref|ZP_08097596.1| SanA protein [Vibrio brasiliensis LMG 20546]
gi|323313235|gb|EGA66351.1| SanA protein [Vibrio brasiliensis LMG 20546]
Length = 264
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 64/178 (35%), Gaps = 24/178 (13%)
Query: 32 LFSFIGWGIIPTILL--------KHLQFSYQRPLLS-PQWKKDGNIIVLLGNGTTIIPTI 82
+ I W + I L + + + + + + P+ + ++ V+LG T
Sbjct: 18 ILKLIAWLPVVFIALSASLFVVDRWISYQARHQVFTQPEQIEQFDVAVVLG-------TS 70
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
+ + +RI + LY+ K ++SG + E LL +G
Sbjct: 71 KYLGKILNEYYTNRIDAAIELYEQGKVSH----FLLSGDNA-HRSYNEPWTMKRDLLRAG 125
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+ D I L+ T + + + N +++S +H +R+ I+ K
Sbjct: 126 IPEDRIFLDYAGFRTLDSVVRAKEIFD---TDNFLIISQKFHCERALFIANSHDIDAK 180
>gi|172037429|ref|YP_001803930.1| hypothetical protein cce_2516 [Cyanothece sp. ATCC 51142]
gi|171698883|gb|ACB51864.1| DUF218-containing protein [Cyanothece sp. ATCC 51142]
Length = 197
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 54/181 (29%), Gaps = 46/181 (25%)
Query: 32 LFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
LF + + L K LQ + +P I +LG
Sbjct: 24 LFPLLCLATLGLWLGYKQLQAYFVQP----------EAIFVLGGHEDRE----------- 62
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R I +S G PQ + +GV D + L
Sbjct: 63 -----------RFAAKLALEHPDLPIWVSSGSPQNYVT-------KIFTSAGVSGDRLHL 104
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY----FQHFGI--NTKASCS 204
+ Q+ DT N K ++ L++S H+ R+++ F GI + S
Sbjct: 105 DYQAKDTVTNFTTLVKEFKAQGIDSVYLITSDNHMNRARIIGEIVFGTQGITLKPLSVPS 164
Query: 205 D 205
D
Sbjct: 165 D 165
>gi|218779182|ref|YP_002430500.1| hypothetical protein Dalk_1331 [Desulfatibacillum alkenivorans
AK-01]
gi|218760566|gb|ACL03032.1| protein of unknown function DUF218 [Desulfatibacillum alkenivorans
AK-01]
Length = 178
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
LE ++ TF+NA +IK N+ILV+ +H+ RS +
Sbjct: 50 VLEPKARTTFENALLCGEIIKREGWNNVILVTHEHHMPRSYFLLR 94
>gi|296115663|ref|ZP_06834289.1| hypothetical protein GXY_07730 [Gluconacetobacter hansenii ATCC
23769]
gi|295977640|gb|EFG84392.1| hypothetical protein GXY_07730 [Gluconacetobacter hansenii ATCC
23769]
Length = 309
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 21/151 (13%)
Query: 44 ILLKHLQFSYQRPLLSPQW-KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
+L + L + W I++ G G A + S R+ +
Sbjct: 120 MLWQTLNAPALHLAQNLDWRHYPYTAIIVPGAG------PEAQGVSLSAMGKLRLMLAVD 173
Query: 103 LYKSCKQHSMHCTIIISGGD--PQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQ 159
++ I++SGG P + E+ +L+ G+ +I +E + T
Sbjct: 174 AFR----KKQAPFILVSGGAVHPAQTHYVEAQEMRRELISRFGIAERNIIIEPYARHTTT 229
Query: 160 NAQFSSSMIKNMQGKN---IILVS----SAY 183
N + +S ++ M ++V+ SAY
Sbjct: 230 NLRNASRLLATMNAPRQQPALIVTDQDQSAY 260
>gi|218187877|gb|EEC70304.1| hypothetical protein OsI_01148 [Oryza sativa Indica Group]
Length = 247
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 66/199 (33%), Gaps = 20/199 (10%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ K +S F+++ +G I + Y L + V+LG
Sbjct: 1 MWKRLIISLFIIIAVLMGSAIALDRWISWKTAPYVYDELQELPHRQVG--VVLGTAKYYR 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K +++SG + Q E + L+
Sbjct: 59 TGVINQYYR------YRIQGAINAYNSGKVKY----LLLSGDNAQ-QSYNEPMTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+GV DI L+ T + + + + I+++ +H +R+ H GI
Sbjct: 108 AAGVAPSDIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQA 164
Query: 200 K----ASCSDYLNAYYSII 214
+ S D + I
Sbjct: 165 QCYAVPSPKDMMTVRAREI 183
>gi|84390406|ref|ZP_00991417.1| hypothetical protein V12B01_11565 [Vibrio splendidus 12B01]
gi|84376666|gb|EAP93542.1| hypothetical protein V12B01_11565 [Vibrio splendidus 12B01]
Length = 292
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 22/132 (16%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT--IIISGGDPQKHG 127
++LG + + + SR+ + + GG +
Sbjct: 8 IVLG--------KRLNGNKLTDEGISRVDALVEYLAGPLAEESIQKTAVAFCGGMTKGQT 59
Query: 128 LAESIVYNNKLLESGVERD------DIKLETQSLDTFQNAQF-SSSMIKNMQGKN----- 175
+E+ + +R+ I LE S +T +N Q +S MI++
Sbjct: 60 TSEADAMHQYFRILESQREYPFSLGAILLEQNSTNTVENIQNLASEMIESGLFTRGQSVT 119
Query: 176 IILVSSAYHLKR 187
+ VS+ YHL+R
Sbjct: 120 VTFVSNDYHLQR 131
>gi|325499862|gb|EGC97721.1| hypothetical protein ECD227_3959 [Escherichia fergusonii ECD227]
Length = 203
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ GV I +
Sbjct: 49 RIDTAAELYHAGKVKW----LLVSGDNGRKN-YDETSGMQQALIAKGVPAKVIFCDYAGF 103
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
T + + + +I ++S +H +R+ + +GI+ + LN
Sbjct: 104 STLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLN 153
>gi|328884053|emb|CCA57292.1| hypothetical protein SVEN_4006 [Streptomyces venezuelae ATCC 10712]
Length = 127
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 100 TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
+ LYK + T S ++ E++ Y + +E GV + +E ++ +T +
Sbjct: 43 AVDLYKRGMAPLLVFTGATSPTTRERMPRGEAVHYKERAIELGVPASAVMVEPRARNTGE 102
Query: 160 NAQFSSSMIKNMQGKNIILVSS 181
N +FS ++ + V+S
Sbjct: 103 NIRFSQDLLTDAGIA----VTS 120
>gi|171915828|ref|ZP_02931298.1| hypothetical protein VspiD_31695 [Verrucomicrobium spinosum DSM
4136]
Length = 260
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 70/185 (37%), Gaps = 22/185 (11%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG 73
+ + + ++ +S LL +GI+ L H Q + ++ ++LG
Sbjct: 37 AFIRRWLARLMILSVHALLIVGGCYGIV--WALSHKQVYRSVDDIPVRYVG-----LVLG 89
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+ P A +R+ +L ++ K +++SG D + G E
Sbjct: 90 CVKKVGPHDNA-------FFNARVDAAAKLLEAGKVQF----LLVSG-DNNRDGQNEPQD 137
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ L+ G+ D I + T + + + +++ ++S +H +R+ +
Sbjct: 138 MKDALIAKGIPADRIYCDYSGFRTLDSVVRARQI---FGQRDMTIISQNFHNERALYMAR 194
Query: 194 HFGIN 198
FG+
Sbjct: 195 RFGLP 199
>gi|171910674|ref|ZP_02926144.1| hypothetical protein VspiD_05860 [Verrucomicrobium spinosum DSM
4136]
Length = 211
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 75/221 (33%), Gaps = 37/221 (16%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
L + ++ + + + + W I LL+ ++ + P K + IV+LG
Sbjct: 4 FLARLAFRLVKLILVVAVLLGVAW-IFRESLLRTAARTWV--VDDPVLK--ADAIVVLGG 58
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG------- 127
G P F +Y + + ++++ P+K
Sbjct: 59 GRDWRP-----------------FTAADMYLAGQST----VVLVT--QPEKSPSQNLLQQ 95
Query: 128 LAESIVYNNKLLESGVERDDIKLETQS-LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+E+ + L + GV I+ Q+ T A + Q K+I++ + +H +
Sbjct: 96 PSEAEINTTVLTKKGVPSTAIRPLGQNVTSTRDEALALRDWVIAHQAKDILIPTDPFHTR 155
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
R++ FQ + + + + + + +
Sbjct: 156 RARWIFQRA-LEGTGATVHVRAIPHPRYSETDWWRHEDGFI 195
>gi|121728223|ref|ZP_01681256.1| sanA protein [Vibrio cholerae V52]
gi|262169490|ref|ZP_06037182.1| SanA protein [Vibrio cholerae RC27]
gi|121629474|gb|EAX61900.1| sanA protein [Vibrio cholerae V52]
gi|227013103|gb|ACP09313.1| sanA protein [Vibrio cholerae O395]
gi|262022303|gb|EEY41012.1| SanA protein [Vibrio cholerae RC27]
Length = 254
Score = 54.9 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 68/203 (33%), Gaps = 22/203 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ + HL RK+ ++ + G I + Q + Q
Sbjct: 15 VFSALAHLRRLPWRKLSQTLLWLTIGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPFQ 71
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ V+LG I T+ +RI + LY+ K + ++SG +
Sbjct: 72 VAVVLGTSKYIGKTLNEYYT-------NRIDAAIALYQQGKVRN----FLLSGDNA-HRS 119
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E LL +G+ ++I L+ T + + + N ++++ +H +R
Sbjct: 120 YNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFD---TDNFLIITQRFHCER 176
Query: 188 SQLYFQHFGIN----TKASCSDY 206
+ ++ I S +
Sbjct: 177 ALFIARYQDIQASCLAVPGPSSH 199
>gi|330994303|ref|ZP_08318231.1| hypothetical protein SXCC_04196 [Gluconacetobacter sp. SXCC-1]
gi|329758770|gb|EGG75286.1| hypothetical protein SXCC_04196 [Gluconacetobacter sp. SXCC-1]
Length = 171
Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 45/115 (39%), Gaps = 1/115 (0%)
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
++ P + + + + + + +GG GL E+ V LL++G
Sbjct: 8 GAKLRPDGTAARTLRCRVEAAHAFGRQHGAVVYMPTGGPSWPSGLTEASVMARLLLDAGA 67
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHFGI 197
+ +E + DT + + +++ + + SSAYHL R + + G
Sbjct: 68 APGSVLVEDTAPDTLASVIACTRLLRATGHAGPVAVASSAYHLPRCLVLMRMMGW 122
>gi|260772666|ref|ZP_05881582.1| hypothetical protein VIB_001117 [Vibrio metschnikovii CIP 69.14]
gi|260611805|gb|EEX37008.1| hypothetical protein VIB_001117 [Vibrio metschnikovii CIP 69.14]
Length = 209
Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 57/161 (35%), Gaps = 28/161 (17%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+ L +HL+ +Q + + K ++IV+ G+ + +
Sbjct: 1 MSKRLYQHLETLWQFMQMGHELKP-ADVIVVPGSNDIRVAEV-----------------A 42
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHG----LAESIVYNNKLLESGVERDDIKLETQSLD 156
LY+ + ++ SG + +E+ + E G+ I LE ++
Sbjct: 43 ADLYQ----RGLAPWVLFSGDKGRFTEDLFEYSEAETFAMVAKECGLPSSAILLEPRATH 98
Query: 157 TFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHF 195
+ +N S ++ + +++V Y +R+ F
Sbjct: 99 SGENVCLSHQLLSEKGIQVQRLLIVHKPYMERRAFATFTKQ 139
>gi|255036407|ref|YP_003087028.1| hypothetical protein Dfer_2646 [Dyadobacter fermentans DSM 18053]
gi|254949163|gb|ACT93863.1| protein of unknown function DUF218 [Dyadobacter fermentans DSM
18053]
Length = 201
Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 24/180 (13%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
Q S + ++ ++LG + + + + R+ T RL+K K
Sbjct: 17 QYSYFSIESLPPNDVALVLG------TSKKSEKGTENLFFKYRMEATARLFKEGKIKY-- 68
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
II+SG + E + LL G+ + + L+ TF + +
Sbjct: 69 --IILSGNN-DSQYYNEPLDMQRALLNLGIPENVMTLDYAGFRTFDSIVRCKQVFNQ--- 122
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
N ++S +H R+ + GIN + + + YS ++EY+
Sbjct: 123 DNFTVISQNFHNARALYIAHNEGINAISFAAQDVPDGYSF----------RTLVREYLAR 172
>gi|258622659|ref|ZP_05717679.1| hypothetical protein VMD_27250 [Vibrio mimicus VM573]
gi|258585036|gb|EEW09765.1| hypothetical protein VMD_27250 [Vibrio mimicus VM573]
Length = 294
Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 14/94 (14%)
Query: 107 CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD-------DIKLETQSLDTFQ 159
+ I+ GG ++E+ + + V++ D+ LE QS T +
Sbjct: 43 QCHENSSALIVFCGGVTAGQTVSEAQRMHEYF-QQQVQQKGLVLQHVDVLLEQQSTSTVE 101
Query: 160 NAQFSSSM------IKNMQGKNIILVSSAYHLKR 187
N + + + + + + LVSS YHLKR
Sbjct: 102 NIEHLAHVLLASQRLHAGETLTLTLVSSDYHLKR 135
>gi|88807093|ref|ZP_01122605.1| hypothetical protein WH7805_11118 [Synechococcus sp. WH 7805]
gi|88788307|gb|EAR19462.1| hypothetical protein WH7805_11118 [Synechococcus sp. WH 7805]
Length = 195
Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 72/181 (39%), Gaps = 42/181 (23%)
Query: 36 IGWGIIPTILLKHL--QFSYQRPL----LSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+G+GI P +L+ L ++ PL ++ ++D I++LG
Sbjct: 1 MGFGIRPFLLISSLVAGAAFATPLRPFAVAALTRQDPQKILVLGG--------------- 45
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG-VERDDI 148
R +RL + + +++SGG + Y L+E + ++++
Sbjct: 46 ---DADRERIGLRLARQ-----LELPLVVSGGTNPE--------YAQWLMEHEGLGQNEV 89
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL----YFQHFGINTKASCS 204
+L+ ++ DT N ++ + ++++LV+S HL R+ + GI
Sbjct: 90 RLDYRAQDTLGNFTSLVDELQGEEIEHVLLVTSEDHLPRALMVGGIVAGSRGIRLTGVPV 149
Query: 205 D 205
Sbjct: 150 S 150
>gi|313205935|ref|YP_004045112.1| hypothetical protein Riean_0437 [Riemerella anatipestifer DSM
15868]
gi|312445251|gb|ADQ81606.1| protein of unknown function DUF218 [Riemerella anatipestifer DSM
15868]
Length = 190
Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 51/144 (35%), Gaps = 17/144 (11%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLD 156
+ M + + II+SG + ++ N L+ G+ I + +
Sbjct: 56 TKRMEAVSALYHYGKIKKIIVSGEKSPYYDEPQA--MANYLIRTEGIPEGVIIQDPKGFS 113
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
T ++ N + +I++S +H R+ ++ +N A + + S
Sbjct: 114 TKESIVRCK---NNYKKNEVIIISQGFHNLRALFIARNLNMNALAFGAQDVTKPESFYRN 170
Query: 217 SANFYLTELALKEYIGIL--IAYY 238
+E++ + +AY+
Sbjct: 171 HT---------REFLARVQAVAYF 185
>gi|153829633|ref|ZP_01982300.1| sanA protein [Vibrio cholerae 623-39]
gi|148874909|gb|EDL73044.1| sanA protein [Vibrio cholerae 623-39]
Length = 254
Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 68/203 (33%), Gaps = 22/203 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ + HL R++ ++ + G I + Q + Q
Sbjct: 15 VFSALAHLRRLPWRRLSQTLLWLAIGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPFQ 71
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ V+LG I T+ +RI + LY+ K + ++SG +
Sbjct: 72 VAVVLGTSKYIGKTLNEYYT-------NRIDAAIALYQQGKVRN----FLLSGDNA-HRS 119
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E LL +G+ ++I L+ T + + + N ++++ +H +R
Sbjct: 120 YNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFD---TDNFLIITQRFHCER 176
Query: 188 SQLYFQHFGIN----TKASCSDY 206
+ ++ I S +
Sbjct: 177 ALFIARYQDIQASCLAVPGPSSH 199
>gi|253568622|ref|ZP_04846033.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251842695|gb|EES70775.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 214
Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + LYK+ K + I+ISG D +K E L++ GV I L+
Sbjct: 69 RIDAAVELYKAGKINY----ILISG-DNRKEDYNEPEEMKKALMQKGVPEKSIYLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + + ++S +H +R+ + GI + ++ Y +
Sbjct: 124 RTLDSVVRAKEV---FGQTRLTIISQRFHNERAIYLAEKNGITAIGFNARDVDVYAGL 178
>gi|317968099|ref|ZP_07969489.1| hypothetical protein SCB02_01051 [Synechococcus sp. CB0205]
Length = 213
Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 55/134 (41%), Gaps = 23/134 (17%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
+++SGG + Y + L G++ + L+ ++ DT N +K
Sbjct: 76 GLPVMVSGGSNPE--------YAHWLFRGRGLDDTRVLLDYRATDTLSNFTSVVDDLKRS 127
Query: 172 QGKNIILVSSAYHLKRSQLY------FQHFGINTKASCS-------DYLNAYYSIIPLSA 218
+ ++++LV+S+ H+ R+ + + G+ A D+ + + +A
Sbjct: 128 KIRHVVLVTSSDHMDRALMVGRVVAGSRGIGLTPLAVPCGERCVPEDWRKVWGDGL-RAA 186
Query: 219 NFYLTELALKEYIG 232
+ ++ L+++
Sbjct: 187 LWVVSGRDLRDWAA 200
>gi|299138111|ref|ZP_07031291.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
gi|298600041|gb|EFI56199.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
Length = 417
Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 16/125 (12%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
K ++IV+ G G P P + + + R Y + K I++SGG
Sbjct: 248 KYPYSVIVVPGEG----PEDPNVSL--AEIGRKRTALAAEAYHAGKAPF----ILVSGGY 297
Query: 122 -DPQKHGLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNI 176
P + +E+I LL V + I ++ + T N + ++ I K
Sbjct: 298 VHPSQTRFSEAIEMKKALLSDYHVPEEAILVDPHARHTTTNMRNAAREIYRYNIPIDKQA 357
Query: 177 ILVSS 181
++VS
Sbjct: 358 LVVSD 362
>gi|298492064|ref|YP_003722241.1| hypothetical protein Aazo_3502 ['Nostoc azollae' 0708]
gi|298233982|gb|ADI65118.1| protein of unknown function DUF218 ['Nostoc azollae' 0708]
Length = 176
Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 57/151 (37%), Gaps = 32/151 (21%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
I +L+ Q LL PQ +++LG T R
Sbjct: 1 MSFILPLLVWWGYKEVQNQLLHPQ------AVLVLGGST-------------------RR 35
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E + + + I ISGG P ++ +SGV+ + L+ +++DT
Sbjct: 36 LEREKFTANFANKHPNIPIWISGGSPPRYT-------KEVFTKSGVDPRRLHLDYEAVDT 88
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
N ++ K++ L++S +H++R+
Sbjct: 89 LTNFTTLVDDLQARGIKSVYLITSDFHMRRA 119
>gi|229525796|ref|ZP_04415201.1| SanA protein [Vibrio cholerae bv. albensis VL426]
gi|229339377|gb|EEO04394.1| SanA protein [Vibrio cholerae bv. albensis VL426]
Length = 254
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 68/203 (33%), Gaps = 22/203 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ + HL R++ ++ + G I + Q + Q
Sbjct: 15 VFSALAHLRRLPWRRLSQTLLWLAIGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPFQ 71
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ V+LG I T+ +RI + LY+ K + ++SG +
Sbjct: 72 VAVVLGTSKYIGKTLNEYYT-------NRIDAAIALYQQGKVRN----FLLSGDNA-HRS 119
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E LL +G+ ++I L+ T + + + N ++++ +H +R
Sbjct: 120 YNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFD---TDNFLIITQRFHCER 176
Query: 188 SQLYFQHFGIN----TKASCSDY 206
+ ++ I S +
Sbjct: 177 ALFIARYQDIQASCLAVPGPSSH 199
>gi|317403935|gb|EFV84404.1| hypothetical protein HMPREF0005_03307 [Achromobacter xylosoxidans
C54]
Length = 98
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 10/106 (9%)
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ L+ GV D + + D++ A+ +S+ ++ + +++ +H+ R+ L +
Sbjct: 1 MRDYLIARGVPADRVVADRLGNDSWATARHASAYMRERGYASATVITQYFHVPRTMLALR 60
Query: 194 HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
G+ S P A L+E I R
Sbjct: 61 RHGVPQVGGAS----------PRYAEARDLYSILRELPAIAWYALR 96
>gi|56551314|ref|YP_162153.1| hypothetical protein ZMO0418 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241760967|ref|ZP_04759056.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753066|ref|YP_003225959.1| hypothetical protein Za10_0828 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56542888|gb|AAV89042.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374586|gb|EER64047.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552429|gb|ACV75375.1| protein of unknown function DUF218 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 203
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 64/164 (39%), Gaps = 33/164 (20%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+L I + I +L + + P K+ + IV+L G
Sbjct: 5 AILLGSIRFLICLFMLWLGGFWLFYSFHAHPTNKQVTDGIVVLTGG-------------- 50
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN----NKLLESGVER 145
RI + + + + M ++SG + AE + + L+E V+
Sbjct: 51 ----AGRIDRGLMMLERHQAKKM----LVSG--VNRQVKAEELAALYDIPSHLIECCVD- 99
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
L TQ++DT NAQ ++ I ++ L+++ +H+ R++
Sbjct: 100 ----LGTQAVDTSSNAQETAEWITLNHYHSVRLITTDWHMARAR 139
>gi|148555918|ref|YP_001263500.1| hypothetical protein Swit_3011 [Sphingomonas wittichii RW1]
gi|148501108|gb|ABQ69362.1| protein of unknown function DUF218 [Sphingomonas wittichii RW1]
Length = 177
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 60/164 (36%), Gaps = 40/164 (24%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
G+ L P +P I+V+ G
Sbjct: 13 WIAGFMAFALFL----------PQPAPDGIATDGIVVMTGG------------------- 43
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGD--PQKHGLAESIVYNNKLLESGVERDDIKLE 151
R+ +RL ++ + ++ISG D + H LA L+E V+
Sbjct: 44 RGRVERGLRLLEAKRAK----RLLISGADRRVRPHELAAQFKAPMALVECCVDLGH---- 95
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
+S+DT NA ++ I + ++I LV+S +H+ R++ ++
Sbjct: 96 -ESVDTRSNAAEAADWIARRRYRSIRLVTSDWHMVRARFDLRNA 138
>gi|302529491|ref|ZP_07281833.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302438386|gb|EFL10202.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length = 197
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 50/136 (36%), Gaps = 17/136 (12%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P G +V+LG R R+ +R Q +++
Sbjct: 40 PGTSGTGEAVVVLGYRNGGSRANFVNRW--------RVRAAVR-----SQAPDRSRLVLC 86
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG E+ + G R + LET+S T++N + +I++ I +V
Sbjct: 87 GGAVGG-PEPEASLMARYARAHGY-RGPLVLETESRSTWENVLHAVPLIEDA--DRIKIV 142
Query: 180 SSAYHLKRSQLYFQHF 195
S + H ++++ Y +
Sbjct: 143 SDSLHAEKARHYLRRL 158
>gi|29345977|ref|NP_809480.1| hypothetical protein BT_0567 [Bacteroides thetaiotaomicron
VPI-5482]
gi|298387372|ref|ZP_06996925.1| protein SanA [Bacteroides sp. 1_1_14]
gi|29337871|gb|AAO75674.1| putative protein involved in barrier function of the cell envelope
[Bacteroides thetaiotaomicron VPI-5482]
gi|298260041|gb|EFI02912.1| protein SanA [Bacteroides sp. 1_1_14]
Length = 214
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + LYK+ K + I+ISG D +K E L++ GV I L+
Sbjct: 69 RIDAAVELYKAGKINY----ILISG-DNRKEDYNEPEEMKKALMQKGVPEKSIYLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + + ++S +H +R+ + GI + ++ Y +
Sbjct: 124 RTLDSVVRAKEV---FGQTRLTIISQRFHNERAIYLAEKNGITAIGFNARDVDVYAGL 178
>gi|148271437|ref|YP_001220998.1| hypothetical protein CMM_0258 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147829367|emb|CAN00280.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 197
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 14/136 (10%)
Query: 60 PQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
P + IV+LG G P + +R L +S + T+I+
Sbjct: 38 PGTEVGREAIVVLGYGNRG----------PRANAINRYRVRAGL-RSMDPRATSSTLILC 86
Query: 120 GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
GG E+ + + R + LE S T +N + +++ I +V
Sbjct: 87 GGSVMGT-EPEARILARYARDELGYRGPLVLEDTSTSTRENIANAIPFLEDA--DTIRIV 143
Query: 180 SSAYHLKRSQLYFQHF 195
S + H +++ Y +
Sbjct: 144 SDSVHAAKARPYLREL 159
>gi|326424076|ref|NP_761614.2| SanA protein [Vibrio vulnificus CMCP6]
gi|319999454|gb|AAO11141.2| SanA protein [Vibrio vulnificus CMCP6]
Length = 245
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 22/187 (11%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W L + I +LF I + + SY + ++ V+L
Sbjct: 11 WISLKRLIGGSLVAILCAILFVIIVDRWVSLQASDKIITSY-------DQVEGFDVAVVL 63
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G I T+ RI + LY+ K +++SG + E
Sbjct: 64 GTSKYIGRTLNTYYTH-------RIDAAIELYRQNKVQH----LLLSGDNA-HRSYNEPW 111
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
LL++GV +I L+ T + + + + + ++V+ +H +R+
Sbjct: 112 TMKRDLLKAGVPETNIHLDYAGFRTLDSIVRAKKIFAS---DHFLIVTQRFHCERALFIA 168
Query: 193 QHFGINT 199
+ IN
Sbjct: 169 NAYQINA 175
>gi|312886432|ref|ZP_07746041.1| protein of unknown function DUF218 [Mucilaginibacter paludis DSM
18603]
gi|311301060|gb|EFQ78120.1| protein of unknown function DUF218 [Mucilaginibacter paludis DSM
18603]
Length = 416
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 16/119 (13%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD--PQKH 126
IV+ GNG P I I P + + Y II+SGG P +
Sbjct: 253 IVIPGNG----PEITTTPISPDNKIH--CDVAAERYLKGWAPF----IIVSGGYCYPFQG 302
Query: 127 GLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSS 181
E++ L++ + D I ++ + T N + ++ +I K + ++S
Sbjct: 303 PYCEAVQMKKYLMQKFEIPEDAIIIDPHARHTTTNFRNANRLIIRYGIHVDKPSVFITS 361
>gi|37679647|ref|NP_934256.1| SanA protein [Vibrio vulnificus YJ016]
gi|37198391|dbj|BAC94227.1| SanA protein [Vibrio vulnificus YJ016]
Length = 245
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 22/187 (11%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W L + I +LF I + + SY + ++ V+L
Sbjct: 11 WISLKRLIGGSLVAILCAILFVIIVDRWVSLQASDKIITSY-------DQVEGFDVAVVL 63
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G I T+ RI + LY+ K +++SG + E
Sbjct: 64 GTSKYIGRTLNTYYTH-------RIDAAIELYRQNKVQH----LLLSGDNA-HRSYNEPW 111
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
LL++GV +I L+ T + + + + + ++V+ +H +R+
Sbjct: 112 TMKRDLLKAGVPETNIHLDYAGFRTLDSIVRAKKIFAS---DHFLIVTQRFHCERALFIA 168
Query: 193 QHFGINT 199
+ IN
Sbjct: 169 NAYQINA 175
>gi|91226499|ref|ZP_01261248.1| SanA protein [Vibrio alginolyticus 12G01]
gi|91189131|gb|EAS75412.1| SanA protein [Vibrio alginolyticus 12G01]
Length = 224
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 77/216 (35%), Gaps = 30/216 (13%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I +S LL S I ++L+ + + PQ + V+LG I +
Sbjct: 2 ILSISALSLLVSVIAID--RWVVLQAKESIFTEYEQIPQHEVA----VVLGTSKYIGKIL 55
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
RI + LY K ++SG + E LL++G
Sbjct: 56 NTYYTH-------RINAAIELYNQGKVKQ----FLLSGDNA-HRSYNEPWTMKRDLLKAG 103
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
V + I L+ T + + + + + ++V+ +H +R+ + I+ +
Sbjct: 104 VPEEVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVTQRFHCERALFIADAYSIDAQ-- 158
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ +AN T + ++E + + A+
Sbjct: 159 -------CLAVAGPTANKQKTSMRVRELLARVKAFL 187
>gi|153215353|ref|ZP_01949966.1| sanA protein [Vibrio cholerae 1587]
gi|124114796|gb|EAY33616.1| sanA protein [Vibrio cholerae 1587]
Length = 254
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 68/203 (33%), Gaps = 22/203 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ + HL R++ ++ + G I + Q + Q
Sbjct: 15 VFSALAHLRRLPWRRLSQTLLWLAIGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPFQ 71
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ V+LG I T+ +RI + LY+ K + ++SG +
Sbjct: 72 VAVVLGTSKYIGKTLNEYYT-------NRIDAAIALYQQGKVRN----FLLSGDNA-HRS 119
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E LL +G+ ++I L+ T + + + N ++++ +H +R
Sbjct: 120 YNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFD---TDNFLIITQRFHCER 176
Query: 188 SQLYFQHFGIN----TKASCSDY 206
+ ++ I S +
Sbjct: 177 ALFIARYQDIQASCLAVPGPSSH 199
>gi|297578787|ref|ZP_06940715.1| sanA protein [Vibrio cholerae RC385]
gi|297536381|gb|EFH75214.1| sanA protein [Vibrio cholerae RC385]
Length = 254
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 68/203 (33%), Gaps = 22/203 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ + HL R++ ++ + G I + Q + Q
Sbjct: 15 VFSALAHLRRLPWRRLSQALLWLAVGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPFQ 71
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ V+LG I T+ +RI + LY+ K + ++SG +
Sbjct: 72 VAVVLGTSKYIGKTLNEYYT-------NRIDAAIALYQQGKVRN----FLLSGDNA-HRS 119
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E LL +G+ ++I L+ T + + + N ++++ +H +R
Sbjct: 120 YNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFD---TDNFLIITQRFHCER 176
Query: 188 SQLYFQHFGIN----TKASCSDY 206
+ ++ I S +
Sbjct: 177 ALFIARYQDIQASCLAVPGPSSH 199
>gi|296119849|ref|ZP_06838403.1| putative secreted protein [Corynebacterium ammoniagenes DSM 20306]
gi|295967003|gb|EFG80274.1| putative secreted protein [Corynebacterium ammoniagenes DSM 20306]
Length = 204
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 60/173 (34%), Gaps = 16/173 (9%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG PS +R+ ET L + K + G +
Sbjct: 4 AIVVLGA--------SQYDGRPSRVLTARLNET--LATAKKHPGADIHFVTLGANMPGDR 53
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ V LL+ GVE + + DT + + + + + +++ H R
Sbjct: 54 FTEAGVARTYLLDRGVESHQVHAVPEGNDTQGSLEAAIKTHQELVDAPSTIITDPLHTLR 113
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+L + G + + + YS P + L E G++I +G
Sbjct: 114 VKLIARQLGWKAQVKGA--RDCPYSF-PQREWW---GGMLHEAGGLVIVVLQG 160
>gi|83313543|ref|YP_423807.1| hypothetical protein amb4444 [Magnetospirillum magneticum AMB-1]
gi|82948384|dbj|BAE53248.1| Uncharacterized conserved protein [Magnetospirillum magneticum
AMB-1]
Length = 206
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 58/168 (34%), Gaps = 38/168 (22%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ +V+L G R+ + L ++ + + + + G D
Sbjct: 47 DAVVVLTGG------------------AERLNSGIALLEAGRGRKLFVSGVHRGVDLPD- 87
Query: 127 GLAESIVYNNKLLESGVERDD----IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
L ++ V + I L + DT NA +++ + ++ LV++A
Sbjct: 88 ----------LLRQAHVSPERARCCIVLGHAADDTVGNATETAAWMGREGFSSLRLVTAA 137
Query: 183 YHLKRSQLYFQH----FGINTKASCSD-YLNAYYSIIPLSANFYLTEL 225
YH++RS L + I D + + P +A+ E
Sbjct: 138 YHMRRSLLELRRALPDATIIAHPVFPDAFKRDQWWRWPGTAHLLAVEY 185
>gi|165975902|ref|YP_001651495.1| SanA protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|303252686|ref|ZP_07338849.1| SanA protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|165876003|gb|ABY69051.1| SanA protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|302648654|gb|EFL78847.1| SanA protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
Length = 229
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/228 (16%), Positives = 82/228 (35%), Gaps = 29/228 (12%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
S W +I +S ++LF I II +++ + + ++ V
Sbjct: 14 SLWKRCLSICPRIALVSFAIVLFLSIAIFIIDYATGIYVKDNIYTDIEKLPKHRNA---V 70
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG P + + R+ ++L K +++SG + + E
Sbjct: 71 VLGTSKFYAKGTPNLYYK------YRLEAAVQLINKGKAK----KLLVSGDNKTPY-YNE 119
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
V N L G+ ++ I+ + T + +S + K + I+VS +H +R+
Sbjct: 120 PKVMLNDLYNMGIPKNMIEQDFAGYRTLDSIVRASKVYK---LEPFIIVSQQFHCERALF 176
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ IN + Y + + L+E++ + +
Sbjct: 177 IAKYHNINAVCFAAKYPEGHIKVR------------LREFLARIGMIW 212
>gi|163787816|ref|ZP_02182263.1| putative protein involved in barrier function of the cell envelope
[Flavobacteriales bacterium ALC-1]
gi|159877704|gb|EDP71761.1| putative protein involved in barrier function of the cell envelope
[Flavobacteriales bacterium ALC-1]
Length = 183
Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 59/156 (37%), Gaps = 16/156 (10%)
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G + + RI ++LY++ K I++SG + +K G E
Sbjct: 24 VLGTGKYAASGNINLYYK------YRIDAAVKLYRAGKIEY----ILVSGDNGRK-GYDE 72
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ + L+ G+ D I L+ T + + + +I ++S +H +R+
Sbjct: 73 PTDFKSDLIAKGIPEDKIFLDYAGFRTLDSVIRAKEI---FGQTSITIISQEFHNQRAVY 129
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELA 226
HF I A + N I + + A
Sbjct: 130 IANHFDIKAVAF--NAKNPRQGKITRAREYLARSKA 163
>gi|330976847|gb|EGH76878.1| hypothetical protein PSYAP_09345 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 66
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 184 HLKRSQLYFQHFGINTKASCSDYL-----NAYYSIIPLSANFYLTELALKEYIGILIA-- 236
H+ R++ F+ G + +L + +P S F + + L E G+L+
Sbjct: 1 HMPRARWSFEQAGFKVVGAPVGFLGVDNARPFGGWLPESRVFTQSGVLLNEAAGLLVYPW 60
Query: 237 -YYRGN 241
Y +G
Sbjct: 61 IYRKGQ 66
>gi|24216823|ref|NP_714304.1| SanA-like protein [Leptospira interrogans serovar Lai str. 56601]
gi|45659108|ref|YP_003194.1| vancomycin resistance protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24198192|gb|AAN51322.1| SanA-related protein [Leptospira interrogans serovar Lai str.
56601]
gi|45602354|gb|AAS71831.1| vancomycin resistance protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 230
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 53/151 (35%), Gaps = 8/151 (5%)
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
++P + EPS R+ + LY K I++SG + + E
Sbjct: 56 AVVPGASVYKNEPSAVLKDRLDCALELYHQGKVK----KILLSGDNGSIY-YNEVKPMLL 110
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+L++ V DI ++ T + + + +++I VS + R+ G
Sbjct: 111 YILKNEVNEKDIFVDHAGFRTLDTLVRAKEIFQ---IQDLIFVSQRVYQPRAAFLANKIG 167
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ +A SD F+ LA
Sbjct: 168 LKFQAFESDRRIYTSGPFSRFREFFARTLAW 198
>gi|258621650|ref|ZP_05716681.1| Protein sanA [Vibrio mimicus VM573]
gi|258585881|gb|EEW10599.1| Protein sanA [Vibrio mimicus VM573]
Length = 253
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 65/203 (32%), Gaps = 22/203 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ L C RK+ + ++ I + Q + Q
Sbjct: 14 VAFVAARLSCLPWRKLGQILLLSVIAVVSSLLAIDRWVTWQTQ---NNIISDTQNTPPFQ 70
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ V+LG I T+ +RI + LY+ K + ++SG +
Sbjct: 71 VAVVLGTSKYIGKTLNEYYT-------NRIDAAIVLYQQGKVRN----FLLSGDNA-HRS 118
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E LL +G+ ++I L+ T + + + N ++++ +H +R
Sbjct: 119 YNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKQIFD---TDNFLIITQRFHCER 175
Query: 188 SQLYFQHFGIN----TKASCSDY 206
+ + I S +
Sbjct: 176 ALFIAHYQDIQASCLAVPGPSSH 198
>gi|320156601|ref|YP_004188980.1| SanA protein [Vibrio vulnificus MO6-24/O]
gi|319931913|gb|ADV86777.1| SanA protein [Vibrio vulnificus MO6-24/O]
Length = 205
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 15/133 (11%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++ V+LG I T+ RI + LY+ K +++SG +
Sbjct: 18 DVAVVLGTSKYIGRTLNTYYTH-------RIDAAIELYRQNKVQH----LLLSGDNA-HR 65
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E LL++GV +I L+ T + + + + + ++V+ +H +
Sbjct: 66 SYNEPWTMKRDLLKAGVPETNIHLDYAGFRTLDSIVRAKKIFAS---DHFLIVTQRFHCE 122
Query: 187 RSQLYFQHFGINT 199
R+ + IN
Sbjct: 123 RALFIANAYQINA 135
>gi|86147499|ref|ZP_01065810.1| SanA protein [Vibrio sp. MED222]
gi|85834667|gb|EAQ52814.1| SanA protein [Vibrio sp. MED222]
Length = 278
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 76/221 (34%), Gaps = 16/221 (7%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ L ++ +K+ L IG + I + R + + + V+
Sbjct: 8 FRSHLLKAYKKLQGFLFGAFLVFLIGSAAVIAIDYWVSWQAEDRIIYDIDEVPELEVAVV 67
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG + T+ RI + L+ K ++SG + E
Sbjct: 68 LGTSKYLGRTLNDYYKH-------RIEAAIELFDREKVDQ----FLLSGDNA-HRSYNEP 115
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
LL++GV + I L+ T + + + N ++++ +H +R+
Sbjct: 116 WTMKRDLLKAGVPDERINLDYAGFRTLDSIVRAKKIFD---TDNFLIITQKFHCERALFI 172
Query: 192 FQHFGINTK-ASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
+ IN + + S + + I L F T+ L YI
Sbjct: 173 ANSYDINAQCLAVSGPTHHSGTSIRLREVFARTKAFLDLYI 213
>gi|183179591|ref|ZP_02957802.1| sanA protein [Vibrio cholerae MZO-3]
gi|183013002|gb|EDT88302.1| sanA protein [Vibrio cholerae MZO-3]
Length = 254
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 68/203 (33%), Gaps = 22/203 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ + HL R++ ++ + G I + Q + Q
Sbjct: 15 VFSALAHLRRLPWRRLSQTLLWLAIGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPFQ 71
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ V+LG I T+ +RI + LY+ K + ++SG +
Sbjct: 72 VAVVLGTSKYIGRTLNEYYT-------NRIDAAIALYQQGKVRN----FLLSGDNA-HRS 119
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E LL +G+ ++I L+ T + + + N ++++ +H +R
Sbjct: 120 YNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFD---TDNFLIITQRFHCER 176
Query: 188 SQLYFQHFGIN----TKASCSDY 206
+ ++ I S +
Sbjct: 177 ALFIARYQDIQASCLAVPGPSSH 199
>gi|260776084|ref|ZP_05884979.1| SanA protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260607307|gb|EEX33572.1| SanA protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 211
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 56/152 (36%), Gaps = 19/152 (12%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
+P+ + ++ V+LG T + + +RI + LY++ K + ++
Sbjct: 17 NPEQIGNFDVAVVLG-------TSKYLGKILNDYYTNRINAAIDLYQNDKVDN----FLL 65
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
SG + E LL++ V + I L+ T + + + N ++
Sbjct: 66 SGDNA-HRSYNEPWTMKRDLLKAEVPENHIYLDYAGFRTLDSIVRAKEIFD---TDNFLI 121
Query: 179 VSSAYHLKRSQLYFQHFGIN----TKASCSDY 206
++ +H +R+ IN S +
Sbjct: 122 ITQKFHCERALFIANFHNINAKCFAVPGPSTH 153
>gi|320184632|gb|EFW59429.1| SanA protein [Shigella flexneri CDC 796-83]
gi|332091879|gb|EGI96957.1| hypothetical protein SB359474_3411 [Shigella boydii 3594-74]
Length = 203
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 45/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ GV I +
Sbjct: 49 RIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQKALIAKGVPAKVIFCDYAGF 103
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + +I ++S +H +R+ + + I+ + LN +
Sbjct: 104 STLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYSIDAIGFNAPDLNMKHGF 158
>gi|325286814|ref|YP_004262604.1| hypothetical protein Celly_1910 [Cellulophaga lytica DSM 7489]
gi|324322268|gb|ADY29733.1| protein of unknown function DUF218 [Cellulophaga lytica DSM 7489]
Length = 211
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 76/220 (34%), Gaps = 31/220 (14%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + +F + LL F +I +Y P + ++LG
Sbjct: 1 MKKKIAILLFILIALPLLAIFCSNSVIKN---AANGKTYYAVNTVPHNRVG----LVLGT 53
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
+ + P RI T+ LYK+ K +++SG + K+ E +
Sbjct: 54 TSKLTNGSPNPYYV------HRINATIALYKAQKIDF----VLVSGDNGSKY-YNEPDTF 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L++ G+ + I L+ T + + + N+ ++S +H +R+ +
Sbjct: 103 KRDLVKKGIPAEKIFLDYAGFRTLDSMVRAHVI---FSLDNVTVISQKFHNERAIYIAEK 159
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
G+ + LN + + +EY+ +
Sbjct: 160 KGLTAVGFNAKDLNGKAGLKVQT----------REYLARV 189
>gi|329297902|ref|ZP_08255238.1| vancomycin high temperature exclusion protein [Plautia stali
symbiont]
Length = 241
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/224 (15%), Positives = 78/224 (34%), Gaps = 23/224 (10%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
I K F F+++ + + + + ++ + V+LG
Sbjct: 2 RILKRVFFGLFIIILLVMATALGLDRWISWRTAPFIYEDVASLPHRQVG--VVLGTAKYY 59
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ RI + Y S K + +++SG + E + L
Sbjct: 60 RTGVINQYY------LYRIQGALNAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRRAL 108
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+++GV+ DI L+ T + + + + I+++ +H +R+ QH GI
Sbjct: 109 IKAGVDPSDIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERALYIAQHLGIQ 165
Query: 199 TK----ASCSDYLNAYYSIIPLS-ANFYLTELALKE--YIGILI 235
+ S + L+ + + L +E ++G L+
Sbjct: 166 AQCYAVPSPKNMLSVRFREVGARLDALADLYLMKREPRFLGPLV 209
>gi|253578294|ref|ZP_04855566.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850612|gb|EES78570.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 199
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--NMQGKNIILVSSAYHLK 186
E + L+++GV I E Q+ T++NA +S + ++ + IL +YH +
Sbjct: 83 TEWEFLRDVLIKNGVPDQKILKEDQATFTYENAIYSRQVTDHAELEIERAILCCKSYHAR 142
Query: 187 RSQLYFQ----HFGINTKASCSDYLN 208
R +Y+Q +D +
Sbjct: 143 RCLMYYQLLYPKTEFYVVPVNADGIT 168
>gi|262402457|ref|ZP_06079018.1| SanA protein [Vibrio sp. RC586]
gi|262351239|gb|EEZ00372.1| SanA protein [Vibrio sp. RC586]
Length = 207
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 55/154 (35%), Gaps = 19/154 (12%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ Q + V+LG I T+ +RI + LY+ K +
Sbjct: 10 INDTQNTPPFQVAVVLGTSKYIGKTLNEYYT-------NRIDAAIELYQQGKVRN----F 58
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++SG + E LL +G+ ++I L+ T + + + + N
Sbjct: 59 LLSGDNA-HRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKQIFE---TNNF 114
Query: 177 ILVSSAYHLKRSQLYFQHFGIN----TKASCSDY 206
++++ +H +R+ + I S++
Sbjct: 115 LIITQRFHCERALFIAHYQDIQASCLAVPGPSNH 148
>gi|86747962|ref|YP_484458.1| hypothetical protein RPB_0836 [Rhodopseudomonas palustris HaA2]
gi|86570990|gb|ABD05547.1| Protein of unknown function DUF218 [Rhodopseudomonas palustris
HaA2]
Length = 240
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 60/180 (33%), Gaps = 37/180 (20%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ + + + IV+L G+ SR+ + + L +
Sbjct: 51 VEESRPSRAADGIVVLTGGS------------------SRVSDAVDLLA----SGYGKRL 88
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDD------IKLETQSLDTFQNAQFSSSMIKN 170
+ISG + G +E + V + L+ + +T NA +
Sbjct: 89 LISG-VHRTSGASE--------ISRSVPDSKDWLGCCVDLDRSAFNTRSNAAETRRWAHE 139
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY 230
+++I+V+S YH+ R+ H + + + + ++ L L EY
Sbjct: 140 RGFRSLIVVTSNYHMPRAIAEMSHAMPDIELIPFSVIGEKWRDEAWWSSGATLRLLLSEY 199
>gi|260596262|ref|YP_003208833.1| hypothetical protein CTU_04700 [Cronobacter turicensis z3032]
gi|260215439|emb|CBA27523.1| Uncharacterized protein ygjQ [Cronobacter turicensis z3032]
Length = 202
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 8/106 (7%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG D + E L GV I +
Sbjct: 44 RIEAAAALYHAGKVSW----LLVSG-DNSRADYDEPTAMAEALNRHGVPAAAIFCDYAGF 98
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
T + + + + I ++S A+H +R+ QH+GI+
Sbjct: 99 STLDSVVRARQVFQEN---RITIISQAFHNQRAIYLAQHYGIDAIG 141
>gi|258626405|ref|ZP_05721252.1| Protein sanA [Vibrio mimicus VM603]
gi|262171782|ref|ZP_06039460.1| SanA protein [Vibrio mimicus MB-451]
gi|258581457|gb|EEW06359.1| Protein sanA [Vibrio mimicus VM603]
gi|261892858|gb|EEY38844.1| SanA protein [Vibrio mimicus MB-451]
Length = 233
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 64/196 (32%), Gaps = 22/196 (11%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ C RK+ + ++ I + Q + Q + V+LG
Sbjct: 1 MSCLPWRKLGQILLLTVIAVVSSLLAIDRWVTWQTQ---NNIISDTQNTPPFQVAVVLGT 57
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
I T+ +RI + LY+ K + ++SG + E
Sbjct: 58 SKYIGKTLNEYYT-------NRIDAAIVLYQQGKVRN----FLLSGDNA-HRSYNEPWTM 105
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
LL +G+ ++I L+ T + + + N ++++ +H +R+ +
Sbjct: 106 KRDLLRAGIPAENISLDYAGFRTLDSIVRAKQIFD---TDNFLIITQRFHCERALFIAHY 162
Query: 195 FGIN----TKASCSDY 206
I S +
Sbjct: 163 QDIQASCLAVPGPSSH 178
>gi|258626686|ref|ZP_05721511.1| hypothetical protein VMB_28120 [Vibrio mimicus VM603]
gi|258581037|gb|EEW05961.1| hypothetical protein VMB_28120 [Vibrio mimicus VM603]
Length = 287
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 107 CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD-------DIKLETQSLDTFQ 159
+ I+ GG ++E+ + + V + D+ LE QS T +
Sbjct: 36 QCHENSSALIVFCGGITAGQTVSEAQRMHEYF-QQQVHQKGLVLQHVDVLLEQQSTSTVE 94
Query: 160 NAQFSSSM------IKNMQGKNIILVSSAYHLKR 187
N + + + + + + LVSS YHLKR
Sbjct: 95 NIEHLAHVLLASQRLHAGETLTLTLVSSDYHLKR 128
>gi|78183885|ref|YP_376319.1| hypothetical protein Syncc9902_0303 [Synechococcus sp. CC9902]
gi|78168179|gb|ABB25276.1| conserved hypothetical protein [Synechococcus sp. CC9902]
Length = 191
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 18/115 (15%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG-VERDDIKLETQ 153
R RL + + +++SGG ++ Y LL+ + + + L+ +
Sbjct: 48 DRERMGARLARQ-----LDLPLLVSGGSNRE--------YATWLLQEERLNPERVTLDYR 94
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL----YFQHFGINTKASCS 204
+ DT N +++ ++++LV+S HL RS GI+
Sbjct: 95 ARDTLSNFTSLVDELQSDGIQHVLLVTSEDHLARSMAVGQVVAGSRGIHLTGVPV 149
>gi|163869202|ref|YP_001610454.1| hypothetical protein Btr_2487 [Bartonella tribocorum CIP 105476]
gi|161018901|emb|CAK02459.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 221
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 57/153 (37%), Gaps = 31/153 (20%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
L+ P + I++L G RI + L + + +
Sbjct: 63 LVPPTPLPKADAIIVLTGGEH------------------RIETGLHLLQ----KGLGSRL 100
Query: 117 IISGGDPQKHGLAESIVY--NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+ISG + + + + +L+ ++ Q+++T NAQ S++ IK K
Sbjct: 101 LISGVNTSTNLKSFMHNMHISPQLISCCIDIGH-----QAINTRGNAQESAAWIKKHHYK 155
Query: 175 NIILVSSAYHLKRSQLYFQHF--GINTKASCSD 205
+ +V+ YH+ RS ++ I+ A
Sbjct: 156 TLYIVTHDYHIWRSMRELKYLMPDIHFIAYPVK 188
>gi|229520385|ref|ZP_04409810.1| SanA protein [Vibrio cholerae TM 11079-80]
gi|229342483|gb|EEO07476.1| SanA protein [Vibrio cholerae TM 11079-80]
Length = 254
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 66/192 (34%), Gaps = 18/192 (9%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ + HL RK+ ++ + G I + Q + Q
Sbjct: 15 VFSALAHLRRLPWRKLSQTLLWLAIGVVAGLLAIDRWVSWQTQN---NIINDAQNTPPFQ 71
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ V+LG I T+ +RI + LY+ K + ++SG +
Sbjct: 72 VAVVLGTSKYIGKTLNEYYT-------NRIDAAIALYQQGKVRN----FLLSGDNA-HRS 119
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E LL +G+ ++I L+ T + + + N ++++ +H +R
Sbjct: 120 YNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFD---TDNFLIITQRFHCER 176
Query: 188 SQLYFQHFGINT 199
+ ++ I
Sbjct: 177 ALFIARYQDIQA 188
>gi|190149786|ref|YP_001968311.1| SanA protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|307256494|ref|ZP_07538275.1| hypothetical protein appser10_4990 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|189914917|gb|ACE61169.1| SanA protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|306864904|gb|EFM96806.1| hypothetical protein appser10_4990 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 229
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/228 (16%), Positives = 82/228 (35%), Gaps = 29/228 (12%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
S W +I +S ++LF I II +++ + + ++ V
Sbjct: 14 SLWKRCLSICPRIALVSFAIVLFLSIAIFIIDYATGIYVKDNIYTDIEKLPKHRNA---V 70
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG P + + R+ ++L K +++SG + + E
Sbjct: 71 VLGTSKFYAKGTPNLYYK------YRLEAAVQLINKGKAK----KLLVSGDNKTPY-YNE 119
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
V N L G+ ++ I+ + T + +S + K + I+VS +H +R+
Sbjct: 120 PKVMLNDLYNMGIPKNMIEQDFAGYRTLDSIVRASKVYK---LEPFIIVSQQFHCERALF 176
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ IN + Y + + L+E++ + +
Sbjct: 177 IAKYHNINAVCFTAKYPEGHIKVR------------LREFLARIGMIW 212
>gi|262164189|ref|ZP_06031927.1| hypothetical protein VMA_000631 [Vibrio mimicus VM223]
gi|262026569|gb|EEY45236.1| hypothetical protein VMA_000631 [Vibrio mimicus VM223]
Length = 287
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 14/94 (14%)
Query: 107 CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD-------DIKLETQSLDTFQ 159
+ I+ GG ++E+ + + V++ D+ LE QS T +
Sbjct: 36 QCHENSSALIVFCGGVTVGQTVSEAQRMHEYF-QQQVQQKGLLLQHVDVLLEQQSTSTVE 94
Query: 160 NAQFSSSM------IKNMQGKNIILVSSAYHLKR 187
N + + + + + ++ LVSS YHLKR
Sbjct: 95 NIEHLAHVLLASQRLHAGETLSLTLVSSDYHLKR 128
>gi|116073939|ref|ZP_01471201.1| hypothetical protein RS9916_35852 [Synechococcus sp. RS9916]
gi|116069244|gb|EAU74996.1| hypothetical protein RS9916_35852 [Synechococcus sp. RS9916]
Length = 193
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 18/128 (14%)
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE-S 141
P RI R ++L + ++ +++SGG + Y + L+E
Sbjct: 34 PPERILVLGGDVDRERAGLQLARR-----LNLPLVVSGGSNPE--------YAHWLMETE 80
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ----LYFQHFGI 197
G+ + L+ ++ DT N ++ ++++LV+S HL R+ L GI
Sbjct: 81 GLREGQVVLDYRANDTLGNFTSLVDDLREQGVQHVLLVTSEDHLPRALTVGSLVAGSRGI 140
Query: 198 NTKASCSD 205
Sbjct: 141 RLTGVPVS 148
>gi|254292607|ref|YP_003058630.1| hypothetical protein Hbal_0231 [Hirschia baltica ATCC 49814]
gi|254041138|gb|ACT57933.1| protein of unknown function DUF218 [Hirschia baltica ATCC 49814]
Length = 197
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 79/234 (33%), Gaps = 61/234 (26%)
Query: 16 LCQSIRKIFFMSC-FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
L + IR F + C F++ + F+ + L QF P + ++ L
Sbjct: 4 LTKKIRNAFLVFCLFLIGYDFVSFSYRAAQLATP-QFDTSNP----------HAVIALTG 52
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG--GDPQKHGLAESI 132
G+ +RI + K + + ISG + + +A +
Sbjct: 53 GS------------------NRIAFAAEIAKDQ-----NLPLFISGVNREAKPDEVAIAA 89
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ E L ++ T++N + +I+V+S YH++R+ L
Sbjct: 90 GVDTAFFECC-----TTLGYKARTTYENGLEVAQWSTKSGYTRLIIVTSNYHMERALLEL 144
Query: 193 QHF-------GINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
+ G+ AS + +A+++ + + GI +R
Sbjct: 145 ERAMPNVTLTGL-AVASPAIKADAWWTDMRSAKRM-----------GIEWVKWR 186
>gi|323163136|gb|EFZ48969.1| sanA [Escherichia coli E128010]
gi|323183035|gb|EFZ68433.1| sanA [Escherichia coli 1357]
Length = 207
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 45/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ GV I +
Sbjct: 53 RIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKGVPAKVIFCDYAGF 107
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + +I ++S +H +R+ + + I+ + LN +
Sbjct: 108 STLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYSIDAIGFNAPDLNMKHGF 162
>gi|163793809|ref|ZP_02187783.1| hypothetical protein BAL199_12291 [alpha proteobacterium BAL199]
gi|159180920|gb|EDP65437.1| hypothetical protein BAL199_12291 [alpha proteobacterium BAL199]
Length = 231
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/228 (15%), Positives = 73/228 (32%), Gaps = 39/228 (17%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+S I + ++L W I L R P + +V+L G+
Sbjct: 14 RSGYGIGLLITVVVLSLATAWTI-------GLVRYASRIPTQPTLVEPAAAVVVLTGGSK 66
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV---- 133
R+ + L + +SG H + + +
Sbjct: 67 ------------------RMDAGVALLA----KGTAPVLFVSG---VDHRVDPARIRDLI 101
Query: 134 --YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ L ++ ++ + S DT NA+ ++ + + ++ILV+S YH+ R++L
Sbjct: 102 PDAGDSLDQATIDCCVVLGYGAS-DTLGNARETALWARATERTSLILVTSNYHMPRARLE 160
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYR 239
F H + + + L E+ + A R
Sbjct: 161 FTHALPEVRLVPYPVIPPDVRMDAWWRWPGTLGLVAGEWTKYVFARVR 208
>gi|296447118|ref|ZP_06889050.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
gi|296255387|gb|EFH02482.1| protein of unknown function DUF218 [Methylosinus trichosporium
OB3b]
Length = 232
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 62/179 (34%), Gaps = 33/179 (18%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
LL G+ + + F+ P + +V+L G+
Sbjct: 22 LLLCLAGFLASGFVA-GFIGFALSLERAEPILTVQADGVVVLTGGS-------------- 66
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV--YNNKLLESGVERDDI 148
RI E L + ++I+G + G + + + +L + ++
Sbjct: 67 ----DRIHEAAELLARGQAR----RLLITGVNKSTRGPEIAKLLPVSRQLFDCCID---- 114
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQHF--GINTKASCS 204
L ++LDT NA + K G ++I+V+S YH+ R+ + G+
Sbjct: 115 -LGYEALDTAGNAAETREWAKARGIGGSLIVVTSNYHMPRALVELSAALPGVELYPFPV 172
>gi|307151691|ref|YP_003887075.1| hypothetical protein Cyan7822_1814 [Cyanothece sp. PCC 7822]
gi|306981919|gb|ADN13800.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7822]
Length = 200
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 54/168 (32%), Gaps = 16/168 (9%)
Query: 55 RPLLSPQWKKDGNII----VLLGNGTTIIPTIPAIRIEP-SFQSYSRIFETMRLYKSCKQ 109
RP II V+ G I + ++P + E R
Sbjct: 7 RPKQKSPLTLLRQIIYLLPVVSVGGWWSYNEIQSYLVKPEAIVVLGGHEERERYAAHLAS 66
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
+ I +S G P + ++GV + L+ ++ DT N +K
Sbjct: 67 KNPTLPIWVSSGSPSNY-------VKRIFAKAGVNSTRLHLDYKAKDTVTNFTTLVDQLK 119
Query: 170 NMQGKNIILVSSAYHLKRS----QLYFQHFGINTKASCSDYLNAYYSI 213
++ L++S H++R+ ++ F GI K S
Sbjct: 120 AQGIDSVYLITSENHMRRAWIVGEIVFGSRGIVIKPLAVPSHARPESF 167
>gi|91212515|ref|YP_542501.1| hypothetical protein UTI89_C3524 [Escherichia coli UTI89]
gi|91074089|gb|ABE08970.1| hypothetical protein YgjQ [Escherichia coli UTI89]
Length = 233
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ GV I +
Sbjct: 79 RIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKGVPAKVIFCDYAGF 133
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
T + ++ + +I ++S +H +R+ + +GI+ + LN
Sbjct: 134 STLDSVVRANKVFSEN---HITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLN 183
>gi|312886440|ref|ZP_07746049.1| protein of unknown function DUF218 [Mucilaginibacter paludis DSM
18603]
gi|311301068|gb|EFQ78128.1| protein of unknown function DUF218 [Mucilaginibacter paludis DSM
18603]
Length = 416
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 37/119 (31%), Gaps = 16/119 (13%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
I++ G G + + RL Q I++SGG + +
Sbjct: 255 ILVPGAGGEDYTSPLSAEGML----------RCRLAAQKYQSGAAPFIMVSGGKVHPYKV 304
Query: 129 --AESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNIILVSS 181
E+ L+ + I ++ + T N + +I K ++++
Sbjct: 305 KFCEAEEMKRYLMNTLHIPESAIIMDPHARHTTTNLRNCVRLIYRYGIPYNKPGLIITD 363
>gi|117625394|ref|YP_858717.1| hypothetical protein APECO1_3333 [Escherichia coli APEC O1]
gi|218560170|ref|YP_002393083.1| thioredoxin-like [Escherichia coli S88]
gi|237706153|ref|ZP_04536634.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|115514518|gb|ABJ02593.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|218366939|emb|CAR04710.1| putative thioredoxin-like [Escherichia coli S88]
gi|226899193|gb|EEH85452.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|294491677|gb|ADE90433.1| putative SanA protein [Escherichia coli IHE3034]
gi|307625302|gb|ADN69606.1| putative thioredoxin-like protein [Escherichia coli UM146]
gi|315288869|gb|EFU48267.1| conserved hypothetical protein [Escherichia coli MS 110-3]
gi|323951383|gb|EGB47258.1| hypothetical protein ERKG_02026 [Escherichia coli H252]
gi|323957755|gb|EGB53469.1| hypothetical protein ERLG_01081 [Escherichia coli H263]
Length = 230
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ GV I +
Sbjct: 76 RIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKGVPAKVIFCDYAGF 130
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
T + ++ + +I ++S +H +R+ + +GI+ + LN
Sbjct: 131 STLDSVVRANKVFSEN---HITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLN 180
>gi|87123615|ref|ZP_01079466.1| hypothetical protein RS9917_07130 [Synechococcus sp. RS9917]
gi|86169335|gb|EAQ70591.1| hypothetical protein RS9917_07130 [Synechococcus sp. RS9917]
Length = 214
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 18/129 (13%)
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P RI R ++L + + +++SGG + Y + L++
Sbjct: 32 PQPPQRILVLGGDVDREKAGLQLGRR-----LALPVVVSGGSNPE--------YAHWLMD 78
Query: 141 SG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ----LYFQHF 195
+ + ++L+ ++ DT N +K ++++LV+S HL R+ L
Sbjct: 79 REGLSQSRVRLDYRAKDTLGNFTSLVDDLKREGVQHMLLVTSRDHLPRAMAVGRLVAGSR 138
Query: 196 GINTKASCS 204
GI A
Sbjct: 139 GIRLTAVPV 147
>gi|90410373|ref|ZP_01218389.1| Putative SanA protein [Photobacterium profundum 3TCK]
gi|90328614|gb|EAS44898.1| Putative SanA protein [Photobacterium profundum 3TCK]
Length = 226
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 71/208 (34%), Gaps = 34/208 (16%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII------VLLGNGTTIIPTIPAI 85
F+ + ++ T L L + S + D + I ++LG I T+
Sbjct: 9 FFAVLCIILVSTSL---LIDRWVSASTSDRIFYDVSHIPSRSIGLVLGTSKYIAKTLNPY 65
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
R+ + LY+ K + ++SG + E LL+SG+
Sbjct: 66 YSY-------RMEAALELYQQGKIN----VFLLSGDNA-HRSYNEPWTMKRDLLKSGIPD 113
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
DI L+ T + + + + + ++++ +H +R+ + I+
Sbjct: 114 SDIVLDYAGFRTLDSVVRAKEVFEA---DHFVIITQKFHCERALFIAESNNIDAICLAV- 169
Query: 206 YLNAYYSIIPLSANFYLTELALKEYIGI 233
P F ++ L+E +
Sbjct: 170 ---------PEPRGFAGFKIRLREVLAR 188
>gi|121587797|ref|ZP_01677556.1| sanA protein [Vibrio cholerae 2740-80]
gi|153819088|ref|ZP_01971755.1| sanA protein [Vibrio cholerae NCTC 8457]
gi|121547961|gb|EAX58042.1| sanA protein [Vibrio cholerae 2740-80]
gi|126510371|gb|EAZ72965.1| sanA protein [Vibrio cholerae NCTC 8457]
Length = 221
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 55/154 (35%), Gaps = 19/154 (12%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ Q + V+LG I T+ +RI + LY+ K +
Sbjct: 28 INDAQNTPPFQVAVVLGTSKYIGKTLNEYYT-------NRIDAAIALYQQGKVRN----F 76
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++SG + E LL +G+ ++I L+ T + + + N
Sbjct: 77 LLSGDNA-HRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFD---TDNF 132
Query: 177 ILVSSAYHLKRSQLYFQHFGIN----TKASCSDY 206
++++ +H +R+ ++ I S++
Sbjct: 133 LIITQRFHCERALFIARYQDIQASCLAVPGPSNH 166
>gi|262191641|ref|ZP_06049819.1| SanA protein [Vibrio cholerae CT 5369-93]
gi|262032483|gb|EEY51043.1| SanA protein [Vibrio cholerae CT 5369-93]
Length = 221
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 65/181 (35%), Gaps = 20/181 (11%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLL-SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+L+ IG + + + + Q ++ Q + V+LG I T+
Sbjct: 1 MLWLTIGVLAGLLAIDRWVSWQTQNNIINDAQNTPPFQVAVVLGTSKYIGKTLNEYYT-- 58
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
+RI + LY+ K + ++SG + E LL +G+ ++I
Sbjct: 59 -----NRIDAAIALYQQGKVRN----FLLSGDNA-HRSYNEPWTMKRDLLRAGIPAENIS 108
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN----TKASCSD 205
L+ T + + + N ++++ +H +R+ ++ I S
Sbjct: 109 LDYAGFRTLDSIVRAKEIFD---TDNFLIITQRFHCERALFIARYQDIQASCLAVPGPSS 165
Query: 206 Y 206
+
Sbjct: 166 H 166
>gi|307545182|ref|YP_003897661.1| hypothetical protein HELO_2592 [Halomonas elongata DSM 2581]
gi|307217206|emb|CBV42476.1| hypothetical protein HELO_2592 [Halomonas elongata DSM 2581]
Length = 202
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 31/140 (22%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I+ LG+ +P + RL++ +I+SGG +
Sbjct: 10 ADAILCLGSNDIQVPRV-----------------GARLWREKWAPY----LIMSGGLAHQ 48
Query: 126 HGLA-------ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KN 175
H LA E+ V++ + +GV RD I E + T N + + + +
Sbjct: 49 HDLAATGWSQPEADVFSREARHAGVPRDAILCERAARHTGDNFRLTRCLAEESGIMVSGR 108
Query: 176 IILVSSAYHLKRSQLYFQHF 195
+I+V+ Y +R+Q +
Sbjct: 109 LIIVAKPYMTRRAQATAEMA 128
>gi|332710355|ref|ZP_08430303.1| hypothetical protein LYNGBM3L_50550 [Lyngbya majuscula 3L]
gi|332350904|gb|EGJ30496.1| hypothetical protein LYNGBM3L_50550 [Lyngbya majuscula 3L]
Length = 208
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 70/222 (31%), Gaps = 49/222 (22%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
Y + +R +F ++ ++ SFI + L HLQ +I
Sbjct: 17 FGYPRKTLRKMRVVFTVTILLIALSFIPIRLG----LAHLQSPTPE------------VI 60
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
+ LG T R T + + I +S G P
Sbjct: 61 LTLGGDIT------------------REKFTAEFAQQH----PNLDIWVSSGQPTPQ--- 95
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E+G+ + ++ +++DT N + ++ L++S +H++RS
Sbjct: 96 ----AQKVFREAGIPDQQVHIDRRAIDTVTNFTSLVQDFQTHDIHHVYLITSDFHMRRSI 151
Query: 190 LY----FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
F GI S + ++ + + + +
Sbjct: 152 AIAFFVFGSHGIAFTPVAIPSQRPEESWLRVARDVGRSVVWI 193
>gi|170766004|ref|ZP_02900815.1| putative SanA protein [Escherichia albertii TW07627]
gi|170125150|gb|EDS94081.1| putative SanA protein [Escherichia albertii TW07627]
Length = 230
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 74/222 (33%), Gaps = 27/222 (12%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQF-SYQRPLLSPQWKKDG 66
+ +C S R+ ++CF+LL + I ++K Q ++ P
Sbjct: 4 AFACFLRRVCFS-RRALKIACFLLLAAGAMIFIADRTMVKASQQLTWSDVDAVPARNVG- 61
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+LLG + R+ LY + K +++SG + K+
Sbjct: 62 ---LLLGA------------KPGNNYFTRRVNSAAALYHAGKVKW----LLVSGDNGSKN 102
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
E+ L+ GV I + T + ++ + +I ++S +H +
Sbjct: 103 -YDEASGMQQALIAKGVPAKAIFCDYAGFSTLDSVVRANKVFGEN---HITIISQEFHNQ 158
Query: 187 RSQLYFQHFGINTKASCS-DYLNAYYSIIPLSANFYLTELAL 227
R+ + + I+ + D ++ L +
Sbjct: 159 RAIWLAKQYNIDAIGFNAPDLEKGRGKLVRLREKLARVSAVI 200
>gi|163844128|ref|YP_001628532.1| hypothetical protein BSUIS_A1952 [Brucella suis ATCC 23445]
gi|163674851|gb|ABY38962.1| protein of unknown function DUF218 [Brucella suis ATCC 23445]
Length = 211
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 51/162 (31%), Gaps = 12/162 (7%)
Query: 76 TTIIPTIPAIRIEPSFQSYS-RIFETMRLYKSCKQHSMHCTIIISGGDPQKHG----LAE 130
I + I SY R+ E + +I +G + +E
Sbjct: 16 HRIYDPLEGADIIIGLGSYDPRVAERAS---DLYLEGLAPWLIFTGRSGRGTDKLYKASE 72
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ + + GV I +E + + +N +FS + I V+ +R
Sbjct: 73 AEAFAEIAIRRGVPERAIIIEPNATNIGENIRFSREKLAWDAVSG-IFVTKPQTQRRVHA 131
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+AS S L ++ + E+ + E IG
Sbjct: 132 TVLRQWPEARASISAPLVSFEE---QPTAEFPLEMLIHEMIG 170
>gi|116329443|ref|YP_799163.1| SanA-related protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116122187|gb|ABJ80230.1| SanA-related protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 230
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 8/151 (5%)
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
I+P + EPS R+ + LY K I++SG + + E
Sbjct: 56 AIVPGASVYKNEPSAILKDRLDCALELYHQGKVK----KILLSGDNGSIY-YNEVKPMLL 110
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+L++ V DI ++ T + + + K++I VS + R+ G
Sbjct: 111 YILKNEVNEKDIFVDHAGFRTLDTLIRAKEIFQ---IKDLIFVSQKVYQPRAAFLANKIG 167
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ +A SD F+ LA
Sbjct: 168 LRFQAFESDRKIYTSGPFSRFREFFARTLAW 198
>gi|148256823|ref|YP_001241408.1| hypothetical protein BBta_5542 [Bradyrhizobium sp. BTAi1]
gi|146408996|gb|ABQ37502.1| hypothetical protein BBta_5542 [Bradyrhizobium sp. BTAi1]
Length = 195
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R RL++ I+SGG +E + + ++ GV D I E ++
Sbjct: 45 RAATAARLWEQGYFRHA----IVSGGVTPGAEASECALIKDAMVRRGVPADRILEEHHAM 100
Query: 156 DTFQNAQFSSSMIKN----MQGKNIILVSSAYHLKRSQLYFQH 194
+T +N S +I + +I + +++ +R + Q
Sbjct: 101 NTGENVLLSLPVIDTALGLANVRTVICLGNSWTARRYAMTLQR 143
>gi|116329953|ref|YP_799671.1| SanA-related protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116123642|gb|ABJ74913.1| SanA-related protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 230
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 8/151 (5%)
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
I+P + EPS R+ + LY K I++SG + + E
Sbjct: 56 AIVPGASVYKNEPSAILKDRLDCALELYHQGKVK----KILLSGDNGSIY-YNEVKPMLL 110
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFG 196
+L++ V DI ++ T + + + K++I VS + R+ G
Sbjct: 111 YILKNEVNEKDIFVDHAGFRTLDTLIRAKEIFQ---IKDLIFVSQKVYQPRAAFLANKIG 167
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ +A SD F+ LA
Sbjct: 168 LRFQAFESDRKIYTSGPFSRFREFFARTLAW 198
>gi|288935718|ref|YP_003439777.1| hypothetical protein Kvar_2859 [Klebsiella variicola At-22]
gi|288890427|gb|ADC58745.1| protein of unknown function DUF218 [Klebsiella variicola At-22]
Length = 266
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 55/162 (33%), Gaps = 46/162 (28%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+++VL GN + P+ + R+ T++ISGG
Sbjct: 35 PQVDVVVLAGN-----------AVIPTIDAACRLAAA-----------QDVTLLISGGVG 72
Query: 124 QKH-------------------GLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQF 163
G E+ + + + + R + +E QS + +NA+F
Sbjct: 73 HSTNYLYEAVRQDTRYRMLPVAGRPEAHILADIAHDYWHIPRSRLVVEDQSTNCGENARF 132
Query: 164 SSSMIKNMQG--KNIILVSSAYHLKRSQLYFQH--FGINTKA 201
+ + ++N + I++ +R+ F G+ T
Sbjct: 133 TRTTLENGGIPHRRGIVIQDPTMQRRTMATFARVWQGVTTPP 174
>gi|294010104|ref|YP_003543564.1| hypothetical protein SJA_C1-01180 [Sphingobium japonicum UT26S]
gi|292673434|dbj|BAI94952.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 176
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 59/175 (33%), Gaps = 41/175 (23%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I LL +G+ L + L + + IV+L G
Sbjct: 2 IVRFIAVTLLGWMLGFAWFAIFLPQPL------------DGRQTDAIVVLTGG------- 42
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN--NKLLE 140
RI + L + M +ISG D + + Y +L
Sbjct: 43 -----------AGRIDRGLALLQDGAAKRM----LISGVDRSVRPVELAAQYKVPERLFS 87
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
I L +++DT NA ++ ++ K + L+++ +H++RS L +
Sbjct: 88 CC-----ITLGREAIDTRSNAIETAHWLERRDFKTVRLITTDWHMRRSALELRQA 137
>gi|317048753|ref|YP_004116401.1| hypothetical protein Pat9b_2545 [Pantoea sp. At-9b]
gi|316950370|gb|ADU69845.1| protein of unknown function DUF218 [Pantoea sp. At-9b]
Length = 257
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 36/108 (33%), Gaps = 26/108 (24%)
Query: 110 HSMHCTIIISGGDPQKHGL-------------------AESI---VYNNKLLESGVERDD 147
++ISGG L +E+ D
Sbjct: 53 KKYQLPLLISGGIGHSTPLLAQMMAAHPLYRQIDTQGKSEAEMLGAMARLFAAL--PDDQ 110
Query: 148 IKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQ 193
+ LE QS + +NA FS ++ + Q + +ILV +R+ F+
Sbjct: 111 LLLEDQSRNCGENAAFSQQLLDQVAWQPQRVILVQDPLMQRRTWETFR 158
>gi|297198554|ref|ZP_06915951.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197715483|gb|EDY59517.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 199
Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 45/129 (34%), Gaps = 13/129 (10%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+V+LG + R R+ +R + H +I S G
Sbjct: 38 TAVVVLGYRNSGATVNLVNRW--------RVRAGIRSATADGAHGTC--VIFS-GGTTGG 86
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
G E+ + + + LE +S T++N +++N + +VS H
Sbjct: 87 GATEARLMADYAKSVLAFDGPVLLEDRSTTTWENIANVIPLLENA--DRVKIVSQPAHAL 144
Query: 187 RSQLYFQHF 195
+++ Y +
Sbjct: 145 KARAYLRRQ 153
>gi|114326797|ref|YP_743954.1| hypothetical protein GbCGDNIH1_0133 [Granulibacter bethesdensis
CGDNIH1]
gi|114314971|gb|ABI61031.1| hypothetical protein GbCGDNIH1_0133 [Granulibacter bethesdensis
CGDNIH1]
Length = 216
Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 63/185 (34%), Gaps = 26/185 (14%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
S R M + F +G + + L F++Q + + + IV+L G
Sbjct: 17 SRRMGRAMVSVLNGFGLLGGFALLVLSGGFLWFAWQSQHVL-RAPSHADGIVVLTGG--- 72
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
R+ ++L + + ++ISG G + +
Sbjct: 73 ---------------AERVATGLKLLAAGR----GSVLLISG---VAKGASLGTLARVAG 110
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
++ + L ++ T NA ++ +++I+V++ YH+ R+ + +
Sbjct: 111 IDPTPLEGRVMLGYEAATTRGNALETADWAHERHLRSVIVVTAGYHMPRALAELRRAMPD 170
Query: 199 TKASC 203
Sbjct: 171 VILYP 175
>gi|218709194|ref|YP_002416815.1| hypothetical protein VS_1201 [Vibrio splendidus LGP32]
gi|218322213|emb|CAV18327.1| Protein sanA [Vibrio splendidus LGP32]
Length = 296
Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 76/221 (34%), Gaps = 16/221 (7%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ L ++ +K+ L +G + I + R + + + V+
Sbjct: 26 FRSHLLKAYKKLQGFLFGAFLVFLVGSAAVIAIDYWVSWQAEDRIIYDIDEVPELEVAVV 85
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG + T+ RI + L+ K ++SG + E
Sbjct: 86 LGTSKYLGRTLNDYYKH-------RIEAAIELFDREKVDQ----FLLSGDNA-HRSYNEP 133
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
LL++GV + I L+ T + + + N ++++ +H +R+
Sbjct: 134 WTMKRDLLKAGVPDERINLDYAGFRTLDSIVRAKKIFD---TDNFLIITQKFHCERALFI 190
Query: 192 FQHFGINTK-ASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
+ IN + + S + + I L F T+ L YI
Sbjct: 191 ANSYDINAQCLAVSGPTHHSGTSIRLREVFARTKAFLDLYI 231
>gi|332827361|gb|EGK00118.1| hypothetical protein HMPREF9455_03525 [Dysgonomonas gadei ATCC
BAA-286]
Length = 218
Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 15/152 (9%)
Query: 54 QRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMH 113
++LG I + RI LY + K +
Sbjct: 40 NYVFNHTDSIPPQKAALVLGAARY-------IGGRQNLYFTYRIRAAKELYDAGKVKA-- 90
Query: 114 CTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
++SG D E+ ++ L+E+GV D I ++ L T + S +
Sbjct: 91 --FVVSG-DNSTKDYNEAQDMHDALVEAGVPGDIIYMDYAGLRTLDSVVRMSEI---FGQ 144
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
K+ I+VS +H +R+ Q++G+ +
Sbjct: 145 KSFIIVSQEFHNERAIFLAQYYGLEAYGYNAK 176
>gi|294085432|ref|YP_003552192.1| hypothetical protein SAR116_1865 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292665007|gb|ADE40108.1| protein of unknown function DUF218 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 207
Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 62/181 (34%), Gaps = 36/181 (19%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
++ + C ++ F + L R + IV+ G
Sbjct: 15 RNRETALTVICILVAFMLASFQHFVLTL--------PRGETDFTKLDHTDGIVVTTGGQQ 66
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
R+ E + L ++ISG G+ ++++
Sbjct: 67 ------------------RLVEGLNLL----VSGTTDKVLISG---VGKGVNKAVLVQEL 101
Query: 138 -LLESGVER--DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L + V ++LE +LDT NA + + I K+I LV++ YH+ R+++ F
Sbjct: 102 NLDDQQVSALFCCVELEYGALDTRGNALAARAWIDLNGLKSIRLVTANYHMPRAEIVFSR 161
Query: 195 F 195
Sbjct: 162 A 162
>gi|156935632|ref|YP_001439548.1| hypothetical protein ESA_03497 [Cronobacter sakazakii ATCC BAA-894]
gi|156533886|gb|ABU78712.1| hypothetical protein ESA_03497 [Cronobacter sakazakii ATCC BAA-894]
Length = 215
Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 8/106 (7%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG D + E L GV I +
Sbjct: 57 RIEAAAGLYHAGKVSW----LLVSG-DNSRADYDEPTAMAEALNRHGVPAAAIFCDYAGF 111
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
T + + + + I ++S A+H +R+ QH+GI+
Sbjct: 112 STLDSVVRAREVFQEN---RITIISQAFHNQRAIYLAQHYGIDAIG 154
>gi|87198723|ref|YP_495980.1| hypothetical protein Saro_0699 [Novosphingobium aromaticivorans DSM
12444]
gi|87134404|gb|ABD25146.1| protein of unknown function DUF218 [Novosphingobium aromaticivorans
DSM 12444]
Length = 182
Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 61/173 (35%), Gaps = 47/173 (27%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
R++ + FI + + RP P + IV+L G+
Sbjct: 7 FRRLLSLLMIAWALGFIWFAVFL-----------PRPAAEP---ARTDGIVVLTGGS--- 49
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
RI +RL ++ +++SG D + +
Sbjct: 50 ---------------GRIPHALRLLQTGAGR----KLLVSGVDREVRP-------REFAV 83
Query: 140 ESGVERD----DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E V I L ++DT NA S+ ++ + +++ LV++ +H++R+
Sbjct: 84 EYDVPSRLMTCCIVLGYDAVDTRSNAVESARWMQTNRIRSVRLVTTDWHMRRA 136
>gi|302384409|ref|YP_003820232.1| hypothetical protein Bresu_3303 [Brevundimonas subvibrioides ATCC
15264]
gi|302195037|gb|ADL02609.1| protein of unknown function DUF218 [Brevundimonas subvibrioides
ATCC 15264]
Length = 208
Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 64/188 (34%), Gaps = 39/188 (20%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K + + L +G + R L + IV L
Sbjct: 2 KFLALVGIVGLIWLVGLFAFADRV---------RNLTPADEPARADGIVAL--------- 43
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG--GDPQKHGLAESIVYNNKLL 139
+ S R+ +RL + K ++ISG + ++ L E +N+L
Sbjct: 44 --------TGPSAERVNAAVRLLEQDKGE----RVLISGVNREVRRQELRELTPGSNRLF 91
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GI 197
V+ ++ DT NAQ ++ + ++I+V+S YH+ RS L + G+
Sbjct: 92 NCCVDLGF-----EAEDTGGNAQEIAAWAGSKNYTSLIVVTSDYHMPRSLLEIRSAAPGL 146
Query: 198 NTKASCSD 205
Sbjct: 147 ELTPYAVS 154
>gi|239833152|ref|ZP_04681481.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825419|gb|EEQ96987.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 227
Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 11/163 (6%)
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH----GLAES 131
P A I R+ E M ++ +G +E+
Sbjct: 32 CIYDPLETADVIIGLGSYDPRVAERAA---DLFLEGMATWLVFTGKSGHWTEKLYKNSEA 88
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ + GV I +E + + +N +FS + + ILV+ +R
Sbjct: 89 EAFAEIAIRRGVPEKAITIEPNATNIGENIRFSREKLAP-GAISAILVTKPQTQRRVLAT 147
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+AS + L A+ + E+ + E G L
Sbjct: 148 VARQWPEARASITAPLTAFED---QPTADHPVEMLVHEMTGDL 187
>gi|320174524|gb|EFW49660.1| SanA protein [Shigella dysenteriae CDC 74-1112]
Length = 191
Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ ES L+ GV I +
Sbjct: 37 RIDTAAALYHAGKVKW----LLVSGDNGRKNYDEES-GMQKALIAKGVPAKVIFCDYAGF 91
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + +I ++S +H +R+ + + I+ + LN +
Sbjct: 92 STLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYSIDAIGFNAPDLNMKHGF 146
>gi|163801101|ref|ZP_02195001.1| SanA protein [Vibrio sp. AND4]
gi|159175450|gb|EDP60247.1| SanA protein [Vibrio sp. AND4]
Length = 244
Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 15/137 (10%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ + V+LG I + RI + LYK K ++SG +
Sbjct: 57 PEHEVAVVLGTSKYIGKILNTYYSH-------RINAAIELYKKGKVRQ----FLLSGDNA 105
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E LL++GV D I L+ T + + + + + ++V+ +
Sbjct: 106 -HRSYNEPWTMKRDLLKAGVPEDVIHLDYAGFRTLDSIVRAKKIFAS---ERFLIVTQRF 161
Query: 184 HLKRSQLYFQHFGINTK 200
H +R+ + I+ +
Sbjct: 162 HCERALFIADAYNIDAQ 178
>gi|148927096|ref|ZP_01810727.1| protein of unknown function DUF218 [candidate division TM7
genomosp. GTL1]
gi|147887442|gb|EDK72885.1| protein of unknown function DUF218 [candidate division TM7
genomosp. GTL1]
Length = 220
Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 22/132 (16%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG------- 121
I + G+ + + S + E R+Y + I G
Sbjct: 8 IAVFGSAYSFEKQCFPDHMYLS------LDEAARMYHE----NQQIQGIAVCGLAAINDL 57
Query: 122 -DPQKHGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV 179
+ E+ L E V I ++ QS+DT N ++I +NI L
Sbjct: 58 RRGRIPPRPEAHEMKQYLTEQHDVPGAAIYIDDQSVDTTHNFLNLRNIILQEGWQNIYLP 117
Query: 180 SSAYHLKRSQLY 191
++A R+
Sbjct: 118 TAA---GRAARI 126
>gi|148240589|ref|YP_001225976.1| hypothetical protein SynWH7803_2253 [Synechococcus sp. WH 7803]
gi|147849128|emb|CAK24679.1| Uncharacterized conserved secreted protein [Synechococcus sp. WH
7803]
Length = 195
Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 68/186 (36%), Gaps = 44/186 (23%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
+ F+L+ + IG + T L + + L+ Q + I++LG
Sbjct: 4 GIRSFLLVSALIGGAAMATPL-----RPFAKAALTRQDPQR---ILVLGG---------- 45
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG-V 143
R +RL + + +++SGG + Y L+E +
Sbjct: 46 --------DAERERIGLRLARR-----LALPLVVSGGTNPE--------YARWLMEHEGL 84
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL----YFQHFGINT 199
++++L+ ++ DT N ++ ++++LV+S HL R+ L GI
Sbjct: 85 GTNEVRLDYRAQDTLGNFTSLVDELQAEGVEHVLLVTSEDHLPRALLVGGVVAGSRGIRL 144
Query: 200 KASCSD 205
Sbjct: 145 TGVPVS 150
>gi|119510114|ref|ZP_01629253.1| hypothetical protein N9414_00620 [Nodularia spumigena CCY9414]
gi|119465175|gb|EAW46073.1| hypothetical protein N9414_00620 [Nodularia spumigena CCY9414]
Length = 224
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 54/138 (39%), Gaps = 19/138 (13%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
I + + ++ K++ +I SG L ++ + E ++ +E +
Sbjct: 42 IRREIYVAEATKKYPQIPVLISSGSQLPCIWL----IFQREAAELQ----NVWVENCANS 93
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ----HFGINT-------KASCSD 205
TF+N + +++ + + L++S HL R++ Q GI + +
Sbjct: 94 TFENFYYGIPILRQWKVHKVTLITSPTHLPRAKWLAQILLGAHGIWVETDIVPEQGIPGN 153
Query: 206 YLNAYYSIIPLSANFYLT 223
Y + + + + ++ +
Sbjct: 154 YESGWKTGLDVTRSLIWA 171
>gi|323142849|ref|ZP_08077561.1| putative protein SanA [Succinatimonas hippei YIT 12066]
gi|322417391|gb|EFY08013.1| putative protein SanA [Succinatimonas hippei YIT 12066]
Length = 247
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 68/187 (36%), Gaps = 17/187 (9%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
KI + + F + ++ + + F+ + K G +LLG + +
Sbjct: 15 RFIKILAYLASIAILVFAMFLLLGILRISSFAFNTYDSYDDVPYNKVG---LLLGTSSNV 71
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
P +P+ +RI LY+ H I++SG D + E L
Sbjct: 72 APG------QPNEYFTNRIMAAANLYR----HKKIDYILVSG-DNRHASYNEPRQMMQAL 120
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
L++GV +D I + T + + + + ++S +H +R+ H GI+
Sbjct: 121 LKAGVPQDRIVADYAGFRTNDSVIRAHKV---FMLNKVTIISQEFHNERALFIANHLGID 177
Query: 199 TKASCSD 205
+
Sbjct: 178 AIGFNAS 184
>gi|307245277|ref|ZP_07527367.1| hypothetical protein appser1_4840 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307258689|ref|ZP_07540423.1| hypothetical protein appser11_4890 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853818|gb|EFM86033.1| hypothetical protein appser1_4840 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306867242|gb|EFM99096.1| hypothetical protein appser11_4890 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 229
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 85/230 (36%), Gaps = 32/230 (13%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
W + +I +S + LF I II +++ + + ++ V+
Sbjct: 15 LWKRCLSTCPRIALVSFAIALFLSITIFIIDYATGIYVKDNIYTDINKLPKHQNA---VV 71
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG P + + R+ ++L K T+++SG + + E
Sbjct: 72 LGTSKFYAKGTPNLYYK------YRLEAAVQLINKGKVK----TLLVSGDNKTPY-YNEP 120
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
V N L + G+ ++ I+ + T + +S + K + I+VS +H +R+
Sbjct: 121 KVMLNDLYKMGIPKNIIEQDFAGYRTLDSIVRASKVYK---LEPFIIVSQQFHCERALFI 177
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY---IGILIAYY 238
++ IN + Y + + L+E+ IG++ +
Sbjct: 178 AKYHNINAVCFAAKYPEGHIKVR------------LREFLARIGMIWDFL 215
>gi|147673100|ref|YP_001216757.1| sanA protein [Vibrio cholerae O395]
gi|146314983|gb|ABQ19522.1| sanA protein [Vibrio cholerae O395]
Length = 221
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 54/154 (35%), Gaps = 19/154 (12%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ Q + V+LG I T+ +RI + LY+ K +
Sbjct: 28 INDAQNTPPFQVAVVLGTSKYIGKTLNEYYT-------NRIDAAIALYQQGKVRN----F 76
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++SG + E LL +G+ ++I L+ T + + + N
Sbjct: 77 LLSGDNA-HRSYNEPWTMKRDLLRAGIPAENISLDYAGFRTLDSIVRAKEIFD---TDNF 132
Query: 177 ILVSSAYHLKRSQLYFQHFGIN----TKASCSDY 206
++++ +H +R+ ++ I S +
Sbjct: 133 LIITQRFHCERALFIARYQDIQASCLAVPGPSSH 166
>gi|238785456|ref|ZP_04629441.1| hypothetical protein yberc0001_16880 [Yersinia bercovieri ATCC
43970]
gi|238713661|gb|EEQ05688.1| hypothetical protein yberc0001_16880 [Yersinia bercovieri ATCC
43970]
Length = 253
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 12/123 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + H E + L+ +GV DI L+
Sbjct: 69 RIQGALNAYNSGKVSY----LLLSGDNA-LHSYNEPMTMRRDLIAAGVPPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ QH GI + S D LN
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIAQHMGIQAQCFAVPSPKDMLNVRV 180
Query: 212 SII 214
I
Sbjct: 181 REI 183
>gi|119483396|ref|ZP_01618810.1| hypothetical protein L8106_05066 [Lyngbya sp. PCC 8106]
gi|119458163|gb|EAW39285.1| hypothetical protein L8106_05066 [Lyngbya sp. PCC 8106]
Length = 239
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 11/96 (11%)
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK 169
S + I+IS G ++ + + LE + TF N FS ++
Sbjct: 72 QSPNTRILISTG-------SDDPCILKLFERNNTPLKQVWLEKCANSTFTNFVFSQPLLS 124
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQ----HFGINTKA 201
+I L++S HL R+ Q GI +
Sbjct: 125 QWNVHHIQLITSKSHLPRALWMAQIILGAHGIWVEP 160
>gi|23502960|ref|NP_699087.1| hypothetical protein BR2112 [Brucella suis 1330]
gi|161620023|ref|YP_001593910.1| hypothetical protein BCAN_A2156 [Brucella canis ATCC 23365]
gi|254705114|ref|ZP_05166942.1| hypothetical protein Bsuib36_14561 [Brucella suis bv. 3 str. 686]
gi|260567417|ref|ZP_05837887.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261755818|ref|ZP_05999527.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|23348996|gb|AAN31002.1| conserved hypothetical protein [Brucella suis 1330]
gi|161336834|gb|ABX63139.1| protein of unknown function DUF218 [Brucella canis ATCC 23365]
gi|260156935|gb|EEW92015.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261745571|gb|EEY33497.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 211
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 51/162 (31%), Gaps = 12/162 (7%)
Query: 76 TTIIPTIPAIRIEPSFQSYS-RIFETMRLYKSCKQHSMHCTIIISGGDPQKHG----LAE 130
I + I SY R+ E + +I +G + +E
Sbjct: 16 HCIYDPLEGADIIIGLGSYDPRVAERAS---DLYLEGLAPWLIFTGRSGRGTDKLYKASE 72
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ + + GV I +E + + +N +FS + I V+ +R
Sbjct: 73 AEAFAEIAIRRGVPERAIIIEPNATNIGENIRFSREKLAWDAVSG-IFVTKPQTQRRVHA 131
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+AS S L ++ + E+ + E IG
Sbjct: 132 TVLRQWPEARASISAPLVSFEE---QPTAEFPLEMLIHEMIG 170
>gi|262165455|ref|ZP_06033192.1| SanA protein [Vibrio mimicus VM223]
gi|262025171|gb|EEY43839.1| SanA protein [Vibrio mimicus VM223]
Length = 253
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 65/203 (32%), Gaps = 22/203 (10%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
+ L C RK+ + ++ I + Q + Q
Sbjct: 14 VAFVAARLSCLPWRKLGQILLLTVIAVVSSLLAIDRWVTWQTQ---NNIISDTQNTPPFQ 70
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+ V+LG I T+ +RI + LY+ K + ++SG +
Sbjct: 71 VAVVLGTSKYIGKTLNEYYT-------NRIDAAIVLYQQGKVRN----FLLSGDNA-HRS 118
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E LL +G+ ++I L+ T + + + N ++++ +H +R
Sbjct: 119 YNEPWTMKRDLLRAGIPTENISLDYAGFRTLDSIVRAKQIFD---TDNFLIITQRFHCER 175
Query: 188 SQLYFQHFGIN----TKASCSDY 206
+ + I S +
Sbjct: 176 ALFIAHYQEIQASCLAVPGPSSH 198
>gi|291531732|emb|CBK97317.1| Uncharacterized conserved protein [Eubacterium siraeum 70/3]
Length = 201
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 54/147 (36%), Gaps = 27/147 (18%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ I + G P P + LY+ + I+ SGG K
Sbjct: 11 DYIFVSG-----EPQKVDAIFLPGGSHPEQPEYAAELYRQ----GLTDWIVPSGGVSVKE 61
Query: 127 G-----LAESIVYN-----------NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+++ +Y+ + L+++GV + I E++S T NA S +
Sbjct: 62 EKWHGVRSKAEIYSGDYRSDCEFFTDVLVKNGVPQTAIIEESKSGHTRDNAFLSRKAVDE 121
Query: 171 MQ--GKNIILVSSAYHLKRSQLYFQHF 195
K+ I+V A+H +R + +Q
Sbjct: 122 KGIMIKSGIIVCKAFHARRCLMLYQMA 148
>gi|318040605|ref|ZP_07972561.1| hypothetical protein SCB01_02820 [Synechococcus sp. CB0101]
Length = 176
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 44/108 (40%), Gaps = 15/108 (13%)
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
+++SGG + Y + L G+++ ++L+ ++ DT N ++
Sbjct: 39 GLPVLVSGGSNPE--------YAHWLFGRRGLDQGRVQLDYRATDTLTNFTSIVEDLRRA 90
Query: 172 QGKNIILVSSAYHLKRSQLY------FQHFGINTKASCSDYLNAYYSI 213
+ ++++LV+S+ H++R+ L + G+
Sbjct: 91 KVRHVLLVTSSDHMQRAMLVGRLVAGSRGIGLTPVEVPCGERCTPEGW 138
>gi|291556712|emb|CBL33829.1| Uncharacterized conserved protein [Eubacterium siraeum V10Sc8a]
Length = 201
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 53/147 (36%), Gaps = 27/147 (18%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ I + G P P + LY+ + I+ SGG K
Sbjct: 11 DYIFVSG-----EPQKVDAIFLPGGSHPEQPEYAAELYRQ----GLTDWIVPSGGVSVKE 61
Query: 127 G-----LAESIVYN-----------NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+++ +Y+ + L+++GV + I E +S T NA S +
Sbjct: 62 EKWHGVRSKAEIYSGDYRSDCEFFTDVLVKNGVPQTAIIEEGKSGHTRDNAFLSRKAVDE 121
Query: 171 MQ--GKNIILVSSAYHLKRSQLYFQHF 195
K+ I+V A+H +R + +Q
Sbjct: 122 KGIMIKSGIIVCKAFHARRCLMLYQMA 148
>gi|153008144|ref|YP_001369359.1| hypothetical protein Oant_0808 [Ochrobactrum anthropi ATCC 49188]
gi|151560032|gb|ABS13530.1| protein of unknown function DUF218 [Ochrobactrum anthropi ATCC
49188]
Length = 212
Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 38/118 (32%), Gaps = 5/118 (4%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHG----LAESIVYNNKLLESGVERDDIKLETQS 154
M ++ +G +E+ + + GV + I +E +
Sbjct: 37 RVAERAADLFLAGMATWLVFTGKSGHWTDRLYKASEAEAFAEIAIRRGVPEEAITIEPNA 96
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
+ +N +FS + + ILV+ +R +AS + L ++
Sbjct: 97 TNIGENIRFSRERLAP-GAISAILVTKPQTQRRVLATAARQWPEARASITAPLVSFED 153
>gi|332187358|ref|ZP_08389096.1| hypothetical protein SUS17_2497 [Sphingomonas sp. S17]
gi|332012519|gb|EGI54586.1| hypothetical protein SUS17_2497 [Sphingomonas sp. S17]
Length = 373
Score = 52.2 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 48/127 (37%), Gaps = 16/127 (12%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
K + I++ G G + + + + + +I+SGG+
Sbjct: 204 KAPYSAIIVPGAGPEDARVALSAWGKLRLALAA----------ARFRAGEAPFVIVSGGN 253
Query: 123 --PQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ---GKNI 176
P + E++ L+E G+ D + LE + T N + ++ ++ M K
Sbjct: 254 VHPDRTPYNEAVEMRRALIERFGIPADRVVLEPYARHTTTNLRNAARLLIAMHAPAAKPA 313
Query: 177 ILVSSAY 183
++V+ +
Sbjct: 314 LIVTDRW 320
>gi|254437770|ref|ZP_05051264.1| hypothetical protein OA307_2640 [Octadecabacter antarcticus 307]
gi|198253216|gb|EDY77530.1| hypothetical protein OA307_2640 [Octadecabacter antarcticus 307]
Length = 99
Score = 52.2 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ LY +++ GG KH +E+ L +GV D + LE S T
Sbjct: 1 MHALTLYNGGHISF----LVLCGGVG-KHPPSETAAMQKILRGAGVRDDAMVLENLSTTT 55
Query: 158 FQNAQFSSSMIKNMQGK 174
+N +F+ ++I +Q +
Sbjct: 56 GENIRFAQTLINEIQRQ 72
>gi|257464563|ref|ZP_05628934.1| SanA protein [Actinobacillus minor 202]
gi|257450223|gb|EEV24266.1| SanA protein [Actinobacillus minor 202]
Length = 237
Score = 51.8 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 84/236 (35%), Gaps = 35/236 (14%)
Query: 5 WIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKK 64
+ L++ W +S K + + +G I +K R
Sbjct: 14 GVLLLIKRWMSCGRSFIKWSVGGFIFFVLTLLGIDFITGYSVK------DRIYTDINKLP 67
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
D + V+LG +P + + ++ S++ + ++ +++SG D Q
Sbjct: 68 DFHTAVVLGTAKFYSKGVPNLYYQYRVEAASQLVKEHQIKH----------LLVSG-DNQ 116
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E V LL+ GV ++ I+ + T + ++ + K I++S +H
Sbjct: 117 TPYYNEPKVMTEDLLKMGVPKNIIQQDFAGYRTLDSVIRANKVFK---LAPFIIISQQFH 173
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY---IGILIAY 237
+R+ + I+ + Y + + ++E+ IG++ Y
Sbjct: 174 CERALFIAKTQNIDAVCLVAKYPEGHVKVR------------IREFFARIGMIWDY 217
>gi|209694809|ref|YP_002262737.1| vancomycin resistance protein SanA [Aliivibrio salmonicida LFI1238]
gi|208008760|emb|CAQ78957.1| vancomycin resistance protein SanA [Aliivibrio salmonicida LFI1238]
Length = 225
Score = 51.8 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 74/208 (35%), Gaps = 25/208 (12%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
+LL S I I+ + L + + Q ++LG T IR
Sbjct: 15 IILLVSGIFVAIVLLMDLYISLSTQSQLYDDIQALPTQETALVLG-------TSKYIRRT 67
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
+ RI + L+K K ++SG + E LL++GV ++I
Sbjct: 68 LNPYYQYRIDAAIELFKQNKVSH----FLLSGDNA-HRSYNEPWTMKRDLLKAGVPEENI 122
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
L+ T + + + +++ +V+ +H +R+ H ++
Sbjct: 123 TLDYAGFRTLDSVLRAKDIFD---VESLTIVTQQFHCQRALFISNHSDMDAV-------- 171
Query: 209 AYYSIIPLSANFYLTELALKEYIGILIA 236
++P + T++ ++E + A
Sbjct: 172 --CLVVPSPTGWANTKIRIREVLARTKA 197
>gi|110805740|ref|YP_689260.1| hypothetical protein SFV_1792 [Shigella flexneri 5 str. 8401]
gi|110615288|gb|ABF03955.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 128
Score = 51.8 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHF-G 196
+ + I +E QS + +NA+FS +++ + I+V +R+ F+ G
Sbjct: 7 FWHIPHEKIWIEDQSTNCGENARFSITLLNQAVERVHTAIVVQDPTMQRRTMATFRRMTG 66
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
N + +Y +P N + + + + G+
Sbjct: 67 DNPD---APRWLSYPGFVPQLGNNADSVIFINQLQGL 100
>gi|300117628|ref|ZP_07055410.1| hypothetical protein BCSJ1_01965 [Bacillus cereus SJ1]
gi|298724961|gb|EFI65621.1| hypothetical protein BCSJ1_01965 [Bacillus cereus SJ1]
Length = 225
Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ ++I + G P P + Y+ + II++GG
Sbjct: 31 PQKCDVIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNQIIVTGGT 69
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+E+ V NKL+E + +D I ET SL + N + + +
Sbjct: 70 SLHGMKHPSWNYGDLSEAEVIVNKLMEHSIPKDAIIFETNSLHSIANVIEAKKIFDFTKV 129
Query: 174 KNIILV 179
++ V
Sbjct: 130 NRLLFV 135
>gi|33866781|ref|NP_898340.1| hypothetical protein SYNW2251 [Synechococcus sp. WH 8102]
gi|33639382|emb|CAE08766.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 191
Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 18/131 (13%)
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
T P ++ R RL + + +++SGG + Y + L+
Sbjct: 33 DTAPPQQVLVLGGDVERERVGARLARQ-----LDKPLLVSGGSNPE--------YASWLV 79
Query: 140 -ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL----YFQH 194
E G+ D ++L+ ++ DT N + + +++++V+SA HL+RS
Sbjct: 80 QEEGLTTDQVQLDYRARDTLSNFTSVVDDLASEGVRHVLVVTSADHLERSLAVGQVVAGS 139
Query: 195 FGINTKASCSD 205
GI+ D
Sbjct: 140 LGIHLTGVPVD 150
>gi|154252045|ref|YP_001412869.1| hypothetical protein Plav_1593 [Parvibaculum lavamentivorans DS-1]
gi|154155995|gb|ABS63212.1| protein of unknown function DUF218 [Parvibaculum lavamentivorans
DS-1]
Length = 208
Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 73/214 (34%), Gaps = 36/214 (16%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ + + + + + L + P+ P + IV L G
Sbjct: 8 RHRTGRRTLRILVGFTALLAAAYVAGFFLFTAELERIPPVRVPV----ADGIVALTGG-- 61
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
RI +L + K + + T + D L E + +
Sbjct: 62 ----------------PDRITAAYKLLQEGKGNRLLITGVHP--DVSVASLKEMVPGGSA 103
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF-- 195
+ V+ + + +T NA ++ ++ ++IILV+S YHL R++L
Sbjct: 104 KFDCCVDLGHM-----AENTIGNATETAEWVRERNYRSIILVTSTYHLPRARLELARAMP 158
Query: 196 GINTKASC----SDYLNAYYSIIPLSANFYLTEL 225
+ A + +L+ +++ P + ++E
Sbjct: 159 DVEISAFPVFQDTLHLDGWWAY-PGTTRLLISEY 191
>gi|297567344|ref|YP_003686316.1| hypothetical protein Mesil_2970 [Meiothermus silvanus DSM 9946]
gi|296851793|gb|ADH64808.1| protein of unknown function DUF218 [Meiothermus silvanus DSM 9946]
Length = 211
Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 16/167 (9%)
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE--SIVYNNKLLE 140
P I P R+ L++ T + G+ E + + + +
Sbjct: 52 PQAAIVPLAGGRERVLYAAALFRQGYGRWFLATDM----PLDAPGIRERYAELVAREAVW 107
Query: 141 SGVERDDIKLETQS-LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL----YFQHF 195
GV R + L + T++ A+ + +++++V+S YH +R++ F
Sbjct: 108 QGVPRSAVVLSDLTVRTTYEEAREILKVAHFRGWRSLLVVTSPYHTRRARWVLSEVFGTS 167
Query: 196 GINTKASCSDYLN-AYYSIIPLSANFYLTELALKEYIGILIAYYRGN 241
GI + + T EY+ L+ G+
Sbjct: 168 GIAVHVVAAPEEGYTPQNWWQSVDGLRNTWT---EYL-KLVLRLLGH 210
>gi|84391224|ref|ZP_00991555.1| sanA protein [Vibrio splendidus 12B01]
gi|84376513|gb|EAP93391.1| sanA protein [Vibrio splendidus 12B01]
Length = 266
Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 76/221 (34%), Gaps = 16/221 (7%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVL 71
+ L ++ +K+ L +G + I + R + + + V+
Sbjct: 8 FRSYLLKAYKKLQGFLFGAFLVFLVGSAAVIAIDYWVSWQAEDRIIYDIDDVPELEVAVV 67
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG + T+ RI + L+ K ++SG + E
Sbjct: 68 LGTSKYLGRTLNDYYKH-------RIEAAIELFDREKVDQ----FLLSGDNA-HRSYNEP 115
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
LL++GV + I L+ T + + + N ++++ +H +R+
Sbjct: 116 WTMKRDLLKAGVPDERINLDYAGFRTLDSIVRAKKIFD---TDNFLIITQKFHCERALFI 172
Query: 192 FQHFGINTK-ASCSDYLNAYYSIIPLSANFYLTELALKEYI 231
+ I+ + + S + + I L F T+ L YI
Sbjct: 173 ANSYDIHAQCLAVSGPTHHSGTSIRLREVFARTKAFLDLYI 213
>gi|183598256|ref|ZP_02959749.1| hypothetical protein PROSTU_01641 [Providencia stuartii ATCC 25827]
gi|188020426|gb|EDU58466.1| hypothetical protein PROSTU_01641 [Providencia stuartii ATCC 25827]
Length = 233
Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 65/183 (35%), Gaps = 23/183 (12%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG------NIIVLLGNGTTIIPTIPA 84
LL+ I I + + L + +P +D ++ ++LG +
Sbjct: 5 LLYGLIAILGIALVTIILL-DRWIAWDTAPDIYEDVADLPIRDVGMVLGTSKYYSSGVQN 63
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ RI Y S K +++SG + H E I L+++GV
Sbjct: 64 LYYS------YRIQGAADAYHSGKVKY----LLLSGDNGA-HSYNEPIAMRKDLIKAGVP 112
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK--AS 202
I L+ T + + + N +++ +H +R+ +H GI+ + A
Sbjct: 113 ASKIVLDFAGFRTLDSVVRTRKVFD---TDNFTIITQRFHCERALFIAKHKGIDAQCLAV 169
Query: 203 CSD 205
+
Sbjct: 170 PTP 172
>gi|196038488|ref|ZP_03105797.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196030896|gb|EDX69494.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
Length = 225
Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ ++I + G P P + Y+ + II++GG
Sbjct: 31 PQKCDVIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNQIIVTGGT 69
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+E+ V NKL+E GV +D I ET SL + N + + +
Sbjct: 70 SLHGMKHPSWNYGDLSEAEVIVNKLMEHGVPKDAILFETNSLHSIANVMEAKKIFDFTKV 129
Query: 174 KNIILV 179
++ V
Sbjct: 130 NRLLFV 135
>gi|228916120|ref|ZP_04079690.1| hypothetical protein bthur0012_33360 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228843318|gb|EEM88396.1| hypothetical protein bthur0012_33360 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 225
Score = 51.8 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ + I + G P P + Y+ + II++GG
Sbjct: 31 PQKCDAIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNRIIVTGGT 69
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+E+ V NKL+E GV +D I ET SL + N + + +
Sbjct: 70 SLHGMKHPSWNYGDLSEAEVIVNKLMEHGVPKDAIMFETNSLHSIANVMEAKKIFDFTKV 129
Query: 174 KNIILV 179
++ V
Sbjct: 130 NRLLFV 135
>gi|144898927|emb|CAM75791.1| Protein of unknown function DUF218 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 202
Score = 51.8 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/229 (15%), Positives = 82/229 (35%), Gaps = 40/229 (17%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+ + R++ + ++ + + G L F + P + IV+L
Sbjct: 1 MRSRHPRRVHRLGAVLVALAALWSG-------GFLWFVDEVPRAVDDQTSHTDAIVVLTG 53
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G R+ + L ++ + + ISG G+ + +
Sbjct: 54 GR------------------ERLTTGLDLLEA----GLSQRLFISG---VYKGVDLAEII 88
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+G+ ++ + L + DT NA ++ +++ +V+ AYH+ R+ F+H
Sbjct: 89 QLGRGHAGL-KEAVVLGYAADDTVGNAIETALWATEHNLRSLRIVTGAYHMPRALAEFRH 147
Query: 195 F----GINTKASCSDYLNAYYSI-IPLSANFYLTELALKEYIGILIAYY 238
+ D + + P +A TE + +Y+ +I ++
Sbjct: 148 ALPEITLIAHPVFPDQVKSREWWRWPGTAALLATEYS--KYLAAIIRHW 194
>gi|225865467|ref|YP_002750845.1| hypothetical protein BCA_3578 [Bacillus cereus 03BB102]
gi|229185722|ref|ZP_04312900.1| hypothetical protein bcere0004_32730 [Bacillus cereus BGSC 6E1]
gi|225786481|gb|ACO26698.1| conserved domain protein [Bacillus cereus 03BB102]
gi|228597809|gb|EEK55451.1| hypothetical protein bcere0004_32730 [Bacillus cereus BGSC 6E1]
Length = 225
Score = 51.8 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 43/126 (34%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ + I + G P P + Y+ + II++GG
Sbjct: 31 PQKCDAIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNRIIVTGGT 69
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+E+ V NKL+E GV D I ET SL + N + + +
Sbjct: 70 SLHGMKHPSWNYGDLSEAEVIVNKLMEHGVPTDAILFETNSLHSIANVMEAKKIFDFTKV 129
Query: 174 KNIILV 179
++ V
Sbjct: 130 NRLLFV 135
>gi|301163592|emb|CBW23143.1| putative transport-related membrane protein [Bacteroides fragilis
638R]
Length = 212
Score = 51.8 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 50/139 (35%), Gaps = 18/139 (12%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K I++SG D +++ E L+ +G+ I L+ L
Sbjct: 69 RIKAATELYNAGKVKY----ILVSG-DNRRNSYNEPEEMKKALIAAGIPDQRIILDYAGL 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T + + + + L+S +H +R+ Q + + ++AY
Sbjct: 124 RTLDSV--VRAHL-IFGLERFTLISQQFHNERAIYLAQQSHLQAIGYSAQDVSAYAGFKT 180
Query: 216 LSANFYLTELALKEYIGIL 234
L+E + +
Sbjct: 181 N----------LRELLARV 189
>gi|291618091|ref|YP_003520833.1| SanA [Pantoea ananatis LMG 20103]
gi|291153121|gb|ADD77705.1| SanA [Pantoea ananatis LMG 20103]
Length = 252
Score = 51.8 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 68/200 (34%), Gaps = 19/200 (9%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQF---SYQRPLLSPQWKKDGNIIVLLG 73
+ +R++ LLF + L + + + Y L+ + V+LG
Sbjct: 8 SRVLRRMLKRVFIALLFIILTMVATALGLDRWISWKTAPYIYDNLASLPHRQVG--VVLG 65
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
+ R+ + Y S K + +++SG + Q E +
Sbjct: 66 TAKYYRTGVINQYY------LYRMQGALNAYNSGKVNY----LLLSGDNAQ-QSYNEPMT 114
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L++ GV+ DI L+ T + + + + I+++ +H +R+
Sbjct: 115 MRRDLIKGGVDPADIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIAL 171
Query: 194 HFGINTKASCSDYLNAYYSI 213
H GI + S+
Sbjct: 172 HLGIQAQCYAVPSPKNMLSV 191
>gi|149191683|ref|ZP_01869925.1| hypothetical protein VSAK1_14677 [Vibrio shilonii AK1]
gi|148834472|gb|EDL51467.1| hypothetical protein VSAK1_14677 [Vibrio shilonii AK1]
Length = 289
Score = 51.8 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 47/130 (36%), Gaps = 21/130 (16%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
IV+LG + + SR+ E +R I GG +
Sbjct: 10 IVVLG--------KRLNNNALTLEGMSRVEEILR--HVGSSDCSSSIIAFCGGVTNGQSV 59
Query: 129 AESIVYNNKLLE--SGVERDDI---KLETQSLDTFQNA------QFSSSMIKNMQGKNII 177
+E+ + S ++ +I LE +S T +N S +++N +
Sbjct: 60 SEARLMFEAFEAGLSSMDNSNIGAVLLEEESTSTVENIIHLSEVLLESELLQNGAKIEVK 119
Query: 178 LVSSAYHLKR 187
VS+ YHL+R
Sbjct: 120 FVSNDYHLER 129
>gi|329889066|ref|ZP_08267409.1| hypothetical protein BDIM_07380 [Brevundimonas diminuta ATCC 11568]
gi|328844367|gb|EGF93931.1| hypothetical protein BDIM_07380 [Brevundimonas diminuta ATCC 11568]
Length = 304
Score = 51.8 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 9/98 (9%)
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG--DPQKHGLAESIVYNNKLLESG-VE 144
+ + RI + Y++ + II+SGG P E++ L+ +
Sbjct: 157 PLNPAAKLRIRRGVEHYRAGQ----APVIIVSGGTLRPAGTPYNEALEMKRFLVSHHGIP 212
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII--LVS 180
D I ++ + T N + ++ +I M + LV+
Sbjct: 213 ADHILIDPVARHTTSNMRNAARLIFVMGAPREMKSLVT 250
>gi|329890874|ref|ZP_08269217.1| hypothetical protein BDIM_25830 [Brevundimonas diminuta ATCC 11568]
gi|328846175|gb|EGF95739.1| hypothetical protein BDIM_25830 [Brevundimonas diminuta ATCC 11568]
Length = 218
Score = 51.4 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 61/184 (33%), Gaps = 39/184 (21%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
F+ L + + + + + + P P + IV L
Sbjct: 3 FLTLIAVVALMWLTGLFVFAERVRGFTPAPDP---ARADAIVSL---------------- 43
Query: 89 PSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI 148
+ S R+ +RL + K ++ISG V +L +
Sbjct: 44 -TGPSAERVNAAIRLLEQGK----GDRLLISG--------VNREVRRQELRALTPGSSKL 90
Query: 149 K-----LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKA 201
L ++ +T NAQ ++ ++ ++I+V+S YH+ RS L + G+
Sbjct: 91 FNCCVDLGFEAENTVGNAQEIAAWARSKGYDDLIVVTSDYHMPRSLLEIRGAAPGVRLTP 150
Query: 202 SCSD 205
Sbjct: 151 YAVS 154
>gi|296283193|ref|ZP_06861191.1| hypothetical protein CbatJ_06211 [Citromicrobium bathyomarinum
JL354]
Length = 176
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 58/176 (32%), Gaps = 49/176 (27%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+ ++L +G+ L P + + +++ PT A
Sbjct: 5 VGLAIVLVWVLGFIWFAGWL------------PGPAPMERTDAVIV--------PTGYAG 44
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
RIE + Q T++++G DP+ + V
Sbjct: 45 RIERGLEVV--------------QTDSADTLLVTGVDPEVKP-------GEFAAQFKVPE 83
Query: 146 DDIKLET------QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
D +E + DT NAQ + + K++ LV+S +H++R+ +
Sbjct: 84 D--VMECCVTLGFAATDTRGNAQETREWAEAHGIKSLRLVTSDWHMRRAATELRRQ 137
>gi|319953636|ref|YP_004164903.1| hypothetical protein Celal_2110 [Cellulophaga algicola DSM 14237]
gi|319422296|gb|ADV49405.1| protein of unknown function DUF218 [Cellulophaga algicola DSM
14237]
Length = 211
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/220 (15%), Positives = 69/220 (31%), Gaps = 31/220 (14%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGN 74
+L + ++ I + FI II + +Y P +
Sbjct: 1 MLKKILKVIAACTVLFFALLFICNYIIDA---STEEQTYTSVEKIPANRV---------- 47
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + P+ +RI T+ LYK+ K +++SG + + E
Sbjct: 48 GLILGTAKRLTSGHPNPYYTNRIIATVALYKASKIEF----VLVSGDNGSIY-YNEPKAI 102
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L++ G+ D I L+ T + + + ++ ++S +H R+
Sbjct: 103 KKDLVKGGIPEDKIFLDYAGFRTLDSMMRAKHV---FGLTSVTVISQEFHNDRAIYLAHK 159
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
G+ + + L+EY +
Sbjct: 160 KGLKAIGFNAKDITGTNGFKVQ----------LREYFARV 189
>gi|225619978|ref|YP_002721235.1| hypothetical protein BHWA1_01048 [Brachyspira hyodysenteriae WA1]
gi|225214797|gb|ACN83531.1| hypothetical protein BHWA1_01048 [Brachyspira hyodysenteriae WA1]
Length = 273
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 82/215 (38%), Gaps = 25/215 (11%)
Query: 24 FFMSCFMLLFSFIG----WGIIPTILLKHLQFSYQRPLL--SPQWKKDGNIIVLLGNGTT 77
+ + F+ LF+F+ +I ++L Y + + S + ++ ++LG
Sbjct: 38 YILLIFISLFTFLPEIIILSLISAVILYSSVSLYSKRYIYSSIEEIPYNDVALVLG---- 93
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ + + R+ LYKS K I++SG D + E
Sbjct: 94 --TSKYLHNGQVNMYFQFRMEAAYELYKSGKVKY----ILVSG-DNRYKSYNEPRQMRLD 146
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L++ GV + I L+ T + ++ + + N +VS +H +R+ L + I
Sbjct: 147 LIKLGVNKKHIFLDFAGFRTRDSIIRANKVFE---LTNFTIVSQPFHNERAILIARQKNI 203
Query: 198 NTKASCSDYLNAYYSI--IPL---SANFYLTELAL 227
N A ++ + Y + P + ++ L
Sbjct: 204 NAIAYNANNVRKLYRVRQFPRELGARALMFVDILL 238
>gi|16126457|ref|NP_421021.1| hypothetical protein CC_2218 [Caulobacter crescentus CB15]
gi|221235238|ref|YP_002517674.1| hypothetical protein CCNA_02301 [Caulobacter crescentus NA1000]
gi|13423723|gb|AAK24189.1| hypothetical protein CC_2218 [Caulobacter crescentus CB15]
gi|220964410|gb|ACL95766.1| hypothetical protein CCNA_02301 [Caulobacter crescentus NA1000]
Length = 205
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 56/141 (39%), Gaps = 18/141 (12%)
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P I + + S R+ RL + K ++ISG E+ + +
Sbjct: 34 PPISDGVVALTGASTLRLEAATRLLEDGKGQ----RLLISG------VNREATRAEIQAV 83
Query: 140 ESGVER---DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF- 195
V+ + L + +T NA+ ++ ++ K++I+V++ YH+ RS L +
Sbjct: 84 TKAVKPIYDCCVDLGFAAANTVGNARETAEWARSKGYKSLIVVTADYHMPRSMLELRAAM 143
Query: 196 ---GINTKASCSDYLNAYYSI 213
++ +D LNA
Sbjct: 144 PNVVLHPYPVKTD-LNARRWW 163
>gi|281601205|gb|ADA74189.1| hypothetical protein SFxv_2015 [Shigella flexneri 2002017]
gi|313650552|gb|EFS14956.1| hypothetical protein SF2457T_0983 [Shigella flexneri 2a str. 2457T]
gi|332755868|gb|EGJ86224.1| hypothetical protein SF434370_2248 [Shigella flexneri 4343-70]
gi|332761469|gb|EGJ91751.1| hypothetical protein SF274771_0592 [Shigella flexneri 2747-71]
gi|332767645|gb|EGJ97838.1| hypothetical protein SF293071_1299 [Shigella flexneri 2930-71]
gi|333004477|gb|EGK24007.1| hypothetical protein SFVA6_2229 [Shigella flexneri VA-6]
gi|333004730|gb|EGK24252.1| hypothetical protein SFK218_2178 [Shigella flexneri K-218]
gi|333017697|gb|EGK37009.1| hypothetical protein SFK304_2449 [Shigella flexneri K-304]
Length = 164
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHF-G 196
+ + I +E QS + +NA+FS +++ + I+V +R+ F+ G
Sbjct: 7 FWHIPHEKIWIEDQSTNCGENARFSITLLNQAVERVHTAIVVQDPTMQRRTMATFRRMTG 66
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
N A +Y +P N + + + + G+
Sbjct: 67 DNPDA---PRWLSYPGFVPQLGNNADSVIFINQLQGL 100
>gi|284030101|ref|YP_003380032.1| hypothetical protein Kfla_2151 [Kribbella flavida DSM 17836]
gi|283809394|gb|ADB31233.1| protein of unknown function DUF218 [Kribbella flavida DSM 17836]
Length = 246
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 18/107 (16%)
Query: 106 SCKQHSMHCTIIISGGDP-----------------QKHGLAESIVYNNKLLESGVERDDI 148
I++SGG ES ++ + L GV+ +
Sbjct: 45 QAYHRGAAARILVSGGLGHSTHHLVHAVERRGLPIPAGHRPESHIFRDLLHRYGVDPAAV 104
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQ-GKNIILVSSAYHLKRSQLYFQH 194
+E S + +NA F+ ++ + ++LV +R+ F+
Sbjct: 105 TVEDDSTNCGENAAFTRRLLDHDSTAYRLVLVQDPTMQRRTHAAFER 151
>gi|261210655|ref|ZP_05924947.1| SanA protein [Vibrio sp. RC341]
gi|260840140|gb|EEX66720.1| SanA protein [Vibrio sp. RC341]
Length = 217
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 52/154 (33%), Gaps = 19/154 (12%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+ + V+LG I T+ +RI + LY+ K +
Sbjct: 26 INDTDNTPPFQVAVVLGTSKYIGKTLNEYYT-------NRIDAAIELYQQGKVRN----F 74
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++SG + E LL +GV ++I L+ T + + + N
Sbjct: 75 LLSGDNA-HRSYNEPWTMKRDLLRAGVPAENISLDYAGFRTLDSIVRAKQIFD---TNNF 130
Query: 177 ILVSSAYHLKRSQLYFQHFGIN----TKASCSDY 206
++++ +H +R+ + I S +
Sbjct: 131 LIITQRFHCERALFIAHYQDIQASCLAVPGPSSH 164
>gi|309785402|ref|ZP_07680033.1| sanA [Shigella dysenteriae 1617]
gi|308926522|gb|EFP71998.1| sanA [Shigella dysenteriae 1617]
Length = 147
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K +++SG + +K+ E+ L+ GV I +
Sbjct: 49 RIDTAAALYHAGKVKW----LLVSGDNGRKN-YDEASGMQQALIAKGVPAKVIFCDYAGF 103
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
T + + + +I ++S +H +R+ + +GI
Sbjct: 104 STLDSVVRAKKVFGEN---HITIISQEFHNQRAIWLAKQYGI 142
>gi|332709823|ref|ZP_08429780.1| hypothetical protein LYNGBM3L_44370 [Lyngbya majuscula 3L]
gi|332351421|gb|EGJ31004.1| hypothetical protein LYNGBM3L_44370 [Lyngbya majuscula 3L]
Length = 198
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 13/110 (11%)
Query: 102 RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNA 161
R I +S G P+ + G+E + L+ +++DT N
Sbjct: 58 RYAAKFAIKHPDLNIWVSSGSPKGY-------AKRLFTREGIEVSRLHLDYKAVDTVTNF 110
Query: 162 QFSSSMIKNMQGKNIILVSSAYHLKRSQLY------FQHFGINTKASCSD 205
++ ++ L++S YH++R++L + + S
Sbjct: 111 TTLVDQLEAQDIDSVYLITSDYHMRRARLIGDIVLGSRGIVLKPLPVPSG 160
>gi|284037116|ref|YP_003387046.1| hypothetical protein Slin_2226 [Spirosoma linguale DSM 74]
gi|283816409|gb|ADB38247.1| protein of unknown function DUF218 [Spirosoma linguale DSM 74]
Length = 222
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 72/214 (33%), Gaps = 24/214 (11%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+R + + + FIG ++ + + + ++ ++LG
Sbjct: 8 VRAVKRVIKLTIALVFIGATVVLVSNWWVVYNTRNQIYFDIHELPANDVGLVLG------ 61
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ + + R+ T RL+K K +I+SG + E + L+
Sbjct: 62 TSKFVRTGKENLFFRYRMEATARLWKEGKVKY----LILSGNN-DSEYYNEPVDMQRALV 116
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ G+ + L+ TF + + + I ++S +H R+ H GI
Sbjct: 117 KLGIPASVMTLDYAGYRTFDSVVRCKDVFNQ---EKITIISQNFHNARALYIGNHEGIEA 173
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
A + + YS ++EY+
Sbjct: 174 IAFAAQDVPDGYSF----------RTLIREYLAR 197
>gi|315500246|ref|YP_004089049.1| hypothetical protein Astex_3264 [Asticcacaulis excentricus CB 48]
gi|315418258|gb|ADU14898.1| protein of unknown function DUF218 [Asticcacaulis excentricus CB
48]
Length = 214
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 67/201 (33%), Gaps = 46/201 (22%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ ++ G ++ + + ++ + IV+L
Sbjct: 2 RRLLAVVLVIGLWLAGLYAFADRVIHS--------TPAAEPEEAADAIVVL--------- 44
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG-----GDPQKHGLAESIVYNN 136
+ S RI E MRL + K ++ISG + + E +
Sbjct: 45 --------TGASDMRIKEGMRLLERRK----GARMLISGVNREVKREELLPVTEG---SK 89
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF- 195
KL E V+ L ++ T NA + K ++I+V+S YH+ RS L +
Sbjct: 90 KLYECCVD-----LGYEAQTTLGNAYEVAEWAKAKGFDDLIVVTSDYHVPRSLLEIKAAL 144
Query: 196 ---GINTKASCSDYLNAYYSI 213
++ + L+A
Sbjct: 145 PGVKLHAYPVATPTLDAREWW 165
>gi|213581373|ref|ZP_03363199.1| hypothetical protein SentesTyph_09270 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 154
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 27/107 (25%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTTGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSS 181
+ + + I LE +S + +NA+FS ++I+ + I+V
Sbjct: 106 ANQFWHIPAEKIWLEDRSTNCGENARFSCALIRQAKENINTAIVVQD 152
>gi|60682122|ref|YP_212266.1| putative transport-related membrane protein [Bacteroides fragilis
NCTC 9343]
gi|253567093|ref|ZP_04844544.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265764260|ref|ZP_06092828.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|60493556|emb|CAH08343.1| putative transport-related membrane protein [Bacteroides fragilis
NCTC 9343]
gi|251944217|gb|EES84726.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263256868|gb|EEZ28214.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 212
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 50/139 (35%), Gaps = 18/139 (12%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K I++SG D +++ E L+ +G+ I L+ L
Sbjct: 69 RIKAATELYNAGKVKY----ILVSG-DNRRNSYNEPEEMKKALIAAGIPDQRIILDYAGL 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T + + + + L+S +H +R+ Q + + ++AY
Sbjct: 124 RTLDSV--VRAHL-IFGLERFTLISQQFHNERAIYLAQQSHLQAIGYNAQDVSAYAGFKT 180
Query: 216 LSANFYLTELALKEYIGIL 234
L+E + +
Sbjct: 181 N----------LRELLARV 189
>gi|270261051|ref|ZP_06189324.1| vancomycin sensitivity [Serratia odorifera 4Rx13]
gi|270044535|gb|EFA17626.1| vancomycin sensitivity [Serratia odorifera 4Rx13]
Length = 247
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 65/199 (32%), Gaps = 20/199 (10%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ K +S F+++ + + + Y L + V+LG
Sbjct: 1 MWKRLIISLFIIIAVLMLSALALDRWISWKTAPYVYDELQGLPHRQVG--VVLGTAKYYR 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K +++SG + Q E + L+
Sbjct: 59 TGVINQYYR------YRIQGAINAYNSGKVKY----LLLSGDNAQ-QSYNEPMTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+GV DI L+ T + + + + I+++ +H +R+ H GI
Sbjct: 108 AAGVAPSDIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQA 164
Query: 200 K----ASCSDYLNAYYSII 214
+ S D + I
Sbjct: 165 QCYAVPSPKDMMTVRAREI 183
>gi|254424039|ref|ZP_05037757.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196191528|gb|EDX86492.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 357
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 85/243 (34%), Gaps = 39/243 (16%)
Query: 36 IGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP-----AIRIE 88
+ LL + Q + +L + IV+ G+ I I A
Sbjct: 101 FSSTPLSAGLLVNRSEQSTRAADILGTRNLATAVAIVVFGDRNDINRAISPTSDMAASYA 160
Query: 89 PSFQSYS-RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD 147
P++ + + RI LY ++ ++++ G + +I+ L ++G+ D
Sbjct: 161 PAYTALAPRITYAADLYAEARRRGAAPMVMVTAGSVAEDTNQRAII-REMLADNGIASRD 219
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQ----------------GKNIILVSSAYHLKRSQLY 191
I + + LD A+ +++ + ++LV+ A + R++L
Sbjct: 220 ILIRSTGLDVRGTAEAVEGFLESQRLIARREQRLEPDAIRDVPWVVLVAPAIIMSRAELT 279
Query: 192 FQHFGINTKASCSDY--------------LNAYYSIIPLSANFYLTELALKEYIGILIAY 237
F+ G+ T + + N ++IP LT E + L +
Sbjct: 280 FEQIGLRTIPRPTSFSTLSVDTDGPSDQIANMLLNLIPSVDTLRLTSEYWDERLTYLYYF 339
Query: 238 YRG 240
RG
Sbjct: 340 ARG 342
>gi|269102596|ref|ZP_06155293.1| putative SanA protein [Photobacterium damselae subsp. damselae CIP
102761]
gi|268162494|gb|EEZ40990.1| putative SanA protein [Photobacterium damselae subsp. damselae CIP
102761]
Length = 224
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/215 (15%), Positives = 76/215 (35%), Gaps = 27/215 (12%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+ F + +L F+G ++ + S + ++ ++LG I T
Sbjct: 4 RNIFPAFAVLCIIFVGSLLLVNR-WVSAETS-NQIYRDISQIPSRSVGLVLGTSKYIAKT 61
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ RI + LYK K + ++SG D + E LL++
Sbjct: 62 LNPYYEY-------RIQAALELYKQDKIN----VFLLSG-DNRHRSYNEPWTMKRDLLKA 109
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV ++I L+ T + + + + + ++++ +H +R+ Q+ I+
Sbjct: 110 GVPDNEIVLDYAGFRTLDSIVRAKKVFEAN---HFVIITQKFHCERALFIAQNKNIDAIC 166
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
P +L ++E + + A
Sbjct: 167 LAV----------PEPKGMAGLKLRIREVLARVKA 191
>gi|149277868|ref|ZP_01884008.1| hypothetical protein PBAL39_18714 [Pedobacter sp. BAL39]
gi|149231556|gb|EDM36935.1| hypothetical protein PBAL39_18714 [Pedobacter sp. BAL39]
Length = 417
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 13/109 (11%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ +I++ G G P P + + R+ Y+ + + I++SGG
Sbjct: 249 QYQYTLILVPGEG----PEEPEVALSAGGMLRCRL--AAMQYR----NGVAPFIMVSGGC 298
Query: 122 -DPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMI 168
P K E++ L+E + I +E + T N + + +I
Sbjct: 299 VHPFKTKYNEAVEMKKFLMENLQIPERAILMEPHARHTTTNLRNCARLI 347
>gi|53713914|ref|YP_099906.1| hypothetical protein BF2622 [Bacteroides fragilis YCH46]
gi|52216779|dbj|BAD49372.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 212
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 50/139 (35%), Gaps = 18/139 (12%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K I++SG D +++ E L+ +G+ I L+ L
Sbjct: 69 RIKAATELYNAGKVKY----ILVSG-DNRRNSYNEPEEMKKALIAAGIPDQRIILDYAGL 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T + + + + L+S +H +R+ Q + + ++AY
Sbjct: 124 RTLDSV--VRAHL-IFGLERFTLISQQFHNERAIYLAQQSHLQAIGYNAQDVSAYAGFKT 180
Query: 216 LSANFYLTELALKEYIGIL 234
L+E + +
Sbjct: 181 N----------LRELLARV 189
>gi|146341936|ref|YP_001206984.1| hypothetical protein BRADO5071 [Bradyrhizobium sp. ORS278]
gi|146194742|emb|CAL78767.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 195
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Query: 80 PTIPAIRIEPSFQSYSRIFE--TMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
P R + F +R+ E Q I+SGG L+E +
Sbjct: 23 ADTPLRRADLLFVFGTRVDEELRAETAAGLWQQGYFRHAIVSGGVTPGAVLSECALIKAA 82
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
++ G+ + I E ++++T +N F+ +I G
Sbjct: 83 MVRRGIPAERILEEHRAMNTGENVLFALPVIDAALG 118
>gi|206580552|ref|YP_002238787.1| hypothetical protein KPK_2961 [Klebsiella pneumoniae 342]
gi|206569610|gb|ACI11386.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
Length = 266
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 54/162 (33%), Gaps = 46/162 (28%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+++VL GN + P+ + R+ ++ISGG
Sbjct: 35 PQVDVVVLAGN-----------AVIPTIDAACRLAA-----------EREVPLLISGGVG 72
Query: 124 QKH-------------------GLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQF 163
G E+ + + + + R + +E QS + +NA+F
Sbjct: 73 HSTNYLYEAVRQDTRYRMLPVVGRPEAHILADIAHDYWQIPRSRLVVEDQSTNCGENARF 132
Query: 164 SSSMIKNMQG--KNIILVSSAYHLKRSQLYFQH--FGINTKA 201
+ + ++N + I++ +R+ F G+ T
Sbjct: 133 TRTTLENGGIPHRRGIVIQDPTMQRRTMATFARVWQGVTTPP 174
>gi|78357887|ref|YP_389336.1| hypothetical protein Dde_2846 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220292|gb|ABB39641.1| hypothetical protein Dde_2846 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 280
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 78/218 (35%), Gaps = 21/218 (9%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
+ + R + + F+ + + L + P + +++V
Sbjct: 58 GRVRHISRRQRTLHAVKTFLAVAGAAAILLCVLGAGGLLWIAGNATTEYPP--RKADVMV 115
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG G R + Y+R + + +Y S + ++ E
Sbjct: 116 VLGGGLH--------RAMFAADLYNRGYAPV-VYVSRTRPRREAGVM---KQHGYRMPDE 163
Query: 131 SIVYNNKLLESGVERDDIKLETQSL-DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
+Y L + GV DI++ L T A+ + ++ + + +++V++ H R+
Sbjct: 164 PEMYVRILTDKGVPMRDIRMYGYDLISTVGEAEALAGILGDRKL-TVLVVTAPVHAPRAG 222
Query: 190 LYFQHF----GINTKASCSD-YLNAYYSIIPLSANFYL 222
+ F+H I T S D + +++ + N L
Sbjct: 223 MVFRHALPRCSILTAGSPYDPFPQRWWNDQDAARNLLL 260
>gi|255009581|ref|ZP_05281707.1| putative transport-related membrane protein [Bacteroides fragilis
3_1_12]
gi|313147358|ref|ZP_07809551.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313136125|gb|EFR53485.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 212
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 50/139 (35%), Gaps = 18/139 (12%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI LY + K I++SG D +++ E L+ +G+ I L+ L
Sbjct: 69 RIKAATELYNAGKIKY----ILVSG-DNRRNDYNEPEEMKQALIATGIPEQQIILDYAGL 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T + + + + L+S +H +R+ Q + + ++AY
Sbjct: 124 RTLDSVIRAHLI---FGLERFTLISQEFHNERAIFLAQQNHLQVIGYNAQDVSAYAGFKT 180
Query: 216 LSANFYLTELALKEYIGIL 234
L+E + +
Sbjct: 181 N----------LRELLARV 189
>gi|87301819|ref|ZP_01084653.1| hypothetical protein WH5701_00800 [Synechococcus sp. WH 5701]
gi|87283387|gb|EAQ75342.1| hypothetical protein WH5701_00800 [Synechococcus sp. WH 5701]
Length = 194
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 51/145 (35%), Gaps = 18/145 (12%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
++++G G + I R RL H +++SGG +
Sbjct: 11 AGALIVVGRGLLLPSLGHPQLILVLGGDIEREKLAGRLA-----HRDGLPLLVSGGSNPE 65
Query: 126 HGLAESIVYNNKLLESG-VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
Y L ++R +L+ ++ DT N +K + +++LV+S+ H
Sbjct: 66 --------YAQWLFSQEGLDRRQFRLDYRARDTLGNFTTVVDDLKRLGIHHVLLVTSSDH 117
Query: 185 LKRSQL----YFQHFGINTKASCSD 205
+ R+ L GI+
Sbjct: 118 MDRALLVGRIVAGSRGIHLTPVAVP 142
>gi|290509744|ref|ZP_06549115.1| ydcF [Klebsiella sp. 1_1_55]
gi|289779138|gb|EFD87135.1| ydcF [Klebsiella sp. 1_1_55]
Length = 266
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 54/162 (33%), Gaps = 46/162 (28%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+++VL GN + P+ + R+ ++ISGG
Sbjct: 35 PQVDVVVLAGN-----------AVIPTIDAACRLAA-----------EREVPLLISGGVG 72
Query: 124 QKH-------------------GLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQF 163
G E+ + + + + R + +E QS + +NA+F
Sbjct: 73 HSTNYLYEAVRQDTRYRMLPVVGRPEAHILADIAHDYWHIPRSRLVVEDQSTNCGENARF 132
Query: 164 SSSMIKNMQG--KNIILVSSAYHLKRSQLYFQH--FGINTKA 201
+ + ++N + I++ +R+ F G+ T
Sbjct: 133 TRTTLENGGIPHRRGIVIQDPTMQRRTMATFARVWQGVATPP 174
>gi|261253221|ref|ZP_05945794.1| SanA protein [Vibrio orientalis CIP 102891]
gi|260936612|gb|EEX92601.1| SanA protein [Vibrio orientalis CIP 102891]
Length = 253
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 61/198 (30%), Gaps = 23/198 (11%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
W Q + ++ F L+ + I + Q + + ++ V+L
Sbjct: 12 WLNWTQVTKVARWLPVFALILA-ASLFAIDRWVSYQAQKQLFTQV---EQIDKFDVAVVL 67
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G + + R+ + LY K ++SG + E
Sbjct: 68 GTSKYLGKILNEYYSH-------RMDAAIELYNEGKVAH----FLLSGDNA-HRSYNEPW 115
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
LL + V + I L+ T + + + N +++S +H +R+
Sbjct: 116 TMKRDLLRAEVPEEKIFLDYAGFRTLDSVVRAKEIFD---TDNFLIISQKFHCERALFIA 172
Query: 193 QHFGIN----TKASCSDY 206
+ IN S +
Sbjct: 173 KSHNINASCFAVPGPSRH 190
>gi|124006301|ref|ZP_01691136.1| SanA protein [Microscilla marina ATCC 23134]
gi|123988225|gb|EAY27883.1| SanA protein [Microscilla marina ATCC 23134]
Length = 218
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + LYK+ K I++SG + + E +N L+ SGV + I L+
Sbjct: 74 RIEAAVALYKAKKIKY----ILVSGDNRFDY-YNEPREMHNALVASGVPSEVIVLDYAGF 128
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + S + + I ++S +H KR+ ++G+ A + +N Y
Sbjct: 129 RTLDSVVRSKKV---FGQQAITIISQPFHNKRALFIASNYGMKAVAFNAKDVNLYMGF 183
>gi|315181463|gb|ADT88376.1| hypothetical protein vfu_B00124 [Vibrio furnissii NCTC 11218]
Length = 285
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 46/131 (35%), Gaps = 22/131 (16%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
I++LG + + + + SR+ + + H I GG +
Sbjct: 6 ILVLG--------KRLVNNQLTAEGESRVQ--ALVAWLAAKQFAHPIIGFCGGCTDGQQV 55
Query: 129 AESIVYNNKLLES------GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG------KNI 176
+E+ ++ + LE S +T +N + + ++ ++
Sbjct: 56 SEASAMAEAFIQQSQKFGLNPNEMTLVLEQASTNTIENIECMAQTLREQGIFAAGSEIDV 115
Query: 177 ILVSSAYHLKR 187
I S+ YHLKR
Sbjct: 116 IFASNDYHLKR 126
>gi|260770396|ref|ZP_05879329.1| hypothetical protein VFA_003463 [Vibrio furnissii CIP 102972]
gi|260615734|gb|EEX40920.1| hypothetical protein VFA_003463 [Vibrio furnissii CIP 102972]
Length = 285
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 22/131 (16%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
I++LG + + + + SR+ + + + I GG +
Sbjct: 6 ILVLG--------KRLVNNQLTAEGESRVQALVAWLAAKQFAQPI--IGFCGGCTDGQQV 55
Query: 129 AESIVYNNKLLES------GVERDDIKLETQSLDTFQNAQFSSSMIKNMQG------KNI 176
+E+ ++ + LE S +T +N + + ++ ++
Sbjct: 56 SEASAMAEAFIQQSQKHGLNPNEMTLVLEQASTNTIENIECMAQTLREQGIFAAGSEIDV 115
Query: 177 ILVSSAYHLKR 187
I S+ YHLKR
Sbjct: 116 IFASNDYHLKR 126
>gi|254718153|ref|ZP_05179964.1| hypothetical protein Bru83_01156 [Brucella sp. 83/13]
gi|265983109|ref|ZP_06095844.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306837667|ref|ZP_07470536.1| Hypothetical protein BROD_0471 [Brucella sp. NF 2653]
gi|264661701|gb|EEZ31962.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306407225|gb|EFM63435.1| Hypothetical protein BROD_0471 [Brucella sp. NF 2653]
Length = 211
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 9/110 (8%)
Query: 76 TTIIPTIPAIRIEPSFQSYS-RIFETMRLYKSCKQHSMHCTIIISGGDPQKHG----LAE 130
I + I SY R+ E + +I +G + +E
Sbjct: 16 HCIYDPLEGADIIIGLGSYDPRVAERAS---DLYLEGLAPWLIFTGRSGRGTDKLYKASE 72
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ + + GV I +E + + +N +FS + I V+
Sbjct: 73 AEAFAEIAIRRGVPERAIIIEPNATNIGENIRFSREKLAWDAVSG-IFVT 121
>gi|259908016|ref|YP_002648372.1| hypothetical protein EpC_13560 [Erwinia pyrifoliae Ep1/96]
gi|224963638|emb|CAX55135.1| Vancomycin resistance protein [Erwinia pyrifoliae Ep1/96]
gi|283477911|emb|CAY73827.1| Protein sanA [Erwinia pyrifoliae DSM 12163]
Length = 237
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 70/214 (32%), Gaps = 30/214 (14%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R I+ + + L S G+ + K + Y P + V+LG
Sbjct: 4 RLIYGLIIIITLISATALGLDRWVSWKTAPYVYDDLTALPHRQVG----VVLGTAKFYRT 59
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
R+ + Y S K + +++SG + E + L+
Sbjct: 60 GGINQYY------LYRMQGALNAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRRDLIA 108
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+GV+ DI L+ T + + + + I+++ +H +R+ L H GI +
Sbjct: 109 AGVDPSDIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERALLIALHMGIQAQ 165
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
P N + L+E L
Sbjct: 166 CYAV----------PSPKNMM--SVRLREVAARL 187
>gi|290558802|gb|EFD92195.1| protein of unknown function DUF218 [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 193
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 45/130 (34%), Gaps = 29/130 (22%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IV+LG + R+ + + Y K + +IISG
Sbjct: 33 AIVVLGG----------------PKQDKRLEKALYEYNKDKSAA----LIISGFGKDFEK 72
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHL 185
E L D I E +S++T NA+ S +I+ I +VS
Sbjct: 73 KTEYTAKGKGL-------DSILNENESINTEDNARNSLYLIRENLPNINEITIVSDYAQQ 125
Query: 186 KRSQLYFQHF 195
R+++ F +
Sbjct: 126 PRAEMLFNKY 135
>gi|295690243|ref|YP_003593936.1| hypothetical protein Cseg_2870 [Caulobacter segnis ATCC 21756]
gi|295432146|gb|ADG11318.1| protein of unknown function DUF218 [Caulobacter segnis ATCC 21756]
Length = 205
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSI 213
+T NA ++ ++ K++I+V++ YH+ RS L G+ +
Sbjct: 103 NTVGNALETAEWARSKGYKSLIVVTADYHMPRSMLELSAAMPGVKLFPYPVKTDLNAHRW 162
Query: 214 IPLSANFYLTELALKEY 230
S + + EY
Sbjct: 163 WKTSIS---ARRMIVEY 176
>gi|322419180|ref|YP_004198403.1| hypothetical protein GM18_1662 [Geobacter sp. M18]
gi|320125567|gb|ADW13127.1| protein of unknown function DUF218 [Geobacter sp. M18]
Length = 200
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 70/219 (31%), Gaps = 38/219 (17%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
++ F+ L + + IL L K G+ +L G T+ + A
Sbjct: 9 VLAGFLFLVVLPSFPRVRAILAAPL--------TVTDSKAQGDACYVLAGGETVWERLNA 60
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
RI Y +I Y + L+ GV
Sbjct: 61 AADLVHLGRVPRI------YLMNDTSRDQYSI------RAGESRTRIQWYVDYLVWRGVP 108
Query: 145 RDDIKLETQSLD---TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH---FGIN 198
D I ++ T A+ ++ + + +++VSSA H++R+ L FQ +
Sbjct: 109 ADRISFIPKTKGLLGTRSEARAFAAQL-PKGARQVVIVSSAPHMRRALLTFQRILPAQVR 167
Query: 199 TKA-SCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
+ +D + PL EY+ +L+
Sbjct: 168 VVPYAATDLAGSQELYHPLWV----------EYLKLLVY 196
>gi|118478759|ref|YP_895910.1| hypothetical protein BALH_3151 [Bacillus thuringiensis str. Al
Hakam]
gi|118417984|gb|ABK86403.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 217
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ ++I + G P P + Y+ + II++GG
Sbjct: 23 PQKCDVIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNQIIVTGGT 61
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+E+ V NKL+E GV D I ET SL + N + + +
Sbjct: 62 SLHGMKHPSWNYGDLSEAEVIVNKLMEHGVPTDAILFETNSLHSIANVMEAKKIFDFTKI 121
Query: 174 KNIILV 179
++ V
Sbjct: 122 NRLLFV 127
>gi|113475490|ref|YP_721551.1| hypothetical protein Tery_1821 [Trichodesmium erythraeum IMS101]
gi|110166538|gb|ABG51078.1| protein of unknown function DUF218 [Trichodesmium erythraeum
IMS101]
Length = 191
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 60/179 (33%), Gaps = 42/179 (23%)
Query: 34 SFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQS 93
S I W ++ LL L SYQ+ + + + +++LG +
Sbjct: 17 SLISWFLLG--LLATLWISYQQISGTIKPPQ---ALLVLGG------------------A 53
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES-GVERDDIKLET 152
R + + I +S G + Y L G+ + + L+
Sbjct: 54 IEREAFAAEFARQH----PNLDIWVSSGSNPE--------YAEWLFSQAGISQTRLHLDY 101
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS------QLYFQHFGINTKASCSD 205
++DT N + +K+ ++ LV+S H++R+ L + S
Sbjct: 102 DAVDTVTNFTTTVDKLKSQGITSVYLVTSDDHMRRAIVIGKIVLSSRGIAFKPLPVPSG 160
>gi|170078127|ref|YP_001734765.1| hypothetical protein SYNPCC7002_A1518 [Synechococcus sp. PCC 7002]
gi|169885796|gb|ACA99509.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
Length = 139
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY----F 192
++ + + + ++ +++DT N + +++ L++S +H++R+Q F
Sbjct: 13 IFQQAAIPENRLHIDHRAIDTVTNFTTLVKDFSDRHIQHVYLITSDFHMRRAQAIAFFVF 72
Query: 193 QHFGI--NTKASCSDYLN 208
GI S+ N
Sbjct: 73 GSRGIITTPIPIPSNQPN 90
>gi|261217931|ref|ZP_05932212.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261321219|ref|ZP_05960416.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|260923020|gb|EEX89588.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293909|gb|EEX97405.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 151
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 8/98 (8%)
Query: 76 TTIIPTIPAIRIEPSFQSYS-RIFETMRLYKSCKQHSMHCTIIISGGDPQKHG----LAE 130
I + I SY R+ E + +I +G + +E
Sbjct: 16 HCIYDPLEGADIIIGLGSYDPRVAERAS---DLYLEGLAPWLIFTGRSGRGTDKLYKASE 72
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMI 168
+ + + GV I +E + + +N +FS +
Sbjct: 73 AEAFAEIAIRRGVPERAIIIEPNATNIGENIRFSREKL 110
>gi|238504888|ref|XP_002383673.1| DUF218 domain protein [Aspergillus flavus NRRL3357]
gi|220689787|gb|EED46137.1| DUF218 domain protein [Aspergillus flavus NRRL3357]
Length = 344
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 71/208 (34%), Gaps = 19/208 (9%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ--RPLLSPQWKKDGNIIVL--- 71
Q F S ++ S + + IP L + +YQ + ++ + + ++I++
Sbjct: 34 GQCWYTPFPWSLNLIFLSPLEFCEIPFFALIFVSLNYQLDKAIMHSKPSQCNHLIIVCCH 93
Query: 72 ---LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH-- 126
LG T + + ++ H +I SGG +K
Sbjct: 94 AIYLGGPTHGLSEDEWLLEPFQNGETPTFTAHVKAGLQALAHDPAALLIFSGGATKKDRT 153
Query: 127 GLAESIVYNNKLLESG-----VERDDIKLETQSLDTFQNAQFSS---SMIKNMQGKNIIL 178
L E Y E+ V I ET + D++QN FS + + + +
Sbjct: 154 SLTEGESYLALAQENNYFSYTVPPAQIIPETHATDSYQNVLFSLLRFKLYTGVYPSRVTV 213
Query: 179 VSSAYHLKRSQLY-FQHFGINTKASCSD 205
V+ + +R Y F G+ S
Sbjct: 214 VTHEFKRRRVMEYHFPAIGLVPIVRGSG 241
>gi|310768073|gb|ADP13023.1| hypothetical protein EJP617_33420 [Erwinia sp. Ejp617]
Length = 237
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 70/214 (32%), Gaps = 30/214 (14%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R I+ + + L S G+ + K + Y P + V+LG
Sbjct: 4 RLIYGLIIIITLISATALGLDRWVSWKTAPYVYDDLTALPHRQVG----VVLGTAKFYRT 59
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
R+ + Y S K + +++SG + E + L+
Sbjct: 60 GGINQYY------LYRMQGALNAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRRDLIA 108
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+GV+ DI L+ T + + + + I+++ +H +R+ L H GI +
Sbjct: 109 AGVDPSDIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERALLIALHMGIQAQ 165
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
P N + L+E L
Sbjct: 166 CYAV----------PSPKNMM--SVRLREVAARL 187
>gi|256158611|ref|ZP_05456498.1| hypothetical protein BcetM4_07081 [Brucella ceti M490/95/1]
gi|256254019|ref|ZP_05459555.1| hypothetical protein BcetB_06923 [Brucella ceti B1/94]
gi|261221160|ref|ZP_05935441.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265997120|ref|ZP_06109677.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260919744|gb|EEX86397.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262551588|gb|EEZ07578.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 211
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 9/110 (8%)
Query: 76 TTIIPTIPAIRIEPSFQSYS-RIFETMRLYKSCKQHSMHCTIIISGGDPQKHG----LAE 130
I + I SY R+ E + +I +G + +E
Sbjct: 16 HCIYDPLEGADIIIGLGSYDPRVAERAS---DLYLEGLAPWLIFTGRSGRGTDKLYKASE 72
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ + + GV I +E + + +N +FS + I V+
Sbjct: 73 AEAFAEIAIRRGVPERAIIIEPNATNIGENIRFSREKLAWDAVSG-IFVT 121
>gi|17988299|ref|NP_540933.1| hypothetical protein BMEI2016 [Brucella melitensis bv. 1 str. 16M]
gi|225853539|ref|YP_002733772.1| hypothetical protein BMEA_A2172 [Brucella melitensis ATCC 23457]
gi|256045714|ref|ZP_05448592.1| hypothetical protein Bmelb1R_14510 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256262977|ref|ZP_05465509.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260563016|ref|ZP_05833502.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265992135|ref|ZP_06104692.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|17984071|gb|AAL53197.1| hypothetical protein BMEI2016 [Brucella melitensis bv. 1 str. 16M]
gi|225641904|gb|ACO01818.1| protein of unknown function DUF218 [Brucella melitensis ATCC 23457]
gi|260153032|gb|EEW88124.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|263003201|gb|EEZ15494.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263092850|gb|EEZ17025.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|326410108|gb|ADZ67173.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326539825|gb|ADZ88040.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 211
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 50/162 (30%), Gaps = 12/162 (7%)
Query: 76 TTIIPTIPAIRIEPSFQSYS-RIFETMRLYKSCKQHSMHCTIIISGGDPQKHG----LAE 130
I + I SY R+ E + +I +G + +E
Sbjct: 16 HCIYDPLEGADIIIGLGSYDPRVAERAS---DLYLEGLAPWLIFTGRSGRGTDKLYKASE 72
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ + + GV I +E + + +N +FS + I V+ +R
Sbjct: 73 AEAFAEIAIRRGVPERAIIIEPNATNIGENIRFSREKLAWDAVSG-IFVTKPQTQRRVHA 131
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+AS S L ++ + E+ + E G
Sbjct: 132 TMLRQWPEARASISAPLVSFEE---QPTAEFPLEMLIHEMTG 170
>gi|256112435|ref|ZP_05453356.1| hypothetical protein Bmelb3E_07113 [Brucella melitensis bv. 3 str.
Ether]
gi|265993873|ref|ZP_06106430.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|262764854|gb|EEZ10775.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
Length = 211
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 50/162 (30%), Gaps = 12/162 (7%)
Query: 76 TTIIPTIPAIRIEPSFQSYS-RIFETMRLYKSCKQHSMHCTIIISGGDPQKHG----LAE 130
I + I SY R+ E + +I +G + +E
Sbjct: 16 HCIYDPLEGADIIIGLGSYDPRVAERAS---DLYLEGLAPWLIFTGRSGRGTDKLYKASE 72
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ + + GV I +E + + +N +FS + I V+ +R
Sbjct: 73 AEAFAEIAIRRGVPERAIIIEPNATNIGENIRFSREKLAWDAVSG-IFVTKPQTQRRVHA 131
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
+AS S L ++ + E+ + E G
Sbjct: 132 TMLRQWPEARASISAPLVSFEE---QPTAEFPLEMLIHEMTG 170
>gi|126657368|ref|ZP_01728527.1| Putative SanA protein [Cyanothece sp. CCY0110]
gi|126621355|gb|EAZ92067.1| Putative SanA protein [Cyanothece sp. CCY0110]
Length = 211
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 19/169 (11%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
+ L GT+ ++ +Y R+ +LY++ K +++SG D
Sbjct: 40 IALVLGTSKYIQQSGETYYNAYYAY-RVQAAAKLYQAGKIDG----VLVSG-DNSTQFYD 93
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E L++ GV I + T + + + +N +VS +H +R+
Sbjct: 94 EPSQMTQDLIKLGVPSQYITQDYAGFRTLDSIVRAKKV---FGLENYTIVSQKFHCQRAI 150
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
Q G N A + + ++ + L+E + A+
Sbjct: 151 YIAQSKGQNPIAFSASNVQSFAGLKTR----------LREVLARFKAFL 189
>gi|197104094|ref|YP_002129471.1| hypothetical protein PHZ_c0628 [Phenylobacterium zucineum HLK1]
gi|196477514|gb|ACG77042.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 211
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 61/155 (39%), Gaps = 18/155 (11%)
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP--QKHGLAESIVYNNK 137
P I S RI + L + +++SG +P + + +
Sbjct: 35 PPADGIVALTGAGSKERIAAAIGLLEDGYGR----RVLVSGVNPEASREDIRNLSRAVRR 90
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL----YFQ 193
L + V+ + DT NA+ ++ + M+ +++ +V++ YH+ R+ L F
Sbjct: 91 LYDCCVDLGF-----TAADTVGNARETAEWTEAMRYRSLTIVTADYHMPRAMLELRAVFH 145
Query: 194 HFG--INTKASCSDYLNAYYSII-PLSANFYLTEL 225
G ++T A + L + + P +A + E
Sbjct: 146 GTGVRLSTYAVPTPALKSSHWWRQPRAARLMVVEY 180
>gi|218904632|ref|YP_002452466.1| hypothetical protein BCAH820_3516 [Bacillus cereus AH820]
gi|218538667|gb|ACK91065.1| conserved domain protein [Bacillus cereus AH820]
Length = 225
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ ++I + G P P + Y+ + II++GG
Sbjct: 31 PQKCDVIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNQIIVTGGT 69
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+E+ V NKL+E GV +D I ET SL + N + + +
Sbjct: 70 SLHGMKHPSWNYGDLSEAEVIVNKLMEHGVPKDAIMFETNSLHSIANVMEAKKIFDFTKV 129
Query: 174 KNIILV 179
++ V
Sbjct: 130 NRLLFV 135
>gi|262173788|ref|ZP_06041465.1| hypothetical protein VII_000878 [Vibrio mimicus MB-451]
gi|261891146|gb|EEY37133.1| hypothetical protein VII_000878 [Vibrio mimicus MB-451]
Length = 287
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 14/94 (14%)
Query: 107 CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERD-------DIKLETQSLDTFQ 159
+ I+ GG ++E+ + + V++ D+ LE QS + +
Sbjct: 36 QCHENSSALIVFCGGVTAGQTVSEAQRMHEYF-QQQVQQKGLVLQHVDVLLEQQSTSSVE 94
Query: 160 NAQFSSSM------IKNMQGKNIILVSSAYHLKR 187
N + + + + + + LVSS YHLKR
Sbjct: 95 NIEHLAHVLLASQRLHAGETLTLTLVSSDYHLKR 128
>gi|300871750|ref|YP_003786623.1| sanA protein [Brachyspira pilosicoli 95/1000]
gi|300689451|gb|ADK32122.1| sanA protein [Brachyspira pilosicoli 95/1000]
Length = 273
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 71/189 (37%), Gaps = 18/189 (9%)
Query: 25 FMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPA 84
F+ F+++F FI +I + Y S + ++ ++LG +
Sbjct: 49 FILEFVIIFVFIA--LISYFSVSSYSKKYIYD--SIEEIPYNDVALVLGTSKYLSDGRIN 104
Query: 85 IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVE 144
+ + R+ LY + K I++SG D + E L++ GV+
Sbjct: 105 MYFKF------RMDAAYELYTNGKVKY----ILVSG-DNRHRSYNEPRQMRLDLIKLGVD 153
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ I L+ T + ++ + N +VS +H +R+ + IN A +
Sbjct: 154 KRHIFLDFAGFRTRDSILRANRVFD---LTNFTIVSQPFHNERAVFIAREKKINAIAYSA 210
Query: 205 DYLNAYYSI 213
D + Y I
Sbjct: 211 DNVRKLYRI 219
>gi|148657530|ref|YP_001277735.1| hypothetical protein RoseRS_3427 [Roseiflexus sp. RS-1]
gi|148569640|gb|ABQ91785.1| protein of unknown function DUF218 [Roseiflexus sp. RS-1]
Length = 205
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/132 (12%), Positives = 49/132 (37%), Gaps = 12/132 (9%)
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIV 133
G ++P A+ + + ++ LY+ M II++G + +
Sbjct: 60 AGAAVVPGE-AVDGALTSEQKAQCDHAANLYR----RGMVSRIILTG-------VTVAPR 107
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
L++ G + +E +S + + +++M + ++++V + + +
Sbjct: 108 ARQYLIDQGAPPQVLLIEEESASLVEGLRAAANMARAQGISSVVIVVDPPAMLTALKVAR 167
Query: 194 HFGINTKASCSD 205
G+ S +
Sbjct: 168 DEGLTAYGSPAG 179
>gi|301054993|ref|YP_003793204.1| hypothetical protein BACI_c34510 [Bacillus anthracis CI]
gi|300377162|gb|ADK06066.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
Length = 225
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ ++I + G P P + Y+ + II++GG
Sbjct: 31 PQKCDVIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNQIIVTGGT 69
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+E+ V NKL+E GV +D I E SL + N + + +
Sbjct: 70 SLHGMKHPSWNYGDLSEAEVIVNKLMEHGVPKDAILFEKNSLHSIANVIEAKKIFDFTKV 129
Query: 174 KNIILV 179
++ V
Sbjct: 130 NRLLFV 135
>gi|148657753|ref|YP_001277958.1| hypothetical protein RoseRS_3653 [Roseiflexus sp. RS-1]
gi|148569863|gb|ABQ92008.1| protein of unknown function DUF218 [Roseiflexus sp. RS-1]
Length = 191
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 48/163 (29%), Gaps = 27/163 (16%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD 122
+ IV+LG G + R + LY+ + T + GG
Sbjct: 29 PAHADAIVVLGGGFPL-----------------RDQHAIDLYREGWAREIWRTGDLPGGS 71
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLD-TFQNAQFSSSMIKNMQGKNIILVSS 181
L+ GV + D T+ + + + M + + +++V+
Sbjct: 72 VVLQK------ARRLALQQGVPETAFV--PVATDSTWADGREIARMAQERHAQRLLIVTE 123
Query: 182 AYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTE 224
H +R+ + + Y + S + E
Sbjct: 124 WPHSRRAMCVINRH-LAGTGVVAFYDGPRHPPYTPSNWWRDPE 165
>gi|67921008|ref|ZP_00514527.1| Protein of unknown function DUF218 [Crocosphaera watsonii WH 8501]
gi|67857125|gb|EAM52365.1| Protein of unknown function DUF218 [Crocosphaera watsonii WH 8501]
Length = 238
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 73/215 (33%), Gaps = 29/215 (13%)
Query: 24 FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIP 83
+ F++L I W I + Q Y P+ K + L GT+
Sbjct: 29 ILLIAFLVLIISIDWYIGN----QFNQSIYSDINQIPRKK------IALVLGTSKYVNQS 78
Query: 84 AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
++ +Y R+ +LY++ K I++SG D E L++ GV
Sbjct: 79 ERTRYNAYYAY-RMKAAAKLYQAKKVDG----ILVSG-DNSTEFYDEPSQMTEDLIKLGV 132
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
I + T + + + ++ +VS +H +R+ + G N A
Sbjct: 133 PAQYINQDYAGFRTLDSIVRAKEI---SGLESYTIVSQKFHCQRALYIAKAKGQNPIAFS 189
Query: 204 SDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
+ + ++ I L+E A+
Sbjct: 190 ASDIQSFAGIRTR----------LREVFARFKAFL 214
>gi|254700742|ref|ZP_05162570.1| hypothetical protein Bsuib55_07777 [Brucella suis bv. 5 str. 513]
gi|254707371|ref|ZP_05169199.1| hypothetical protein BpinM_10460 [Brucella pinnipedialis
M163/99/10]
gi|254709087|ref|ZP_05170898.1| hypothetical protein BpinB_02237 [Brucella pinnipedialis B2/94]
gi|256030612|ref|ZP_05444226.1| hypothetical protein BpinM2_08162 [Brucella pinnipedialis
M292/94/1]
gi|256060074|ref|ZP_05450256.1| hypothetical protein Bneo5_06916 [Brucella neotomae 5K33]
gi|256370510|ref|YP_003108021.1| hypothetical protein BMI_I2134 [Brucella microti CCM 4915]
gi|260169518|ref|ZP_05756329.1| hypothetical protein BruF5_14394 [Brucella sp. F5/99]
gi|261314854|ref|ZP_05954051.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316588|ref|ZP_05955785.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261324051|ref|ZP_05963248.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261751253|ref|ZP_05994962.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261759046|ref|ZP_06002755.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265987660|ref|ZP_06100217.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|294851338|ref|ZP_06792011.1| hypothetical protein BAZG_00238 [Brucella sp. NVSL 07-0026]
gi|306843529|ref|ZP_07476130.1| Hypothetical protein BIBO1_0182 [Brucella sp. BO1]
gi|256000673|gb|ACU49072.1| hypothetical protein BMI_I2134 [Brucella microti CCM 4915]
gi|261295811|gb|EEX99307.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261300031|gb|EEY03528.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261303880|gb|EEY07377.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261739030|gb|EEY27026.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261741006|gb|EEY28932.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|264659857|gb|EEZ30118.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|294819927|gb|EFG36926.1| hypothetical protein BAZG_00238 [Brucella sp. NVSL 07-0026]
gi|306276220|gb|EFM57920.1| Hypothetical protein BIBO1_0182 [Brucella sp. BO1]
Length = 211
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 9/110 (8%)
Query: 76 TTIIPTIPAIRIEPSFQSYS-RIFETMRLYKSCKQHSMHCTIIISGGDPQKHG----LAE 130
I + I SY R+ E + +I +G + +E
Sbjct: 16 HCIYDPLEGADIIIGLGSYDPRVAERAS---DLYLEGLAPWLIFTGRSGRGTDKLYKASE 72
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ + + GV I +E + + +N +FS + I V+
Sbjct: 73 AEAFAEIAIRRGVPERAIIIEPNATNIGENIRFSREKLAWDAVSG-IFVT 121
>gi|260768719|ref|ZP_05877653.1| SanA protein [Vibrio furnissii CIP 102972]
gi|260616749|gb|EEX41934.1| SanA protein [Vibrio furnissii CIP 102972]
Length = 235
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 53/147 (36%), Gaps = 19/147 (12%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ V+LG + T+ I RI + L++ K + ++SG +
Sbjct: 35 PKFQVAVVLGTSKYLGRTLNDYYIH-------RINAAIDLFEQGKVNG----FLLSGDNA 83
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E LL++GV + I L+ T + + + N ++++ +
Sbjct: 84 -HRSYNEPWTMKRDLLKAGVPNEQIYLDYAGFRTLDSIVRAKRIFD---TDNFLIITQRF 139
Query: 184 HLKRSQLYFQHFGIN----TKASCSDY 206
H +R+ H IN +++
Sbjct: 140 HCERALFIANHHDINATCLAVPGPTNH 166
>gi|149180646|ref|ZP_01859150.1| hypothetical protein BSG1_16855 [Bacillus sp. SG-1]
gi|148851799|gb|EDL65945.1| hypothetical protein BSG1_16855 [Bacillus sp. SG-1]
Length = 340
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 13/77 (16%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGG---------DPQKHGLAESIVYNNKLLESGVERDDIK 149
+ + ++ II++GG D E+ V + L E+G+ +D I
Sbjct: 184 KAIEAFR----KGFCGKIIVTGGKSLTGTPHADWPDESAKEADVIVSHLAEAGIPKDKIV 239
Query: 150 LETQSLDTFQNAQFSSS 166
E +S ++ +N ++
Sbjct: 240 YENRSTNSLENVLYAKE 256
>gi|317048843|ref|YP_004116491.1| hypothetical protein Pat9b_2635 [Pantoea sp. At-9b]
gi|316950460|gb|ADU69935.1| protein of unknown function DUF218 [Pantoea sp. At-9b]
Length = 239
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 79/224 (35%), Gaps = 26/224 (11%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
I++IF F++L + + K F Y+ P + V+LG
Sbjct: 2 IKRIFIGLLFIILLMMATALGLDRWISWKTAPFIYENVAALPHREVG----VVLGTAKYY 57
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ RI + Y S K + +++SG + E + L
Sbjct: 58 RTGVINQYY------LYRIQGALNAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRRDL 106
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+++GV+ DI L+ T + + + + I+++ +H +R+ H GI
Sbjct: 107 IKAGVDPADIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHLGIQ 163
Query: 199 TK----ASCSDYLNAYYSIIPLS-ANFYLTELALKE--YIGILI 235
+ S + L + + L +E ++G L+
Sbjct: 164 AQCYAVPSPKNMLTVRFREVGARLGALADLYLMKREPRFLGPLV 207
>gi|315180420|gb|ADT87334.1| sanA protein [Vibrio furnissii NCTC 11218]
Length = 235
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 53/147 (36%), Gaps = 19/147 (12%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
+ V+LG + T+ I RI + L++ K + ++SG +
Sbjct: 35 PKFQVAVVLGTSKYLGRTLNDYYIH-------RINAAIDLFEQGKVNG----FLLSGDNA 83
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
E LL++GV + I L+ T + + + N ++++ +
Sbjct: 84 -HRSYNEPWTMKRDLLKAGVPNEQIYLDYAGFRTLDSIVRAKRIFD---TDNFLIITQRF 139
Query: 184 HLKRSQLYFQHFGIN----TKASCSDY 206
H +R+ H IN +++
Sbjct: 140 HCERALFIANHHDINATCLAVPGPTNH 166
>gi|148559888|ref|YP_001259912.1| hypothetical protein BOV_2028 [Brucella ovis ATCC 25840]
gi|306842776|ref|ZP_07475418.1| Hypothetical protein BIBO2_2553 [Brucella sp. BO2]
gi|148371145|gb|ABQ61124.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|306287120|gb|EFM58625.1| Hypothetical protein BIBO2_2553 [Brucella sp. BO2]
Length = 226
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 9/110 (8%)
Query: 76 TTIIPTIPAIRIEPSFQSYS-RIFETMRLYKSCKQHSMHCTIIISGGDPQKHG----LAE 130
I + I SY R+ E + +I +G + +E
Sbjct: 31 HCIYDPLEGADIIIGLGSYDPRVAERAS---DLYLEGLAPWLIFTGRSGRGTDKLYKASE 87
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
+ + + GV I +E + + +N +FS + I V+
Sbjct: 88 AEAFAEIAIRRGVPERAIIIEPNATNIGENIRFSREKLAWDAVSG-IFVT 136
>gi|296137799|ref|YP_003645042.1| hypothetical protein Tpau_0049 [Tsukamurella paurometabola DSM
20162]
gi|296025933|gb|ADG76703.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 185
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 54/174 (31%), Gaps = 42/174 (24%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ F+ + +G+ + L+ + +V+LG
Sbjct: 9 WSTAVLVVVFLGAVAAVGYPVFGQAKQDPLER--------------VDAVVVLGGEHD-- 52
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
R ++L K T+++S + V L
Sbjct: 53 ---------------GREQYGLQLAKE----GYAPTLVLS-----NPYEPDDHVMAP-LC 87
Query: 140 ESGVERDDIKLE-TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ V+ ++ E T A F+ + + K +I+VS YHL RS+ F
Sbjct: 88 DRRVDGIEVLCEVPDPSTTRGEALFTERLARERGWKKVIVVSWRYHLPRSRYIF 141
>gi|94497844|ref|ZP_01304410.1| hypothetical protein SKA58_17288 [Sphingomonas sp. SKA58]
gi|94422733|gb|EAT07768.1| hypothetical protein SKA58_17288 [Sphingomonas sp. SKA58]
Length = 176
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/208 (14%), Positives = 67/208 (32%), Gaps = 47/208 (22%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
I ++ LL +G+ L + L + + IV+L G
Sbjct: 2 IVRLAALALLGWVLGFAWFAIFLPEPL------------DGRRTDAIVVLTGG------- 42
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
RI + L + M +ISG + +
Sbjct: 43 -----------PGRIDRGIALMQQGAARRM----LISG---VDRSVRPGELAAQYDAPEA 84
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
+ I L +++DT N ++ + + + LV++ +H++RS + +
Sbjct: 85 LFDCCITLGREAIDTRSNGLETARWLARRDYQTVRLVTTDWHMRRSA-------LELTQA 137
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEY 230
++ Y +P + + ++EY
Sbjct: 138 LPPRIHIVYDAVPSHPSL---SVLMREY 162
>gi|322832144|ref|YP_004212171.1| hypothetical protein Rahaq_1421 [Rahnella sp. Y9602]
gi|321167345|gb|ADW73044.1| protein of unknown function DUF218 [Rahnella sp. Y9602]
Length = 307
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 58/186 (31%), Gaps = 18/186 (9%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K F ++ + I + Y + + V+LG
Sbjct: 3 KRLIAGVFGIIILMLAVAIGLDQWISLRTQPYIYDEVQTLPHRQVG--VVLGTAKYYRTG 60
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ RI + Y S K +++SG + Q E L+ +
Sbjct: 61 VINQYY------LYRIQGAINAYNSGKVKY----LLLSGDNAQ-QSYNEPSTMRRDLIAA 109
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK- 200
G+ DI L+ T + + + + I+++ +H +R+ H GI +
Sbjct: 110 GIPASDIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQC 166
Query: 201 -ASCSD 205
A S
Sbjct: 167 FAVPSP 172
>gi|119493570|ref|ZP_01624235.1| hypothetical protein L8106_26002 [Lyngbya sp. PCC 8106]
gi|119452624|gb|EAW33806.1| hypothetical protein L8106_26002 [Lyngbya sp. PCC 8106]
Length = 216
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
++GV+ + L+ +++DT N +K ++ L++S +H+ R+
Sbjct: 85 RTATEIFQQAGVDLGRVHLDYRAVDTVTNFSTLVEDLKKRDISHVYLITSDFHMSRAMAI 144
Query: 192 ----FQHFGINTKASC 203
F GI
Sbjct: 145 ASIVFGSQGIAFTPVP 160
>gi|237809576|ref|YP_002894016.1| hypothetical protein Tola_2837 [Tolumonas auensis DSM 9187]
gi|237501837|gb|ACQ94430.1| protein of unknown function DUF218 [Tolumonas auensis DSM 9187]
Length = 227
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/238 (15%), Positives = 78/238 (32%), Gaps = 36/238 (15%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML +I + + + + I + ++ + LF + + ++ Q++Y P
Sbjct: 1 MLTRFIQFVTTIFTPRLRRIIRRTVITLSVTLFLLLW--LANQVISHERQYTYDNVEKVP 58
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K V+LG + I + +RI T L+ II+SG
Sbjct: 59 YNKVA----VVLG------TSKYLISGGLNQYFQNRIDATADLW----FSGKISQIIVSG 104
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNII 177
+ E +LL+ G+ I + T S+++
Sbjct: 105 DNAHMS-YNEPREMRRELLKRGIPARAIYSDYAGFRTLD------SILRAHGVFGQTRFT 157
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
+VS + +R+ +H ++ + ++AY + +E L
Sbjct: 158 VVSQRFQNERAIYLARHHKLDVIGFNARDVDAYTGFKTRT----------REIFARLW 205
>gi|288962085|ref|YP_003452380.1| hypothetical protein AZL_d00100 [Azospirillum sp. B510]
gi|288914351|dbj|BAI75836.1| hypothetical protein AZL_d00100 [Azospirillum sp. B510]
Length = 213
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 66/184 (35%), Gaps = 45/184 (24%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ IV+L G +R+ + L + + + +SG
Sbjct: 57 DAIVVLTGGR------------------NRLSTGLELLAAGRAK----KLFVSG------ 88
Query: 127 GLAESIVYNNKL-LESGVERDD---IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
+ + + L L + I L + T NA ++ + + ++ LV++
Sbjct: 89 -VYDGVEVQELLKLSRHSPTEMECCITLGYSADSTIGNAYETADWMHDQGFHSLRLVTAN 147
Query: 183 YHLKRSQLYFQHFGIN------TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
YH++RS L + + + +L+ ++ P +AN +T EY +L+
Sbjct: 148 YHMRRSLLELSMAMPDVDLLPHPVVAPTVHLDDWWMW-PGTANLLVT-----EYNKLLVV 201
Query: 237 YYRG 240
R
Sbjct: 202 GLRW 205
>gi|330015051|ref|ZP_08308079.1| hypothetical protein HMPREF9538_05800 [Klebsiella sp. MS 92-3]
gi|328532088|gb|EGF58895.1| hypothetical protein HMPREF9538_05800 [Klebsiella sp. MS 92-3]
Length = 210
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 46/125 (36%), Gaps = 19/125 (15%)
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G G +P + + + S ++E +R + + G E+
Sbjct: 1 GGGAQAVPLLISGGV---GHSTGYLYEAVRQDPRYRTLPVD-------------GRPEAH 44
Query: 133 VYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQ 189
V + + + + +E QS + +NA+F+ + +++ + I++ +R+
Sbjct: 45 VLADIAHDYWHIPHSRLVVEDQSTNCGENARFTRTTLESRGLAHRRGIVIQDPTMQRRTM 104
Query: 190 LYFQH 194
F
Sbjct: 105 ATFAR 109
>gi|300722464|ref|YP_003711752.1| putative vancomycin sensitivity, oxidoreductase [Xenorhabdus
nematophila ATCC 19061]
gi|297628969|emb|CBJ89554.1| putative vancomycin sensitivity, oxidoreductase [Xenorhabdus
nematophila ATCC 19061]
Length = 240
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 52/139 (37%), Gaps = 20/139 (14%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + Q H E I L+++G+ +I ++
Sbjct: 69 RIQGAVNAYNSGKVKY----LLLSGDNAQ-HNYNEPITMRKDLIKAGIPASNIVMDFAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T + + + + +++ +H +R+ L HFGI + P
Sbjct: 124 RTLDSIIRTRKVFD---TDDFTIITQRFHCERALLIAIHFGIEAQCYAV----------P 170
Query: 216 LSANFYLTELALKEYIGIL 234
N + +E + L
Sbjct: 171 SPKNMM--TIRFREVLARL 187
>gi|209524650|ref|ZP_03273197.1| protein of unknown function DUF218 [Arthrospira maxima CS-328]
gi|209494794|gb|EDZ95102.1| protein of unknown function DUF218 [Arthrospira maxima CS-328]
Length = 235
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 60/177 (33%), Gaps = 42/177 (23%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ ++ + +C ++LF +G + LL ++ ++ + ++LG
Sbjct: 16 RRRVKILLIAACALMLFMSLG---LVNHLL----------IMRSSAREPVDTFLVLGG-- 60
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
S R +L IIIS G ++
Sbjct: 61 ----------------SIRREIYVSQLATEY----PQIPIIISKG-------SDDPCIVK 93
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ + LE + TF N FS ++ +++ +++S HL R+Q +
Sbjct: 94 LFERNKTPSQGVWLEKCANSTFGNYMFSQPLLTQWGARHVKILTSDTHLPRAQWMAK 150
>gi|255947882|ref|XP_002564708.1| Pc22g06810 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591725|emb|CAP97969.1| Pc22g06810 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 267
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 58/169 (34%), Gaps = 27/169 (15%)
Query: 45 LLKHLQFSYQRPLLSPQWKKDGNIIV---LLGNGTTIIPTIPAIRIEPSFQSYSRIFETM 101
LL Q P LS D +I +L + ++ +PS + +
Sbjct: 13 LLSEFLSDNQLPDLSTTSPVDCIVICASAVL---HSAEVLFKTLQQKPSLTKALVLCGGI 69
Query: 102 -----RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI-------K 149
LY + K H + I + GL E+ V L + +R I
Sbjct: 70 GHSTELLYNAVKSHPVFSQI-----AHEIQGLPEAKVLERIL-DQFFDRSLITKEGCQVL 123
Query: 150 LETQSLDTFQNAQFSSSMIKNMQ---GKNIILVSSAYHLKRSQLYFQHF 195
LE +S + QNA FS ++ I++ + R++ F+
Sbjct: 124 LEPRSTNCGQNASFSRRVLDEAGFRAPATCIIIQDPTMMLRTRASFEKA 172
>gi|325281519|ref|YP_004254061.1| hypothetical protein Odosp_2910 [Odoribacter splanchnicus DSM
20712]
gi|324313328|gb|ADY33881.1| protein of unknown function DUF218 [Odoribacter splanchnicus DSM
20712]
Length = 227
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 53/141 (37%), Gaps = 14/141 (9%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
VLLG P + R P+ RI + L+++ K I++SG D ++
Sbjct: 65 VLLG----TSPKLRGGR--PNLYFNYRITAAVELFQAGK----ISRILVSG-DNRRMNYN 113
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + L+ G+ I ++ + T + + + ++S +H +R+
Sbjct: 114 EPVEMRKALIAHGIPDSVIVMDFAGIRTLDSVIRAKKV---FGQDRFTIISQRFHNERAL 170
Query: 190 LYFQHFGINTKASCSDYLNAY 210
GI + ++ Y
Sbjct: 171 YIAGRNGIEAVGFNAKDVDVY 191
>gi|67521560|ref|XP_658843.1| hypothetical protein AN1239.2 [Aspergillus nidulans FGSC A4]
gi|40746676|gb|EAA65832.1| hypothetical protein AN1239.2 [Aspergillus nidulans FGSC A4]
gi|259488440|tpe|CBF87874.1| TPA: DUF218 domain protein (AFU_orthologue; AFUA_7G01750)
[Aspergillus nidulans FGSC A4]
Length = 270
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQ---GKNIILVSSAYHLKRSQLYFQHF 195
I +E +S + +NA FS ++ + +L+ ++R+ FQ
Sbjct: 124 RILIEDRSTNCGENALFSRKVLDDAGLHNLHRCVLIQDPTMMRRTVASFQKA 175
>gi|307544379|ref|YP_003896858.1| hypothetical protein HELO_1789 [Halomonas elongata DSM 2581]
gi|307216403|emb|CBV41673.1| hypothetical protein HELO_1789 [Halomonas elongata DSM 2581]
Length = 253
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 49/171 (28%), Gaps = 21/171 (12%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + R+ L + +++SG D E +
Sbjct: 55 GIVFGTSHWTRSGARNPHFEGRMRAAASLIHDGRVMH----LLLSG-DNSTRYYNEPVTM 109
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L V + L+ TF + + K +LV+ ++HL R+
Sbjct: 110 WKDLRGRAVPDSAMTLDYAGFSTFDTLARARDVFA---VKRALLVTQSWHLPRALFIADA 166
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI---LIAYYRGNR 242
GI + + P + L +E++ L Y R
Sbjct: 167 LGIEARGCAAPER-------PSDSTLRLRA---REWVARAATLGDIYLWGR 207
>gi|62290954|ref|YP_222747.1| hypothetical protein BruAb1_2087 [Brucella abortus bv. 1 str.
9-941]
gi|82700865|ref|YP_415439.1| hypothetical protein BAB1_2114 [Brucella melitensis biovar Abortus
2308]
gi|189025165|ref|YP_001935933.1| hypothetical protein BAbS19_I19770 [Brucella abortus S19]
gi|237816458|ref|ZP_04595451.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254690244|ref|ZP_05153498.1| hypothetical protein Babob68_08747 [Brucella abortus bv. 6 str.
870]
gi|254694732|ref|ZP_05156560.1| hypothetical protein Babob3T_08743 [Brucella abortus bv. 3 str.
Tulya]
gi|254696361|ref|ZP_05158189.1| hypothetical protein Babob28_01243 [Brucella abortus bv. 2 str.
86/8/59]
gi|254731275|ref|ZP_05189853.1| hypothetical protein Babob42_08765 [Brucella abortus bv. 4 str.
292]
gi|256258497|ref|ZP_05464033.1| hypothetical protein Babob9C_14352 [Brucella abortus bv. 9 str.
C68]
gi|260546216|ref|ZP_05821956.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260755785|ref|ZP_05868133.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260759008|ref|ZP_05871356.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260760733|ref|ZP_05873076.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884809|ref|ZP_05896423.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261215061|ref|ZP_05929342.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297247339|ref|ZP_06931057.1| hypothetical protein BAYG_00239 [Brucella abortus bv. 5 str. B3196]
gi|62197086|gb|AAX75386.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616966|emb|CAJ12070.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|189020737|gb|ACD73459.1| hypothetical protein BAbS19_I19770 [Brucella abortus S19]
gi|237788525|gb|EEP62740.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260096323|gb|EEW80199.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260669326|gb|EEX56266.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671165|gb|EEX57986.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675893|gb|EEX62714.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260874337|gb|EEX81406.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260916668|gb|EEX83529.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297174508|gb|EFH33855.1| hypothetical protein BAYG_00239 [Brucella abortus bv. 5 str. B3196]
Length = 211
Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 54/176 (30%), Gaps = 29/176 (16%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ +II+ LG+ P R+ E + +I +G
Sbjct: 20 DLLEGADIIIGLGS---YDP---------------RVAERAS---DLYLEGLAPWLIFTG 58
Query: 121 GDPQKHG----LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+ +E+ + + GV I +E + + +N +FS +
Sbjct: 59 RSGRGTDKLYKASEAEAFAEIAIRRGVPERAIIIEPNATNIGENIRFSREKLAWDAVSG- 117
Query: 177 ILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
I V+ +R +AS S L ++ + E+ + E G
Sbjct: 118 IFVTKPQTQRRVHATMLRQWPEARASISAPLVSFEE---QPTAEFPLEMLIHEMTG 170
>gi|317491318|ref|ZP_07949754.1| hypothetical protein HMPREF0864_00517 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920865|gb|EFV42188.1| hypothetical protein HMPREF0864_00517 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 248
Score = 49.9 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 20/189 (10%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
R I+ + +L + G+ I K + Y+ P + V+LG +
Sbjct: 2 WRRLIYGILTVAILLAVTAIGLDRWISWKTAPYIYEEVQDLPHRQVG----VVLGTAKYV 57
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
RI + Y S K + +++SG + E + L
Sbjct: 58 STGTINQYYR------YRIQGALNAYNSNKVNY----LLLSGDNA-LESYNEPVTMRRDL 106
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ +GV DI L+ T + + + + +++ +H +R+ H GI
Sbjct: 107 ITAGVPSGDIVLDYAGFRTLDSIVRTRKVFD---TNDFTIITQRFHCERALFIALHMGIQ 163
Query: 199 TK--ASCSD 205
+ A S
Sbjct: 164 AQCLAVPSP 172
>gi|52142030|ref|YP_084799.1| group-specific protein [Bacillus cereus E33L]
gi|51975499|gb|AAU17049.1| group-specific protein [Bacillus cereus E33L]
Length = 183
Score = 49.9 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ ++I + G P P + Y+ + II++GG
Sbjct: 43 PQKCDVIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNKIIVTGGT 81
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+++ V NKL+E GV +D I E SL + N + + +
Sbjct: 82 SLHGMKHPSWNYGDLSDAEVIVNKLMEHGVPKDAIIFEKNSLHSIANVMEAKKIFDFTKI 141
Query: 174 KNIILV 179
++ V
Sbjct: 142 NRLLFV 147
>gi|332764398|gb|EGJ94632.1| protein ydcF domain protein [Shigella flexneri K-671]
Length = 164
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKRSQLYFQHF-G 196
+ + I +E QS + +NA+FS +++ + I+V +R+ F+ G
Sbjct: 7 FWHIPHEKIWIEDQSANCGENARFSITLLNQAVERVHTAIVVQDPTMQRRTMATFRRMTG 66
Query: 197 INTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGI 233
N + +Y +P N + + + + G+
Sbjct: 67 DNPD---APRWLSYPGFVPQLGNNADSVIFINQLQGL 100
>gi|300717554|ref|YP_003742357.1| hypothetical protein [Erwinia billingiae Eb661]
gi|299063390|emb|CAX60510.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
Length = 288
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 67/192 (34%), Gaps = 22/192 (11%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R I+ + + L G+ + K + Y+ P + V+LG
Sbjct: 4 RLIYGLIIIITLMVLTALGLDRWMSWKTAPYIYENLKSLPHRQVG----VVLGTAKYYRG 59
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
R+ + Y S K + +++SG + H E + L+
Sbjct: 60 GGINQYY------LYRMQGALNAYNSGKVNY----LLLSGDNA-LHSYNEPMTMRKDLIA 108
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+GV+ DI L+ T + + + + I+++ +H +R+ H GI +
Sbjct: 109 AGVDPADIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQ 165
Query: 201 ----ASCSDYLN 208
S + LN
Sbjct: 166 CYAVPSPKNMLN 177
>gi|228947123|ref|ZP_04109417.1| hypothetical protein bthur0007_32530 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229123023|ref|ZP_04252230.1| hypothetical protein bcere0016_33140 [Bacillus cereus 95/8201]
gi|228660317|gb|EEL15950.1| hypothetical protein bcere0016_33140 [Bacillus cereus 95/8201]
gi|228812370|gb|EEM58697.1| hypothetical protein bthur0007_32530 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 225
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ ++I + G P P + Y+ + II++GG
Sbjct: 31 PQKCDVIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNRIIVTGGT 69
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+E+ V NKL+E+GV + I E SL + N + + +
Sbjct: 70 SLHGMKHPSWNYGDLSEAEVIVNKLMENGVPKGAILFEKNSLHSIANVIEAKKIFDFTKI 129
Query: 174 KNIILV 179
++ V
Sbjct: 130 NRLLFV 135
>gi|167632450|ref|ZP_02390777.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|170689062|ref|ZP_02880261.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|254686070|ref|ZP_05149929.1| hypothetical protein BantC_19740 [Bacillus anthracis str.
CNEVA-9066]
gi|254723471|ref|ZP_05185259.1| hypothetical protein BantA1_13469 [Bacillus anthracis str. A1055]
gi|254740707|ref|ZP_05198398.1| hypothetical protein BantKB_06757 [Bacillus anthracis str. Kruger
B]
gi|167532748|gb|EDR95384.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|170666929|gb|EDT17693.1| conserved domain protein [Bacillus anthracis str. A0465]
Length = 225
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ ++I + G P P + Y+ + II++GG
Sbjct: 31 PQKCDVIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNRIIVTGGT 69
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+E+ V NKL+E+GV + I E SL + N + + +
Sbjct: 70 SLHGMKHPSWNYGDLSEAEVIVNKLMENGVPKGAILFEKNSLHSIANVIEAKKIFDFTKI 129
Query: 174 KNIILV 179
++ V
Sbjct: 130 NRLLFV 135
>gi|292488756|ref|YP_003531643.1| protein SanA [Erwinia amylovora CFBP1430]
gi|292899909|ref|YP_003539278.1| exported protein [Erwinia amylovora ATCC 49946]
gi|291199757|emb|CBJ46878.1| putative exported protein [Erwinia amylovora ATCC 49946]
gi|291554190|emb|CBA21424.1| Protein sanA [Erwinia amylovora CFBP1430]
Length = 237
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 26/165 (15%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + R+ + Y S K + +++SG + +
Sbjct: 49 VVLGTAKFYRTGVINQYY------LYRMQGALNAYNSGKVNY----LLLSGDNAR-QSYN 97
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + L+ +GV+ DI L+ T + + + + I+++ +H +R+
Sbjct: 98 EPMTMRRDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERAL 154
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
L H GI + P N + L+E L
Sbjct: 155 LIALHMGIQAQCYAV----------PSPKNMM--SVRLREVAARL 187
>gi|32034567|ref|ZP_00134723.1| COG2949: Uncharacterized membrane protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207926|ref|YP_001053151.1| SanA protein [Actinobacillus pleuropneumoniae L20]
gi|126096718|gb|ABN73546.1| SanA protein [Actinobacillus pleuropneumoniae serovar 5b str. L20]
Length = 229
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 80/228 (35%), Gaps = 29/228 (12%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
S W +I +S ++ I +I +++ + + ++ V
Sbjct: 14 SLWKRCLSICPRIALVSFAIVFLLSITVFVIDYATGIYVKDNIYTDIEKLPKHRNA---V 70
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG P + + R+ ++L K +++SG + + E
Sbjct: 71 VLGTSKFYAKGTPNLYYK------YRLEAAVQLINKGKAK----KLLVSGDNKTPY-YNE 119
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
V N L G+ ++ I+ + T + +S + K + I+VS +H +R+
Sbjct: 120 PKVMLNDLYNMGIPKNMIEQDFAGYRTLDSIVRASKVYK---LEPFIIVSQQFHCERALF 176
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ IN + Y + + L+E++ + +
Sbjct: 177 IAKYHNINAVCFAAKYPEGHIKVR------------LREFLARIGMIW 212
>gi|318604986|emb|CBY26484.1| sana protein [Yersinia enterocolitica subsp. palearctica Y11]
Length = 281
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + H E + L+ +GV DI L+
Sbjct: 69 RIQGALNAYNSGKVSY----LLLSGDNA-LHSYNEPMTMRRDLMAAGVPASDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D LN
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIAMHMGIQAQCFAVPSPKDMLNVRV 180
Query: 212 SII 214
I
Sbjct: 181 REI 183
>gi|229551497|ref|ZP_04440222.1| conserved hypothetical protein [Lactobacillus rhamnosus LMS2-1]
gi|229315147|gb|EEN81120.1| conserved hypothetical protein [Lactobacillus rhamnosus LMS2-1]
Length = 95
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Query: 161 AQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLS 217
+FS +I G+ ++ YHL R+ ++ + GI + +
Sbjct: 1 MRFSKRLIIQEIGEAPYKASFFTNNYHLLRAGIFARMAGIAANGVGGN-----------T 49
Query: 218 ANFYLTELALKEYIGILIAYYR 239
+ ++L ++EY+ +++ Y R
Sbjct: 50 SFYFLPNAVIREYLALVVLYKR 71
>gi|213023249|ref|ZP_03337696.1| hypothetical protein Salmonelentericaenterica_11945 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 261
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 60/173 (34%), Gaps = 21/173 (12%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + RI + Y S K + +++SG +
Sbjct: 49 VVLGTAKYYRKGVINQYYR------YRIQGALNAYNSGKVNY----LLLSGDNA-LQSYN 97
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + L+ +GV+ DI L+ T + + + + I+++ +H +R+
Sbjct: 98 EPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD---INDFIIITQRFHCERAL 154
Query: 190 LYFQHFGINTK----ASCSDYLNAYYS-IIPLSANFYLTELALKE--YIGILI 235
H GI + S + L + + +E ++G L+
Sbjct: 155 FIALHMGIQAQCYAVPSPKNMLTVRLREFGARFSALADLYIFKREPRFLGPLV 207
>gi|228928543|ref|ZP_04091582.1| hypothetical protein bthur0010_32400 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228831148|gb|EEM76746.1| hypothetical protein bthur0010_32400 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 225
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ ++I + G + P P + Y+ + II++GG
Sbjct: 31 PQKCDVIFVFG------DSHPGNWQAP-----------LEAYRQ----GLGNQIIVTGGT 69
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+E+ V NKL+E GV +D I ET SL + N + + +
Sbjct: 70 SLHGMKHPSWNYGDLSEAEVIVNKLMEHGVPKDAIMFETNSLHSIANVMEAKKIFDFTKV 129
Query: 174 KNIILV 179
++ V
Sbjct: 130 NRLLFV 135
>gi|229174161|ref|ZP_04301696.1| hypothetical protein bcere0006_32550 [Bacillus cereus MM3]
gi|228609282|gb|EEK66569.1| hypothetical protein bcere0006_32550 [Bacillus cereus MM3]
Length = 225
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ + I + G P P ++ Y+ + II++GG
Sbjct: 31 PQKCDAIFVFGGSH------PGNWQAP-----------LKAYQQ----GLGNQIIVTGGT 69
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+E+ V NKL+E GV +D I ET SL + N + + +
Sbjct: 70 SLHGMKHPSWNYGELSEAEVIVNKLIEHGVPKDAILFETNSLHSIANVIEAKKIFDFTKI 129
Query: 174 KNIILV 179
++ V
Sbjct: 130 NRLLFV 135
>gi|262275794|ref|ZP_06053603.1| putative SanA protein [Grimontia hollisae CIP 101886]
gi|262219602|gb|EEY70918.1| putative SanA protein [Grimontia hollisae CIP 101886]
Length = 219
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 28/220 (12%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
S+RK FF+ ++ SFI ++ + + + R +I ++LG I
Sbjct: 2 SLRKAFFVIMTFVVASFI---VVAAMDVWVSFQAKDRIFTRVDDTPTRHIGLVLGTSKYI 58
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
T+ RI LY + K +++SG + E +
Sbjct: 59 GKTLNPYYTH-------RIDAAQDLYLNKKVD----VLLLSGDNA-HRSYNEPWTMKRDM 106
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
L++G+ + I L+ T + + + LV+ A+H +R+ + I+
Sbjct: 107 LKAGIPDEKIFLDYAGFRTLDSIIRAKKVFDA---DEFTLVTQAFHCERALFIADFYDID 163
Query: 199 TKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
P ++ +E + + A
Sbjct: 164 AICLAV----------PSPGGMAGVKIRAREALARVKAVL 193
>gi|262042873|ref|ZP_06016020.1| YdcF like protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|259039781|gb|EEW40905.1| YdcF like protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 266
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 37/102 (36%), Gaps = 22/102 (21%)
Query: 115 TIIISGGDPQK-------------------HGLAESIVYNNKLLE-SGVERDDIKLETQS 154
++ISGG G E+ V + + + + +E QS
Sbjct: 64 PLLISGGVGHSTGYLYEAVRQDPRYRTLPVDGRPEAHVLADIAHDYWHIPHSRLVVEDQS 123
Query: 155 LDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ +NA+F+ + +++ + I++ +R+ F
Sbjct: 124 TNCGENARFTRTTLESRGLAYRRGIVIQDPTMQRRTMATFAR 165
>gi|49186304|ref|YP_029556.1| hypothetical protein BAS3299 [Bacillus anthracis str. Sterne]
gi|49180231|gb|AAT55607.1| conserved domain protein [Bacillus anthracis str. Sterne]
Length = 251
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ ++I + G P P + Y+ + II++GG
Sbjct: 57 PQKCDVIFVFGGSH------PGNWQAP-----------LETYRQ----GLGNRIIVTGGT 95
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+E+ V NKL+E+GV + I E SL + N + + +
Sbjct: 96 SLHGMKHPSWNYGDLSEAEVIVNKLMENGVPKGAILFEKNSLHSIANVIEAKKIFDFTKI 155
Query: 174 KNIILV 179
++ V
Sbjct: 156 NRLLFV 161
>gi|30263455|ref|NP_845832.1| hypothetical protein BA_3559 [Bacillus anthracis str. Ames]
gi|47528843|ref|YP_020192.1| hypothetical protein GBAA_3559 [Bacillus anthracis str. 'Ames
Ancestor']
gi|65320783|ref|ZP_00393742.1| COG1434: Uncharacterized conserved protein [Bacillus anthracis str.
A2012]
gi|165872367|ref|ZP_02217003.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167637273|ref|ZP_02395553.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|170708528|ref|ZP_02898969.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|177654643|ref|ZP_02936467.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190565091|ref|ZP_03018012.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|227813668|ref|YP_002813677.1| hypothetical protein BAMEG_1072 [Bacillus anthracis str. CDC 684]
gi|229600735|ref|YP_002867703.1| hypothetical protein BAA_3589 [Bacillus anthracis str. A0248]
gi|254738542|ref|ZP_05196245.1| hypothetical protein BantWNA_25554 [Bacillus anthracis str. Western
North America USA6153]
gi|254752860|ref|ZP_05204896.1| hypothetical protein BantV_10331 [Bacillus anthracis str. Vollum]
gi|254759132|ref|ZP_05211158.1| hypothetical protein BantA9_12571 [Bacillus anthracis str.
Australia 94]
gi|30258090|gb|AAP27318.1| conserved domain protein [Bacillus anthracis str. Ames]
gi|47503991|gb|AAT32667.1| conserved domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|164711920|gb|EDR17461.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167514780|gb|EDR90146.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|170126530|gb|EDS95416.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|172080608|gb|EDT65692.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190564408|gb|EDV18372.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|227007595|gb|ACP17338.1| conserved domain protein [Bacillus anthracis str. CDC 684]
gi|229265143|gb|ACQ46780.1| conserved domain protein [Bacillus anthracis str. A0248]
Length = 225
Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ ++I + G P P + Y+ + II++GG
Sbjct: 31 PQKCDVIFVFGGSH------PGNWQAP-----------LETYRQ----GLGNRIIVTGGT 69
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+E+ V NKL+E+GV + I E SL + N + + +
Sbjct: 70 SLHGMKHPSWNYGDLSEAEVIVNKLMENGVPKGAILFEKNSLHSIANVIEAKKIFDFTKI 129
Query: 174 KNIILV 179
++ V
Sbjct: 130 NRLLFV 135
>gi|312172909|emb|CBX81165.1| Protein sanA [Erwinia amylovora ATCC BAA-2158]
Length = 237
Score = 49.5 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 26/165 (15%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + R+ + Y S K + +++SG + +
Sbjct: 49 VVLGTAKFYRTGVINQYY------LYRMQGALNAYNSGKVNY----LLLSGDNAR-QSYN 97
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + L+ +GV+ DI L+ T + + + + I+++ +H +R+
Sbjct: 98 EPMTMRRDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERAL 154
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
L H GI + P N + L+E L
Sbjct: 155 LIALHMGIQAQCYAV----------PSPKNMM--SVRLREVAARL 187
>gi|283832427|ref|ZP_06352168.1| protein SanA [Citrobacter youngae ATCC 29220]
gi|291072081|gb|EFE10190.1| protein SanA [Citrobacter youngae ATCC 29220]
Length = 239
Score = 49.5 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 57/147 (38%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + Q++ E + L+ +GV+ DI L+
Sbjct: 69 RIQGALNAYNSGKVNY----LLLSGDNAQQN-YNEPMTMRKDLIAAGVDPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLTVRV 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 181 REFGARFGALADLYIFKREPRFLGPLV 207
>gi|118580859|ref|YP_902109.1| hypothetical protein Ppro_2446 [Pelobacter propionicus DSM 2379]
gi|118503569|gb|ABL00052.1| protein of unknown function DUF218 [Pelobacter propionicus DSM
2379]
Length = 206
Score = 49.5 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 77/226 (34%), Gaps = 37/226 (16%)
Query: 18 QSIRKIFFMSCFML-LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ +R +F ++ L L +F + L L G+ +L G
Sbjct: 7 RYVRWLFIVAALWLILVAFPSVPSVRAWLAAPLVVQ--------NMHARGDACYVLAGGG 58
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD---PQKHGLAESIV 133
+ + R+ L + + + S G + + +
Sbjct: 59 AL---------------WERLDAAADLVQMGRVPLILLMRDDSRGQYRFTARTSWSRTQW 103
Query: 134 YNNKLLESGVERDDIKLE---TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ L GV ++ I L +L T A+ + + K+++LVSSA H++R+ L
Sbjct: 104 AVDYLAWRGVPKERIVLLSPVEGALGTLAEARAVARHLSKQ-VKSLVLVSSAPHMRRTVL 162
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
F+ + S + + + S Y EY+ +L+
Sbjct: 163 AFRR----SLPSAVGVIPYAATSLENSFELYHP--IWLEYLKLLVY 202
>gi|17229232|ref|NP_485780.1| hypothetical protein alr1740 [Nostoc sp. PCC 7120]
gi|17130830|dbj|BAB73439.1| alr1740 [Nostoc sp. PCC 7120]
Length = 132
Score = 49.5 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ ++ LE + TF+N + ++K + L++S HL R++ Q
Sbjct: 3 DLSNVWLEKCANSTFENFYYGVPILKRWGVHKVRLITSPTHLPRAKWMAQ 52
>gi|27380972|ref|NP_772501.1| hypothetical protein bll5861 [Bradyrhizobium japonicum USDA 110]
gi|27354138|dbj|BAC51126.1| bll5861 [Bradyrhizobium japonicum USDA 110]
Length = 207
Score = 49.5 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 8/100 (8%)
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
+ R RL++ I+SGG +E + ++ +G+ D I E
Sbjct: 51 DTALRADTAARLWREGLFRWS----IVSGGVTPGSEQSECTIIKAAMVAAGIPADRILEE 106
Query: 152 TQSLDTFQNAQFSSSMIKN----MQGKNIILVSSAYHLKR 187
+ +T +N S +I +++I + + + +R
Sbjct: 107 HGATNTGENVIVSLPVIDAALGLQNIRSVICLGNTWTARR 146
>gi|229061085|ref|ZP_04198436.1| hypothetical protein bcere0026_31760 [Bacillus cereus AH603]
gi|228718168|gb|EEL69806.1| hypothetical protein bcere0026_31760 [Bacillus cereus AH603]
Length = 225
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 50/148 (33%), Gaps = 30/148 (20%)
Query: 41 IPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET 100
+P + K ++ + L + + I + G P P
Sbjct: 9 VPYLTKKQIEEITEIAFLKESTPQQCDAIFVFGGSH------PGNWQAPLHA-------- 54
Query: 101 MRLYKSCKQHSMHCTIIISGG---------DPQKHGLAESIVYNNKLLESGVERDDIKLE 151
QH + II++GG + L+ES V NKL+E GV D I E
Sbjct: 55 -------YQHGLGAQIIVTGGTSLHGMKHPNWNYGELSESEVIVNKLIEHGVPEDAIIFE 107
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILV 179
SL + N + + +++ V
Sbjct: 108 KNSLHSIANVIEAKKIFDFKTINSLLFV 135
>gi|297518574|ref|ZP_06936960.1| hypothetical protein EcolOP_13108 [Escherichia coli OP50]
Length = 210
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV+ DI L+
Sbjct: 40 RIQGAINAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRKDLIAAGVDPSDIVLDYAGF 94
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L+
Sbjct: 95 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRI 151
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 152 REFAARFGALADLYIFKREPRFLGPLV 178
>gi|238894514|ref|YP_002919248.1| hypothetical protein KP1_2507 [Klebsiella pneumoniae NTUH-K2044]
gi|238546830|dbj|BAH63181.1| hypothetical protein KP1_2507 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 266
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 37/102 (36%), Gaps = 22/102 (21%)
Query: 115 TIIISGGDPQK-------------------HGLAESIVYNNKLLE-SGVERDDIKLETQS 154
++ISGG G E+ V + + + + +E QS
Sbjct: 64 PLLISGGVGHSTGYLYEAVRQDPRYRTLPVDGRPEAHVLADIAHDYWHIPHSRLVVEDQS 123
Query: 155 LDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQLYFQH 194
+ +NA+F+ + +++ + I++ +R+ F
Sbjct: 124 TNCGENARFTRTTLESRGLAHRRGIVIQDPTMQRRTMATFAR 165
>gi|330859345|emb|CBX69691.1| protein sanA [Yersinia enterocolitica W22703]
Length = 265
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + H E + L+ +GV DI L+
Sbjct: 69 RIQGALNAYNSGKVSY----LLLSGDNA-LHSYNEPMTMRRDLMAAGVPASDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D LN
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIAMHMGIQAQCFAVPSPKDMLNVRV 180
Query: 212 SII 214
I
Sbjct: 181 REI 183
>gi|123443010|ref|YP_001006985.1| hypothetical protein YE2795 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089971|emb|CAL12828.1| putative exported protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 267
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + H E + L+ +GV DI L+
Sbjct: 69 RIQGALNAYNSGKVSY----LLLSGDNA-LHSYNEPMTMRRDLMAAGVPASDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D LN
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIAMHMGIQAQCFAVPSPKDMLNVRV 180
Query: 212 SII 214
I
Sbjct: 181 REI 183
>gi|119513211|ref|ZP_01632257.1| hypothetical protein N9414_00055 [Nodularia spumigena CCY9414]
gi|119462138|gb|EAW43129.1| hypothetical protein N9414_00055 [Nodularia spumigena CCY9414]
Length = 188
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+ GV + + L+ ++ DT N + +NI L++S YH++RS++
Sbjct: 74 DANRRIFWQYGVSDEKLHLDGRATDTVTNFTTLVEEFADRDLQNIYLITSDYHMRRSRVI 133
Query: 192 FQ----HFGINTKASCSD 205
GI
Sbjct: 134 ASVVLGSQGIVVTPLAVP 151
>gi|322649357|gb|EFY45793.1| hypothetical protein SEEM675_08605 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
Length = 261
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 60/173 (34%), Gaps = 21/173 (12%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + RI + Y S K + +++SG +
Sbjct: 49 VVLGTAKYYRKGVINQYYR------YRIQGALNAYNSGKVNY----LLLSGDNA-LQSYN 97
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + L+ +GV+ DI L+ T + + + + I+++ +H +R+
Sbjct: 98 EPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERAL 154
Query: 190 LYFQHFGINTK----ASCSDYLNAYYS-IIPLSANFYLTELALKE--YIGILI 235
H GI + S + L + + +E ++G L+
Sbjct: 155 FIALHMGIQAQCYAVPSPKNMLTVRLREFGARFSALADLYIFKREPRFLGPLV 207
>gi|225626486|ref|ZP_03784525.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225618143|gb|EEH15186.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 193
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 8/90 (8%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG----LAESIVYNNKLLESGVERDDIKL 150
R+ E + +I +G + +E+ + + GV I +
Sbjct: 18 PRVAERAS---DLYLEGLAPWLIFTGRSGRGTDKLYKASEAEAFAEIAIRRGVPERAIII 74
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
E + + +N +FS + I V+
Sbjct: 75 EPNATNIGENIRFSREKLAWDAVSG-IFVT 103
>gi|303270951|ref|XP_003054837.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462811|gb|EEH60089.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 366
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 66/214 (30%), Gaps = 61/214 (28%)
Query: 50 QFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ 109
Q Y + P + ++ ++LG +P + P + R+ ++L+
Sbjct: 107 QHDYFAVGVDPCSGAEYDVAIVLG-----HDVMPNGDVSPPLAA--RVDAGVKLFCEGTA 159
Query: 110 HSMHCTIIISGGDPQKHGLAES-IVYNNKL------------------------------ 138
++ + SGGDP ++E+ + N+ L
Sbjct: 160 KNLLFSG-ASGGDPAAT-ISEANAMMNHALRRAKALKCERPTTPAFKVDTRLYTRGSFLL 217
Query: 139 ---------------------LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNII 177
L+SG +E S T +NA ++ + +
Sbjct: 218 RDSKGNELRMSERHGGCEGQDLDSGCAPFRWVMEESSTSTRENAIYALTECGKRNWTKVA 277
Query: 178 LVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
+V++ +H R+ F + S N +
Sbjct: 278 VVTNRFHQWRADGAFHVVRVEISPIASGMENDPW 311
>gi|307260919|ref|ZP_07542605.1| hypothetical protein appser12_4900 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306869486|gb|EFN01277.1| hypothetical protein appser12_4900 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 229
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 80/220 (36%), Gaps = 32/220 (14%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
+I +S ++ I +I +++ + + ++ V+LG
Sbjct: 25 RIALVSFGIVFLLSITIFVIDYATGIYVKDNIYTDIEKLPKHRNA---VVLGTSKFYAKG 81
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
P + + R+ ++L K +++SG + + E V N L
Sbjct: 82 TPNLYYK------YRLEAAVQLINKGKAK----KLLVSGDNKTPY-YNEPKVMLNDLYNM 130
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
G+ ++ I+ + T + +S + K + I+VS +H +R+ ++ IN
Sbjct: 131 GIPKNMIEQDFAGYRTLDSIVRASKVYK---LEPFIIVSQQFHCERALFIAKYHNINAVC 187
Query: 202 SCSDYLNAYYSIIPLSANFYLTELALKEY---IGILIAYY 238
+ Y + + L+E+ IG++ +
Sbjct: 188 FAAKYPEGHIKVR------------LREFLARIGMIWDFL 215
>gi|332161106|ref|YP_004297683.1| hypothetical protein YE105_C1484 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665336|gb|ADZ41980.1| hypothetical protein YE105_C1484 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 251
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + H E + L+ +GV DI L+
Sbjct: 69 RIQGALNAYNSGKVSY----LLLSGDNA-LHSYNEPMTMRRDLMAAGVPASDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D LN
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIAMHMGIQAQCFAVPSPKDMLNVRV 180
Query: 212 SII 214
I
Sbjct: 181 REI 183
>gi|323497618|ref|ZP_08102635.1| hypothetical protein VISI1226_22365 [Vibrio sinaloensis DSM 21326]
gi|323317367|gb|EGA70361.1| hypothetical protein VISI1226_22365 [Vibrio sinaloensis DSM 21326]
Length = 258
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 51/154 (33%), Gaps = 19/154 (12%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
Q + ++ V+LG + + RI + LY K +
Sbjct: 52 FTHHQQVTNFDVAVVLGTSKYLGKILNEYYSH-------RIEAAIELYNEGKIDN----F 100
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
++SG + E LL++ V ++I L+ T + + + N
Sbjct: 101 LLSGDNA-HRSYNEPWTMKRDLLKAEVPEENIFLDYAGFRTLDSIVRAKEIFD---TDNF 156
Query: 177 ILVSSAYHLKRSQLYFQHFGIN----TKASCSDY 206
+++S +H +R+ IN + +
Sbjct: 157 LIISQKFHCERALFIANSHHINAKCFAVPGPTKH 190
>gi|251790002|ref|YP_003004723.1| hypothetical protein Dd1591_2403 [Dickeya zeae Ech1591]
gi|247538623|gb|ACT07244.1| protein of unknown function DUF218 [Dickeya zeae Ech1591]
Length = 251
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 57/188 (30%), Gaps = 18/188 (9%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ K F + + + Y Q + V+LG
Sbjct: 1 MWKRLIFGLFATILVLACSAFLLDRCISWRTAPYIY--EDVQDLPPRQVGVVLGTAKYYR 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K +++SG + Q E + L+
Sbjct: 59 TGVINQYY------LFRIQGALNAYNSGKVSY----LLLSGDNAQ-QSYNEPMTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+GV +I L+ T + + + + +++ +H +R+ H GI
Sbjct: 108 AAGVPPANIVLDYAGFRTLDSIVRTRKVFD---TNDFTIITQRFHCERALFIALHKGIQA 164
Query: 200 K--ASCSD 205
+ A S
Sbjct: 165 QCFAVPSP 172
>gi|149185075|ref|ZP_01863392.1| hypothetical protein ED21_18517 [Erythrobacter sp. SD-21]
gi|148831186|gb|EDL49620.1| hypothetical protein ED21_18517 [Erythrobacter sp. SD-21]
Length = 201
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 64/169 (37%), Gaps = 44/169 (26%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
++ + F F+G+ + L +P K + + +++L G
Sbjct: 4 RLLAAIFLVYAFGFLGFAMT---------------LPAPAAKTETDAVIVLTGG------ 42
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ--KHGLAESIVYNNKLL 139
RI + + + M +SG DP+ + AE +++L+
Sbjct: 43 ------------PGRIARGLEVVEQNMAKEM----FVSGVDPEVKPNEFAEQFEVSSRLM 86
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+ V + ++T+S NA + +K + + LV++ +H+ R+
Sbjct: 87 DCCVTLGYLAVDTRS-----NAGEVAQWMKEKEFTSARLVTTNWHMARA 130
>gi|254423350|ref|ZP_05037068.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196190839|gb|EDX85803.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 234
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 59/176 (33%), Gaps = 38/176 (21%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
Q + ++ S I G+I L YQ+ L+P + ++LG
Sbjct: 41 QRAGRFLDRLSVLIWISVISAGVIA---LTSAYTRYQQQFLTPP------VALVLGG--- 88
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+ R + K+ + I SG +P
Sbjct: 89 ---------------APERERFAAQFAKTHPTVEIW---ISSGSNP--------EYAQWI 122
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
E+ + + L+ +++DT N + + + L++S YH++R+ + Q
Sbjct: 123 FDEAQIPSEQWSLDYEAVDTVTNFTTLVDELDAQNIREVYLITSDYHMRRASIIAQ 178
>gi|256422998|ref|YP_003123651.1| hypothetical protein Cpin_3988 [Chitinophaga pinensis DSM 2588]
gi|256037906|gb|ACU61450.1| protein of unknown function DUF218 [Chitinophaga pinensis DSM 2588]
Length = 433
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 48/121 (39%), Gaps = 16/121 (13%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD--PQKH 126
I++ G+G P P ++ R +Y + II+SGG P K
Sbjct: 272 IMVPGSG----PGKPGKTMD--TMGMYRCGLAADMY----NKGVAPFIIVSGGHVHPYKT 321
Query: 127 GLAESIVYNNKLL-ESGVERDDIKLETQSLDTFQNAQFS---SSMIKNMQGKNIILVSSA 182
E++ ++ + G+ + +E + T N + + + + K +++VS +
Sbjct: 322 PFCEAVEMKKYMVSKLGIPDSAVIIEPHARHTTTNIRNAVRLAYLFNMPAAKPMLIVSDS 381
Query: 183 Y 183
+
Sbjct: 382 F 382
>gi|237732197|ref|ZP_04562678.1| vancomycin sensitivity protein [Citrobacter sp. 30_2]
gi|226907736|gb|EEH93654.1| vancomycin sensitivity protein [Citrobacter sp. 30_2]
Length = 239
Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + Q E + L+ +GV+ DI L+
Sbjct: 69 RIQGALNAYNSGKVNY----LLLSGDNAQ-QSYNEPMTMRKDLIAAGVDPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLTVRV 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 181 REFGARFGALADLYIFKREPRFLGPLV 207
>gi|213586757|ref|ZP_03368583.1| hypothetical protein SentesTyph_37945 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 213
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 60/173 (34%), Gaps = 21/173 (12%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + RI + Y S K + +++SG +
Sbjct: 23 VVLGTAKYYRKGVINQYYR------YRIQGALNAYNSGKVNY----LLLSGDNA-LQSYN 71
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + L+ +GV+ DI L+ T + + + + I+++ +H +R+
Sbjct: 72 EPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD---INDFIIITQRFHCERAL 128
Query: 190 LYFQHFGINTK----ASCSDYLNAYYS-IIPLSANFYLTELALKE--YIGILI 235
H GI + S + L + + +E ++G L+
Sbjct: 129 FIALHMGIQAQCYAVPSPKNMLTVRLREFGARFSALADLYIFKREPRFLGPLV 181
>gi|226364924|ref|YP_002782706.1| hypothetical protein ROP_55140 [Rhodococcus opacus B4]
gi|226243413|dbj|BAH53761.1| hypothetical protein [Rhodococcus opacus B4]
Length = 185
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/181 (13%), Positives = 52/181 (28%), Gaps = 35/181 (19%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
+ + + I++LG R + L + +
Sbjct: 28 FLYSKSHVDPMRPVDAIIVLGG-----------------DRDGREEYGIELAREGFSTN- 69
Query: 113 HCTIIIS--GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
+++S + + + + + V Q T A F+ +
Sbjct: 70 ---VVLSHPYWKGDRKMAEFCAIQDQRFTVTCVPP-------QPRTTRGEALFTRDLAAQ 119
Query: 171 MQGKNIILVSSAYHLKRSQLYFQH--FG-INTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+++++S YHL R++ F G I + DY + Y T +
Sbjct: 120 HGWTSVLVISWRYHLPRARYIFSQCFEGEIVMRPVPRDYDFSVAHW--EYIYLYQTVAFV 177
Query: 228 K 228
K
Sbjct: 178 K 178
>gi|194427136|ref|ZP_03059687.1| protein SanA [Escherichia coli B171]
gi|194414757|gb|EDX31028.1| protein SanA [Escherichia coli B171]
gi|323161771|gb|EFZ47652.1| sanA [Escherichia coli E128010]
Length = 239
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV+ DI L+
Sbjct: 69 RIQGAINAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRKDLIAAGVDPSDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRI 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 181 REFAARFGALADLYIFKREPRFLGPLV 207
>gi|254409604|ref|ZP_05023385.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196183601|gb|EDX78584.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 198
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/200 (13%), Positives = 60/200 (30%), Gaps = 51/200 (25%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ +R + ++ + + F G+ I + L++ I
Sbjct: 6 YLFSRSRRSKVRLLSWLMPILAVSLFCGYKQIQSYLIQP------------------EAI 47
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG R + I +S G P +
Sbjct: 48 LVLGG------------------EEERELFAADFAQQH----PDLHIWVSSGSPSWYTE- 84
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
++G+ R+ + ++ ++ DT N +K + L+++ H+ R++
Sbjct: 85 ------KVFAKAGIPRNHLHIDRRATDTVTNFTTLVDELKAQGIDGVYLITADDHMLRAR 138
Query: 190 ----LYFQHFGINTKASCSD 205
+ F GI K
Sbjct: 139 VIGEIVFGSRGITLKPVPVS 158
>gi|301024366|ref|ZP_07188055.1| protein SanA [Escherichia coli MS 196-1]
gi|299880463|gb|EFI88674.1| protein SanA [Escherichia coli MS 196-1]
Length = 235
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV+ DI L+
Sbjct: 65 RIQGAINAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRKDLIAAGVDPSDIVLDYAGF 119
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L+
Sbjct: 120 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRI 176
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 177 REFAARFGALADLYIFKREPRFLGPLV 203
>gi|49478260|ref|YP_037591.1| hypothetical protein BT9727_3269 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49329816|gb|AAT60462.1| hypothetical protein BT9727_3269 [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 251
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ ++I + G P+ P + Y+ + II++GG
Sbjct: 57 PQKCDVIFVFGGSH------PSNWQAP-----------LEAYRQ----GLGNRIIVTGGT 95
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+E+ V NKL+E+GV + I E SL + N + + +
Sbjct: 96 SLHGMKHPSWNYGDLSEAEVIVNKLMENGVPKGAILFEKNSLHSIANVIEAKKIFDFTKI 155
Query: 174 KNIILV 179
++ V
Sbjct: 156 NRLLFV 161
>gi|229197618|ref|ZP_04324340.1| hypothetical protein bcere0001_31580 [Bacillus cereus m1293]
gi|228585858|gb|EEK43954.1| hypothetical protein bcere0001_31580 [Bacillus cereus m1293]
Length = 225
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ + I + G P P + Y+ + II++GG
Sbjct: 31 PQKCDAIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNKIIVTGGT 69
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+++ V NKLLE GV +D I E SL + N + + +
Sbjct: 70 SLHGMKHPSWNYGDLSDAEVIVNKLLEHGVPKDAILFEKNSLHSIANVMEAKKIFDFTKI 129
Query: 174 KNIILV 179
++ V
Sbjct: 130 NQLLFV 135
>gi|188587339|ref|YP_001918884.1| protein of unknown function DUF218 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179352026|gb|ACB86296.1| protein of unknown function DUF218 [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 230
Score = 48.7 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/232 (17%), Positives = 85/232 (36%), Gaps = 56/232 (24%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+L I W + T + K L + ++DG+ I++L G
Sbjct: 27 AILILTIFWDNLLTAIGKFL-------VAEEPLERDGSYILVLQGGIP------------ 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGG--------DPQKHGLAESIVYNNKLLES 141
RI + L++ ++ + ++ S Q + + + ++
Sbjct: 68 -----DRIAHGVELHQD--NYAENILMVESKSFTNYELMEQKQLDLPSSAEINKQAAMQM 120
Query: 142 GVERDDI-KLETQSLDTFQNAQFSSSMI----KNMQGKNIILVSSAYHLKRSQLYFQHF- 195
G++ D I + + T Q A + + + + +ILV+S YH KR++L Q
Sbjct: 121 GIDDDQINIIPGKVDSTQQEAGKVAQYLSSNYHSEEDLKVILVTSRYHSKRAKLILQTEL 180
Query: 196 ------GINTKASCSD----YLNAYYSIIPLSANFYLTELALKEYIGILIAY 237
I+ +S S Y + ++ + N ++ EY+ ++ Y
Sbjct: 181 KEHDLTNIDIVSSPSHYDPYYPDEWWKNRRQARNTFM------EYLKLINFY 226
>gi|332092637|gb|EGI97708.1| sanA [Shigella dysenteriae 155-74]
Length = 235
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV+ DI L+
Sbjct: 65 RIQGAINAYNSGKINY----LLLSGDNA-LQSYNEPMTMRKDLIAAGVDPSDIVLDYAGF 119
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L+
Sbjct: 120 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRI 176
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 177 REFAARFGALADLYIFKREPRFLGPLV 203
>gi|323968068|gb|EGB63478.1| hypothetical protein ERJG_00588 [Escherichia coli M863]
gi|323977662|gb|EGB72748.1| hypothetical protein ERFG_01184 [Escherichia coli TW10509]
gi|327252382|gb|EGE64041.1| sanA [Escherichia coli STEC_7v]
Length = 239
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 54/147 (36%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E L+ +GV+ DI L+
Sbjct: 69 RIQGAINAYNSGKVNY----LLLSGDNA-LQSYNEPKTMRKDLIAAGVDPSDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRI 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 181 REFAARFGALADLYIFKREPRFLGPLV 207
>gi|2570211|emb|CAA05289.1| Sfi protein [Salmonella typhimurium]
Length = 187
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 51/146 (34%), Gaps = 14/146 (9%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + RI + Y S K + +++SG +
Sbjct: 49 VVLGTAKYYRKGVINQYYR------YRIQGALNAYNSGKVNY----LLLSGDNA-LQSYY 97
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E I L+ +GV+ DI L+ T + + + + I+++ +H +R+
Sbjct: 98 EPITMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERAL 154
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIP 215
H GI + + Y P
Sbjct: 155 FIALHMGIQAQCYRGTFTQKYADSAP 180
>gi|15802700|ref|NP_288727.1| hypothetical protein Z3399 [Escherichia coli O157:H7 EDL933]
gi|15832290|ref|NP_311063.1| hypothetical protein ECs3036 [Escherichia coli O157:H7 str. Sakai]
gi|16130082|ref|NP_416649.1| vancomycin high temperature exclusion protein; mutants have a
defective envelope more permeable to vancomycin at 42
degrees [Escherichia coli str. K-12 substr. MG1655]
gi|26248525|ref|NP_754565.1| hypothetical protein c2677 [Escherichia coli CFT073]
gi|56480052|ref|NP_708044.2| hypothetical protein SF2229 [Shigella flexneri 2a str. 301]
gi|82543535|ref|YP_407482.1| hypothetical protein SBO_0997 [Shigella boydii Sb227]
gi|82777373|ref|YP_403722.1| hypothetical protein SDY_2143 [Shigella dysenteriae Sd197]
gi|89108961|ref|AP_002741.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
gi|91211430|ref|YP_541416.1| hypothetical protein UTI89_C2417 [Escherichia coli UTI89]
gi|110642353|ref|YP_670083.1| hypothetical protein ECP_2183 [Escherichia coli 536]
gi|110806121|ref|YP_689641.1| hypothetical protein SFV_2219 [Shigella flexneri 5 str. 8401]
gi|117624346|ref|YP_853259.1| hypothetical protein APECO1_4406 [Escherichia coli APEC O1]
gi|157156428|ref|YP_001463495.1| hypothetical protein EcE24377A_2439 [Escherichia coli E24377A]
gi|157161624|ref|YP_001458942.1| hypothetical protein EcHS_A2278 [Escherichia coli HS]
gi|168750524|ref|ZP_02775546.1| protein SanA [Escherichia coli O157:H7 str. EC4113]
gi|168757726|ref|ZP_02782733.1| protein SanA [Escherichia coli O157:H7 str. EC4401]
gi|168763800|ref|ZP_02788807.1| protein SanA [Escherichia coli O157:H7 str. EC4501]
gi|168767757|ref|ZP_02792764.1| protein SanA [Escherichia coli O157:H7 str. EC4486]
gi|168773145|ref|ZP_02798152.1| protein SanA [Escherichia coli O157:H7 str. EC4196]
gi|168779987|ref|ZP_02804994.1| protein SanA [Escherichia coli O157:H7 str. EC4076]
gi|168788954|ref|ZP_02813961.1| protein SanA [Escherichia coli O157:H7 str. EC869]
gi|168801167|ref|ZP_02826174.1| protein SanA [Escherichia coli O157:H7 str. EC508]
gi|170019539|ref|YP_001724493.1| hypothetical protein EcolC_1504 [Escherichia coli ATCC 8739]
gi|170081767|ref|YP_001731087.1| hypothetical protein ECDH10B_2301 [Escherichia coli str. K-12
substr. DH10B]
gi|170683493|ref|YP_001744338.1| hypothetical protein EcSMS35_2291 [Escherichia coli SMS-3-5]
gi|188493447|ref|ZP_03000717.1| sanA protein [Escherichia coli 53638]
gi|191165351|ref|ZP_03027193.1| protein SanA [Escherichia coli B7A]
gi|191170117|ref|ZP_03031671.1| protein SanA [Escherichia coli F11]
gi|193062236|ref|ZP_03043331.1| protein SanA [Escherichia coli E22]
gi|193071089|ref|ZP_03052015.1| protein SanA [Escherichia coli E110019]
gi|194436045|ref|ZP_03068147.1| protein SanA [Escherichia coli 101-1]
gi|195935520|ref|ZP_03080902.1| hypothetical protein EscherichcoliO157_03527 [Escherichia coli
O157:H7 str. EC4024]
gi|208809602|ref|ZP_03251939.1| protein SanA [Escherichia coli O157:H7 str. EC4206]
gi|208812329|ref|ZP_03253658.1| protein SanA [Escherichia coli O157:H7 str. EC4045]
gi|208821654|ref|ZP_03261974.1| protein SanA [Escherichia coli O157:H7 str. EC4042]
gi|209395911|ref|YP_002271553.1| protein SanA [Escherichia coli O157:H7 str. EC4115]
gi|209919602|ref|YP_002293686.1| hypothetical protein ECSE_2411 [Escherichia coli SE11]
gi|215487365|ref|YP_002329796.1| hypothetical protein E2348C_2290 [Escherichia coli O127:H6 str.
E2348/69]
gi|217327663|ref|ZP_03443746.1| protein SanA [Escherichia coli O157:H7 str. TW14588]
gi|218559062|ref|YP_002391975.1| hypothetical protein ECS88_2290 [Escherichia coli S88]
gi|218690293|ref|YP_002398505.1| hypothetical protein ECED1_2591 [Escherichia coli ED1a]
gi|218695755|ref|YP_002403422.1| hypothetical protein EC55989_2394 [Escherichia coli 55989]
gi|218700616|ref|YP_002408245.1| hypothetical protein ECIAI39_2283 [Escherichia coli IAI39]
gi|218705672|ref|YP_002413191.1| hypothetical protein ECUMN_2477 [Escherichia coli UMN026]
gi|227887199|ref|ZP_04005004.1| membrane protein [Escherichia coli 83972]
gi|237704609|ref|ZP_04535090.1| vancomycin sensitivity [Escherichia sp. 3_2_53FAA]
gi|238901326|ref|YP_002927122.1| hypothetical protein BWG_1926 [Escherichia coli BW2952]
gi|253772929|ref|YP_003035760.1| hypothetical protein ECBD_1514 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162158|ref|YP_003045266.1| hypothetical protein ECB_02073 [Escherichia coli B str. REL606]
gi|254794043|ref|YP_003078880.1| hypothetical protein ECSP_3022 [Escherichia coli O157:H7 str.
TW14359]
gi|256017688|ref|ZP_05431553.1| hypothetical protein ShiD9_02145 [Shigella sp. D9]
gi|256022172|ref|ZP_05436037.1| hypothetical protein E4_02262 [Escherichia sp. 4_1_40B]
gi|260844750|ref|YP_003222528.1| hypothetical protein ECO103_2619 [Escherichia coli O103:H2 str.
12009]
gi|260856117|ref|YP_003230008.1| hypothetical protein ECO26_3056 [Escherichia coli O26:H11 str.
11368]
gi|260868846|ref|YP_003235248.1| hypothetical protein ECO111_2861 [Escherichia coli O111:H- str.
11128]
gi|261223397|ref|ZP_05937678.1| hypothetical protein EscherichiacoliO157_02144 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261259053|ref|ZP_05951586.1| hypothetical protein EscherichiacoliO157EcO_25092 [Escherichia coli
O157:H7 str. FRIK966]
gi|291283398|ref|YP_003500216.1| hypothetical protein G2583_2687 [Escherichia coli O55:H7 str.
CB9615]
gi|293405612|ref|ZP_06649604.1| hypothetical protein ECGG_00963 [Escherichia coli FVEC1412]
gi|293410503|ref|ZP_06654079.1| hypothetical protein ECEG_01467 [Escherichia coli B354]
gi|293415427|ref|ZP_06658070.1| hypothetical protein ECDG_01989 [Escherichia coli B185]
gi|293446494|ref|ZP_06662916.1| hypothetical protein ECCG_00642 [Escherichia coli B088]
gi|298381293|ref|ZP_06990892.1| hypothetical protein ECFG_01022 [Escherichia coli FVEC1302]
gi|300822589|ref|ZP_07102727.1| protein SanA [Escherichia coli MS 119-7]
gi|300897800|ref|ZP_07116193.1| protein SanA [Escherichia coli MS 198-1]
gi|300902207|ref|ZP_07120207.1| protein SanA [Escherichia coli MS 84-1]
gi|300918784|ref|ZP_07135353.1| protein SanA [Escherichia coli MS 115-1]
gi|300926246|ref|ZP_07142049.1| protein SanA [Escherichia coli MS 182-1]
gi|300930373|ref|ZP_07145782.1| protein SanA [Escherichia coli MS 187-1]
gi|300935066|ref|ZP_07150097.1| protein SanA [Escherichia coli MS 21-1]
gi|300950097|ref|ZP_07164044.1| protein SanA [Escherichia coli MS 116-1]
gi|300955834|ref|ZP_07168175.1| protein SanA [Escherichia coli MS 175-1]
gi|300981481|ref|ZP_07175562.1| protein SanA [Escherichia coli MS 200-1]
gi|300982858|ref|ZP_07176322.1| protein SanA [Escherichia coli MS 45-1]
gi|301021091|ref|ZP_07185132.1| protein SanA [Escherichia coli MS 69-1]
gi|301048880|ref|ZP_07195873.1| protein SanA [Escherichia coli MS 185-1]
gi|301306538|ref|ZP_07212602.1| protein SanA [Escherichia coli MS 124-1]
gi|301328623|ref|ZP_07221684.1| protein SanA [Escherichia coli MS 78-1]
gi|301644161|ref|ZP_07244169.1| protein SanA [Escherichia coli MS 146-1]
gi|306814741|ref|ZP_07448903.1| hypothetical protein ECNC101_21907 [Escherichia coli NC101]
gi|307138803|ref|ZP_07498159.1| hypothetical protein EcolH7_11856 [Escherichia coli H736]
gi|307311277|ref|ZP_07590921.1| protein of unknown function DUF218 [Escherichia coli W]
gi|309788027|ref|ZP_07682636.1| sanA [Shigella dysenteriae 1617]
gi|309793022|ref|ZP_07687450.1| protein SanA [Escherichia coli MS 145-7]
gi|312967437|ref|ZP_07781652.1| sanA [Escherichia coli 2362-75]
gi|312973607|ref|ZP_07787779.1| sanA [Escherichia coli 1827-70]
gi|331642769|ref|ZP_08343904.1| protein SanA [Escherichia coli H736]
gi|331647795|ref|ZP_08348887.1| protein SanA [Escherichia coli M605]
gi|331653573|ref|ZP_08354574.1| protein SanA [Escherichia coli M718]
gi|331658223|ref|ZP_08359185.1| protein SanA [Escherichia coli TA206]
gi|331663646|ref|ZP_08364556.1| protein SanA [Escherichia coli TA143]
gi|331668843|ref|ZP_08369691.1| protein SanA [Escherichia coli TA271]
gi|331673672|ref|ZP_08374435.1| protein SanA [Escherichia coli TA280]
gi|331678092|ref|ZP_08378767.1| protein SanA [Escherichia coli H591]
gi|331683821|ref|ZP_08384417.1| protein SanA [Escherichia coli H299]
gi|332278702|ref|ZP_08391115.1| vancomycin sensitivity protein [Shigella sp. D9]
gi|84028417|sp|P0AFY4|SANA_ECO57 RecName: Full=Protein sanA
gi|84028418|sp|P0AFY3|SANA_ECOL6 RecName: Full=Protein sanA
gi|84028419|sp|P0AFY2|SANA_ECOLI RecName: Full=Protein sanA
gi|84028420|sp|P0AFY5|SANA_SHIFL RecName: Full=Protein sanA
gi|12516461|gb|AAG57282.1|AE005446_10 vancomycin sensitivity [Escherichia coli O157:H7 str. EDL933]
gi|26108930|gb|AAN81133.1|AE016763_92 SanA protein [Escherichia coli CFT073]
gi|1788466|gb|AAC75205.1| vancomycin high temperature exclusion protein; mutants have a
defective envelope more permeable to vancomycin at 42
degrees [Escherichia coli str. K-12 substr. MG1655]
gi|13362505|dbj|BAB36459.1| vancomycin sensitivity [Escherichia coli O157:H7 str. Sakai]
gi|56383603|gb|AAN43751.2| vancomycin resistance protein [Shigella flexneri 2a str. 301]
gi|81241521|gb|ABB62231.1| vancomycin sensitivity [Shigella dysenteriae Sd197]
gi|81244946|gb|ABB65654.1| vancomycin sensitivity [Shigella boydii Sb227]
gi|85675258|dbj|BAE76621.1| hypothetical protein [Escherichia coli str. K12 substr. W3110]
gi|91073004|gb|ABE07885.1| SanA protein [Escherichia coli UTI89]
gi|110343945|gb|ABG70182.1| vancomycin resistance SanA protein [Escherichia coli 536]
gi|110615669|gb|ABF04336.1| vancomycin sensitivity [Shigella flexneri 5 str. 8401]
gi|115513470|gb|ABJ01545.1| putative vancomycin sensitivity protein [Escherichia coli APEC O1]
gi|157067304|gb|ABV06559.1| protein SanA [Escherichia coli HS]
gi|157078458|gb|ABV18166.1| protein SanA [Escherichia coli E24377A]
gi|169754467|gb|ACA77166.1| protein of unknown function DUF218 [Escherichia coli ATCC 8739]
gi|169889602|gb|ACB03309.1| predicted protein [Escherichia coli str. K-12 substr. DH10B]
gi|170521211|gb|ACB19389.1| protein SanA [Escherichia coli SMS-3-5]
gi|187771031|gb|EDU34875.1| protein SanA [Escherichia coli O157:H7 str. EC4196]
gi|188015314|gb|EDU53436.1| protein SanA [Escherichia coli O157:H7 str. EC4113]
gi|188488646|gb|EDU63749.1| sanA protein [Escherichia coli 53638]
gi|189001931|gb|EDU70917.1| protein SanA [Escherichia coli O157:H7 str. EC4076]
gi|189355324|gb|EDU73743.1| protein SanA [Escherichia coli O157:H7 str. EC4401]
gi|189362843|gb|EDU81262.1| protein SanA [Escherichia coli O157:H7 str. EC4486]
gi|189366094|gb|EDU84510.1| protein SanA [Escherichia coli O157:H7 str. EC4501]
gi|189371366|gb|EDU89782.1| protein SanA [Escherichia coli O157:H7 str. EC869]
gi|189376621|gb|EDU95037.1| protein SanA [Escherichia coli O157:H7 str. EC508]
gi|190904514|gb|EDV64221.1| protein SanA [Escherichia coli B7A]
gi|190909633|gb|EDV69218.1| protein SanA [Escherichia coli F11]
gi|192931902|gb|EDV84501.1| protein SanA [Escherichia coli E22]
gi|192955612|gb|EDV86089.1| protein SanA [Escherichia coli E110019]
gi|194424773|gb|EDX40758.1| protein SanA [Escherichia coli 101-1]
gi|208729403|gb|EDZ79004.1| protein SanA [Escherichia coli O157:H7 str. EC4206]
gi|208733606|gb|EDZ82293.1| protein SanA [Escherichia coli O157:H7 str. EC4045]
gi|208741777|gb|EDZ89459.1| protein SanA [Escherichia coli O157:H7 str. EC4042]
gi|209157311|gb|ACI34744.1| protein SanA [Escherichia coli O157:H7 str. EC4115]
gi|209766308|gb|ACI81466.1| vancomycin sensitivity [Escherichia coli]
gi|209766310|gb|ACI81467.1| vancomycin sensitivity [Escherichia coli]
gi|209766312|gb|ACI81468.1| vancomycin sensitivity [Escherichia coli]
gi|209766314|gb|ACI81469.1| vancomycin sensitivity [Escherichia coli]
gi|209766316|gb|ACI81470.1| vancomycin sensitivity [Escherichia coli]
gi|209912861|dbj|BAG77935.1| vancomycin resistance protein [Escherichia coli SE11]
gi|215265437|emb|CAS09838.1| vancomycin sensitivity protein [Escherichia coli O127:H6 str.
E2348/69]
gi|217320030|gb|EEC28455.1| protein SanA [Escherichia coli O157:H7 str. TW14588]
gi|218352487|emb|CAU98264.1| conserved hypothetical protein [Escherichia coli 55989]
gi|218365831|emb|CAR03572.1| conserved hypothetical protein [Escherichia coli S88]
gi|218370602|emb|CAR18409.1| conserved hypothetical protein [Escherichia coli IAI39]
gi|218427857|emb|CAR08772.2| conserved hypothetical protein [Escherichia coli ED1a]
gi|218432769|emb|CAR13663.1| conserved hypothetical protein [Escherichia coli UMN026]
gi|222033905|emb|CAP76646.1| Protein sanA [Escherichia coli LF82]
gi|226900975|gb|EEH87234.1| vancomycin sensitivity [Escherichia sp. 3_2_53FAA]
gi|227835549|gb|EEJ46015.1| membrane protein [Escherichia coli 83972]
gi|238863002|gb|ACR65000.1| predicted protein [Escherichia coli BW2952]
gi|242377786|emb|CAQ32549.1| vancomycin sensitivity [Escherichia coli BL21(DE3)]
gi|253323973|gb|ACT28575.1| protein of unknown function DUF218 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974059|gb|ACT39730.1| hypothetical protein ECB_02073 [Escherichia coli B str. REL606]
gi|253978227|gb|ACT43897.1| hypothetical protein ECD_02073 [Escherichia coli BL21(DE3)]
gi|254593443|gb|ACT72804.1| predicted protein [Escherichia coli O157:H7 str. TW14359]
gi|257754766|dbj|BAI26268.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
gi|257759897|dbj|BAI31394.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
gi|257765202|dbj|BAI36697.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
gi|260448762|gb|ACX39184.1| protein of unknown function DUF218 [Escherichia coli DH1]
gi|281179236|dbj|BAI55566.1| vancomycin resistance protein [Escherichia coli SE15]
gi|281601601|gb|ADA74585.1| Protein sanA [Shigella flexneri 2002017]
gi|284922129|emb|CBG35210.1| putative exported protein [Escherichia coli 042]
gi|290763271|gb|ADD57232.1| hypothetical protein G2583_2687 [Escherichia coli O55:H7 str.
CB9615]
gi|291323324|gb|EFE62752.1| hypothetical protein ECCG_00642 [Escherichia coli B088]
gi|291427820|gb|EFF00847.1| hypothetical protein ECGG_00963 [Escherichia coli FVEC1412]
gi|291433075|gb|EFF06054.1| hypothetical protein ECDG_01989 [Escherichia coli B185]
gi|291470971|gb|EFF13455.1| hypothetical protein ECEG_01467 [Escherichia coli B354]
gi|294491745|gb|ADE90501.1| protein SanA [Escherichia coli IHE3034]
gi|298278735|gb|EFI20249.1| hypothetical protein ECFG_01022 [Escherichia coli FVEC1302]
gi|300299256|gb|EFJ55641.1| protein SanA [Escherichia coli MS 185-1]
gi|300307554|gb|EFJ62074.1| protein SanA [Escherichia coli MS 200-1]
gi|300317301|gb|EFJ67085.1| protein SanA [Escherichia coli MS 175-1]
gi|300358515|gb|EFJ74385.1| protein SanA [Escherichia coli MS 198-1]
gi|300398272|gb|EFJ81810.1| protein SanA [Escherichia coli MS 69-1]
gi|300405726|gb|EFJ89264.1| protein SanA [Escherichia coli MS 84-1]
gi|300408658|gb|EFJ92196.1| protein SanA [Escherichia coli MS 45-1]
gi|300414027|gb|EFJ97337.1| protein SanA [Escherichia coli MS 115-1]
gi|300417675|gb|EFK00986.1| protein SanA [Escherichia coli MS 182-1]
gi|300450587|gb|EFK14207.1| protein SanA [Escherichia coli MS 116-1]
gi|300459647|gb|EFK23140.1| protein SanA [Escherichia coli MS 21-1]
gi|300461695|gb|EFK25188.1| protein SanA [Escherichia coli MS 187-1]
gi|300524789|gb|EFK45858.1| protein SanA [Escherichia coli MS 119-7]
gi|300838239|gb|EFK65999.1| protein SanA [Escherichia coli MS 124-1]
gi|300845015|gb|EFK72775.1| protein SanA [Escherichia coli MS 78-1]
gi|301077459|gb|EFK92265.1| protein SanA [Escherichia coli MS 146-1]
gi|305852135|gb|EFM52587.1| hypothetical protein ECNC101_21907 [Escherichia coli NC101]
gi|306908783|gb|EFN39280.1| protein of unknown function DUF218 [Escherichia coli W]
gi|307554213|gb|ADN46988.1| vancomycin sensitivity SanA protein [Escherichia coli ABU 83972]
gi|307626315|gb|ADN70619.1| hypothetical protein UM146_06070 [Escherichia coli UM146]
gi|308123308|gb|EFO60570.1| protein SanA [Escherichia coli MS 145-7]
gi|308924161|gb|EFP69659.1| sanA [Shigella dysenteriae 1617]
gi|309702457|emb|CBJ01783.1| putative exported protein [Escherichia coli ETEC H10407]
gi|310332202|gb|EFP99437.1| sanA [Escherichia coli 1827-70]
gi|312287634|gb|EFR15539.1| sanA [Escherichia coli 2362-75]
gi|312946762|gb|ADR27589.1| hypothetical protein NRG857_10875 [Escherichia coli O83:H1 str. NRG
857C]
gi|315061453|gb|ADT75780.1| conserved hypothetical protein [Escherichia coli W]
gi|315136777|dbj|BAJ43936.1| hypothetical protein ECDH1ME8569_2080 [Escherichia coli DH1]
gi|315255344|gb|EFU35312.1| protein SanA [Escherichia coli MS 85-1]
gi|315285785|gb|EFU45225.1| protein SanA [Escherichia coli MS 110-3]
gi|315294491|gb|EFU53839.1| protein SanA [Escherichia coli MS 153-1]
gi|315297992|gb|EFU57262.1| protein SanA [Escherichia coli MS 16-3]
gi|315615383|gb|EFU96015.1| sanA [Escherichia coli 3431]
gi|320176617|gb|EFW51659.1| SanA protein [Shigella dysenteriae CDC 74-1112]
gi|320178908|gb|EFW53871.1| SanA protein [Shigella boydii ATCC 9905]
gi|320186773|gb|EFW61495.1| SanA protein [Shigella flexneri CDC 796-83]
gi|320192233|gb|EFW66878.1| SanA protein [Escherichia coli O157:H7 str. EC1212]
gi|320196013|gb|EFW70637.1| SanA protein [Escherichia coli WV_060327]
gi|320641215|gb|EFX10693.1| vancomycin high temperature exclusion protein [Escherichia coli
O157:H7 str. G5101]
gi|320646603|gb|EFX15514.1| vancomycin high temperature exclusion protein [Escherichia coli
O157:H- str. 493-89]
gi|320651858|gb|EFX20233.1| vancomycin high temperature exclusion protein [Escherichia coli
O157:H- str. H 2687]
gi|320657582|gb|EFX25380.1| vancomycin high temperature exclusion protein [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320663188|gb|EFX30497.1| vancomycin high temperature exclusion protein [Escherichia coli
O55:H7 str. USDA 5905]
gi|320667939|gb|EFX34842.1| vancomycin high temperature exclusion protein [Escherichia coli
O157:H7 str. LSU-61]
gi|323152180|gb|EFZ38470.1| sanA [Escherichia coli EPECa14]
gi|323171795|gb|EFZ57439.1| sanA [Escherichia coli LT-68]
gi|323176960|gb|EFZ62550.1| sanA [Escherichia coli 1180]
gi|323188131|gb|EFZ73426.1| sanA [Escherichia coli RN587/1]
gi|323377966|gb|ADX50234.1| protein of unknown function DUF218 [Escherichia coli KO11]
gi|323936758|gb|EGB33043.1| hypothetical protein ERCG_02013 [Escherichia coli E1520]
gi|323940787|gb|EGB36975.1| hypothetical protein ERDG_02564 [Escherichia coli E482]
gi|323944960|gb|EGB41025.1| hypothetical protein EREG_03415 [Escherichia coli H120]
gi|323951940|gb|EGB47814.1| hypothetical protein ERKG_01652 [Escherichia coli H252]
gi|323955909|gb|EGB51662.1| hypothetical protein ERLG_02688 [Escherichia coli H263]
gi|323961608|gb|EGB57214.1| hypothetical protein ERGG_01914 [Escherichia coli H489]
gi|323972974|gb|EGB68171.1| hypothetical protein ERHG_01084 [Escherichia coli TA007]
gi|324006549|gb|EGB75768.1| protein SanA [Escherichia coli MS 57-2]
gi|324013975|gb|EGB83194.1| protein SanA [Escherichia coli MS 60-1]
gi|324020612|gb|EGB89831.1| protein SanA [Escherichia coli MS 117-3]
gi|324118016|gb|EGC11915.1| hypothetical protein ERBG_02312 [Escherichia coli E1167]
gi|326339494|gb|EGD63305.1| SanA protein [Escherichia coli O157:H7 str. 1125]
gi|326343955|gb|EGD67716.1| SanA protein [Escherichia coli O157:H7 str. 1044]
gi|330911977|gb|EGH40487.1| SanA protein [Escherichia coli AA86]
gi|331039567|gb|EGI11787.1| protein SanA [Escherichia coli H736]
gi|331043519|gb|EGI15657.1| protein SanA [Escherichia coli M605]
gi|331048422|gb|EGI20498.1| protein SanA [Escherichia coli M718]
gi|331056471|gb|EGI28480.1| protein SanA [Escherichia coli TA206]
gi|331059445|gb|EGI31422.1| protein SanA [Escherichia coli TA143]
gi|331064037|gb|EGI35948.1| protein SanA [Escherichia coli TA271]
gi|331068945|gb|EGI40337.1| protein SanA [Escherichia coli TA280]
gi|331074552|gb|EGI45872.1| protein SanA [Escherichia coli H591]
gi|331078773|gb|EGI49975.1| protein SanA [Escherichia coli H299]
gi|332093241|gb|EGI98301.1| sanA [Shigella boydii 5216-82]
gi|332097513|gb|EGJ02493.1| sanA [Shigella boydii 3594-74]
gi|332101054|gb|EGJ04400.1| vancomycin sensitivity protein [Shigella sp. D9]
gi|332343922|gb|AEE57256.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332754776|gb|EGJ85141.1| sanA [Shigella flexneri 4343-70]
gi|332755182|gb|EGJ85546.1| sanA [Shigella flexneri K-671]
gi|332756426|gb|EGJ86777.1| sanA [Shigella flexneri 2747-71]
gi|333001279|gb|EGK20847.1| sanA [Shigella flexneri VA-6]
gi|333001911|gb|EGK21477.1| sanA [Shigella flexneri K-218]
gi|333002863|gb|EGK22419.1| sanA [Shigella flexneri K-272]
gi|333016609|gb|EGK35938.1| sanA [Shigella flexneri K-304]
gi|333016866|gb|EGK36190.1| sanA [Shigella flexneri K-227]
Length = 239
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV+ DI L+
Sbjct: 69 RIQGAINAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRKDLIAAGVDPSDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRI 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 181 REFAARFGALADLYIFKREPRFLGPLV 207
>gi|152970052|ref|YP_001335161.1| hypothetical protein KPN_01500 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150954901|gb|ABR76931.1| hypothetical protein KPN_01500 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 266
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 54/138 (39%), Gaps = 14/138 (10%)
Query: 64 KDGNIIVLLGNGTTIIPT----IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+++VL GN + A++ P S T LY++ +Q + T+
Sbjct: 35 PQVDVVVLAGNAVIPTIDAACRLAAVQAVPLLISGGVGHSTGYLYEAVRQDPRYRTL--- 91
Query: 120 GGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNI 176
G E+ V + + + + +E QS + +NA+F+ + +++ +
Sbjct: 92 ----PVDGRPEAHVLADIAHDYWYIPHSRLVVEDQSTNCGENARFTRTTLESRGLAHRRG 147
Query: 177 ILVSSAYHLKRSQLYFQH 194
I++ +R+ F
Sbjct: 148 IVIQDPTMQRRTMATFAR 165
>gi|194431510|ref|ZP_03063802.1| protein SanA [Shigella dysenteriae 1012]
gi|194420335|gb|EDX36412.1| protein SanA [Shigella dysenteriae 1012]
Length = 239
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV+ DI L+
Sbjct: 69 RIQGAINAYNSGKINY----LLLSGDNA-LQSYNEPMTMRKDLIAAGVDPSDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRI 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 181 REFAARFGALADLYIFKREPRFLGPLV 207
>gi|213618662|ref|ZP_03372488.1| hypothetical protein SentesTyp_20225 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 221
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 60/173 (34%), Gaps = 21/173 (12%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + RI + Y S K + +++SG +
Sbjct: 31 VVLGTAKYYRKGVINQYYR------YRIQGALNAYNSGKVNY----LLLSGDNA-LQSYN 79
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + L+ +GV+ DI L+ T + + + + I+++ +H +R+
Sbjct: 80 EPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD---INDFIIITQRFHCERAL 136
Query: 190 LYFQHFGINTK----ASCSDYLNAYYS-IIPLSANFYLTELALKE--YIGILI 235
H GI + S + L + + +E ++G L+
Sbjct: 137 FIALHMGIQAQCYAVPSPKNMLTVRLREFGARFSALADLYIFKREPRFLGPLV 189
>gi|119964395|ref|YP_948857.1| hypothetical protein AAur_3158 [Arthrobacter aurescens TC1]
gi|119951254|gb|ABM10165.1| putative uncharacterized DUF218 domain protein [Arthrobacter
aurescens TC1]
Length = 182
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 55/165 (33%), Gaps = 30/165 (18%)
Query: 31 LLFSFIGWGIIP-TILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L ++ + L+ Q + P +PQ + IV+LG
Sbjct: 7 LAWALTACVLAGVLWLIAAFQLFHNPPRATPQ---KTDAIVVLGG--------------- 48
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
S R+ + L + ++++ G P G E ++ + R D
Sbjct: 49 --MSNERLPVGLALRDQLGIKDL---VVVTTGLPANAGSDEFCEAHDGVTHLDCLRPD-- 101
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+T A + ++ +V+S YH++R+ +
Sbjct: 102 ----PLNTRGEALRLRDLAAERGWTSVTVVTSDYHVQRAGTLMKQ 142
>gi|300867952|ref|ZP_07112592.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300334089|emb|CBN57770.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 198
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 41/119 (34%), Gaps = 17/119 (14%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
+ R + + I +S G E+G++ + + L+
Sbjct: 54 AAEREVFAAKFAREH----PQLPIWVSSGSNP-------EYAEWVFAEAGIDPERLHLDY 102
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY------FQHFGINTKASCSD 205
+++DT N +K +++ L++S H++R+++ + S
Sbjct: 103 RAVDTVTNFTTLVDELKAQGIQSVYLITSDDHMRRARIIGEIVLGSRGISFKAIPVPSG 161
>gi|257095396|ref|YP_003169037.1| hypothetical protein CAP2UW1_3858 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047920|gb|ACV37108.1| protein of unknown function DUF218 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 233
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 51/127 (40%), Gaps = 30/127 (23%)
Query: 131 SIVYNNKLLESGVERDDIKLE-----TQSLDTFQNAQFSSSMIKN------MQGKNIILV 179
+ + + + GV D I + ++ +F+ A++ + ++ + + I+LV
Sbjct: 92 AFLARDLAVRLGVPEDRIHIIYGKDMARATSSFEEARYHLAYLQAGAPESGTEPRKILLV 151
Query: 180 SSAYHLKRSQLYFQHF----GINTKASCSDYLNAYYSIIPLSANFYLTELALKEY--IGI 233
+ +H R++ F+ GI+ A+ + P + T+ EY IG+
Sbjct: 152 TDWFHTSRARWIFRRVFAGSGIDVDAAAAR---------PEWVAKWWTD----EYAFIGV 198
Query: 234 LIAYYRG 240
Y +
Sbjct: 199 FNEYLKW 205
>gi|240949339|ref|ZP_04753682.1| SanA protein [Actinobacillus minor NM305]
gi|240296290|gb|EER46939.1| SanA protein [Actinobacillus minor NM305]
Length = 231
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/231 (16%), Positives = 79/231 (34%), Gaps = 35/231 (15%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+ W +S K + + +G I +K R D +
Sbjct: 13 IKKWGTCGRSFIKWSVGGFVFFILALLGIDFITGYSVK------DRIYTDINKLPDYHTA 66
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG +P + + R+ +L K + +++SG D Q
Sbjct: 67 VVLGTAKFYSKGVPNLYYQ------YRVEAASQLVKEHQIKH----LLVSG-DNQTPYYN 115
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E V LL+ GV ++ I+ + T + ++ + K I++S +H +R+
Sbjct: 116 EPKVMTEDLLKMGVPKNIIQQDFAGYRTLDSVIRANKVFK---LAPFIIISQQFHCERAL 172
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY---IGILIAY 237
+ I+ + Y + + ++E+ IG++ Y
Sbjct: 173 FIAKTQNIDAVCLVAKYPEGHVKVR------------IREFFARIGMIWDY 211
>gi|16761126|ref|NP_456743.1| hypothetical protein STY2414 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29141178|ref|NP_804520.1| hypothetical protein t0671 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213052359|ref|ZP_03345237.1| hypothetical protein Salmoneentericaenterica_05146 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213419691|ref|ZP_03352757.1| hypothetical protein Salmonentericaenterica_18613 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213428215|ref|ZP_03360965.1| hypothetical protein SentesTyphi_23210 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213646119|ref|ZP_03376172.1| hypothetical protein SentesTy_01466 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213854518|ref|ZP_03382758.1| hypothetical protein SentesT_10514 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289811814|ref|ZP_06542443.1| hypothetical protein Salmonellaentericaenterica_48927 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
gi|289824283|ref|ZP_06543878.1| hypothetical protein Salmonellentericaenterica_03714 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|25306415|pir||AF0780 vancomycin resistance protein [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16503424|emb|CAD02564.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29136804|gb|AAO68369.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 239
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 60/173 (34%), Gaps = 21/173 (12%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + RI + Y S K + +++SG +
Sbjct: 49 VVLGTAKYYRKGVINQYYR------YRIQGALNAYNSGKVNY----LLLSGDNA-LQSYN 97
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + L+ +GV+ DI L+ T + + + + I+++ +H +R+
Sbjct: 98 EPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD---INDFIIITQRFHCERAL 154
Query: 190 LYFQHFGINTK----ASCSDYLNAYYS-IIPLSANFYLTELALKE--YIGILI 235
H GI + S + L + + +E ++G L+
Sbjct: 155 FIALHMGIQAQCYAVPSPKNMLTVRLREFGARFSALADLYIFKREPRFLGPLV 207
>gi|324327397|gb|ADY22657.1| hypothetical protein YBT020_17135 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 225
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ ++I + G P+ P + Y+ + II++GG
Sbjct: 31 PQKCDVIFVFGGSH------PSNWQAP-----------LEAYR----KGLGNQIIVTGGT 69
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+E+ V NKL+E GV +D I E SL + N + + +
Sbjct: 70 SLHGMKHPSWNYGDLSEAEVIVNKLMEHGVPKDAIMFEKNSLHSIANVMEAKKIFDFTKI 129
Query: 174 KNIILV 179
++ V
Sbjct: 130 NRLLFV 135
>gi|301061545|ref|ZP_07202307.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300444353|gb|EFK08356.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 183
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 62/196 (31%), Gaps = 39/196 (19%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLY---------KSCKQHS 111
+ + + +V+L G P R+ E LY + + +
Sbjct: 4 EKPEPSDAVVVLYTGVEYYP---------------RLMEAASLYVKGSVGKAVINGNRKN 48
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK---LETQSLDTFQNAQFSSSMI 168
I + G + E L GV R+DI E + DT AQ +
Sbjct: 49 DALRWIETQGFKRCCPWYE--DKFRILGVLGVPREDIVHIGAED-AYDTVSEAQIVGDAL 105
Query: 169 KNMQGKNIILVSSAYHLKRSQ-----LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLT 223
+ IIL +S +H +R+ +Y + + +D + +
Sbjct: 106 IRKGYRTIILTTSKFHTRRAAFIWKNMYKDRLSVQIVPARTDPYDPAGWW----KHGRQI 161
Query: 224 ELALKEYIGILIAYYR 239
L EY + +++
Sbjct: 162 RWVLAEYGAWVYYWWK 177
>gi|307254226|ref|ZP_07536069.1| hypothetical protein appser9_4770 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306862816|gb|EFM94767.1| hypothetical protein appser9_4770 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
Length = 193
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 66/172 (38%), Gaps = 29/172 (16%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG P + + R+ ++L K T+++SG + +
Sbjct: 34 VVLGTSKFYAKGTPNLYYK------YRLEAAVQLINKGKVK----TLLVSGDNKTPY-YN 82
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E V N L + G+ ++ I+ + T + +S + K + I+VS +H +R+
Sbjct: 83 EPKVMLNDLYKMGIPKNIIEQDFAGYRTLDSIVRASKVYK---LEPFIIVSQQFHCERAL 139
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY---IGILIAYY 238
++ IN + Y + + L+E+ IG++ +
Sbjct: 140 FIAKYHNINAVCFAAKYPEGHIKVR------------LREFLARIGMIWDFL 179
>gi|303249806|ref|ZP_07336010.1| SanA protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307251995|ref|ZP_07533896.1| hypothetical protein appser6_5150 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302651373|gb|EFL81525.1| SanA protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306860687|gb|EFM92699.1| hypothetical protein appser6_5150 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 229
Score = 48.7 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/231 (16%), Positives = 84/231 (36%), Gaps = 32/231 (13%)
Query: 11 SYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV 70
S W +I +S ++ I +I +++ + + ++ V
Sbjct: 14 SLWKRCLSICPRIALVSFGIVFLLSITVFVIDYATGIYVKDNIYTDIEKLPKHRNA---V 70
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG P + + R+ ++L K T+++SG + + E
Sbjct: 71 VLGTSKFYAKGTPNLYYK------YRLEAAVQLINKGKAK----TLLVSGDNKTPY-YNE 119
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
V N L + G+ ++ I+ + T + +S + K + I+VS +H +R+
Sbjct: 120 PKVMLNDLYKMGIPKNIIEQDFAGYRTLDSIVRASKVYK---LEPFIIVSQQFHCERALF 176
Query: 191 YFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY---IGILIAYY 238
++ IN + Y + + L+E+ IG++ +
Sbjct: 177 IAKYHNINAVCFAAKYPEGHIKVR------------LREFLARIGMIWDFL 215
>gi|157369809|ref|YP_001477798.1| hypothetical protein Spro_1566 [Serratia proteamaculans 568]
gi|157321573|gb|ABV40670.1| protein of unknown function DUF218 [Serratia proteamaculans 568]
Length = 247
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 62/200 (31%), Gaps = 22/200 (11%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
R I + L + I K F Y P + V+LG
Sbjct: 2 WKRLIIGLFVIAALLMLSAIALDRWISWKTAPFVYDELQGLPHRQVG----VVLGTAKYY 57
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ RI + Y S K +++SG + Q E + L
Sbjct: 58 RTGVINQYYR------YRIQGAINAYNSGKVKY----LLLSGDNAQ-QSYNEPMTMRRDL 106
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ +GV DI L+ T + + + + I+++ +H +R+ H GI
Sbjct: 107 IAAGVAPSDIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQ 163
Query: 199 TK----ASCSDYLNAYYSII 214
+ S D + I
Sbjct: 164 AQCYAVPSPKDMMTVRVREI 183
>gi|58038750|ref|YP_190714.1| hypothetical protein GOX0275 [Gluconobacter oxydans 621H]
gi|58001164|gb|AAW60058.1| Hypothetical protein GOX0275 [Gluconobacter oxydans 621H]
Length = 239
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 32/88 (36%), Gaps = 7/88 (7%)
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKAS 202
+ I L ++ T NA ++ ++ +++V++ YH++R+ L +
Sbjct: 133 AERITLGRRATSTIGNAHETAQWARDNHLHRLLVVTAGYHIRRAVLEIHRVAPDLALVPY 192
Query: 203 CSDYLNAYYSIIPLSANFYLTELALKEY 230
L + + +EY
Sbjct: 193 PVVPLALQAPLSRRTLFL-----MFREY 215
>gi|312883604|ref|ZP_07743329.1| SanA protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368827|gb|EFP96354.1| SanA protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 242
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 66/202 (32%), Gaps = 22/202 (10%)
Query: 12 YWHLLCQSIRKIFFMSCFMLL---FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNI 68
+H ++F+ + F +G + I + + + ++
Sbjct: 4 LFHKDKPKKNWLYFIGKILAWMPMFVVLGCLTLFAIDRWVSYQARDHVYTNMSQIESFDV 63
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGL 128
V+LG + + RI ++LY+ K + ++SG +
Sbjct: 64 AVVLGTSKYLGKILNEYYTH-------RIEAAIQLYQKHKVEN----FLLSGDNA-HRSY 111
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
E LL++ + +D I L+ T + + + N +++S +H +R+
Sbjct: 112 NEPWTMKRDLLKANIPKDKIFLDYAGFRTLDSIVRAKEIFD---TDNFLIISQKFHCERA 168
Query: 189 QLYFQHFGIN----TKASCSDY 206
I+ S +
Sbjct: 169 IFIANSHNIDAKCFAVPGPSRH 190
>gi|161502667|ref|YP_001569779.1| hypothetical protein SARI_00714 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160864014|gb|ABX20637.1| hypothetical protein SARI_00714 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 239
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 60/173 (34%), Gaps = 21/173 (12%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + RI + Y S K + +++SG +
Sbjct: 49 VVLGTAKYYRKGVINQYYR------YRIQGALNAYNSGKVNY----LLLSGDNA-LQSYN 97
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + L+ +GV+ DI L+ T + + + + I+++ +H +R+
Sbjct: 98 EPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERAL 154
Query: 190 LYFQHFGINTK----ASCSDYLNAYYS-IIPLSANFYLTELALKE--YIGILI 235
H GI + S + L + + +E ++G L+
Sbjct: 155 FIALHMGIQAQCYAVPSPKNMLTVRLREFGARFSALADLYIFKREPRFLGPLV 207
>gi|16765514|ref|NP_461129.1| hypothetical protein STM2184 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56412902|ref|YP_149977.1| hypothetical protein SPA0667 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161613124|ref|YP_001587089.1| hypothetical protein SPAB_00832 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167551140|ref|ZP_02344895.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167991111|ref|ZP_02572210.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168229539|ref|ZP_02654597.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168236353|ref|ZP_02661411.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168242270|ref|ZP_02667202.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168259475|ref|ZP_02681448.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168466136|ref|ZP_02700006.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|168818106|ref|ZP_02830106.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194444390|ref|YP_002041455.1| hypothetical protein SNSL254_A2374 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194451491|ref|YP_002046237.1| hypothetical protein SeHA_C2419 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194471005|ref|ZP_03076989.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194737817|ref|YP_002115273.1| hypothetical protein SeSA_A2423 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197250828|ref|YP_002147155.1| hypothetical protein SeAg_B2330 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197262385|ref|ZP_03162459.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197361833|ref|YP_002141469.1| hypothetical protein SSPA0626 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198245373|ref|YP_002216268.1| hypothetical protein SeD_A2531 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200388117|ref|ZP_03214729.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204929219|ref|ZP_03220362.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205353319|ref|YP_002227120.1| hypothetical protein SG2220 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207857618|ref|YP_002244269.1| hypothetical protein SEN2177 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224583315|ref|YP_002637113.1| hypothetical protein SPC_1518 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238912626|ref|ZP_04656463.1| hypothetical protein SentesTe_16047 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|16420721|gb|AAL21088.1| vancomycin sensitivity protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56127159|gb|AAV76665.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161362488|gb|ABX66256.1| hypothetical protein SPAB_00832 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403053|gb|ACF63275.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194409795|gb|ACF70014.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194457369|gb|EDX46208.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194713319|gb|ACF92540.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195631432|gb|EDX49992.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197093309|emb|CAR58757.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197214531|gb|ACH51928.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197240640|gb|EDY23260.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197290569|gb|EDY29924.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197939889|gb|ACH77222.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199605215|gb|EDZ03760.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204321763|gb|EDZ06962.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205273100|emb|CAR38055.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205324029|gb|EDZ11868.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205330585|gb|EDZ17349.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205335954|gb|EDZ22718.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205338626|gb|EDZ25390.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205344953|gb|EDZ31717.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205350832|gb|EDZ37463.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206709421|emb|CAR33762.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224467842|gb|ACN45672.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261247398|emb|CBG25223.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267994249|gb|ACY89134.1| hypothetical protein STM14_2691 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301158745|emb|CBW18257.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312913174|dbj|BAJ37148.1| hypothetical protein STMDT12_C22050 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320086623|emb|CBY96394.1| Protein sanA [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321224838|gb|EFX49901.1| SanA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322615211|gb|EFY12133.1| hypothetical protein SEEM315_00395 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322617802|gb|EFY14698.1| hypothetical protein SEEM971_13850 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624604|gb|EFY21435.1| hypothetical protein SEEM973_15164 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626945|gb|EFY23741.1| hypothetical protein SEEM974_10815 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322634131|gb|EFY30867.1| hypothetical protein SEEM201_06316 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635678|gb|EFY32388.1| hypothetical protein SEEM202_16634 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322640187|gb|EFY36851.1| hypothetical protein SEEM954_05092 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646390|gb|EFY42902.1| hypothetical protein SEEM054_09695 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322656478|gb|EFY52767.1| hypothetical protein SEEM965_08487 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661454|gb|EFY57678.1| hypothetical protein SEEM19N_04684 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322665658|gb|EFY61842.1| hypothetical protein SEEM801_13855 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667182|gb|EFY63349.1| hypothetical protein SEEM507_08975 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671188|gb|EFY67316.1| hypothetical protein SEEM877_07642 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675172|gb|EFY71249.1| hypothetical protein SEEM867_05427 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680780|gb|EFY76815.1| hypothetical protein SEEM180_14727 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686955|gb|EFY82932.1| hypothetical protein SEEM600_00620 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323130511|gb|ADX17941.1| vancomycin resistance protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323192719|gb|EFZ77946.1| hypothetical protein SEEM581_11841 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198849|gb|EFZ83948.1| hypothetical protein SEEM501_02045 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323205141|gb|EFZ90119.1| hypothetical protein SEEM460_14111 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323208184|gb|EFZ93128.1| hypothetical protein SEEM020_21612 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323213532|gb|EFZ98323.1| hypothetical protein SEEM6152_03680 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215791|gb|EGA00534.1| hypothetical protein SEEM0077_09617 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221290|gb|EGA05713.1| hypothetical protein SEEM0047_01257 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323223844|gb|EGA08147.1| hypothetical protein SEEM0055_05621 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323231237|gb|EGA15352.1| hypothetical protein SEEM0052_15697 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233671|gb|EGA17763.1| hypothetical protein SEEM3312_00927 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237741|gb|EGA21801.1| hypothetical protein SEEM5258_18220 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323245724|gb|EGA29718.1| hypothetical protein SEEM1156_11185 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246538|gb|EGA30517.1| vancomycin high temperature exclusion protein [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323253017|gb|EGA36850.1| vancomycin high temperature exclusion protein [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323254775|gb|EGA38578.1| vancomycin high temperature exclusion protein [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323259525|gb|EGA43160.1| hypothetical protein SEEM8284_19170 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323268308|gb|EGA51783.1| vancomycin high temperature exclusion protein [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323271903|gb|EGA55319.1| vancomycin high temperature exclusion protein [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|326624019|gb|EGE30364.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
gi|326628408|gb|EGE34751.1| Vancomycin sensitivity protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332989118|gb|AEF08101.1| hypothetical protein STMUK_2214 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 239
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 60/173 (34%), Gaps = 21/173 (12%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + RI + Y S K + +++SG +
Sbjct: 49 VVLGTAKYYRKGVINQYYR------YRIQGALNAYNSGKVNY----LLLSGDNA-LQSYN 97
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + L+ +GV+ DI L+ T + + + + I+++ +H +R+
Sbjct: 98 EPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERAL 154
Query: 190 LYFQHFGINTK----ASCSDYLNAYYS-IIPLSANFYLTELALKE--YIGILI 235
H GI + S + L + + +E ++G L+
Sbjct: 155 FIALHMGIQAQCYAVPSPKNMLTVRLREFGARFSALADLYIFKREPRFLGPLV 207
>gi|258542112|ref|YP_003187545.1| hypothetical protein APA01_10160 [Acetobacter pasteurianus IFO
3283-01]
gi|256633190|dbj|BAH99165.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256636247|dbj|BAI02216.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256639302|dbj|BAI05264.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256642356|dbj|BAI08311.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645411|dbj|BAI11359.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648466|dbj|BAI14407.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651519|dbj|BAI17453.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654510|dbj|BAI20437.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 194
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 66/192 (34%), Gaps = 45/192 (23%)
Query: 22 KIFFMSCFMLLFSFIG-WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
++ F + F+F G +G L+ P + + IV L G
Sbjct: 5 RLSFRLILLACFAFAGGFGWFVNDALRP-----------PGYLPHADGIVALTGG----- 48
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
A RI+ S +R + ++ISG D Q +LL
Sbjct: 49 ---AGRIDTSLNLLAR--------------NQGEKLLISGVDTQTT--------LGELLP 83
Query: 141 SGVER---DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+ I L Q+ T NA ++ + + ++I+V+++YH++R+ L
Sbjct: 84 PTAPPALAERITLGYQARSTIGNATETAVWVADNHITSLIVVTASYHMRRALLELSRTLP 143
Query: 198 NTKASCSDYLNA 209
+ L
Sbjct: 144 DVTLYPYPVLPP 155
>gi|188533436|ref|YP_001907233.1| hypothetical protein ETA_12940 [Erwinia tasmaniensis Et1/99]
gi|188028478|emb|CAO96340.1| Vancomycin resistance protein [Erwinia tasmaniensis Et1/99]
Length = 236
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 26/165 (15%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + R+ + Y S K + +++SG + Q
Sbjct: 48 VVLGTAKFYRTGVINQYY------LYRMQGALNAYNSGKVNY----LLLSGDNAQ-QSYN 96
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + L+ +GVE DI L+ T + + + + I+++ +H +R+
Sbjct: 97 EPMTMRRDLIAAGVEPSDIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERAL 153
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
L H GI + P N + L+E L
Sbjct: 154 LIALHMGIQAQCYAV----------PSPKNMM--SVRLREVAARL 186
>gi|229157087|ref|ZP_04285168.1| hypothetical protein bcere0010_32710 [Bacillus cereus ATCC 4342]
gi|228626577|gb|EEK83323.1| hypothetical protein bcere0010_32710 [Bacillus cereus ATCC 4342]
Length = 225
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ + I + G P P + Y+ + II++GG
Sbjct: 31 PQKCDAIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNKIIVTGGT 69
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+++ V NKLLE GV +D I E SL + N + + +
Sbjct: 70 SLHGMKHPSWNYGDLSDAEVIVNKLLEHGVPKDAIMFEKNSLHSIANVIEAKKIFDFTKI 129
Query: 174 KNIILV 179
++ V
Sbjct: 130 NRLLFV 135
>gi|298493004|ref|YP_003723181.1| hypothetical protein Aazo_4922 ['Nostoc azollae' 0708]
gi|298234922|gb|ADI66058.1| protein of unknown function DUF218 ['Nostoc azollae' 0708]
Length = 198
Score = 48.3 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 52/183 (28%), Gaps = 33/183 (18%)
Query: 37 GWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSR 96
+ + L L R ++ I+ LG G
Sbjct: 12 WILSLASFSLVFLSIIPIRIAIASYQAPHPQAILTLGGG--------------------- 50
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
E + Q+ + I IS G A E + + I L+ +++D
Sbjct: 51 -QEREKFTAEFAQNHPNLHIWISSGILPAQAFA-------IFEEVSIPTERIHLDYRAVD 102
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ----HFGINTKASCSDYLNAYYS 212
T N K+I L++S +HL R++ GI S
Sbjct: 103 TVTNCTTLVHDFHKYHIKHIYLITSDFHLPRAKTIATLVLGSQGITFTPISIPSERPRES 162
Query: 213 IIP 215
I P
Sbjct: 163 IFP 165
>gi|119512125|ref|ZP_01631217.1| hypothetical protein N9414_08053 [Nodularia spumigena CCY9414]
gi|119463215|gb|EAW44160.1| hypothetical protein N9414_08053 [Nodularia spumigena CCY9414]
Length = 187
Score = 48.3 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 55/181 (30%), Gaps = 33/181 (18%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+ I+ +L L R ++ I+ LG S R
Sbjct: 2 FLILAGFILALLSIIPIRLAIASYQSPHPQAILTLGG------------------SPERE 43
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
T K H I +S G P K + + + L+ ++DT
Sbjct: 44 EFTAEFAKKH----PHLDIWVSSGIPPKQ-------AQAIFQNANISNHRLHLDYLAVDT 92
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ----HFGINTKASCSDYLNAYYSI 213
N K+ ++I L++SAYHL R++ GI SI
Sbjct: 93 VTNFTSLVDDFKHNHIQHIYLITSAYHLPRAKAIATLVLGSQGITFTPVPIPSQKPRESI 152
Query: 214 I 214
+
Sbjct: 153 V 153
>gi|238898866|ref|YP_002924548.1| vancomycin sensitivity, putative oxidoreductase [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229466626|gb|ACQ68400.1| vancomycin sensitivity, putative oxidoreductase [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 249
Score = 48.3 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 46/217 (21%), Positives = 76/217 (35%), Gaps = 32/217 (14%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPT--ILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ K F+S F +L S + I+ I LK Y++ P V L GT
Sbjct: 1 MWKTIFISLFFILLSLVMSSILIDRWIRLKTAHHIYEKIQFLPTRS------VGLVMGTA 54
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
I + R+ ++LYKS K +++SG + Q E
Sbjct: 55 KYYRTGVI----NQFYQYRLQGALQLYKSGKIKY----LLLSGDNAQPS-YNEPRTMKRD 105
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
+ SGV DI L+ T + + + N I+++ +H +R+ +FGI
Sbjct: 106 FIASGVFPQDIILDYAGFRTLDSIVRTHKV---FNTNNFIIITQRFHCERALFIALYFGI 162
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
P LT L+E + +
Sbjct: 163 QAACYAV----------PSPKKMLLTR--LREVLARI 187
>gi|228986591|ref|ZP_04146724.1| hypothetical protein bthur0001_32710 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228773162|gb|EEM21595.1| hypothetical protein bthur0001_32710 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 237
Score = 48.3 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ + I + G P P + Y+ + II++GG
Sbjct: 43 PQKCDAIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNKIIVTGGT 81
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+++ V NKLLE GV +D I E SL + N + + +
Sbjct: 82 SLHGMKHPSWNYGDLSDAEVIVNKLLEHGVPKDAIMFEKNSLHSIANVIEAKKIFDFTKI 141
Query: 174 KNIILV 179
++ V
Sbjct: 142 NRLLFV 147
>gi|74312667|ref|YP_311086.1| hypothetical protein SSON_2200 [Shigella sonnei Ss046]
gi|73856144|gb|AAZ88851.1| vancomycin sensitivity [Shigella sonnei Ss046]
gi|323168717|gb|EFZ54397.1| sanA [Shigella sonnei 53G]
Length = 239
Score = 48.3 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV+ DI L+
Sbjct: 69 RIQGAINAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRKDLIAAGVDPSDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRI 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 181 REFAARFGALADLYIFRREPRFLGPLV 207
>gi|85710207|ref|ZP_01041272.1| hypothetical protein NAP1_15018 [Erythrobacter sp. NAP1]
gi|85688917|gb|EAQ28921.1| hypothetical protein NAP1_15018 [Erythrobacter sp. NAP1]
Length = 178
Score = 48.3 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 36 IGWGIIPTILLKHLQF-SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY 94
I + + ++L+ L F + L P + + +++ G
Sbjct: 4 IRYLLAASVLVWALGFFWFAAALPQPAEELSTDAVIVPTGG------------------P 45
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDD----IKL 150
RI + +++ + + M +++G DP+ + + E V+ I L
Sbjct: 46 GRIAQGLQVLEQGQAQRM----LVTGVDPE-------VTRDEFAAEFEVDEARMDCCITL 94
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
++++DT NA ++ + ++ LV++ +H++R+
Sbjct: 95 GSEAVDTRSNATETAEWVAANDITSLRLVTTDWHMRRA 132
>gi|322514334|ref|ZP_08067386.1| SanA protein [Actinobacillus ureae ATCC 25976]
gi|322119769|gb|EFX91805.1| SanA protein [Actinobacillus ureae ATCC 25976]
Length = 235
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 62/172 (36%), Gaps = 29/172 (16%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG P + + R+ + L K K +++SG + +
Sbjct: 72 VVLGTSKYYAKGSPNLYYK------YRLEAAISLLKHGKVSH----LLVSGDNKTPY-YN 120
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E V N L G ++ IK + T + + + K + ++V+ +H +R+
Sbjct: 121 EPKVMQNDLRRMGARKEQIKQDFAGYRTLDSIVRAREVYK---LEPFVIVTQQFHCERAL 177
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY---IGILIAYY 238
++ IN + Y + + ++E+ +G+L +
Sbjct: 178 FIAKYHHINAVCFAAKYPEGHIKVR------------IREFFARLGMLWDFL 217
>gi|327394490|dbj|BAK11912.1| protein SanA [Pantoea ananatis AJ13355]
Length = 239
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 65/192 (33%), Gaps = 16/192 (8%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPT 81
K F++ ++ + + + + Y L+ + V+LG
Sbjct: 3 KRVFIALLFIILTMVATALGLDRWISWKTAPYIYDNLASLPHRQVG--VVLGTAKYYRTG 60
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ R+ + Y S K + +++SG + Q E + L++
Sbjct: 61 VINQYY------LYRMQGALNAYNSGKVNY----LLLSGDNAQ-QSYNEPMTMRRDLIKG 109
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
GV+ DI L+ T + + + + I+++ +H +R+ H GI +
Sbjct: 110 GVDPADIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHLGIQAQC 166
Query: 202 SCSDYLNAYYSI 213
S+
Sbjct: 167 YAVPSPKNMLSV 178
>gi|75907260|ref|YP_321556.1| hypothetical protein Ava_1037 [Anabaena variabilis ATCC 29413]
gi|75700985|gb|ABA20661.1| Protein of unknown function DUF218 [Anabaena variabilis ATCC 29413]
Length = 188
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ- 193
L+ GV + L+ ++ DT N + + ++I L++S YH++R+Q
Sbjct: 77 RRICLKFGVPEVKLHLDGRATDTVTNFTTLAGDFVEQRLQHIYLITSDYHMRRAQAIATI 136
Query: 194 ---HFGINTKASCS 204
GI
Sbjct: 137 VLGSQGIMVTPVAV 150
>gi|284929055|ref|YP_003421577.1| hypothetical protein UCYN_04900 [cyanobacterium UCYN-A]
gi|284809514|gb|ADB95219.1| uncharacterized conserved protein [cyanobacterium UCYN-A]
Length = 177
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 13/113 (11%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
E R + ++IS G PQK+ +GV + I L+ ++ DT
Sbjct: 50 ERQRFAAKLALKYTNSPLLISSGGPQKYLT-------KIFTNAGVNNNRIYLDYRAKDTV 102
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ----LYFQHFGI--NTKASCSD 205
N +K + K+I LV+S H+ R++ + F GI S+
Sbjct: 103 TNFVSLIKKLKIQKIKSIYLVTSNNHISRAKIIGEIIFGTQGIILKPFPVPSN 155
>gi|194365261|ref|YP_002027871.1| hypothetical protein Smal_1483 [Stenotrophomonas maltophilia
R551-3]
gi|194348065|gb|ACF51188.1| protein of unknown function DUF218 [Stenotrophomonas maltophilia
R551-3]
Length = 368
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 16/123 (13%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD--PQKH 126
I++LG G + S S R+ + Y + II+SGG P+
Sbjct: 205 IIVLGQG------PDELTTPLSAGSKLRLKAAAQRYAAGDAPF----IIVSGGAVHPRGT 254
Query: 127 GLAESIVYNNKLL-ESGVERDDIKLETQSL--DTFQNAQFSSSMIKNMQG-KNIILVSSA 182
E++ L+ G+ + I +E + T + ++VSS
Sbjct: 255 RSVEAVQMREALIARFGIPAEAILIEPYARHTTTNLRNAARLLAALQAPPRQPALVVSSP 314
Query: 183 YHL 185
H+
Sbjct: 315 SHI 317
>gi|307247447|ref|ZP_07529493.1| hypothetical protein appser2_4420 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306856063|gb|EFM88220.1| hypothetical protein appser2_4420 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 196
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 62/169 (36%), Gaps = 26/169 (15%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG P + + R+ ++L K +++SG + +
Sbjct: 37 VVLGTSKFYAKGTPNLYYK------YRLEAAVQLINKGKAK----KLLVSGDNKTPY-YN 85
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E V N L G+ ++ I+ + T + +S + K + I+VS +H +R+
Sbjct: 86 EPKVMLNDLYNMGIPKNMIEQDFAGYRTLDSIVRASKVYK---LEPFIIVSQQFHCERAL 142
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ IN + Y + + L+E++ + +
Sbjct: 143 FIAKYHNINAVCFAAKYPEGHIKVR------------LREFLARIGMIW 179
>gi|30063588|ref|NP_837759.1| hypothetical protein S2358 [Shigella flexneri 2a str. 2457T]
gi|30041841|gb|AAP17568.1| vancomycin resistance protein [Shigella flexneri 2a str. 2457T]
gi|313651250|gb|EFS15648.1| sanA [Shigella flexneri 2a str. 2457T]
Length = 239
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV+ DI L+
Sbjct: 69 RIQGAINAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRKDLIAAGVDPSDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRI 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 181 REFAARFGTLADLYIFKREPRFLGPLV 207
>gi|229031157|ref|ZP_04187167.1| hypothetical protein bcere0028_32120 [Bacillus cereus AH1271]
gi|228730196|gb|EEL81166.1| hypothetical protein bcere0028_32120 [Bacillus cereus AH1271]
Length = 225
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
Query: 106 SCKQHSMHCTIIISGG---------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLD 156
Q + II++GG L+E+ V +KL+E G+ +D I E SL
Sbjct: 53 KAYQQGLGKQIIVTGGTSLHGMKHPSWNYGDLSEAEVIVHKLIEHGIPKDAILFEKNSLH 112
Query: 157 TFQNAQFSSSMIKNMQGKNIILV 179
+ N + + + ++ V
Sbjct: 113 SIANVMEAKKIFDFTKINRLLFV 135
>gi|83773656|dbj|BAE63783.1| unnamed protein product [Aspergillus oryzae]
Length = 344
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 68/208 (32%), Gaps = 19/208 (9%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ--RPLLSPQWKKDGNIIVL--- 71
Q F S ++ + + IP L + +YQ ++ + ++IV+
Sbjct: 34 GQCWYTPFPWSLNLIFLPPLEFCEIPFFALTFVSLNYQLDTAIMHSKPSHCNHLIVVCCH 93
Query: 72 ---LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH-- 126
LG T + + ++ H +I SGG +K
Sbjct: 94 AIYLGGPTQGLSEDEWLLEPFQKGETPTFTAHVKAGLQALAHDPAALLIFSGGATKKDRT 153
Query: 127 GLAESIVYNNKLLESG-----VERDDIKLETQSLDTFQNAQFSS---SMIKNMQGKNIIL 178
L E Y E+ V I ET + D++QN FS + + + +
Sbjct: 154 SLTEGESYLALAQENNYFSYTVPPAQIIPETHATDSYQNVLFSLLRFKLYTGVYPSRVTV 213
Query: 179 VSSAYHLKRSQLY-FQHFGINTKASCSD 205
V+ + +R Y F G+ S
Sbjct: 214 VTHEFKRRRFMEYHFPAIGLVPIVRGSG 241
>gi|146312389|ref|YP_001177463.1| hypothetical protein Ent638_2747 [Enterobacter sp. 638]
gi|145319265|gb|ABP61412.1| protein of unknown function DUF218 [Enterobacter sp. 638]
Length = 239
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + Q E + L+ +GV+ DI L+
Sbjct: 69 RIQGALNAYNSGKVNY----LLLSGDNAQ-QSYNEPMTMRKDLIAAGVDPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRV 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
L +E ++G L+
Sbjct: 181 REFGARFGALADLYLFKREPRFLGPLV 207
>gi|229162343|ref|ZP_04290308.1| hypothetical protein bcere0009_31180 [Bacillus cereus R309803]
gi|228621143|gb|EEK78004.1| hypothetical protein bcere0009_31180 [Bacillus cereus R309803]
Length = 237
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ ++I + G P P ++ Y+ + II++GG
Sbjct: 43 PQKCDVIFVFGGSH------PGNWQAP-----------LKAYQQ----GLGNKIIVTGGT 81
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+E+ V NKL+E GV++D I ET SL + N + + +
Sbjct: 82 SLHGMKHPSWNYGNLSEAEVIVNKLIEHGVQKDAILFETNSLHSIANVMEAKKIFDFTKI 141
Query: 174 KNIILV 179
++ V
Sbjct: 142 NRLLFV 147
>gi|293569018|ref|ZP_06680331.1| hypothetical protein EfmE1071_1792 [Enterococcus faecium E1071]
gi|291588451|gb|EFF20286.1| hypothetical protein EfmE1071_1792 [Enterococcus faecium E1071]
Length = 253
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNII 177
G G++ES + L E + +E++S ++ +NA FS ++ ++ + I+
Sbjct: 82 GFHFGDGMSESEICRQYLKEVYDLPDKAFLIESKSTNSGENATFSLEILHSLGAVPEKIL 141
Query: 178 LVSSAYHLKRSQLYFQH 194
L++ +R++ F+
Sbjct: 142 LMNDPTLQRRTRATFEK 158
>gi|296536740|ref|ZP_06898797.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296262933|gb|EFH09501.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 200
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 12/124 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER---DDIKLET 152
R+ +RL + +IISG + L + + L
Sbjct: 60 RVDAGLRLLAEGHARA----LIISG---TGRDATLEELARRAGLPDPLPEGFAARVTLGR 112
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAY 210
++ T N Q + + Q ++ +V++A+H+ R+ L + G+
Sbjct: 113 EATSTRGNGQEVAEWAEARQIGSLRVVTAAFHMPRALLELRRTLPGVALVPHPVQAAGPR 172
Query: 211 YSII 214
++
Sbjct: 173 PGLL 176
>gi|296127236|ref|YP_003634488.1| hypothetical protein Bmur_2215 [Brachyspira murdochii DSM 12563]
gi|296019052|gb|ADG72289.1| protein of unknown function DUF218 [Brachyspira murdochii DSM
12563]
Length = 268
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 52/137 (37%), Gaps = 13/137 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ LYKS K I++SG D + E L++ GV + I L+
Sbjct: 110 RMDAAYELYKSGKVKY----ILVSG-DNRYRSYNEPRQMRLDLIKLGVNKKHIFLDFAGF 164
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-- 213
T + ++ + N +VS +H +R+ L + I+ A + + Y +
Sbjct: 165 RTRDSIIRANKVFD---LTNFTIVSQPFHNERAILIARQKKIDAIAYNAHNVRKLYRLRQ 221
Query: 214 IPL---SANFYLTELAL 227
P + ++ L
Sbjct: 222 FPREVGARALMFIDILL 238
>gi|229012701|ref|ZP_04169871.1| hypothetical protein bmyco0001_31410 [Bacillus mycoides DSM 2048]
gi|228748536|gb|EEL98391.1| hypothetical protein bmyco0001_31410 [Bacillus mycoides DSM 2048]
Length = 225
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Query: 109 QHSMHCTIIISGG---------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQ 159
Q + II++GG + L+ES V NKL+E GV D I E SL +
Sbjct: 56 QQGLGAQIIVTGGTSLHGMKHPNWNYGDLSESEVIVNKLIEHGVPEDAIIFEKNSLHSIA 115
Query: 160 NAQFSSSMIKNMQGKNIILV 179
N + + +++ V
Sbjct: 116 NVIEAKKIFDFTTINSLLFV 135
>gi|238919197|ref|YP_002932712.1| hypothetical protein NT01EI_1280 [Edwardsiella ictaluri 93-146]
gi|238868766|gb|ACR68477.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 244
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 21/182 (11%)
Query: 31 LLFSFIGWGIIPTILLKHLQF-----SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
L++ IG GI+ + L + Q + V+LG + P +
Sbjct: 6 LIYGLIGVGILSGLAALALDRWISWVTAPYIYEDVQDLPRREVGVVLGTAKYVAPGVINQ 65
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
RI + Y S K +++SG + E + L+ +GV
Sbjct: 66 YYR------YRIQGALNAYNSNKVSY----LLLSGDNA-LQSYNEPVTMRRDLIAAGVPN 114
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK--ASC 203
DI L+ T + + + + +++ +H +R+ H GI + A
Sbjct: 115 GDIVLDYAGFRTLDSVVRTRRVFD---TDDFTIITQRFHCERALFIAMHLGIQAQCLAVP 171
Query: 204 SD 205
S
Sbjct: 172 SP 173
>gi|307689226|ref|ZP_07631672.1| hypothetical protein Ccel74_13799 [Clostridium cellulovorans 743B]
Length = 207
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNIILVSSAYHLKRSQLYFQ 193
+ L+ +GV + I E +S T +NA FS + + ++ K IL ++H +R + +Q
Sbjct: 90 DVLITNGVAENSILWEDKSSWTKENATFSRKVADDSKLEIKKAILCCKSFHARRVLMCYQ 149
Query: 194 ------HFGINTKAS 202
F I
Sbjct: 150 LAFPEVKFYIQPIPY 164
>gi|302875791|ref|YP_003844424.1| hypothetical protein Clocel_2968 [Clostridium cellulovorans 743B]
gi|302578648|gb|ADL52660.1| protein of unknown function DUF218 [Clostridium cellulovorans 743B]
Length = 202
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN--MQGKNIILVSSAYHLKRSQLYFQ 193
+ L+ +GV + I E +S T +NA FS + + ++ K IL ++H +R + +Q
Sbjct: 85 DVLITNGVAENSILWEDKSSWTKENATFSRKVADDSKLEIKKAILCCKSFHARRVLMCYQ 144
Query: 194 ------HFGINTKAS 202
F I
Sbjct: 145 LAFPEVKFYIQPIPY 159
>gi|320199739|gb|EFW74328.1| SanA protein [Escherichia coli EC4100B]
Length = 239
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV+ DI L+
Sbjct: 69 RIQGAINAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRKDLIAAGVDPTDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRI 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 181 REFAARFGALADLYIFKREPRFLGPLV 207
>gi|307130739|ref|YP_003882755.1| hypothetical protein Dda3937_03495 [Dickeya dadantii 3937]
gi|306528268|gb|ADM98198.1| predicted protein [Dickeya dadantii 3937]
Length = 251
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 20/189 (10%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
R IF + +L+ + + + I + + Y+ P + V+LG
Sbjct: 2 WKRLIFGLFTAILVMACGAFLLDRCISWRTAPYIYEDVQDLPPRQVG----VVLGTAKYY 57
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ RI + Y S K +++SG + Q E + L
Sbjct: 58 RAGVINQYY------LFRIQGALNAYNSGKVSY----LLLSGDNAQ-QSYNEPMTMRRDL 106
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ +GV +I L+ T + + + + +++ +H +R+ H GI
Sbjct: 107 IAAGVPPTNIVLDYAGFRTLDSIVRTRKVFD---TNDFTIITQRFHCERALFIALHKGIQ 163
Query: 199 TK--ASCSD 205
+ A S
Sbjct: 164 AQCFAVPSP 172
>gi|258544135|ref|ZP_05704369.1| conserved membrane protein SanA [Cardiobacterium hominis ATCC
15826]
gi|258520643|gb|EEV89502.1| conserved membrane protein SanA [Cardiobacterium hominis ATCC
15826]
Length = 211
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
+RI LY+ K I+SG D + E L+ +G+ D I+ +
Sbjct: 64 ARIDAAAALYRGGKAQF----FIVSG-DNRSLSYNEPAQMRADLIAAGIPADHIQPDYAG 118
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
L T + + + + ++ I+VS A+H R+ +H G A
Sbjct: 119 LRTLDSVLRADKVFR---LQDYIIVSQAFHNARAVFLARHHGQAVVA 162
>gi|257898344|ref|ZP_05677997.1| conserved hypothetical protein [Enterococcus faecium Com15]
gi|257836256|gb|EEV61330.1| conserved hypothetical protein [Enterococcus faecium Com15]
Length = 253
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 60/157 (38%), Gaps = 18/157 (11%)
Query: 46 LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS----FQSYSRIFETM 101
L P K I++L GNG I+ A +
Sbjct: 12 WNQLLAFLAAPDEKDFEKLSAPILILAGNGLPILADKAAQMYVNGQVERLFLVGGVGHAT 71
Query: 102 R-LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQ 159
R LY++ ++ H + G++ES + L E + +E++S ++ +
Sbjct: 72 RILYENFEKQGFHF----------EEGMSESEICRQYLKEVYDLPDKAFLIESKSTNSGE 121
Query: 160 NAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
NA FS ++ ++ + ++L++ +R++ F+
Sbjct: 122 NATFSLEILHSLDAVPEKVLLMNDPTLQRRTRATFEK 158
>gi|218554709|ref|YP_002387622.1| hypothetical protein ECIAI1_2221 [Escherichia coli IAI1]
gi|300819165|ref|ZP_07099367.1| protein SanA [Escherichia coli MS 107-1]
gi|218361477|emb|CAQ99066.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|300528318|gb|EFK49380.1| protein SanA [Escherichia coli MS 107-1]
gi|323184233|gb|EFZ69610.1| sanA [Escherichia coli 1357]
Length = 239
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV+ DI L+
Sbjct: 69 RIQGAINAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRKDLIAAGVDPTDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRI 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 181 REFAARFGALADLYIFKREPRFLGPLV 207
>gi|47564627|ref|ZP_00235672.1| hypothetical protein protein [Bacillus cereus G9241]
gi|47558779|gb|EAL17102.1| hypothetical protein protein [Bacillus cereus G9241]
Length = 225
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ + I + G P P + Y+ + II++GG
Sbjct: 31 PQKCDAIFVFGGSH------PGNWQAP-----------LAAYRQ----GLGNKIIVTGGT 69
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+++ V NKL+E GV +D I E SL + N + + +
Sbjct: 70 SLHGMKHPSWNYGDLSDAEVIVNKLMEHGVPKDAIMFEKNSLHSIANVIEAKKIFDFTKI 129
Query: 174 KNIILV 179
++ V
Sbjct: 130 NRLLFV 135
>gi|332093902|gb|EGI98955.1| hypothetical protein SD15574_1753 [Shigella dysenteriae 155-74]
Length = 152
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 27/107 (25%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I ++ + + ++ISGG + G AE+ + +
Sbjct: 51 IDAACKIARDQQI-----PLLISGGIGHSTTFLYSAIAQHPHYNTVRTTGRAEATILADI 105
Query: 138 LLES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSS 181
+ + + I +E QS + +NA+FS +++ + I+V
Sbjct: 106 AHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQD 152
>gi|329114135|ref|ZP_08242897.1| Hypothetical protein APO_0915 [Acetobacter pomorum DM001]
gi|326696211|gb|EGE47890.1| Hypothetical protein APO_0915 [Acetobacter pomorum DM001]
Length = 216
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 56/156 (35%), Gaps = 33/156 (21%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
L P + + IV L G A RI+ S +R + +
Sbjct: 52 LRPPGYLPHADGIVALTGG--------AGRIDTSLNLLAR--------------NQGERL 89
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVER---DDIKLETQSLDTFQNAQFSSSMIKNMQG 173
+ISG D Q A LL S + I L Q+ T NA ++ + +
Sbjct: 90 LISGVDTQTTLAA--------LLPSTAPPALAERITLGYQARSTIGNATETAVWVADNHI 141
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
++I+V+++YH++R+ L + L
Sbjct: 142 TSLIVVTASYHMRRALLELSRTLPDVTLYPYPVLPP 177
>gi|170781252|ref|YP_001709584.1| putative secreted protein [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155820|emb|CAQ00945.1| putative secreted protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 203
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 47/141 (33%), Gaps = 14/141 (9%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHC 114
R P ++V+LG G P +R L +S +
Sbjct: 39 RAPGRPDGTVGREVVVVLGLGNA----------SPRANRINRYRVRAAL-RSIDPRAAST 87
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+++ GG E+ + + + LE S T +N + +I++
Sbjct: 88 ALVLCGGSVMG-DEPEARILARFARDELGYAGPVVLEEASTSTRENVANAIPLIEDA--D 144
Query: 175 NIILVSSAYHLKRSQLYFQHF 195
I +VS H + ++ Y +
Sbjct: 145 TIRIVSDPVHAEEARGYLRAA 165
>gi|283785953|ref|YP_003365818.1| hypothetical protein ROD_22721 [Citrobacter rodentium ICC168]
gi|282949407|emb|CBG89020.1| putative exported protein [Citrobacter rodentium ICC168]
Length = 239
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 21/173 (12%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + RI + Y S K + +++SG +
Sbjct: 49 VVLGTAKYYRAGVINQYYR------YRIQGALNAYNSGKVNY----LLLSGDNAM-QSYN 97
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + L+ +GV+ DI L+ T + + + + I+++ +H +R+
Sbjct: 98 EPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERAL 154
Query: 190 LYFQHFGINTK----ASCSDYLNAYYS-IIPLSANFYLTELALKE--YIGILI 235
H GI + S D L+ L +E ++G L+
Sbjct: 155 FIALHMGIQAQCYAVPSPKDMLSVRIREFGARFGALADLYLFKREPRFLGPLV 207
>gi|187732733|ref|YP_001879527.1| hypothetical protein SbBS512_E0827 [Shigella boydii CDC 3083-94]
gi|187429725|gb|ACD08999.1| protein SanA [Shigella boydii CDC 3083-94]
Length = 239
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 54/147 (36%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV DI L+
Sbjct: 69 RIQGAINAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRKDLIAAGVAPSDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRI 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 181 REFAARFGALADLYIFKREPRFLGPLV 207
>gi|269138516|ref|YP_003295216.1| hypothetical protein ETAE_1160 [Edwardsiella tarda EIB202]
gi|267984176|gb|ACY84005.1| hypothetical protein ETAE_1160 [Edwardsiella tarda EIB202]
gi|304558537|gb|ADM41201.1| SanA [Edwardsiella tarda FL6-60]
Length = 244
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 21/182 (11%)
Query: 31 LLFSFIGWGIIPTILLKHLQF-----SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
L++ IG GI+ + L + Q + V+LG + P +
Sbjct: 6 LIYGLIGVGILSGLAALALDRWISWVTAPYIYEDVQDLPRREVGVVLGTAKYVAPGVINQ 65
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
RI + Y S K +++SG + E + L+ +GV
Sbjct: 66 YYR------YRIQGALNAYNSNKVSY----LLLSGDNA-LQSYNEPVTMRRDLIAAGVPN 114
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK--ASC 203
DI L+ T + + + + +++ +H +R+ H GI + A
Sbjct: 115 GDIVLDYAGFRTLDSIVRARRVFD---TDDFTIITQRFHCERALFIAMHLGIQAQCLAVP 171
Query: 204 SD 205
S
Sbjct: 172 SP 173
>gi|157144916|ref|YP_001452235.1| hypothetical protein CKO_00645 [Citrobacter koseri ATCC BAA-895]
gi|157082121|gb|ABV11799.1| hypothetical protein CKO_00645 [Citrobacter koseri ATCC BAA-895]
Length = 239
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ GV+ DI L+
Sbjct: 69 RIQGALNAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRKDLIAGGVDPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLTVRV 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 181 REFGARFGALADLYIFKREPRFLGPLV 207
>gi|238761078|ref|ZP_04622055.1| hypothetical protein ykris0001_34230 [Yersinia kristensenii ATCC
33638]
gi|238761331|ref|ZP_04622307.1| hypothetical protein ykris0001_20640 [Yersinia kristensenii ATCC
33638]
gi|238700305|gb|EEP93046.1| hypothetical protein ykris0001_20640 [Yersinia kristensenii ATCC
33638]
gi|238700558|gb|EEP93298.1| hypothetical protein ykris0001_34230 [Yersinia kristensenii ATCC
33638]
Length = 275
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + H E + L+ +GV DI L+
Sbjct: 69 RIQGALNAYNSGKVSY----LLLSGDNA-LHSYNEPMTMRRDLIAAGVAPSDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D LN
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIAMHMGIQAQCFAVPSPKDMLNVRV 180
Query: 212 SII 214
I
Sbjct: 181 REI 183
>gi|119484903|ref|ZP_01619385.1| hypothetical protein L8106_15560 [Lyngbya sp. PCC 8106]
gi|119457721|gb|EAW38845.1| hypothetical protein L8106_15560 [Lyngbya sp. PCC 8106]
Length = 227
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 47/153 (30%), Gaps = 33/153 (21%)
Query: 57 LLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
++ I+ LG G+ +R T + + I
Sbjct: 34 AIAHSQAPQPQAILTLGGGS------------------NRELFTAQFAQDH----PDLDI 71
Query: 117 IISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+S G P+ + +GV + L+ ++DT N K ++I
Sbjct: 72 WVSSGIPR-------EPAMDIFRAAGVPDRRVHLDYLAVDTVTNFTSMVDEFKQRNIQHI 124
Query: 177 ILVSSAYHLKRSQLYFQ----HFGINTKASCSD 205
L++S +HL RSQ GI
Sbjct: 125 YLITSDFHLPRSQAIATIVLGSQGITFTPVAVP 157
>gi|332710420|ref|ZP_08430367.1| hypothetical protein LYNGBM3L_50940 [Lyngbya majuscula 3L]
gi|332350751|gb|EGJ30344.1| hypothetical protein LYNGBM3L_50940 [Lyngbya majuscula 3L]
Length = 239
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 11/101 (10%)
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
S R L K I+IS G P +++ ++ + + LE
Sbjct: 31 SIRREIHVAELAKQYPDK----RILISHGSP---DPCIWLIFKREMAS----SEQVWLEK 79
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ TF N FS + + + + L++S H+ R+Q Q
Sbjct: 80 CANSTFGNFFFSIPIFQRWGVRKVKLITSGTHVPRAQWMAQ 120
>gi|271500869|ref|YP_003333894.1| hypothetical protein Dd586_2338 [Dickeya dadantii Ech586]
gi|270344424|gb|ACZ77189.1| protein of unknown function DUF218 [Dickeya dadantii Ech586]
Length = 252
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 20/189 (10%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
R IF + +L+ + + + I + + Y+ P + V+LG
Sbjct: 2 WKRLIFGLFATILVLACSAFLLDRCISWRTAPYIYEDVEDLPPRQVG----VVLGTAKYY 57
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ RI + + S K +++SG + Q E + L
Sbjct: 58 RAGVINQYY------LFRIQGALNAFNSGKVSY----LLLSGDNAQ-QSYNEPMTMRRDL 106
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ +GV I L+ T + + + + +++ +H +R+ H GI
Sbjct: 107 IAAGVPPASIVLDYAGFRTLDSIVRTRKVFD---TNDFTIITQRFHCERALFIALHKGIQ 163
Query: 199 TK--ASCSD 205
+ A S
Sbjct: 164 AQCFAVPSP 172
>gi|300024263|ref|YP_003756874.1| hypothetical protein Hden_2757 [Hyphomicrobium denitrificans ATCC
51888]
gi|299526084|gb|ADJ24553.1| protein of unknown function DUF218 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 214
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 58/157 (36%), Gaps = 37/157 (23%)
Query: 116 IIISGGDPQKHGLAESIVY----NNKLLESGVERDDIKLETQ------------------ 153
++++GGD + A + + +LL SGV R + E Q
Sbjct: 45 VVLTGGDLRVE--AGAKLMNEGRAKRLLISGVNRKVRREEMQRLLGLDAKTFNCCVDLGY 102
Query: 154 -SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAY 210
+LDT NA + + +N +I+V+S YH+ RS + +
Sbjct: 103 EALDTVGNADETRTWARNNGYTKLIIVTSRYHMPRSLAELALVMPKVTLIPYPVTPRH-- 160
Query: 211 YSIIPLSANFYLTE---LALKEYIGIL--IAYYRGNR 242
P +A + + + + EY+ L +A R
Sbjct: 161 ---FPETAWWLHSSTTRVLVSEYLKFLPAVARLAAQR 194
>gi|167647181|ref|YP_001684844.1| hypothetical protein Caul_3219 [Caulobacter sp. K31]
gi|167349611|gb|ABZ72346.1| protein of unknown function DUF218 [Caulobacter sp. K31]
Length = 207
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH----FGINTKASCSDYLNAYY 211
DT NA ++ + +++I+V++ YH+ RS L ++ ++ LNA+
Sbjct: 103 DTIGNASETAEWARAKDYRSLIVVTADYHMPRSMLELHASMPGVTLHPYPVVTESLNAHR 162
Query: 212 SI 213
Sbjct: 163 WW 164
>gi|324114440|gb|EGC08409.1| hypothetical protein ERIG_00979 [Escherichia fergusonii B253]
Length = 239
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 20/139 (14%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV+ DI L+
Sbjct: 69 RIQGAINAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRKDLIAAGVDPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T + + + + I+++ +H +R+ H GI + P
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAV----------P 170
Query: 216 LSANFYLTELALKEYIGIL 234
+ + + ++E+
Sbjct: 171 SPKDMW--SVRIREFAARF 187
>gi|311278872|ref|YP_003941103.1| hypothetical protein Entcl_1558 [Enterobacter cloacae SCF1]
gi|308748067|gb|ADO47819.1| protein of unknown function DUF218 [Enterobacter cloacae SCF1]
Length = 244
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV+ DI L+
Sbjct: 69 RIQGALNAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRKDLIAAGVDPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRI 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
L +E ++G L+
Sbjct: 181 REFGARFGALADLYLFKREPRFLGPLV 207
>gi|307263104|ref|ZP_07544726.1| hypothetical protein appser13_5270 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|306871730|gb|EFN03452.1| hypothetical protein appser13_5270 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 196
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 64/172 (37%), Gaps = 29/172 (16%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG P + + R+ ++L K +++SG + +
Sbjct: 37 VVLGTSKFYAKGTPNLYYK------YRLEAAVQLINKGKAK----KLLVSGDNKTPY-YN 85
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E V N L G+ ++ I+ + T + +S + K + I+VS +H +R+
Sbjct: 86 EPKVMLNDLYNMGIPKNMIEQDFAGYRTLDSIVRASKVYK---LEPFIIVSQQFHCERAL 142
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY---IGILIAYY 238
++ IN + Y + + L+E+ IG++ +
Sbjct: 143 FIAKYHNINAVCFTAKYPEGHIKVR------------LREFLARIGMIWDFL 182
>gi|294637408|ref|ZP_06715699.1| protein YdcF [Edwardsiella tarda ATCC 23685]
gi|291089401|gb|EFE21962.1| protein YdcF [Edwardsiella tarda ATCC 23685]
Length = 262
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGINT 199
G++ I LE S + +NA+FS ++++ I+LV +R+ FQ
Sbjct: 111 GIDGCRIWLEKASTNCGENARFSRALLQAQGEMPSRILLVQDPLMQRRTLATFQRV-WQD 169
Query: 200 KASCSDYLNAYYSIIPL 216
+ + S ++ + +P
Sbjct: 170 QPAVS--FASWPTFVPQ 184
>gi|218549557|ref|YP_002383348.1| hypothetical protein EFER_2229 [Escherichia fergusonii ATCC 35469]
gi|218357098|emb|CAQ89731.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
gi|325497957|gb|EGC95816.1| hypothetical protein ECD227_2054 [Escherichia fergusonii ECD227]
Length = 239
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 20/139 (14%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV+ DI L+
Sbjct: 69 RIQGAINAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRKDLIAAGVDPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T + + + + I+++ +H +R+ H GI + P
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAV----------P 170
Query: 216 LSANFYLTELALKEYIGIL 234
+ + + ++E+
Sbjct: 171 SPKDMW--SVRIREFAARF 187
>gi|17233190|ref|NP_490280.1| hypothetical protein all7174 [Nostoc sp. PCC 7120]
gi|17135712|dbj|BAB78258.1| all7174 [Nostoc sp. PCC 7120]
Length = 180
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 18/110 (16%)
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLA------------------ESIVYNNKLLESG 142
+RL + Q I+ GG K E +G
Sbjct: 37 VRLAIANHQAPQPQAILTLGGGADKEEFTALFAQFYPDIKIWVSSGIEPQQARAIFHAAG 96
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ L+ ++ DT N + K+I L++S +H+ R++
Sbjct: 97 ITDSQFHLDYRATDTVTNFTSLVEDFQQQHIKHIFLITSKFHMPRAKAIA 146
>gi|323136484|ref|ZP_08071566.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
gi|322398558|gb|EFY01078.1| protein of unknown function DUF218 [Methylocystis sp. ATCC 49242]
Length = 225
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 153 QSLDTFQNAQFSSSMIKNMQGKN-IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYY 211
Q++DT NA+ + ++ +I+V+S YH+ R+ + + K ++ +
Sbjct: 116 QAMDTAGNARETREWAQSRNITRSLIVVTSNYHMPRALVELSAALPDIKLYPFPVVSEHV 175
Query: 212 SIIPLSANFYLTELALKEYIGILIAYYRGN 241
+ + + + L EY+ L A R
Sbjct: 176 DVADWATDLGVARLVGSEYVKFLGALLRTR 205
>gi|120402709|ref|YP_952538.1| hypothetical protein Mvan_1708 [Mycobacterium vanbaalenii PYR-1]
gi|119955527|gb|ABM12532.1| protein of unknown function DUF218 [Mycobacterium vanbaalenii
PYR-1]
Length = 190
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 42/146 (28%), Gaps = 33/146 (22%)
Query: 52 SYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
++ + IV+LG R + L +
Sbjct: 30 TFLFAHSKVDPLARADAIVVLGGEHD-----------------GRETYGLTLAEQ----G 68
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS---LDTFQNAQFSSSMI 168
+++S ++ V R DI++ ++ T A + +
Sbjct: 69 YAPVVLLS-----NPYRSKDKVMAKA----CAPRTDIRVICRAPVPSTTRGEAMMTRELA 119
Query: 169 KNMQGKNIILVSSAYHLKRSQLYFQH 194
+I+VS YHL R++ F
Sbjct: 120 DKHGWTTVIVVSWRYHLPRARRIFDQ 145
>gi|261821224|ref|YP_003259330.1| hypothetical protein Pecwa_1943 [Pectobacterium wasabiae WPP163]
gi|261605237|gb|ACX87723.1| protein of unknown function DUF218 [Pectobacterium wasabiae WPP163]
Length = 259
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 20/139 (14%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ T+ Y S K +++SG + E + L+ +GV DI L+
Sbjct: 69 RMQGTINAYNSGKVSY----LLLSGDNA-LQSYNEPMTMRRDLIAAGVPPSDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T + + + + +++ +H +R+ H GI + P
Sbjct: 124 RTLDSIVRTRKVFD---TNDFTIITQRFHCERALFIALHLGIQAQCYAV----------P 170
Query: 216 LSANFYLTELALKEYIGIL 234
N + ++E+ L
Sbjct: 171 SPKNMMIVR--IREFGARL 187
>gi|302867445|ref|YP_003836082.1| hypothetical protein Micau_2975 [Micromonospora aurantiaca ATCC
27029]
gi|315506145|ref|YP_004085032.1| hypothetical protein ML5_5412 [Micromonospora sp. L5]
gi|302570304|gb|ADL46506.1| protein of unknown function DUF218 [Micromonospora aurantiaca ATCC
27029]
gi|315412764|gb|ADU10881.1| protein of unknown function DUF218 [Micromonospora sp. L5]
Length = 212
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 63/164 (38%), Gaps = 21/164 (12%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM---RLYKSCKQHSMHCTIIISGGDPQKH 126
VLL G ++ R+ + +S +R + R + + + ++ +GG P
Sbjct: 7 VLLVFGRGVVAGDDGYRL--TAESVARTEAAVAYVRAHAEAFRRAPDARVVFTGGWPHGP 64
Query: 127 GLA--------ESIVYNNKLLESGVER-DDIKLETQSLDTFQNAQFSSS--MIKNMQG-- 173
A E+ + E+G++ ET+S T QN + ++ +
Sbjct: 65 AGAPGPPAGYREAELMRALAREAGLDAYASSAAETRSRTTVQNLAHTVQDGLLDAAEFTA 124
Query: 174 -KNIILVSSAYHLKRSQLYFQH-FGINTKASCSDYLNAYYSIIP 215
+ + LVS +HL R +L G++ + +D +P
Sbjct: 125 QRPLGLVSHPWHLPRVRLLAARVLGLSG-PALADVPVTAPDPVP 167
>gi|227551624|ref|ZP_03981673.1| YdcF like protein [Enterococcus faecium TX1330]
gi|257895774|ref|ZP_05675427.1| conserved hypothetical protein [Enterococcus faecium Com12]
gi|227179187|gb|EEI60159.1| YdcF like protein [Enterococcus faecium TX1330]
gi|257832339|gb|EEV58760.1| conserved hypothetical protein [Enterococcus faecium Com12]
Length = 253
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNII 177
G + G++ES + L E + +E++S ++ +NA FS ++ ++ + ++
Sbjct: 82 GFHFEEGMSESEICRQYLKEVYDLPDKAFLIESKSTNSGENATFSLEILHSLDAVPEKVL 141
Query: 178 LVSSAYHLKRSQLYFQH 194
L++ +R++ F+
Sbjct: 142 LMNDPTLQRRTRATFEK 158
>gi|293571807|ref|ZP_06682823.1| hypothetical protein EfmE980_1571 [Enterococcus faecium E980]
gi|291608061|gb|EFF37367.1| hypothetical protein EfmE980_1571 [Enterococcus faecium E980]
Length = 253
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 97 IFETMRLYKSCKQHSM-------HCTIIISG-----GDPQKHGLAESIVYNNKLLE-SGV 143
+ ++Y + + + H T I+ G G + G++ES + L E +
Sbjct: 46 ADKAAQMYVNGQVERLFLVGGVGHATRILYGNFEKQGFHFEEGMSESEICRQYLKEVYDL 105
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+E++S ++ +NA FS ++ ++ + ++L++ +R++ F+
Sbjct: 106 PDKAFLIESKSTNSGENATFSLEILHSLDAVPEKVLLMNDPTLQRRTRATFEK 158
>gi|293556208|ref|ZP_06674798.1| hypothetical protein EfmE1039_1540 [Enterococcus faecium E1039]
gi|294615652|ref|ZP_06695507.1| hypothetical protein EfmE1636_1768 [Enterococcus faecium E1636]
gi|291591481|gb|EFF23135.1| hypothetical protein EfmE1636_1768 [Enterococcus faecium E1636]
gi|291601627|gb|EFF31889.1| hypothetical protein EfmE1039_1540 [Enterococcus faecium E1039]
Length = 253
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNII 177
G + G++ES + L E + +E++S ++ +NA FS ++ ++ + ++
Sbjct: 82 GFHFEEGMSESEICRQYLKEVYDLPDKAFLIESKSTNSGENATFSLEILHSLDAVPEKVL 141
Query: 178 LVSSAYHLKRSQLYFQH 194
L++ +R++ F+
Sbjct: 142 LMNDPTLQRRTRATFEK 158
>gi|69248545|ref|ZP_00604766.1| Protein of unknown function DUF218 [Enterococcus faecium DO]
gi|257878423|ref|ZP_05658076.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|257882841|ref|ZP_05662494.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
gi|257889378|ref|ZP_05669031.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
gi|257894391|ref|ZP_05674044.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
gi|258616058|ref|ZP_05713828.1| protein YdcF [Enterococcus faecium DO]
gi|260560012|ref|ZP_05832190.1| conserved hypothetical protein [Enterococcus faecium C68]
gi|261207888|ref|ZP_05922573.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|289566956|ref|ZP_06447360.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
gi|293559958|ref|ZP_06676466.1| hypothetical protein EfmE1162_0621 [Enterococcus faecium E1162]
gi|294620346|ref|ZP_06699658.1| hypothetical protein EfmE1679_3034 [Enterococcus faecium E1679]
gi|314937786|ref|ZP_07845103.1| conserved hypothetical protein [Enterococcus faecium TX0133a04]
gi|314941668|ref|ZP_07848548.1| conserved hypothetical protein [Enterococcus faecium TX0133C]
gi|314948915|ref|ZP_07852284.1| conserved hypothetical protein [Enterococcus faecium TX0082]
gi|314950966|ref|ZP_07854033.1| conserved hypothetical protein [Enterococcus faecium TX0133A]
gi|314992968|ref|ZP_07858364.1| conserved hypothetical protein [Enterococcus faecium TX0133B]
gi|314996415|ref|ZP_07861458.1| conserved hypothetical protein [Enterococcus faecium TX0133a01]
gi|68194391|gb|EAN08898.1| Protein of unknown function DUF218 [Enterococcus faecium DO]
gi|257812651|gb|EEV41409.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|257818499|gb|EEV45827.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
gi|257825738|gb|EEV52364.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
gi|257830770|gb|EEV57377.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
gi|260073847|gb|EEW62171.1| conserved hypothetical protein [Enterococcus faecium C68]
gi|260078271|gb|EEW65977.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|289161255|gb|EFD09151.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
gi|291593417|gb|EFF24979.1| hypothetical protein EfmE1679_3034 [Enterococcus faecium E1679]
gi|291606046|gb|EFF35472.1| hypothetical protein EfmE1162_0621 [Enterococcus faecium E1162]
gi|313589397|gb|EFR68242.1| conserved hypothetical protein [Enterococcus faecium TX0133a01]
gi|313592491|gb|EFR71336.1| conserved hypothetical protein [Enterococcus faecium TX0133B]
gi|313596821|gb|EFR75666.1| conserved hypothetical protein [Enterococcus faecium TX0133A]
gi|313599559|gb|EFR78402.1| conserved hypothetical protein [Enterococcus faecium TX0133C]
gi|313642817|gb|EFS07397.1| conserved hypothetical protein [Enterococcus faecium TX0133a04]
gi|313644705|gb|EFS09285.1| conserved hypothetical protein [Enterococcus faecium TX0082]
Length = 253
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNII 177
G + G++ES + L E + +E++S ++ +NA FS ++ ++ + I+
Sbjct: 82 GFHFEDGMSESEICRQYLKEVYDLPDKAFLIESKSTNSGENATFSLEILHSLGAVPEKIL 141
Query: 178 LVSSAYHLKRSQLYFQH 194
L++ +R++ F+
Sbjct: 142 LMNDPTLQRRTRATFEK 158
>gi|238753400|ref|ZP_04614763.1| hypothetical protein yruck0001_19260 [Yersinia ruckeri ATCC 29473]
gi|238708353|gb|EEQ00708.1| hypothetical protein yruck0001_19260 [Yersinia ruckeri ATCC 29473]
Length = 244
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 18/182 (9%)
Query: 28 CFMLLFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAI 85
+ LF+ G ++ I L + Q + V+LG +
Sbjct: 5 LIISLFTIAGLLMVSAIALDRWISWKTAPYIYDEIQQLPHRQVGVVLGTAKYYRTGVI-- 62
Query: 86 RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
+ RI + Y S K + +++SG + E + L+ +GV
Sbjct: 63 ----NQFYLYRIQGAINAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRRDLIAAGVAP 113
Query: 146 DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK--ASC 203
DI L+ T + + + + I+++ +H +R+ H GI + A
Sbjct: 114 ADIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCFAVP 170
Query: 204 SD 205
S
Sbjct: 171 SP 172
>gi|261340583|ref|ZP_05968441.1| protein SanA [Enterobacter cancerogenus ATCC 35316]
gi|288316993|gb|EFC55931.1| protein SanA [Enterobacter cancerogenus ATCC 35316]
Length = 237
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + Q E + L+ GV+ DI L+
Sbjct: 69 RIQGALNAYNSGKVNY----LLLSGDNAQ-QSYNEPVTMRKDLIAGGVDPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRV 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 181 REFGARFGALADLYIFKREPRFLGPLV 207
>gi|257884455|ref|ZP_05664108.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
gi|257820293|gb|EEV47441.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
Length = 253
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNII 177
G + G++ES + L E + +E++S ++ +NA FS ++ ++ + ++
Sbjct: 82 GFHFEEGMSESEICRQYLKEVYDLPDKAFLIESKSTNSGENATFSLEILHSLDAVPEKVL 141
Query: 178 LVSSAYHLKRSQLYFQH 194
L++ +R++ F+
Sbjct: 142 LMNDPTLQRRTRATFEK 158
>gi|229092468|ref|ZP_04223625.1| hypothetical protein bcere0021_32360 [Bacillus cereus Rock3-42]
gi|228690873|gb|EEL44647.1| hypothetical protein bcere0021_32360 [Bacillus cereus Rock3-42]
Length = 225
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ ++I + G P P + Y+ + II++GG
Sbjct: 31 PQKCDVIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNQIIVTGGT 69
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+++ V NKL+E GV D I E SL + N + + +
Sbjct: 70 SLHGMKHPSWNYEDLSDAEVIVNKLMEHGVPTDAIMFEKNSLHSIANVMEAKKIFDFTKI 129
Query: 174 KNIILV 179
++ V
Sbjct: 130 NRLLFV 135
>gi|170767500|ref|ZP_02901953.1| protein SanA [Escherichia albertii TW07627]
gi|170123834|gb|EDS92765.1| protein SanA [Escherichia albertii TW07627]
Length = 239
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 20/139 (14%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV+ DI L+
Sbjct: 69 RIQGAINAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRKDLIAAGVDPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
T + + + + I+++ +H +R+ H GI + P
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAV----------P 170
Query: 216 LSANFYLTELALKEYIGIL 234
+ + + ++E+
Sbjct: 171 SPKDMW--SVRIREFAARF 187
>gi|62180771|ref|YP_217188.1| hypothetical protein SC2201 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62128404|gb|AAX66107.1| vancomycin sensitivity [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322715246|gb|EFZ06817.1| Protein sanA [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 260
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 60/173 (34%), Gaps = 21/173 (12%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + RI + Y S K + +++SG +
Sbjct: 70 VVLGTAKYYRKGVINQYYR------YRIQGALNAYNSGKVNY----LLLSGDNA-LQSYN 118
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + L+ +GV+ DI L+ T + + + + I+++ +H +R+
Sbjct: 119 EPMTMRKDLIAAGVDPADIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERAL 175
Query: 190 LYFQHFGINTK----ASCSDYLNAYYS-IIPLSANFYLTELALKE--YIGILI 235
H GI + S + L + + +E ++G L+
Sbjct: 176 FIALHMGIQAQCYAVPSPKNMLTVRLREFGARFSTLADLYIFKREPRFLGPLV 228
>gi|257887238|ref|ZP_05666891.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
gi|257823292|gb|EEV50224.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
Length = 253
Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNII 177
G + G++ES + L E + +E++S ++ +NA FS ++ ++ + ++
Sbjct: 82 GFHFEEGMSESEICRQYLKEVYDLPDKAFLIESKSTNSGENATFSLEILHSLDAVPEKVL 141
Query: 178 LVSSAYHLKRSQLYFQH 194
L++ +R++ F+
Sbjct: 142 LMNDPTLQRRTRATFEK 158
>gi|196035606|ref|ZP_03103010.1| conserved domain protein [Bacillus cereus W]
gi|228934782|ref|ZP_04097613.1| hypothetical protein bthur0009_32360 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|195991907|gb|EDX55871.1| conserved domain protein [Bacillus cereus W]
gi|228824682|gb|EEM70483.1| hypothetical protein bthur0009_32360 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 225
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 30/126 (23%)
Query: 63 KKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG- 121
+ ++I + G P P + Y+ + II++GG
Sbjct: 31 PQKCDVIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNQIIVTGGT 69
Query: 122 --------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
L+++ V NKL+E GV D I E SL + N + + +
Sbjct: 70 SLHGMKHPSWNYGDLSDAEVIVNKLMEHGVPTDAILFEKNSLHSIANVMEAKKIFDFTKI 129
Query: 174 KNIILV 179
++ V
Sbjct: 130 NRLLFV 135
>gi|326386450|ref|ZP_08208073.1| hypothetical protein Y88_2345 [Novosphingobium nitrogenifigens DSM
19370]
gi|326209111|gb|EGD59905.1| hypothetical protein Y88_2345 [Novosphingobium nitrogenifigens DSM
19370]
Length = 194
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 27/157 (17%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSF 91
LF I ++ LL L F+ P P + ++ L G+
Sbjct: 9 LFRRILSLMVLAWLLGFLWFALFLP--RPADHTRTDAVIALTGGS--------------- 51
Query: 92 QSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLE 151
RI + + ++ + M ++SG + + + + + + L
Sbjct: 52 ---GRIQRGIEVLRADEAKRM----LVSG---VDSEVKPAEFEAEYGVPASLFACCMTLG 101
Query: 152 TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
+S DT NA ++ I +++ LV++ +H++R+
Sbjct: 102 YESFDTRSNALEAARWIARYDLRSVRLVTTDWHMRRA 138
>gi|296103792|ref|YP_003613938.1| hypothetical protein ECL_03455 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295058251|gb|ADF62989.1| hypothetical protein ECL_03455 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 239
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV+ DI L+
Sbjct: 69 RIQGALNAYNSGKVNY----LLLSGDNA-LQSYNEPVTMRKDLIAAGVDPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRV 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 181 REFGARFGALADLYIFKREPRFLGPLV 207
>gi|294635520|ref|ZP_06714000.1| protein SanA [Edwardsiella tarda ATCC 23685]
gi|291091089|gb|EFE23650.1| protein SanA [Edwardsiella tarda ATCC 23685]
Length = 265
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 16/138 (11%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + P + RI + Y S K +++SG +
Sbjct: 50 VVLGTAKYVAPGVINQYYR------YRIQGALNAYNSGKVSY----LLLSGDNA-LQSYN 98
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + L+ +GV DI L+ T + + + + +++ +H +R+
Sbjct: 99 EPVTMRRDLIAAGVPSSDIVLDYAGFRTLDSIVRTRRVFD---TNDFTIITQRFHCERAL 155
Query: 190 LYFQHFGINTK--ASCSD 205
H GI + A S
Sbjct: 156 FIAMHLGIQAQCLAVPSP 173
>gi|85375113|ref|YP_459175.1| hypothetical protein ELI_11430 [Erythrobacter litoralis HTCC2594]
gi|84788196|gb|ABC64378.1| hypothetical protein ELI_11430 [Erythrobacter litoralis HTCC2594]
Length = 176
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 62/179 (34%), Gaps = 48/179 (26%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
I ++F + F+ + L P+++ + + +++
Sbjct: 2 IWRLFLLVVVAYALGFMWFAAA---------------LPQPRFEGETDAVIV-------- 38
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + + K M +++G DP+
Sbjct: 39 ----------PTGAAGRIDRGLEVLDGGKARMM----LVTGVDPEVRP-------AEFAA 77
Query: 140 ESGVERDDIK----LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
E V + ++ L ++DT NA ++ + + +++ LV++ +H++R+ +
Sbjct: 78 EFEVSMERMRCCVSLGFDAVDTRGNAAETADWVAENRIRSLRLVTTDWHMRRASGELRQ 136
>gi|255531612|ref|YP_003091984.1| hypothetical protein Phep_1711 [Pedobacter heparinus DSM 2366]
gi|255344596|gb|ACU03922.1| protein of unknown function DUF218 [Pedobacter heparinus DSM 2366]
Length = 232
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 48/136 (35%), Gaps = 20/136 (14%)
Query: 116 IIISGGDPQKHG-----LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN 170
++I+GG +G AES + + I E +S + +N + +
Sbjct: 71 VVITGGVANYNGSFYKKEAESAQIKSYIPIEKYPDKQIYTENKSKNIIENIVEAQKVYSF 130
Query: 171 MQGKNIILVSSAYHLKRSQLYFQHF------GINTKASCSDYLNAYYSIIPLSANFYLTE 224
+++ ++ +Y R+ L + F +DYL P+S +
Sbjct: 131 KNIRSMTFLAHSYATTRAALSLKRFFPSVMLHCIPLPLPTDYLK-----YPISRQMWWRT 185
Query: 225 LALKEYIGILIA-YYR 239
+ G++ Y R
Sbjct: 186 AYGR---GLVWGEYLR 198
>gi|293396978|ref|ZP_06641252.1| membrane protein SanA [Serratia odorifera DSM 4582]
gi|291420449|gb|EFE93704.1| membrane protein SanA [Serratia odorifera DSM 4582]
Length = 248
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 62/199 (31%), Gaps = 20/199 (10%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ K +S F++ + I + Y L + V+LG
Sbjct: 1 MWKRLIISLFVITAVLMLSAIALDRWISWKTAPYIYDELQQLPNRQVG--VVLGTAKYYR 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K +++SG + E + L+
Sbjct: 59 TGVINQYYR------YRIQGAINAYNSGKVKY----LLLSGDNA-LQSYNEPMTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+G+ DI L+ T + + + + +++ +H +R+ H GI
Sbjct: 108 AAGIAPSDIVLDYAGFRTLDSIVRTRKVFDAN---DFTIITQRFHCERALFIALHMGIQA 164
Query: 200 K----ASCSDYLNAYYSII 214
+ S D L I
Sbjct: 165 QCFAVPSPKDMLTVRVREI 183
>gi|258591830|emb|CBE68131.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
Length = 232
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 33/217 (15%), Positives = 70/217 (32%), Gaps = 31/217 (14%)
Query: 31 LLFSFIGWGIIPTILLK---HLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
L+ I + ++ +L L + R L++ + I +L +
Sbjct: 5 LIRWLIVFPLLGLLLYVGHPFLLRAMGRYLITEDRLQKAEAIAVLAGDGGV--------- 55
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTI--IISGGDPQ---KHGLAESIVYN-NKLLES 141
R E +RLY+ + T + +G + + E L
Sbjct: 56 -------GRTLEAVRLYQDGYAPRIILTRQRLPTGYEALTRLGITVPEERHIQWMVLKAM 108
Query: 142 GVERDDIK-LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS-QLYFQ--HFGI 197
V + + +S T ++K + + IILV++ H R+ ++ + +
Sbjct: 109 RVPVTAVLQVNERSDSTASEMVHLVRLLKEHRIRTIILVTNKSHSTRASKILARVSRNNL 168
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+ + + Y S L EY+ +L
Sbjct: 169 TSISRPTRYDTFDPDGWWRSRA--DARDVLFEYLKLL 203
>gi|254409533|ref|ZP_05023314.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196183530|gb|EDX78513.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 206
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 15/115 (13%)
Query: 106 SCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS 165
Q I +S G P V + + + L+ +++DT N
Sbjct: 48 QFAQTHPSLDIWVSSGSPP-------DVLYAIFQNANIPIQRVHLDYRAVDTVTNFTSLV 100
Query: 166 SMIKNMQGKNIILVSSAYHLKRSQLYF------QHFGINTKASCSDYLNAYYSII 214
+ K ++I L++S YH+ R++ Q A S+ S +
Sbjct: 101 ADFKRRNIQHIYLITSDYHIPRAKAIAILVLGSQSITFTPVAVPSN--QPPESWL 153
>gi|242238738|ref|YP_002986919.1| hypothetical protein Dd703_1295 [Dickeya dadantii Ech703]
gi|242130795|gb|ACS85097.1| protein of unknown function DUF218 [Dickeya dadantii Ech703]
Length = 254
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 22/105 (20%)
Query: 110 HSMHCTIIISGGDPQKH-------------------GLAESIVYNNKL-LESGVERDDIK 149
S++ +++SGG G+ E+ + + G+ I
Sbjct: 53 QSINIPVLLSGGIGHSTALLQTAMAKNPLTTTIDTAGMCEAEMLSAIAGRVFGMADAQIL 112
Query: 150 LETQSLDTFQNAQFSSSMIKN--MQGKNIILVSSAYHLKRSQLYF 192
+E +S + +NA FSS ++++ +NIILV +R+ F
Sbjct: 113 MEPRSRNCGENADFSSELLRDGQRTWRNIILVQDPLMQRRTVETF 157
>gi|111022413|ref|YP_705385.1| hypothetical protein RHA1_ro05447 [Rhodococcus jostii RHA1]
gi|110821943|gb|ABG97227.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 187
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 65/203 (32%), Gaps = 35/203 (17%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
LL + + T LL + Y P + + IV+LG
Sbjct: 9 LLAAALAVMTTATALLWGGRIIYSNAPEDP--LRPVDAIVVLGG---------------- 50
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN-KLLESGVERDDIK 149
++ R+ + L + +I + D + E + + + V
Sbjct: 51 -ENDGRVPYAVSLAEQGLARQ---VVISNPHDARDPSTNEGCATTDPRFTVTCVAP---- 102
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH-----FGINTKASCS 204
T AQF+ ++ ++++VS YHL R++ FQ ++
Sbjct: 103 ---HPATTRGEAQFTRTLAVQNGWTSVLVVSWRYHLPRARYIFQRCFDGDLTMHAVPRSY 159
Query: 205 DYLNAYYSIIPLSANFYLTELAL 227
D+ A + + + AL
Sbjct: 160 DFSLAKWGYVYAYQTAGFVKAAL 182
>gi|159902694|ref|YP_001550038.1| hypothetical protein P9211_01531 [Prochlorococcus marinus str. MIT
9211]
gi|159887870|gb|ABX08084.1| Hypothetical protein P9211_01531 [Prochlorococcus marinus str. MIT
9211]
Length = 194
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 60/155 (38%), Gaps = 32/155 (20%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+G+I I L L + Q + + +I++LG R
Sbjct: 9 FGLISGIFLIILFGTIQPLIRVSSNTRKPQLILVLGG------------------DLDRE 50
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL-ESGVERDDIKLETQSLD 156
F +++ K I+I+GG + Y+ ++ E G++ ++ + ++ D
Sbjct: 51 FLGLKIANRLK-----LPILITGGSNPE--------YSQWMVKEEGIDSALVRRDYRAKD 97
Query: 157 TFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
T N + +I+L++S YH+ R+ L
Sbjct: 98 TLSNFTSIVDDLAEDGINHILLITSEYHIDRAMLI 132
>gi|293377611|ref|ZP_06623800.1| conserved hypothetical protein [Enterococcus faecium PC4.1]
gi|292643611|gb|EFF61732.1| conserved hypothetical protein [Enterococcus faecium PC4.1]
Length = 253
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIK--NMQGKNII 177
G + G++ES + L E + +E++S ++ +NA FS ++ + + ++
Sbjct: 82 GFHFEEGMSESEICRQYLKEVYDLPDKAFLIESKSTNSGENATFSLEILHFLDAVPEKVL 141
Query: 178 LVSSAYHLKRSQLYFQH 194
L++ +R++ F+
Sbjct: 142 LMNDPTLQRRTRATFEK 158
>gi|153876561|ref|ZP_02003819.1| sanA protein [Beggiatoa sp. PS]
gi|152066975|gb|EDN66181.1| sanA protein [Beggiatoa sp. PS]
Length = 169
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 9/137 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI T++LYK+ K I+ SG + K+ E L+ GV R+ I L+
Sbjct: 23 RIDATVQLYKAGKIKH----ILASGTNHTKY-YNEPNEMRKALMAQGVPREAITLDYAGF 77
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI-I 214
T + + +I+++S ++H KR+ +GI + + +
Sbjct: 78 RTLDSVIRCKKIFSQT---DIVVISQSFHNKRALFISDFYGITAIGFNARDVPLRDDLKT 134
Query: 215 PLSANFYLTELALKEYI 231
P F ++ L YI
Sbjct: 135 PFREIFARSKAVLDLYI 151
>gi|124027519|ref|YP_001012839.1| phosphate import ATP-binding protein [Hyperthermus butylicus DSM
5456]
gi|123978213|gb|ABM80494.1| phosphate import ATP-binding protein [Hyperthermus butylicus DSM
5456]
Length = 255
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 58/163 (35%), Gaps = 26/163 (15%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+L+F P L + +Q P P N+ V R+
Sbjct: 68 VLVFGVDALKADPYELRSRIGMVFQTPNPFPHMSIYENVAV----------AAKINRVAK 117
Query: 90 SFQSYSRI----FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
+ + +I E RL+ K +SGG Q+ LA ++ KLL
Sbjct: 118 TREELDQIVKWALEAARLWDEVKDRLHDPPTALSGGQQQRLCLARALAMRPKLLLLDEPT 177
Query: 146 DDIKLETQSLDT--FQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+I + +T +NA S+++ + IILV+ H+
Sbjct: 178 ANI----DAHNTVMIENAL--RSLVEELGL-TIILVT---HMP 210
>gi|301165835|emb|CBW25408.1| putative membrane protein [Bacteriovorax marinus SJ]
Length = 212
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 68/179 (37%), Gaps = 31/179 (17%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ ++ I F+S ++ I I I +Y + + + ++IV+ +
Sbjct: 17 RYLQNIVFISLVSIILYAIMSLIFVLIA-----RNYNQETEKTFYNRSPDLIVVFTGDS- 70
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
RI ++L K KQ ++ T + S +
Sbjct: 71 -----------------GRIPLAVQLAKKYKQSNIFITGVYSKNSVDS-------LLRPL 106
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHLKRSQLYFQHF 195
++ ++ + + ++ + +T +N + ++ +G K II++S YH+ R +L F
Sbjct: 107 KIDEEIDTNLLTIDYLARNTVENVISTLRHLRERKGNKKIIVISHDYHVMRIKLIFNKL 165
>gi|307592076|ref|YP_003899667.1| hypothetical protein Cyan7822_5740 [Cyanothece sp. PCC 7822]
gi|306985721|gb|ADN17601.1| protein of unknown function DUF218 [Cyanothece sp. PCC 7822]
Length = 205
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 4/84 (4%)
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY--- 191
+GV + ++ +++DT N + K +++ LV+S YH+ R+
Sbjct: 82 KELFQMAGVPPRLLHIDARAIDTVTNFTSLVADFKKKHIQHLYLVTSDYHMPRAIAIGII 141
Query: 192 -FQHFGINTKASCSDYLNAYYSII 214
GI S +
Sbjct: 142 VLGSQGIVFTPLSVHSEQPSESWL 165
>gi|257482213|ref|ZP_05636254.1| hypothetical protein PsyrptA_03027 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 115
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 2/101 (1%)
Query: 3 LSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQ 61
+ ++ LI+ +W + F + + + + + ++ P
Sbjct: 16 VLFVLLILGWWLRRSRPRLATAFFAVGLGGLWLMSLPVAVEFAARKIEQVPPLPQQQWAT 75
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMR 102
+ + IV+LGNG P+ R+ R
Sbjct: 76 LAQQADAIVVLGNGRERNSPTWGT-DTPTGLGLERLRLAAR 115
>gi|315187347|gb|EFU21103.1| hypothetical protein SpithDRAFT_0100 [Spirochaeta thermophila DSM
6578]
Length = 195
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF-------GINTKAS-CSD 205
S T+++A+ + S + I++V+ YH R+ L F+ G+ + +D
Sbjct: 102 SASTYEDARITKSFLSERGLSKILIVTDWYHAWRTLLVFERVLGKEVEIGLELSSVPPTD 161
Query: 206 YLNAYYSII 214
+Y ++
Sbjct: 162 DTVRWYGVL 170
>gi|121709278|ref|XP_001272369.1| DUF218 domain protein [Aspergillus clavatus NRRL 1]
gi|119400518|gb|EAW10943.1| DUF218 domain protein [Aspergillus clavatus NRRL 1]
Length = 266
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 42/104 (40%), Gaps = 11/104 (10%)
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDI-------KLETQSLDTFQNAQFSSSMIKNMQGK 174
DP HGL E+ V + E + I +E +S + NA + +++ +
Sbjct: 84 DPAIHGLPEAQVLHRIFTE-CFDGARIVDSGCTVLVEDRSTNCGANAAETKRLLETRGIR 142
Query: 175 N--IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
I++V L+R+ + ++ A S ++ + +P
Sbjct: 143 PREIVVVQDPTMLRRTVASLEQVYADS-AGPSPRFVSWPTFVPR 185
>gi|238788869|ref|ZP_04632660.1| hypothetical protein yfred0001_11890 [Yersinia frederiksenii ATCC
33641]
gi|238723174|gb|EEQ14823.1| hypothetical protein yfred0001_11890 [Yersinia frederiksenii ATCC
33641]
Length = 245
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 12/123 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + E + L+ +GV DI L+
Sbjct: 69 RIQGAINAYNSGKVSY----LLLSGDNA-LQSYNEPMTMRRDLIAAGVAPSDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D LN
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCFAVPSPKDMLNVRV 180
Query: 212 SII 214
I
Sbjct: 181 REI 183
>gi|50121633|ref|YP_050800.1| hypothetical protein ECA2709 [Pectobacterium atrosepticum SCRI1043]
gi|49612159|emb|CAG75609.1| putative vancomycin resistance protein [Pectobacterium atrosepticum
SCRI1043]
Length = 260
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 48/138 (34%), Gaps = 16/138 (11%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + R+ T+ Y S K +++SG +
Sbjct: 49 VVLGTAKYYRTGVINQYY------LFRMQGTINAYNSGKVSY----LLLSGDNA-LQSYN 97
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + L+ +GV DI L+ T + + + + +++ +H +R+
Sbjct: 98 EPMTMRRDLIAAGVPPSDIVLDYAGFRTLDSIVRTRKVFD---TNDFTIITQRFHCERAL 154
Query: 190 LYFQHFGINTK--ASCSD 205
H GI + A S
Sbjct: 155 FIALHLGIQAQCYAVPSP 172
>gi|121997578|ref|YP_001002365.1| hypothetical protein Hhal_0787 [Halorhodospira halophila SL1]
gi|121588983|gb|ABM61563.1| protein of unknown function DUF218 [Halorhodospira halophila SL1]
Length = 56
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 189 QLYFQHFGINTKASCSDYLNAYYS------IIPLSANFYLTELALKEYIGILIAYY 238
+F+ G+ + + + + +P + +TE AL EY+G++ A +
Sbjct: 1 MRHFEAAGLEPIPAPTRHKTGVEARDESSYWVPSAKALRMTERALYEYMGLVAARF 56
>gi|313238603|emb|CBY19990.1| unnamed protein product [Oikopleura dioica]
Length = 141
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 134 YNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN----IILVSSAYHLKRS 188
+ +E + I LE ++ +T QN Q+ +I + N + +V+S YH R+
Sbjct: 1 MSQIAVEEFNADSTKIVLENKARNTVQNFQYGFEIIAQLCKSNFAVVVTIVTSDYHAART 60
Query: 189 QLYFQ 193
Sbjct: 61 FYVAH 65
>gi|89074929|ref|ZP_01161379.1| Putative SanA protein [Photobacterium sp. SKA34]
gi|89049326|gb|EAR54889.1| Putative SanA protein [Photobacterium sp. SKA34]
Length = 248
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 8/104 (7%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + LYK K ++SG + E LL++GV D I L+
Sbjct: 69 RITAALDLYKQGKIDY----FLLSGDNA-HRSYNEPWTMKRDLLKAGVPDDKIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
T + + + + N +++ +H +R+ + I
Sbjct: 124 RTLDSIVRAKEVFEA---DNFTIITQQFHCERALFIADTYKIKA 164
>gi|213401427|ref|XP_002171486.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
gi|211999533|gb|EEB05193.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
Length = 312
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 64/183 (34%), Gaps = 15/183 (8%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD-GNIIV 70
+ + R I + + F F+G + + L + PLL+ + K ++I+
Sbjct: 23 FRRFVHSKSRFILLVGAVFVCFLFLGALYL-NMTKNELVCFHSAPLLAAEPLKHLSHLII 81
Query: 71 L------LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+ LG T I + +R Q + ++ SGG +
Sbjct: 82 IAGHAVWLGGATNGESDTEWILESYQKGEGKVFAQHVRAGIELMQADENSLLVFSGGQTR 141
Query: 125 KHGLAESIVYNNKLLESGVE----RDDIKLETQSLDTFQNAQFSSS---MIKNMQGKNII 177
H S + L ++ + E + D+++N FS + I + + I
Sbjct: 142 LHAGPLSESQSYYRLSMQIDSTHSPERRTTEEFARDSYENVVFSIARFHEITSRYPEKIT 201
Query: 178 LVS 180
+VS
Sbjct: 202 IVS 204
>gi|317155099|ref|XP_001824916.2| hypothetical protein AOR_1_1094084 [Aspergillus oryzae RIB40]
Length = 268
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 39/111 (35%), Gaps = 11/111 (9%)
Query: 106 SCKQHSMHCTIIISGGDPQKH--GLAESIVYNNKLLESG-----VERDDIKLETQSLDTF 158
H +I SGG +K L E Y E+ V I ET + D++
Sbjct: 55 QALAHDPAALLIFSGGATKKDRTSLTEGESYLALAQENNYFSYTVPPAQIIPETHATDSY 114
Query: 159 QNAQFSS---SMIKNMQGKNIILVSSAYHLKRSQLY-FQHFGINTKASCSD 205
QN FS + + + +V+ + +R Y F G+ S
Sbjct: 115 QNVLFSLLRFKLYTGVYPSRVTVVTHEFKRRRFMEYHFPAIGLVPIVRGSG 165
>gi|333030317|ref|ZP_08458378.1| protein of unknown function DUF218 [Bacteroides coprosuis DSM
18011]
gi|332740914|gb|EGJ71396.1| protein of unknown function DUF218 [Bacteroides coprosuis DSM
18011]
Length = 213
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 47/139 (33%), Gaps = 8/139 (5%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + P+ RI LY + K ++ISG D E
Sbjct: 50 GVILGTSKSLRTGAPNPYFIYRIEAAAALYHAGKID----KLVISG-DNSDKYYNEPRDM 104
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ G+ D++ ++ L T + + + ++S +H +R+ +
Sbjct: 105 KKALMAKGISEDNLFIDAAGLRTLDSMVRMKEIFQQT---TFTVISQKFHNERAIYLGRA 161
Query: 195 FGINTKASCSDYLNAYYSI 213
F ++ ++ +
Sbjct: 162 FSLDVIGFNAEDVGVVRGF 180
>gi|15805223|ref|NP_293911.1| sanA protein [Deinococcus radiodurans R1]
gi|6457856|gb|AAF09774.1|AE001881_3 sanA protein [Deinococcus radiodurans R1]
Length = 222
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 65/204 (31%), Gaps = 21/204 (10%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
++ + R +L + ++P ++ RP P
Sbjct: 6 LTPVKTRIRWRRWAAGGVGALLAGVLLPQIVVPLAAWG---RTFDRPEDLPARH------ 56
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V L GT+ + RI YK+ K +++SG D
Sbjct: 57 VGLVLGTSKYLASGRVNRYY----LYRIDAAEAAYKAGKVR----VLLLSG-DNSSVSYD 107
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E LLE G+ + + L+ T + ++ + + L+S +H +R+
Sbjct: 108 EPTTMKEDLLERGIPAEQLVLDYAGFRTLDSVVRAAEV---FGTRQFTLISQPFHNERAI 164
Query: 190 LYFQHFGINTKASCSDYLNAYYSI 213
+ G++ A + + +
Sbjct: 165 FLARTRGLDAAALNARDVTGRSGL 188
>gi|37525492|ref|NP_928836.1| hypothetical protein plu1545 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784920|emb|CAE13838.1| SanA protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 246
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 66/205 (32%), Gaps = 28/205 (13%)
Query: 32 LFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
L G I+ I L + + + + ++LG + P
Sbjct: 9 LLFITGMLILTAIALDRWMSWKTAPYVFDDLKQLPEREVGIVLGTAKYYLSGAPNQYYM- 67
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK 149
RI + Y S K +++SG + Q E + L+++G+ +I
Sbjct: 68 -----YRIQGAINAYNSDKIKY----LLLSGDNAQ-QSYNEPVTMRRDLVKAGIPAANIV 117
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNA 209
L+ T + + + + +++ +H +R+ H GI+ +
Sbjct: 118 LDFAGFRTLDSIVRTRKV---FNTNDFTIITQRFHCERALFIAMHMGIDAQCYAVSTPKN 174
Query: 210 YYSIIPLSANFYLTELALKEYIGIL 234
++ L+E I L
Sbjct: 175 MITVR------------LREIIARL 187
>gi|206580837|ref|YP_002237434.1| protein SanA [Klebsiella pneumoniae 342]
gi|288934358|ref|YP_003438417.1| hypothetical protein Kvar_1480 [Klebsiella variicola At-22]
gi|290508563|ref|ZP_06547934.1| hypothetical protein HMPREF0485_00334 [Klebsiella sp. 1_1_55]
gi|206569895|gb|ACI11671.1| protein SanA [Klebsiella pneumoniae 342]
gi|288889087|gb|ADC57405.1| protein of unknown function DUF218 [Klebsiella variicola At-22]
gi|289777957|gb|EFD85954.1| hypothetical protein HMPREF0485_00334 [Klebsiella sp. 1_1_55]
Length = 243
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L++ GV+ DI L+
Sbjct: 69 RIQGALNAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRRDLIKGGVDPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + + I+++ +H +R+ H GI + +S+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMWSV 178
>gi|296139977|ref|YP_003647220.1| hypothetical protein Tpau_2273 [Tsukamurella paurometabola DSM
20162]
gi|296028111|gb|ADG78881.1| protein of unknown function DUF218 [Tsukamurella paurometabola DSM
20162]
Length = 188
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 29/145 (20%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQH 110
+Y RP + + + IV+LG Y R + L +
Sbjct: 32 RAYIRP-RTIDELRPADAIVVLGG-----------------NPYDRFEYGITLA----ER 69
Query: 111 SMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK-LETQSLDTFQNAQFSSSMIK 169
+ +++S + +L + V + T AQ + +
Sbjct: 70 GLAPQVVLSNSVGAQDSRM------QQLCDERVPDVQVTCFLPVPWTTRGEAQELRRLAQ 123
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQH 194
+ II+V++ H++R++ +
Sbjct: 124 ERRWDEIIVVTTTAHVERARFILER 148
>gi|238499191|ref|XP_002380830.1| DUF218 domain protein [Aspergillus flavus NRRL3357]
gi|220692583|gb|EED48929.1| DUF218 domain protein [Aspergillus flavus NRRL3357]
Length = 266
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 11/80 (13%)
Query: 126 HGLAESIVYNNKLLESGVERDDI-------KLETQSLDTFQNAQFSSSMIKNMQG---KN 175
HGL E+ V L ++ +R I +E +S + NA S ++ K
Sbjct: 93 HGLPEARVLERIL-DTFFDRSAITDGGCMILVEDKSTNCGLNASLSRKILDAAGFHDLKT 151
Query: 176 IILVSSAYHLKRSQLYFQHF 195
I++ + R++ FQ
Sbjct: 152 CIIIQDPTMMLRTKASFQKA 171
>gi|90579756|ref|ZP_01235565.1| Putative SanA protein [Vibrio angustum S14]
gi|90439330|gb|EAS64512.1| Putative SanA protein [Vibrio angustum S14]
Length = 248
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 62/181 (34%), Gaps = 24/181 (13%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII------VLLGNGTTII 79
+ + + + I + T+L L + S + D + + ++LG I
Sbjct: 3 LLNLIRISAVICILFVSTLL---LFDRWVSARTSDRIYHDISAVPKHSVGLVLGTSKYIA 59
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
T+ RI + L+K K ++SG + E LL
Sbjct: 60 KTLNPYYEY-------RITAALDLFKQGKIDY----FLLSGDNA-HRSYNEPWTMKRDLL 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
++GV D I L+ T + + + + N +++ +H +R+ + I
Sbjct: 108 KAGVPDDKIVLDYAGFRTLDSIVRAKEVFE---TDNFTIITQQFHCERALFIADSYKIKA 164
Query: 200 K 200
Sbjct: 165 T 165
>gi|19114224|ref|NP_593312.1| conserved protein (fungal and protazoan) [Schizosaccharomyces pombe
972h-]
gi|3219937|sp|P87055|YDJ7_SCHPO RecName: Full=Uncharacterized protein C57A10.07
gi|2058374|emb|CAB08170.1| conserved protein (fungal and protazoan) [Schizosaccharomyces
pombe]
Length = 311
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 77/221 (34%), Gaps = 29/221 (13%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGN-IIV 70
+W +L R + ++L + I T+ LQ L+ Q K+ +I+
Sbjct: 23 FWRVLSPKSRTGIALYASLILLCIF-FTIFSTMSHPSLQCFSPTSLVGAQPLKNLTHLII 81
Query: 71 LLG-----NGTTIIPTIPAIRIEPSFQSYSRIFET-MRLYKSCKQHSMHCTIIISGGDPQ 124
+ G G+T +EP + ++F +R ++ SGG +
Sbjct: 82 VAGHAVWLGGSTNGEDDSEWILEPYQKGEGKVFAQHVRSGLDLLSQDDSSLLVFSGGQTR 141
Query: 125 KHGLAESIVYNNKLLESGVERD-----DIKLETQSLDTFQNAQFSSS---MIKNMQGKNI 176
S + L + D E + D+ +N FS + + + + I
Sbjct: 142 NGAGPSSEAQSYYSLSMQINSDEGLAARRTTEEFARDSLENVLFSVARFYEVTSRYPQKI 201
Query: 177 ILVSSAY--------HLKRSQLY----FQHFGINTKASCSD 205
+VS + H +++ + F GI+ + SD
Sbjct: 202 TVVSFDFKRDRFLNLH-RKAIKFPEHKFHFVGIDPEGGVSD 241
>gi|307717731|ref|YP_003873263.1| hypothetical protein STHERM_c00140 [Spirochaeta thermophila DSM
6192]
gi|306531456|gb|ADN00990.1| hypothetical protein STHERM_c00140 [Spirochaeta thermophila DSM
6192]
Length = 195
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF-------GINTKAS-CSD 205
S T+++A+ + S + I++V+ YH R+ L F+ G+ + +D
Sbjct: 102 SASTYEDARITKSFLSERGLSKILIVTDWYHAWRTLLVFERVLGKEVEIGLELSSVPPTD 161
Query: 206 YLNAYYSII 214
+Y ++
Sbjct: 162 DAVRWYGVL 170
>gi|152971124|ref|YP_001336233.1| hypothetical protein KPN_02585 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262040162|ref|ZP_06013415.1| membrane protein SanA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|150955973|gb|ABR78003.1| vancomycin sensitivity [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|259042515|gb|EEW43533.1| membrane protein SanA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 238
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L++ GV+ DI L+
Sbjct: 69 RIQGALNAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRRDLIKGGVDPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + + I+++ +H +R+ H GI + +S+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMWSV 178
>gi|162149067|ref|YP_001603528.1| hypothetical protein GDI_3297 [Gluconacetobacter diazotrophicus PAl
5]
gi|161787644|emb|CAP57240.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 197
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 56/178 (31%), Gaps = 27/178 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
++ L P + IV L G RI ++RL +
Sbjct: 23 FRDALRPPAMPPIADGIVALTGG------------------QGRIEASLRLLAQGRGRQ- 63
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERD---DIKLETQSLDTFQNAQFSSSMIK 169
++ISG P + + + G+ + L + T NA ++
Sbjct: 64 ---LLISGVAPHATTGSVASRLQPQGGGDGIPAALWRHVTLGRHATSTIGNADETAEWAH 120
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPLSANFYLTEL 225
++I+V++ YH++R+ + + GI + S TE
Sbjct: 121 ANAIHSLIVVTAGYHIRRATMEIRRTVPGIVLYPYPIQPPALQAPLRVASVRLMATEY 178
>gi|111022697|ref|YP_705669.1| hypothetical protein RHA1_ro05733 [Rhodococcus jostii RHA1]
gi|110822227|gb|ABG97511.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 205
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 50/180 (27%), Gaps = 40/180 (22%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y RP + P + + IV+LG Y R + L +
Sbjct: 53 YVRPQIDP--LRTADAIVVLGG-----------------TPYERFDIGVELA----ERGY 89
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL---ETQSLDTFQNAQFSSSMIK 169
++IS + D + E T AQ
Sbjct: 90 APQLVISNSVGSGD-----RTMDKYCHSHF----DFVVSCFEPDPWTTKGEAQEIGRRAA 140
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQH-FGINTKASCSDYLNAYYSIIPLSANFYLTELALK 228
+II+V+ H+ R++ + F S S +P A Y+ + A
Sbjct: 141 QQGWHHIIVVTFTPHISRARYIVEKCFDGEVTMVAS----PTPSGLPFWAGMYIRQSAGY 196
>gi|254481013|ref|ZP_05094259.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
gi|214038808|gb|EEB79469.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
Length = 198
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 45/114 (39%), Gaps = 8/114 (7%)
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P + + SR+ + LY + + +++ G + N L
Sbjct: 39 PEKAEVGVVLGGGGGSRLRAGLSLYDAGFVSQL---LLVDGKKSAWE-----HIQKNLCL 90
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ ++ D+++ S +T +A+ + ++++++ YH +R+ L F
Sbjct: 91 DCAIDGKDVRVLEGSTNTLSDAELVEQFCLENRVSSLLIITDPYHTRRASLIFH 144
>gi|169778635|ref|XP_001823782.1| hypothetical protein AOR_1_14094 [Aspergillus oryzae RIB40]
gi|83772521|dbj|BAE62649.1| unnamed protein product [Aspergillus oryzae]
Length = 266
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 11/80 (13%)
Query: 126 HGLAESIVYNNKLLESGVERDDI-------KLETQSLDTFQNAQFSSSMIKNMQG---KN 175
HGL E+ V L ++ +R I +E +S + NA S ++ K
Sbjct: 93 HGLPEARVLERIL-DTFFDRSAITDGGCMILVEDKSTNCGLNASLSRKILDAAGFHNLKT 151
Query: 176 IILVSSAYHLKRSQLYFQHF 195
I++ + R++ FQ
Sbjct: 152 CIIIQDPTMMLRTKASFQKA 171
>gi|260598609|ref|YP_003211180.1| vancomycin high temperature exclusion protein [Cronobacter
turicensis z3032]
gi|260217786|emb|CBA32240.1| Protein sanA [Cronobacter turicensis z3032]
Length = 216
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 56/147 (38%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + Q E + L+ +GV+ DI L+
Sbjct: 48 RIQGALNAYNSGKVNY----LLLSGDNAQ-QSYNEPMTMRKDLIAAGVDPADIVLDYAGF 102
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S + L+
Sbjct: 103 RTLDSIVRTRRVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKNMLSVRV 159
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 160 REFGARLGALADLYIFKREPRFLGPLV 186
>gi|253688059|ref|YP_003017249.1| hypothetical protein PC1_1672 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754637|gb|ACT12713.1| protein of unknown function DUF218 [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 259
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 10/112 (8%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ T+ Y S K +++SG + E + L+ +GV DI L+
Sbjct: 69 RMQGTINAYNSGKVSY----LLLSGDNA-LQSYNEPMTMRRDLIAAGVPPSDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK--ASCSD 205
T + + + + +++ +H +R+ H GI + A S
Sbjct: 124 RTLDSIVRTRKVFD---TNDFTIITQRFHCERALFIALHLGIQAQCYAVPSP 172
>gi|227112052|ref|ZP_03825708.1| hypothetical protein PcarbP_03753 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 259
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 10/112 (8%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ T+ Y S K +++SG + E + L+ +GV DI L+
Sbjct: 69 RMQGTINAYNSGKVSY----LLLSGDNA-LQSYNEPMTMRRDLIAAGVPPSDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK--ASCSD 205
T + + + + +++ +H +R+ H GI + A S
Sbjct: 124 RTLDSIVRTRKVFD---TNDFTIITQRFHCERALFIALHLGIQAQCYAVPSP 172
>gi|304397472|ref|ZP_07379350.1| protein of unknown function DUF218 [Pantoea sp. aB]
gi|304355090|gb|EFM19459.1| protein of unknown function DUF218 [Pantoea sp. aB]
Length = 239
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 69/198 (34%), Gaps = 23/198 (11%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTIL-LKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTI 78
++++ F++L + + K F Y+ P + V+LG
Sbjct: 2 LKRVSIGLLFIILLMMATALCLDRWISWKTAPFIYENVASLPHRQVG----VVLGTAKYY 57
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
+ RI + Y S K + +++SG + E + L
Sbjct: 58 RTGVINQYY------LYRIQGALNAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRRDL 106
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+++GV+ DI L+ T + + + + I+++ +H +R+ GI
Sbjct: 107 IKAGVDPADIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALQLGIQ 163
Query: 199 TK----ASCSDYLNAYYS 212
+ S + L+ +
Sbjct: 164 AQCYAVPSPKNMLSVRFR 181
>gi|209545186|ref|YP_002277415.1| hypothetical protein Gdia_3070 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532863|gb|ACI52800.1| protein of unknown function DUF218 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 213
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 56/178 (31%), Gaps = 27/178 (15%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
++ L P + IV L G RI ++RL +
Sbjct: 39 FRDALRPPAMPPIADGIVALTGG------------------QGRIEASLRLLAQGRGRQ- 79
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERD---DIKLETQSLDTFQNAQFSSSMIK 169
++ISG P + + + G+ + L + T NA ++
Sbjct: 80 ---LLISGVAPHATTGSVASRLQPQGGGDGIPAALWRHVTLGRHATSTIGNADETAEWAH 136
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPLSANFYLTEL 225
++I+V++ YH++R+ + + GI + S TE
Sbjct: 137 ANAIHSLIVVTAGYHIRRATMEIRRTVPGIVLYPYPIQPPALQAPLRVASVRLMATEY 194
>gi|238793455|ref|ZP_04637080.1| hypothetical protein yinte0001_23610 [Yersinia intermedia ATCC
29909]
gi|238727228|gb|EEQ18757.1| hypothetical protein yinte0001_23610 [Yersinia intermedia ATCC
29909]
Length = 253
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 12/123 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + E + L+ +GV DI L+
Sbjct: 69 RIQGAINAYNSGKVSY----LLLSGDNA-LQSYNEPMTMRRDLIAAGVAPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D LN
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCFAVPSPKDMLNVRV 180
Query: 212 SII 214
I
Sbjct: 181 REI 183
>gi|226330831|ref|ZP_03806349.1| hypothetical protein PROPEN_04752 [Proteus penneri ATCC 35198]
gi|225201626|gb|EEG83980.1| hypothetical protein PROPEN_04752 [Proteus penneri ATCC 35198]
Length = 163
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 40/105 (38%), Gaps = 8/105 (7%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + KH E L+++G+ I ++
Sbjct: 56 RIQGAVNAYNSGKIQY----LLLSGDNA-KHSYNEPNTMRKDLIKAGIPASRIVMDFAGF 110
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
T + + + +++ +H +R+ GI+ +
Sbjct: 111 RTLDSVVRTKEV---FGTDGFTIITQRFHCERAVFIALEKGIDAQ 152
>gi|238895711|ref|YP_002920446.1| hypothetical protein KP1_3812 [Klebsiella pneumoniae NTUH-K2044]
gi|238548028|dbj|BAH64379.1| vancomycin resistance protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 238
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L++ GV+ DI L+
Sbjct: 69 RIQGALNAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRRDLIKGGVDPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN----TKASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI S D +
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYVVPSPKDMWSVRL 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G LI
Sbjct: 181 REFGARFGALADLYIFKREPRFLGPLI 207
>gi|169628110|ref|YP_001701759.1| hypothetical protein MAB_1015c [Mycobacterium abscessus ATCC 19977]
gi|169240077|emb|CAM61105.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length = 204
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 57/208 (27%), Gaps = 55/208 (26%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ R+ + C + G+ Y P P + + IV+LG
Sbjct: 24 KPRRRRILLVCITVTVLLAGFITAG-------WRVYMNPQTDP--LRPADAIVVLGG--- 71
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
Y R + L K ++IS +
Sbjct: 72 --------------TPYERFDVGLDLAK----RGYAPYLLISQSTGADD-----RNMDKY 108
Query: 138 L-------LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
+ + T AQ S + + +II+++ H+ R++
Sbjct: 109 CKGHFTFTVSCFIPD--------PWTTEGEAQEIRSKAQELGWHHIIVITFTPHVSRARY 160
Query: 191 Y----FQHFGINTKASCSDYLNAYYSII 214
F + AS + A++S +
Sbjct: 161 IVGKCFDGE-LTMVASPAPSGVAFWSWM 187
>gi|156933279|ref|YP_001437195.1| hypothetical protein ESA_01091 [Cronobacter sakazakii ATCC BAA-894]
gi|156531533|gb|ABU76359.1| hypothetical protein ESA_01091 [Cronobacter sakazakii ATCC BAA-894]
Length = 237
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 56/147 (38%), Gaps = 15/147 (10%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + Q E + L+ +GV+ DI L+
Sbjct: 69 RIQGALNAYNSGKVNY----LLLSGDNAQ-QSYNEPMTMRKDLIAAGVDPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S + L+
Sbjct: 124 RTLDSIVRTRRVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKNMLSVRV 180
Query: 212 S-IIPLSANFYLTELALKE--YIGILI 235
+ +E ++G L+
Sbjct: 181 REFGARLGALADLYIFKREPRFLGPLV 207
>gi|315445625|ref|YP_004078504.1| hypothetical protein Mspyr1_40830 [Mycobacterium sp. Spyr1]
gi|315263928|gb|ADU00670.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length = 188
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 55/178 (30%), Gaps = 42/178 (23%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
R + S L+ G T+L Q + IV+LG
Sbjct: 2 SRRRLLIPASMAALVVILFLNGASGTLLFARAQA---------DPLAKVDAIVVLGGEHD 52
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
R + L + T+++S +P A V
Sbjct: 53 -----------------GREAYGVGLAEQ----GYADTVLLS--NPYHGTDA---VMAEA 86
Query: 138 LLESGVERDDIKLETQS---LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
R DI++ ++ T A + ++ + +II+VS YHL R++ F
Sbjct: 87 CQ----PRSDIEVICKAPVPGTTRGEALMARALAEARDWNSIIVVSWRYHLPRARKIF 140
>gi|255323748|ref|ZP_05364876.1| putative secreted protein [Corynebacterium tuberculostearicum
SK141]
gi|255299238|gb|EET78527.1| putative secreted protein [Corynebacterium tuberculostearicum
SK141]
Length = 195
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 47/173 (27%), Gaps = 24/173 (13%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IVL GT P SRI + + +I GG
Sbjct: 4 AIVL---GTAQYDGRP-----------SRILAGRLRHAGELATAEGLEVITVGGKLPGDR 49
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ V L E + + +DT + + +++ H R
Sbjct: 50 FTEAGVGRTYLRE-HFPHLTVHAVEEGMDTRSSLSAVKE---AFALSDATIITDPLHRLR 105
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ L + GI S + Y A P E G+ A G
Sbjct: 106 TALIARQEGITATVSGTPYYPAARFSKPWWRYLA------HETGGVAYALVAG 152
>gi|326335887|ref|ZP_08202064.1| membrane protein SanA [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691851|gb|EGD33813.1| membrane protein SanA [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 223
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ + L+K+ K I+ISG + K E + L+ G+ D I L+
Sbjct: 81 RVEAAVALFKAGKIDF----ILISGDNSTKEND-EPTDFKKALIALGIPADRIYLDYAGF 135
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + + ++S A+H +R+ Q GI + ++ Y +
Sbjct: 136 RTLDSVIRAREV---FGLTQMAIISQAFHNERAIYIAQKKGIKAVGFNAKDVDKYIGL 190
>gi|113461220|ref|YP_719289.1| SanA protein [Haemophilus somnus 129PT]
gi|112823263|gb|ABI25352.1| SanA protein [Haemophilus somnus 129PT]
Length = 231
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 72/194 (37%), Gaps = 17/194 (8%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
++++ +F+F II + ++Q + ++ G ++LG
Sbjct: 18 VKRLLHYGFAFSIFTFFSLIIIDRSIAWYVQDRIYTKIEELPYRPYG---IVLGTAKYFS 74
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
P + +R+ T+ L+K K +++SG D + E I L
Sbjct: 75 KNNPNLYYN------NRLTATVELFKQEKIDY----LLLSG-DNRTMQYNEPITMFKDLR 123
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+ + D + ++ T + + + K + + +++ +H +R+ + + I+
Sbjct: 124 KMDIPEDVMYMDFAGFRTLDSVIRADKVFKA---QPMTIITQQFHCERALFIAKFYDIDA 180
Query: 200 KASCSDYLNAYYSI 213
+ Y S+
Sbjct: 181 ICFAAKSPANYLSV 194
>gi|307249667|ref|ZP_07531652.1| hypothetical protein appser4_4760 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858300|gb|EFM90371.1| hypothetical protein appser4_4760 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 196
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 26/169 (15%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + + R+ ++L K +++SG + +
Sbjct: 37 VVLGTSKFYAKGTANLYYK------YRLEAAVQLINKGKAK----KLLVSGDNKTPY-YN 85
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E V N L G+ ++ I+ + T + +S + K + I+VS +H +R+
Sbjct: 86 EPKVMLNDLYNMGIPKNMIEQDFAGYRTLDSIVRASKVYK---LEPFIIVSQQFHCERAL 142
Query: 190 LYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYY 238
++ IN + Y + + L+E++ + +
Sbjct: 143 FIAKYHNINAVCFAAKYPEGHIKVR------------LREFLARIGMIW 179
>gi|329999121|ref|ZP_08303325.1| protein SanA [Klebsiella sp. MS 92-3]
gi|328538451|gb|EGF64569.1| protein SanA [Klebsiella sp. MS 92-3]
Length = 232
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L++ GV+ DI L+
Sbjct: 69 RIQGALNAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRRDLIKGGVDPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
T + + + + I+++ +H +R+ H GI + +S+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMWSV 178
>gi|304311070|ref|YP_003810668.1| Putative SanA protein [gamma proteobacterium HdN1]
gi|301796803|emb|CBL45015.1| Putative SanA protein [gamma proteobacterium HdN1]
Length = 247
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 26/210 (12%), Positives = 74/210 (35%), Gaps = 21/210 (10%)
Query: 18 QSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTT 77
+ R F++ F+ + F+ + ++ ++V+LG
Sbjct: 18 RIARWGSFVAGFVSIVLFLCDFSVSASTQSAIKTQIGEVPEHS-------VVVVLG---- 66
Query: 78 IIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNK 137
+P+ ++ P +++ R+ +LY++ K + +++SG + E
Sbjct: 67 TSWRLPSGKVNPYYKA--RVDAVDQLYRAGKVQA----VVVSGDNATPQ-YNEPRKLRKD 119
Query: 138 LLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGI 197
L+ G+ I ++ T + + + + + ++VS + ++R+ + I
Sbjct: 120 LIARGIPAGMITMDFAGFRTLDSVVRAREVFR---LDHFVVVSQRFQIERALYIAKAHQI 176
Query: 198 NTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ + + + F L
Sbjct: 177 DAIGFVAKDPQTFGWRVRSREVFARFLAVL 206
>gi|222096959|ref|YP_002531016.1| hypothetical protein BCQ_3299 [Bacillus cereus Q1]
gi|221241017|gb|ACM13727.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 225
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 30/125 (24%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG-- 121
+ + I + G P P + Y+ + II++GG
Sbjct: 32 QKCDAIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNQIIVTGGTS 70
Query: 122 -------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
L+++ V KL+E GV +D I E SL + N + + +
Sbjct: 71 LHGMKHPSWNYGDLSDAEVIVTKLMEHGVPKDAILFEKNSLHSIANVMEAKKIFDFTKIN 130
Query: 175 NIILV 179
++ V
Sbjct: 131 QLLFV 135
>gi|217960902|ref|YP_002339468.1| hypothetical protein BCAH187_A3524 [Bacillus cereus AH187]
gi|229140111|ref|ZP_04268671.1| hypothetical protein bcere0013_32140 [Bacillus cereus BDRD-ST26]
gi|217065291|gb|ACJ79541.1| conserved domain protein [Bacillus cereus AH187]
gi|228643366|gb|EEK99637.1| hypothetical protein bcere0013_32140 [Bacillus cereus BDRD-ST26]
Length = 225
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 30/125 (24%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG-- 121
+ + I + G P P + Y+ + II++GG
Sbjct: 32 QKCDAIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNQIIVTGGTS 70
Query: 122 -------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
L+++ V KL+E GV +D I E SL + N + + +
Sbjct: 71 LHGMKHPSWNYGDLSDAEVIVTKLMEHGVPKDAILFEKNSLHSIANVMEAKKIFDFTKIN 130
Query: 175 NIILV 179
++ V
Sbjct: 131 QLLFV 135
>gi|227325861|ref|ZP_03829885.1| hypothetical protein PcarcW_00504 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 259
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 10/112 (8%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
R+ T+ Y S K +++SG + E + L+ +GV DI L+
Sbjct: 69 RMQGTINAYNSGKVSY----LLLSGDNA-LQSYNEPMTMRRDLIAAGVPPSDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK--ASCSD 205
T + + + + +++ +H +R+ H GI + A S
Sbjct: 124 RTLDSIIRTRKVFD---TNDFTIITQRFHCERALFIALHLGIQAQCYAVPSP 172
>gi|34558162|ref|NP_907977.1| hypothetical protein WS1867 [Wolinella succinogenes DSM 1740]
gi|34483881|emb|CAE10877.1| hypothetical protein WS1867 [Wolinella succinogenes]
Length = 214
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 58/184 (31%), Gaps = 29/184 (15%)
Query: 47 KHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKS 106
L Y ++ + I++LG SR+ + L K+
Sbjct: 21 HELLERYALLFCIDTAQRGADAILVLGG-----------------NKSSRLPHAISLLKA 63
Query: 107 CKQHSMHCTII--ISGGDPQKHGLAESIVYNNKLLESGVERDDI-KLETQSLDTFQNAQF 163
+ T + S ES + L + I L+ + T+ A
Sbjct: 64 GYAPLLLVTEVKRYSNQTFDGLLRHESDEVVHILSSLHLPHHLIPSLKGGATSTYDEAYD 123
Query: 164 SSSMIKNMQGKNIILVSSAYHLKRSQLYF---------QHFGINTKASCSDYLNAYYSII 214
+ K+ ++II+V+ A+H +R+ F + I + + + N +
Sbjct: 124 FFAYAKDSNIRSIIIVTDAFHTRRALGAFLKVQRRLQEEKIQIQISPAPNTHFNEKDWYL 183
Query: 215 PLSA 218
+
Sbjct: 184 TEAG 187
>gi|311741378|ref|ZP_07715202.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303548|gb|EFQ79627.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 195
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 47/173 (27%), Gaps = 24/173 (13%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
IVL GT P SRI + + +I GG
Sbjct: 4 AIVL---GTAQYDGRP-----------SRILAGRLRHAGELATAKGLEVITVGGKLPGDR 49
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E+ V L E + + +DT + + +++ H R
Sbjct: 50 FTEAGVGRTYLRE-HFPHLTVHAVEEGMDTRSSLSAVKE---AFALSDATIITDPLHRLR 105
Query: 188 SQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIAYYRG 240
+ L + GI S + Y A P E G+ A G
Sbjct: 106 TALIARQEGIAATVSGTPYYPAARFSKPWWRYLA------HETGGVAYALVAG 152
>gi|269139905|ref|YP_003296606.1| hypothetical protein ETAE_2560 [Edwardsiella tarda EIB202]
gi|267985566|gb|ACY85395.1| hypothetical protein ETAE_2560 [Edwardsiella tarda EIB202]
gi|304559740|gb|ADM42404.1| hypothetical protein ETAF_2301 [Edwardsiella tarda FL6-60]
Length = 258
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
I LE+ S + +NA+F+ ++++ ++LV +R+ FQ +
Sbjct: 110 PSQIWLESASTNCGENARFARALLQEKGATPSRLLLVQDPLMQRRTLATFQRV---WQDC 166
Query: 203 CSDYLNAYYSIIPL 216
+ ++ + +P
Sbjct: 167 PTVQFASWPTFVPR 180
>gi|242239729|ref|YP_002987910.1| hypothetical protein Dd703_2304 [Dickeya dadantii Ech703]
gi|242131786|gb|ACS86088.1| protein of unknown function DUF218 [Dickeya dadantii Ech703]
Length = 250
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 18/188 (9%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTII 79
+ K F L + + Y + + V+LG
Sbjct: 1 MWKRVIFGLFTSLLVLACTAFLLDRCISWRTAPYIYDDVQDLPSRQVG--VVLGTAKYYR 58
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
+ RI + Y S K +++SG D E + L+
Sbjct: 59 AGVINQYY------LFRIQGALNAYNSGKISY----LLLSG-DNSLQSYNEPMTMRRDLI 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
+GV+ DI L+ T + + + + +++ +H +R+ H GI
Sbjct: 108 AAGVQPVDIVLDYAGFRTLDSIVRTRKVFD---TNDFTIITQRFHCERALFIALHKGIQA 164
Query: 200 K--ASCSD 205
+ A S
Sbjct: 165 QCFAVPSP 172
>gi|238757214|ref|ZP_04618401.1| hypothetical protein yaldo0001_11130 [Yersinia aldovae ATCC 35236]
gi|238704592|gb|EEP97122.1| hypothetical protein yaldo0001_11130 [Yersinia aldovae ATCC 35236]
Length = 257
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 12/123 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + E + L+ +GV DI L+
Sbjct: 69 RIQGALNAYNSGKVSY----LLLSGDNA-LQSYNEPMTMRRDLIAAGVAPSDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S + LN
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIAMHMGIQAQCFAVPSPKNMLNVRV 180
Query: 212 SII 214
I
Sbjct: 181 REI 183
>gi|170024788|ref|YP_001721293.1| hypothetical protein YPK_2563 [Yersinia pseudotuberculosis YPIII]
gi|169751322|gb|ACA68840.1| protein of unknown function DUF218 [Yersinia pseudotuberculosis
YPIII]
Length = 245
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 10/112 (8%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + Q H E + L+ +GV DI L+
Sbjct: 69 RIQGAINAYNSGKISY----LLLSGDNAQ-HSYNEPMTMRRDLIAAGVAPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK--ASCSD 205
T + + + + I+++ +H +R+ + GI + A S
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIAMYMGIQAQCFAVPSP 172
>gi|315121772|ref|YP_004062261.1| hypothetical protein CKC_00110 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495174|gb|ADR51773.1| hypothetical protein CKC_00110 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 188
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 60/172 (34%), Gaps = 44/172 (25%)
Query: 23 IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTI 82
IFF+ F+L +I IP N IV+L
Sbjct: 13 IFFIGGFVLFIQYIVQIPIPA-------------------NPSINAIVVLTG-------- 45
Query: 83 PAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESG 142
+RI + L ++ + + ISG H +++ I+ +
Sbjct: 46 ----------EPNRIEKAFELL----ENKIGQRVFISG---VHHSVSKDILLQKIPIRKD 88
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+ + + ++L+T NA+ + I+ ++++++ YH+ R L
Sbjct: 89 LAECCVDIGYKALNTAGNAKEALEWIRKHDYHHVLIITHDYHIPRILLELNR 140
>gi|150016976|ref|YP_001309230.1| hypothetical protein Cbei_2107 [Clostridium beijerinckii NCIMB
8052]
gi|149903441|gb|ABR34274.1| protein of unknown function DUF218 [Clostridium beijerinckii NCIMB
8052]
Length = 201
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 124 QKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIK--NMQGKNIILVSS 181
E + + +GV D I E + T +NA S + N+ K I+
Sbjct: 78 NGEYNTEWEFMRDIAISNGVNGDAILKEDNATWTKENAFKSKEVTDNYNLDIKKAIICCK 137
Query: 182 AYHLKRSQLYF 192
++H KR +++
Sbjct: 138 SFHAKRCLMFY 148
>gi|238749939|ref|ZP_04611443.1| hypothetical protein yrohd0001_37080 [Yersinia rohdei ATCC 43380]
gi|238711868|gb|EEQ04082.1| hypothetical protein yrohd0001_37080 [Yersinia rohdei ATCC 43380]
Length = 259
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 12/123 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + E + L+ +GV DI L+
Sbjct: 69 RIQGAINAYNSGKVSY----LLLSGDNA-LQSYNEPMTMRRDLIAAGVAPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S + LN
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIAMHMGIQAQCFAVPSPKNMLNVRV 180
Query: 212 SII 214
I
Sbjct: 181 REI 183
>gi|197284538|ref|YP_002150410.1| hypothetical protein PMI0641 [Proteus mirabilis HI4320]
gi|227356718|ref|ZP_03841104.1| membrane protein [Proteus mirabilis ATCC 29906]
gi|194682025|emb|CAR41516.1| putative transport protein [Proteus mirabilis HI4320]
gi|227163226|gb|EEI48157.1| membrane protein [Proteus mirabilis ATCC 29906]
Length = 241
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 40/105 (38%), Gaps = 8/105 (7%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + Q H E L+++G+ I ++
Sbjct: 69 RIQGAVNAYNSGKVQY----LLLSGDNAQ-HSYNEPNTMRKDLIKAGIPASRIVMDFAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
T + + + +++ +H +R+ GI+ +
Sbjct: 124 RTLDSVVRTKEV---FGTDGFTIITQRFHCERAVFIALEKGIDAQ 165
>gi|22126538|ref|NP_669961.1| hypothetical protein y2659 [Yersinia pestis KIM 10]
gi|45441225|ref|NP_992764.1| hypothetical protein YP_1400 [Yersinia pestis biovar Microtus str.
91001]
gi|51595862|ref|YP_070053.1| hypothetical protein YPTB1525 [Yersinia pseudotuberculosis IP
32953]
gi|108806802|ref|YP_650718.1| hypothetical protein YPA_0805 [Yersinia pestis Antiqua]
gi|108812630|ref|YP_648397.1| hypothetical protein YPN_2469 [Yersinia pestis Nepal516]
gi|145598748|ref|YP_001162824.1| hypothetical protein YPDSF_1464 [Yersinia pestis Pestoides F]
gi|149366431|ref|ZP_01888465.1| putative exported protein [Yersinia pestis CA88-4125]
gi|153948508|ref|YP_001401433.1| hypothetical protein YpsIP31758_2464 [Yersinia pseudotuberculosis
IP 31758]
gi|162419195|ref|YP_001607389.1| hypothetical protein YpAngola_A3021 [Yersinia pestis Angola]
gi|165924495|ref|ZP_02220327.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939644|ref|ZP_02228188.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
IP275]
gi|166009292|ref|ZP_02230190.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211809|ref|ZP_02237844.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400421|ref|ZP_02305934.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421767|ref|ZP_02313520.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424377|ref|ZP_02316130.1| putative sanA protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|186894949|ref|YP_001872061.1| hypothetical protein YPTS_1635 [Yersinia pseudotuberculosis PB1/+]
gi|218928651|ref|YP_002346526.1| hypothetical protein YPO1510 [Yersinia pestis CO92]
gi|229841490|ref|ZP_04461649.1| hypothetical protein YPH_3876 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229843602|ref|ZP_04463745.1| hypothetical protein YPF_1990 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229894294|ref|ZP_04509477.1| hypothetical protein YPS_2067 [Yersinia pestis Pestoides A]
gi|229903025|ref|ZP_04518141.1| hypothetical protein YP516_2782 [Yersinia pestis Nepal516]
gi|270486819|ref|ZP_06203893.1| protein SanA [Yersinia pestis KIM D27]
gi|294503487|ref|YP_003567549.1| hypothetical protein YPZ3_1377 [Yersinia pestis Z176003]
gi|21959539|gb|AAM86212.1|AE013868_6 putative oxidoreductase [Yersinia pestis KIM 10]
gi|45436085|gb|AAS61641.1| putative exported protein [Yersinia pestis biovar Microtus str.
91001]
gi|51589144|emb|CAH20764.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
gi|108776278|gb|ABG18797.1| hypothetical protein YPN_2469 [Yersinia pestis Nepal516]
gi|108778715|gb|ABG12773.1| hypothetical protein YPA_0805 [Yersinia pestis Antiqua]
gi|115347262|emb|CAL20156.1| putative exported protein [Yersinia pestis CO92]
gi|145210444|gb|ABP39851.1| hypothetical protein YPDSF_1464 [Yersinia pestis Pestoides F]
gi|149290805|gb|EDM40880.1| putative exported protein [Yersinia pestis CA88-4125]
gi|152960003|gb|ABS47464.1| putative sanA protein [Yersinia pseudotuberculosis IP 31758]
gi|162352010|gb|ABX85958.1| putative sanA protein [Yersinia pestis Angola]
gi|165912441|gb|EDR31074.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
IP275]
gi|165923555|gb|EDR40687.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165991847|gb|EDR44148.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207580|gb|EDR52060.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960252|gb|EDR56273.1| putative sanA protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167050370|gb|EDR61778.1| putative sanA protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057226|gb|EDR66989.1| putative sanA protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|186697975|gb|ACC88604.1| protein of unknown function DUF218 [Yersinia pseudotuberculosis
PB1/+]
gi|229679935|gb|EEO76035.1| hypothetical protein YP516_2782 [Yersinia pestis Nepal516]
gi|229689210|gb|EEO81273.1| hypothetical protein YPF_1990 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229697856|gb|EEO87903.1| hypothetical protein YPH_3876 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229703692|gb|EEO90708.1| hypothetical protein YPS_2067 [Yersinia pestis Pestoides A]
gi|262361530|gb|ACY58251.1| hypothetical protein YPD4_1343 [Yersinia pestis D106004]
gi|262365731|gb|ACY62288.1| hypothetical protein YPD8_1605 [Yersinia pestis D182038]
gi|270335323|gb|EFA46100.1| protein SanA [Yersinia pestis KIM D27]
gi|294353946|gb|ADE64287.1| hypothetical protein YPZ3_1377 [Yersinia pestis Z176003]
gi|320015619|gb|ADV99190.1| hypothetical protein YPC_2643 [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 245
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 10/112 (8%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + Q H E + L+ +GV DI L+
Sbjct: 69 RIQGAINAYNSGKISY----LLLSGDNAQ-HSYNEPMTMRRDLIAAGVAPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK--ASCSD 205
T + + + + I+++ +H +R+ + GI + A S
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIAMYMGIQAQCFAVPSP 172
>gi|42782564|ref|NP_979811.1| hypothetical protein BCE_3513 [Bacillus cereus ATCC 10987]
gi|42738490|gb|AAS42419.1| conserved domain protein [Bacillus cereus ATCC 10987]
Length = 225
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 30/125 (24%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG-- 121
+ + I + G P P + Y+ + II++GG
Sbjct: 32 QKCDAIFVFGGSH------PGNWQAP-----------LEAYRQ----GLGNQIIVTGGTS 70
Query: 122 -------DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
L+++ V KL+E GV +D I E SL + N + + +
Sbjct: 71 LHGMKHPSWNYGDLSDAEVIVTKLIEHGVPKDAIMFEKNSLHSIANVIEAKKIFDFTKIN 130
Query: 175 NIILV 179
++ V
Sbjct: 131 RLLFV 135
>gi|33239613|ref|NP_874555.1| hypothetical protein Pro0161 [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237138|gb|AAP99207.1| Uncharacterized conserved protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 194
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 54/170 (31%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEP 89
+++ F+ II L+ L+ SPQ I++LG
Sbjct: 9 LIILGFLTLIIIMKPLVPFLKSRLSN--NSPQL------ILVLGG--------------- 45
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGD--------PQKHGLAESIVYNNKLLES 141
R ++ K K ++ISGG QK G++ ++V +
Sbjct: 46 ---EVDREIIGIKFAKELKM-----PLLISGGSNPEYSDWLIQKEGISTALVKRDY---- 93
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
++ DT N + + +I+L++S YH+ R+++
Sbjct: 94 -----------RAKDTLTNFTSIVDDLADENINHILLITSEYHINRAKIV 132
>gi|320539127|ref|ZP_08038798.1| putative conserved hypothetical protein [Serratia symbiotica str.
Tucson]
gi|320030765|gb|EFW12773.1| putative conserved hypothetical protein [Serratia symbiotica str.
Tucson]
Length = 247
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 52/136 (38%), Gaps = 13/136 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + Q E + L+ +GV DI L+
Sbjct: 69 RIQRAINAYNSGKVQY----LLLSGDNAQ-QSYNEPMTMRRDLIAAGVAPGDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ + GI + S D +
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALYRGIQAQCYAVPSPKDMMTVRA 180
Query: 212 SIIPLSANFYLTELAL 227
I + LT+L +
Sbjct: 181 REI-FARLAALTDLYI 195
>gi|330445903|ref|ZP_08309555.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328490094|dbj|GAA04052.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 250
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 24/181 (13%)
Query: 26 MSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII------VLLGNGTTII 79
+ + + + I + ++L L + S + D + + ++LG I
Sbjct: 3 LLNLIRISAVICILFVSSLL---LLDRWVSARTSDRIYHDISAVPKHSVGLVLGTSKYIA 59
Query: 80 PTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLL 139
T+ RI + LYK K ++SG + E LL
Sbjct: 60 KTLNPYYEY-------RITAALDLYKQGKIDY----FLLSGDNA-HRSYNEPWTMKRDLL 107
Query: 140 ESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINT 199
++GV D I L+ T + + + N +++ +H +R+ + I
Sbjct: 108 KAGVPDDKIALDYAGFRTLDSVVRAKEVFDA---DNFTIITQQFHCERALFIADSYKIKA 164
Query: 200 K 200
Sbjct: 165 I 165
>gi|238799250|ref|ZP_04642697.1| hypothetical protein ymoll0001_39300 [Yersinia mollaretii ATCC
43969]
gi|238716915|gb|EEQ08784.1| hypothetical protein ymoll0001_39300 [Yersinia mollaretii ATCC
43969]
Length = 253
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 12/123 (9%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + E + L+ +GV DI L+
Sbjct: 69 RIQGAINAYNSGKVSY----LLLSGDNA-LQSYNEPMTMRRDLIAAGVAPADIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK----ASCSDYLNAYY 211
T + + + + I+++ +H +R+ H GI + S D L+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERALFIALHMGIQAQCFAVPSPKDMLSVRV 180
Query: 212 SII 214
I
Sbjct: 181 REI 183
>gi|308187522|ref|YP_003931653.1| Protein sanA [Pantoea vagans C9-1]
gi|308058032|gb|ADO10204.1| Protein sanA [Pantoea vagans C9-1]
Length = 239
Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 53/147 (36%), Gaps = 18/147 (12%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + R+ + Y S K + +++SG +
Sbjct: 49 VVLGTAKYYRTGVINQYY------LYRMQGALNAYNSGKVNY----LLLSGDNA-LQSYN 97
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + L+++GV+ DI L+ T + + + + I+++ +H +R+
Sbjct: 98 EPMTMRRDLIKAGVDPADIVLDYAGFRTLDSIVRTRKVFD---TNDFIIITQRFHCERAL 154
Query: 190 LYFQHFGINTK----ASCSDYLNAYYS 212
GI + S + L+ +
Sbjct: 155 FIALQLGIQAQCYAVPSPKNMLSVRFR 181
>gi|227326411|ref|ZP_03830435.1| hypothetical protein PcarcW_03479 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 258
Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 4/125 (3%)
Query: 74 NGTTIIPTIPAIRIEPSFQSYSRIFET-MRLYKSCKQHSMHCTIIISGGDPQKHGLAESI 132
G +IP I S S + + +H + +I +G D + G +E+
Sbjct: 37 AGHAVIPNIIGALNFASDAKLSVLISGGVGHSTDLLRHEIERNVITAGLDIETKGKSEAE 96
Query: 133 VYNNKL-LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG--KNIILVSSAYHLKRSQ 189
+ + + +++I +E S + NA S +I + K ILV +R+
Sbjct: 97 IIASLATRFFNIPQENIYIEGASTNCGVNATLSRKLIVDHGIEAKCAILVQDPLMQRRTY 156
Query: 190 LYFQH 194
F H
Sbjct: 157 ESFMH 161
>gi|296116471|ref|ZP_06835083.1| hypothetical protein GXY_11738 [Gluconacetobacter hansenii ATCC
23769]
gi|295976977|gb|EFG83743.1| hypothetical protein GXY_11738 [Gluconacetobacter hansenii ATCC
23769]
Length = 267
Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 53/141 (37%), Gaps = 25/141 (17%)
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQ-HSMHCTIIISGGDPQKHGL------- 128
+P + ++ + + I ET + +C+ +C ++ SGG L
Sbjct: 27 NDMPQADSASVDLVIHAGNAILETA--HAACEAAREANCHLLFSGGIGHSTTLLVETVRS 84
Query: 129 ------------AESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+E+ ++ E ++ + LET+S + +NA F+ ++ + +
Sbjct: 85 ENLLPEIYLKDRSEAEIFGTLASEVWSFPKEKLVLETRSTNCGENASFTKLLLSELGLEP 144
Query: 176 I--ILVSSAYHLKRSQLYFQH 194
IL R+ + FQ
Sbjct: 145 CSTILFQDPAMQLRTFVTFQK 165
>gi|330993951|ref|ZP_08317881.1| hypothetical protein SXCC_03846 [Gluconacetobacter sp. SXCC-1]
gi|329758897|gb|EGG75411.1| hypothetical protein SXCC_03846 [Gluconacetobacter sp. SXCC-1]
Length = 201
Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 36/174 (20%)
Query: 59 SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIII 118
P + IV L G RI E++RL + ++I
Sbjct: 22 PPVLPPRADGIVALTGG------------------QGRIEESVRLLVQGR----AGRLLI 59
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVER-----DDIKLETQSLDTFQNAQFSSSMIKNMQG 173
SG DP + L L +++ T NA +++ ++
Sbjct: 60 SGVDPH-------ATRGDFLRHLPPPVPLAAWTHTTLGSRATSTLGNADETAAWVREYGL 112
Query: 174 KNIILVSSAYHLKRSQLYFQHF--GINTKASCSDYLNAYYSIIPLSANFYLTEL 225
++I+V++ YH++R+ L G+ + P + + E
Sbjct: 113 HSLIVVTAGYHIRRAMLEISRTVPGVRLYGDPIRSPALAHPFHPATMRLMVVEY 166
>gi|322697228|gb|EFY89010.1| hypothetical protein MAC_04941 [Metarhizium acridum CQMa 102]
Length = 279
Score = 44.5 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 111 SMHCTIIISGGDPQKHG-LAESIVYNNKLLESG--------VERDDIKLETQSLDTFQNA 161
H + SG +K L+E+ Y N +++ V DI LE ++LD++ N
Sbjct: 90 RGHAVLAFSGAPTRKETTLSEAQSYANVAMQNAYFGLLDPPVMETDIILEERALDSYHNV 149
Query: 162 QFSSSMIKNMQ---GKNIILVSSAYHLKR 187
FS S+ + +++VS A+ R
Sbjct: 150 LFSLSLFYARFHCWPRRVVIVSHAFKRPR 178
>gi|17232735|ref|NP_489283.1| hypothetical protein alr5243 [Nostoc sp. PCC 7120]
gi|17134382|dbj|BAB76942.1| alr5243 [Nostoc sp. PCC 7120]
Length = 192
Score = 44.5 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 12/100 (12%), Positives = 35/100 (35%), Gaps = 7/100 (7%)
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF- 192
+G+ + + ++ DT N + +++ L++S H+ R++
Sbjct: 87 ARAIFQNAGIPNSRLHFDYRATDTVTNFTTLVGDFQKQHIQHLFLITSESHMPRAKAIAI 146
Query: 193 -----QHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ + S S+ P+ + + + L +
Sbjct: 147 LVLGSRGIAFTPVSVPSKATQP-ESMFPILRDIFRSLLWI 185
>gi|170717821|ref|YP_001784882.1| hypothetical protein HSM_1562 [Haemophilus somnus 2336]
gi|168825950|gb|ACA31321.1| protein of unknown function DUF218 [Haemophilus somnus 2336]
Length = 231
Score = 44.5 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 71/195 (36%), Gaps = 19/195 (9%)
Query: 20 IRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFS-YQRPLLSPQWKKDGNIIVLLGNGTTI 78
++++ +F+F II + ++Q Y + P ++LG
Sbjct: 18 VKRLLHYGFAFSIFTFFSLIIIDRCIAWYVQDRIYTKIEELPSRPYG----IVLGTAKYF 73
Query: 79 IPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKL 138
P + +R+ T+ L+K K +++SG D + E I L
Sbjct: 74 SKNNPNLYYN------NRLTATVELFKQEKIDY----LLLSG-DNRTMQYNEPITMFKDL 122
Query: 139 LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGIN 198
+ + D + ++ T + + + K + + +++ +H +R+ + + I+
Sbjct: 123 RKMDIPEDVMYMDFAGFRTLDSVIRADKVFKA---QPMTIITQQFHCERALFIAKFYDID 179
Query: 199 TKASCSDYLNAYYSI 213
+ Y S+
Sbjct: 180 AICFAAKSPANYLSV 194
>gi|150018811|ref|YP_001311065.1| hypothetical protein Cbei_3999 [Clostridium beijerinckii NCIMB
8052]
gi|149905276|gb|ABR36109.1| protein of unknown function DUF218 [Clostridium beijerinckii NCIMB
8052]
Length = 262
Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 51/121 (42%), Gaps = 22/121 (18%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQK-------------------HGLAESIVYNNK 137
I T++ + ++++ I+ISGG G E+ ++ +
Sbjct: 49 IPYTVQCDVNAWKNNICDKILISGGIGHSTQILRDEIRRSSEFNSIEVDGRPEADIFFDI 108
Query: 138 LLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQH 194
+ + GV D I +E +S++ NA+ + +++ + K++IL+ R+ F
Sbjct: 109 MTKIYGVNSDKIIIENKSMNCGDNAKKTIELLRKLNIEYKSLILIQDPTMQLRTFASFSK 168
Query: 195 F 195
+
Sbjct: 169 Y 169
>gi|148979911|ref|ZP_01815769.1| SanA protein [Vibrionales bacterium SWAT-3]
gi|145961515|gb|EDK26817.1| SanA protein [Vibrionales bacterium SWAT-3]
Length = 253
Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 9/137 (6%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + L+ K ++SG + E LL++GV + I L+
Sbjct: 88 RIEAAIELFDREKVDQ----FLLSGDNA-HRSYNEPWTMKRDLLKAGVPDERINLDYAGF 142
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK-ASCSDYLNAYYSII 214
T + + + N ++++ +H +R+ + I+ + + S + + I
Sbjct: 143 RTLDSIVRAKKIFD---TDNFLIITQKFHCERALFIANSYDIHAQCLAVSGPTHHSGTSI 199
Query: 215 PLSANFYLTELALKEYI 231
L F T+ L YI
Sbjct: 200 RLREVFARTKAFLDLYI 216
>gi|253990372|ref|YP_003041728.1| hypothetical protein PAU_02897 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781822|emb|CAQ84985.1| sana protein [Photorhabdus asymbiotica]
Length = 258
Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 35/229 (15%), Positives = 71/229 (31%), Gaps = 34/229 (14%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILL--KHLQFSYQRPLLSPQWKKD 65
I+ + R I + L G I+ I+L + + +
Sbjct: 3 SIIDVYKGKSMWKRLI------IGLLFITGMLILTAIVLDRWISWKTAPYIFDDLKQLPE 56
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ ++LG + P RI + Y S K +++SG + Q
Sbjct: 57 REVGMVLGTSKYYLSGAPNQYYM------YRIQGAVNAYNSDKIKY----LLLSGDNAQ- 105
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
E I L+ +G+ +I L+ T + + + + +++ +H
Sbjct: 106 QSYNEPITMRRDLVRAGIPATNIVLDFAGFRTLDSIVRTRKVFD---TNDFTIITQRFHC 162
Query: 186 KRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
+R+ H GI + ++ L+E I L
Sbjct: 163 ERALFIAMHMGITAQCYAVSTPKNMITVR------------LREIIARL 199
>gi|284053952|ref|ZP_06384162.1| hypothetical protein AplaP_21104 [Arthrospira platensis str.
Paraca]
gi|291568560|dbj|BAI90832.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 246
Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 60/177 (33%), Gaps = 42/177 (23%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ ++ + +C ++LF +G + LL ++ ++ + ++LG
Sbjct: 16 RRRVKILLIAACALMLFMSLG---LVNHLL----------IMRSSAREPVDTFLVLGG-- 60
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
S R +L IIIS G ++
Sbjct: 61 ----------------SIRREIYVSQLATEY----PQIPIIISKG-------SDDPCIVK 93
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ + LE + TF N FS ++ +++ +++S HL R+Q +
Sbjct: 94 LFERNKAPSQGVWLEKCANSTFGNYMFSQPLLTQWGARHVKILTSDTHLTRAQWMAK 150
>gi|251792634|ref|YP_003007360.1| PurR protein [Aggregatibacter aphrophilus NJ8700]
gi|247534027|gb|ACS97273.1| PurR protein [Aggregatibacter aphrophilus NJ8700]
Length = 237
Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 81/216 (37%), Gaps = 23/216 (10%)
Query: 14 HLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL--SPQWKKDGNIIVL 71
L Q R + +++ F+ F+F+ I+L Y R + + + ++
Sbjct: 13 FTLLQIKRAVRYLAIFVAFFAFL------LIILDQTIGYYVRKDIYYDIEKIPNRPYGLV 66
Query: 72 LGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAES 131
LG + + Y+R+ RL+++ K +++SG D + E
Sbjct: 67 LG------TSKYFANNTLNLFYYNRLLAAQRLFEAKKVDY----LLLSG-DNRTLQYNEP 115
Query: 132 IVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
L + GV ++ I L+ T + + + K ++ ++S +H +R+
Sbjct: 116 RTMLKDLKKMGVPQEFIYLDFAGFRTLDSVIRADQVFKAH---SLTIISQKFHCERALFI 172
Query: 192 FQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+ +DY YS + + F +
Sbjct: 173 AKFHNIDAICFVADYPQ-VYSFVRVREFFARLQAVW 207
>gi|307130323|ref|YP_003882339.1| Protein ydcF [Dickeya dadantii 3937]
gi|306527852|gb|ADM97782.1| Protein ydcF [Dickeya dadantii 3937]
Length = 256
Score = 44.1 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 41/105 (39%), Gaps = 22/105 (20%)
Query: 110 HSMHCTIIISGGDPQKH-------------------GLAESIVYNNKLLE-SGVERDDIK 149
+ +++SGG G +E+ + + + G+ D++
Sbjct: 53 KNADIPVLLSGGIGHSTVLLQQAVKNNRLTAAIDSAGKSEAEILSRIAISVFGIAADNLF 112
Query: 150 LETQSLDTFQNAQFSSSMIKNMQGKN--IILVSSAYHLKRSQLYF 192
+E+ S + +NA FS ++ + + IILV +R+ F
Sbjct: 113 IESASRNCGENADFSRELVLDKKIARQEIILVQDPLMQRRTTETF 157
>gi|326435470|gb|EGD81040.1| hypothetical protein PTSG_10982 [Salpingoeca sp. ATCC 50818]
Length = 219
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 14/126 (11%)
Query: 66 GNIIVLLGNGTTI-------IPTIPAIRIEPSFQSYSRIFETMRLYKS--CKQHSMHCTI 116
V+L G + P + I FQ+ + ++ T+
Sbjct: 5 AAAAVVLCPGHGVYIGERGCDPALGVNWIIAPFQAGEGAAFVQHVKRAVELAHEDPTATL 64
Query: 117 IISGGDPQKH-GLAESIVYNNKLLESGVE----RDDIKLETQSLDTFQNAQFSSSMIKNM 171
+ SGG + +E+ Y GV R+ LE + D+ +N +++++I+
Sbjct: 65 VFSGGATKAETPTSEAQSYLTLAEHLGVLDAALRERTLLEEYARDSLENLAYTAALIQER 124
Query: 172 QGKNII 177
G +
Sbjct: 125 AGPTPV 130
>gi|269219323|ref|ZP_06163177.1| conserved hypothetical protein [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269211470|gb|EEZ77810.1| conserved hypothetical protein [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 125
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+++ GG + E+ V + G I+L+ +S T QN + + +I++ +
Sbjct: 2 LVLCGGAVSG-PVPEAEVMESYARARGY-EGPIRLDRESRSTLQNIENAIPLIEDA--AS 57
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKAS 202
+ +VS++ H + ++ + G+ +
Sbjct: 58 VAIVSNSVHALKGRILLR--GLRPDLA 82
>gi|326435469|gb|EGD81039.1| hypothetical protein, variant [Salpingoeca sp. ATCC 50818]
Length = 194
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 14/126 (11%)
Query: 66 GNIIVLLGNGTTI-------IPTIPAIRIEPSFQSYSRIFETMRLYKS--CKQHSMHCTI 116
V+L G + P + I FQ+ + ++ T+
Sbjct: 5 AAAAVVLCPGHGVYIGERGCDPALGVNWIIAPFQAGEGAAFVQHVKRAVELAHEDPTATL 64
Query: 117 IISGGDPQKH-GLAESIVYNNKLLESGVE----RDDIKLETQSLDTFQNAQFSSSMIKNM 171
+ SGG + +E+ Y GV R+ LE + D+ +N +++++I+
Sbjct: 65 VFSGGATKAETPTSEAQSYLTLAEHLGVLDAALRERTLLEEYARDSLENLAYTAALIQER 124
Query: 172 QGKNII 177
G +
Sbjct: 125 AGPTPV 130
>gi|305665201|ref|YP_003861488.1| putative transport-related membrane protein [Maribacter sp.
HTCC2170]
gi|88709954|gb|EAR02186.1| putative transport-related membrane protein [Maribacter sp.
HTCC2170]
Length = 217
Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 51/139 (36%), Gaps = 8/139 (5%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + +P+ +RI T+ L+ S K +++SG + + E
Sbjct: 54 GLVLGTSKKIATGQPNPYYSNRIKATVELFMSNKIDF----VLVSGDNGSIY-YNEPTTI 108
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L+ G+ + I L+ T + ++ + ++ ++S +H +R+
Sbjct: 109 KKDLVAKGIPEEKIFLDYAGFRTLDSMVRANVV---FGLDSVTVISQKFHNERAIYIANK 165
Query: 195 FGINTKASCSDYLNAYYSI 213
G+N + +
Sbjct: 166 KGLNAIGYNAQDIKGQQGF 184
>gi|317033599|ref|XP_001395185.2| hypothetical protein ANI_1_1366104 [Aspergillus niger CBS 513.88]
Length = 275
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 59/174 (33%), Gaps = 33/174 (18%)
Query: 43 TILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM- 101
+L + L P D +I + PA + + ++ +T+
Sbjct: 12 NLLAQFLAHEQIPASSHPPINTDCIVICV------SAVLYPATTVFKHLERNPQLTKTLV 65
Query: 102 ----------RLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDI--- 148
LY++ +H + +I P+ G ES V + + I
Sbjct: 66 LCGGIGHSTPYLYEAVSKHPDYAHLI-----PEITGKPESHVLHTIFTR-CFDATFIQKS 119
Query: 149 ----KLETQSLDTFQNAQFSSSMIKNMQ---GKNIILVSSAYHLKRSQLYFQHF 195
LE +S + QNA + +++ K++I+V +R+ F+
Sbjct: 120 GCTVLLEDKSTNCGQNATETRALLARNGIPEPKSMIVVQDPTMARRTVASFEKA 173
>gi|146329558|ref|YP_001208972.1| hypothetical protein DNO_0035 [Dichelobacter nodosus VCS1703A]
gi|146233028|gb|ABQ14006.1| conserved hypothetical membrane protein [Dichelobacter nodosus
VCS1703A]
Length = 223
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 8/99 (8%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
+RI +LY + K I+SG +P ++ E LL +G+ I+ +
Sbjct: 75 ARIEAAAQLYHAGKARY----FIVSGANPSRY-YNEPEQMRLDLLAAGIPPAHIQADYAG 129
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
T + + +N + +++S +H R+ +
Sbjct: 130 FRTLDSILRMKKVFQN---QRYLIISQPFHNARAVFIAR 165
>gi|134079894|emb|CAK41026.1| unnamed protein product [Aspergillus niger]
Length = 282
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 24/182 (13%)
Query: 31 LLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
L+++ + + + L+ Q P S + + IV+ + T +E +
Sbjct: 6 LVWTKVNNNQLASCLVAQFLAHEQIPA-SSHPPINTDCIVICVSAVLYPATTVFKHLERN 64
Query: 91 FQSYSRIF-------ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGV 143
Q + T LY++ +H + +I P+ G ES V +
Sbjct: 65 PQLTKTLVLCGGIGHSTPYLYEAVSKHPDYAHLI-----PEITGKPESHVLHTIFTR-CF 118
Query: 144 ERDDI-------KLETQSLDTFQNAQFSSSMIKNMQ---GKNIILVSSAYHLKRSQLYFQ 193
+ I LE +S + QNA + +++ K++I+V +R+ F+
Sbjct: 119 DATFIQKSGCTVLLEDKSTNCGQNATETRALLARNGIPEPKSMIVVQDPTMARRTVASFE 178
Query: 194 HF 195
Sbjct: 179 KA 180
>gi|192359918|ref|YP_001982580.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Cellvibrio japonicus Ueda107]
gi|190686083|gb|ACE83761.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Cellvibrio japonicus Ueda107]
Length = 470
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
++ E G+ I LE +T ++ + ++ +LV SA H+ R FQ
Sbjct: 66 AEQMQELGIADAKIILEPVGRNTAPALALAAMYAQEVEQSPTLLVLSADHMIRDVAAFQT 125
Query: 195 F-GINTKASCSDYLNAY 210
+ +AS + +L +
Sbjct: 126 AVDVAVRASRAGHLVTF 142
>gi|284007104|emb|CBA72379.1| transport protein [Arsenophonus nasoniae]
Length = 232
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 40/110 (36%), Gaps = 8/110 (7%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K +++SG + + E I L+ +G+ I L+
Sbjct: 70 RIQGAINAYNSGKIKY----LLVSGDNAHYN-YNEPITMRRDLIAAGIPAAKIVLDFAGF 124
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
T + + + N +++ +H +R+ GI+ +
Sbjct: 125 RTLDSVIRTRQVFA---TNNFTIITQRFHCERALFIAMKKGIDAQCYAVS 171
>gi|262340843|ref|YP_003283698.1| hypothetical protein BLBBGE_055 [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272180|gb|ACY40088.1| hypothetical protein BLBBGE_055 [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 198
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 52/143 (36%), Gaps = 20/143 (13%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI L+ K II+SG D ++ E + +L++ G+ I + +
Sbjct: 66 RIDAACSLFHHKKIRY----IIVSG-DNREKNYNEPKMMKKELIKKGIPSHFIYEDLYGI 120
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIP 215
+T + + K ++S +H +R+ G++ + L
Sbjct: 121 NTLHSVLRVYKIFNQ---KKFTIISQKFHNERAIFIGNCLGLDVIGFNAKNLT------- 170
Query: 216 LSANFYLTELALKEYIGILIAYY 238
+ +++ L+E + A +
Sbjct: 171 -----FDSKIQLREVFARVKALW 188
>gi|85107837|ref|XP_962459.1| hypothetical protein NCU07943 [Neurospora crassa OR74A]
gi|28924065|gb|EAA33223.1| predicted protein [Neurospora crassa OR74A]
Length = 267
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 24/61 (39%)
Query: 144 ERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
I +E +S NA + +++ + I+++ ++R+ F ++
Sbjct: 117 AAPRILIEDRSTTCATNASEARKLLEASAPRTIVVIQDPTMVRRTVACFDRVYMDMAQPP 176
Query: 204 S 204
+
Sbjct: 177 T 177
>gi|169607004|ref|XP_001796922.1| hypothetical protein SNOG_06554 [Phaeosphaeria nodorum SN15]
gi|111065265|gb|EAT86385.1| hypothetical protein SNOG_06554 [Phaeosphaeria nodorum SN15]
Length = 336
Score = 43.3 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 18/90 (20%)
Query: 116 IIISGGD-PQKHGLAESIVYNNKLLESG--------------VERDDIKLETQSLDTFQN 160
++ SGG + ++E+ Y + LL S R I LE + D+ QN
Sbjct: 149 LVFSGGRTKKGTDMSEARSYYHALLASELQQNHLGGGKTHALFARGRILLEEHATDSLQN 208
Query: 161 AQFSSSMIKNMQG---KNIILVSSAYHLKR 187
FS + + G + I +V+ A+ +R
Sbjct: 209 LLFSILLFRRTTGGYPRQIRVVTHAFKARR 238
>gi|152967541|ref|YP_001363325.1| hypothetical protein Krad_3598 [Kineococcus radiotolerans SRS30216]
gi|151362058|gb|ABS05061.1| protein of unknown function DUF218 [Kineococcus radiotolerans
SRS30216]
Length = 223
Score = 43.3 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 18/119 (15%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+++++LG+ + T+ ++ R +R S ++ SG P +
Sbjct: 51 DVVLVLGHPSRRDGTLHPVQRW-------RTEIAVR-------SSSSALLVFSGYAPAR- 95
Query: 127 GLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
G +E+ V GV ++ E + T+ N F+ + G I + SS H
Sbjct: 96 GRSEAAVMAEHARRVLGVAPGRLRREEAATSTWDNIAFTLDDLAA--GSRIAIASSPVH 152
>gi|260582931|ref|ZP_05850715.1| SanA protein [Haemophilus influenzae NT127]
gi|260094031|gb|EEW77935.1| SanA protein [Haemophilus influenzae NT127]
Length = 244
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 67/193 (34%), Gaps = 15/193 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGN 67
+ + +L + F LL++ I+ ++ + + F + + +
Sbjct: 17 FIMFTAMLVKKFSPKFTALFRALLYAIFALIILCLLVDRGVSFYVRDKIFTNIDELPFRP 76
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
++LG + P + + SR+ L + K + +++SG D +
Sbjct: 77 YALVLGTSKYTVSGKPNVYYD------SRLTAAKNLIEQQKVNY----LLLSG-DNRTLQ 125
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E L + GV + + T + + + + K +VS +H +R
Sbjct: 126 YNEPRAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQ---VKTFTIVSQKFHCER 182
Query: 188 SQLYFQHFGINTK 200
+ L Q I+
Sbjct: 183 ALLIAQAHNIDAI 195
>gi|46109006|ref|XP_381561.1| hypothetical protein FG01385.1 [Gibberella zeae PH-1]
Length = 321
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 25/184 (13%)
Query: 42 PTILLKHLQFSYQRPLLSPQWKKDGNIIVLL--GNGTTIIPTIPAIRIEPSFQSYSRIFE 99
P+ +L + + + + G I+++L G G + AI P YSRI +
Sbjct: 63 PSAVLFTTETVFSMVNELIETTQSGPIVLVLCGGIGHSTQLMHDAIARHP---RYSRISD 119
Query: 100 TMRLYKSCKQHSMHC----TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
+R+ + + + + GG + +L I +E S
Sbjct: 120 RIRMLPEARMLEVIAEQFWQLRVDGGS----QASMGTATRERLT--------ILVEDTST 167
Query: 156 DTFQNAQFSSSMIKNMQ---GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYS 212
+ NA + ++ +I++ +R+ F+ KA + L ++ +
Sbjct: 168 NCALNAVNTRKVLDANGYTSPHSIVVAQDPTMCRRTVAAFEQV-YANKADETPVLRSWPT 226
Query: 213 IIPL 216
+P
Sbjct: 227 FVPK 230
>gi|332708432|ref|ZP_08428409.1| hypothetical protein LYNGBM3L_19350 [Lyngbya majuscula 3L]
gi|332352835|gb|EGJ32398.1| hypothetical protein LYNGBM3L_19350 [Lyngbya majuscula 3L]
Length = 195
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY--- 191
+ G+ I + DT N + + ++I LV+S YH+ RS+
Sbjct: 83 RQIFRKVGISDQRIHYDFCPTDTVTNFTCTVNYFYRQDIQHIYLVTSDYHMVRSRAIATF 142
Query: 192 -FQHFGINTKAS 202
F GI
Sbjct: 143 VFGSRGITFTPV 154
>gi|68250208|ref|YP_249320.1| SanA [Haemophilus influenzae 86-028NP]
gi|68058407|gb|AAX88660.1| SanA [Haemophilus influenzae 86-028NP]
Length = 244
Score = 42.9 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 69/193 (35%), Gaps = 15/193 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGN 67
+ + +L + + F + LL++ I+ ++ + + F + + +
Sbjct: 17 FIMFTAMLVKKLSPKFTVLFRALLYAIFALIILCLLVDRGVSFYVRDKIFTNIDELPFRP 76
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
++LG + P + + SR+ L + K + +++SG D +
Sbjct: 77 CALVLGTSKYTVSGKPNVYYD------SRLMAAKSLIEQQKVNY----LLLSG-DNRTLQ 125
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E L + GV + + T + + + + K +VS +H +R
Sbjct: 126 YNEPRAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQ---VKTFTIVSQKFHCER 182
Query: 188 SQLYFQHFGINTK 200
+ L Q I+
Sbjct: 183 ALLIAQAHNIDAI 195
>gi|301060077|ref|ZP_07200950.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300445840|gb|EFK09732.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 271
Score = 42.5 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 67/225 (29%), Gaps = 62/225 (27%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R F++L I I T+ +Y K +++VL
Sbjct: 9 RPKLVKVFFVVLIIGI---FIGTLFCAPHYLAYS------DRAKKADVVVLFVG------ 53
Query: 81 TIPAIRIEPSFQSYSR-----IFETMRLYKSCKQHSMHCTIII--SGGDPQKHGLAESIV 133
P F++ + I E + Y H +I +GG + +E
Sbjct: 54 --------PDFEARKKGTHLLINEGIADYLLIPAHRRVSKVIADDNGGIARNEIPSEMDG 105
Query: 134 YNNK-----------LLESGVERDDIKLETQSL-----------------DTFQNAQFSS 165
Y ++ +++ +ET+ L DT +
Sbjct: 106 YFQDGWVNPFEKDYSMVRMKGQKERKDVETKVLKIKHSHPKLFGNRANLEDTHSEVLRAK 165
Query: 166 SMIKNMQGKNIILVSSAYHLKR----SQLYFQHFGINTKASCSDY 206
M+ K+ I VSS YH++R + F + + Y
Sbjct: 166 EMMDAYGLKSAIFVSSPYHMRRIKIIAAKVFGQKNYDLSFVPTPY 210
>gi|296116632|ref|ZP_06835242.1| hypothetical protein GXY_12533 [Gluconacetobacter hansenii ATCC
23769]
gi|295976844|gb|EFG83612.1| hypothetical protein GXY_12533 [Gluconacetobacter hansenii ATCC
23769]
Length = 227
Score = 42.5 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 23/51 (45%)
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASC 203
Q+ T NA ++ ++ ++I+V++ YH++R+ +
Sbjct: 117 QATSTLGNADETAQWVRAQDIHSLIVVTAGYHIRRAMMEIARAAPGVTLYP 167
>gi|291571986|dbj|BAI94258.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 188
Score = 42.5 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 66/184 (35%), Gaps = 24/184 (13%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++ + A + + S F+ + + + + ++ G+P
Sbjct: 2 ADYIIV-------TEGLTATEATAAVDNLSPYFKAVICQLAA-DAEPNSRVFVAPGNPFG 53
Query: 126 HGLAESIVYNNKL------LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNI 176
H +E L L+ V ++ + LDTF NA+ +K + +++
Sbjct: 54 HSQSEEDYAGEFLQQLRPDLQVLVPQN--VRDKTYLDTFDNARVLRYWLKQEKYWHLESV 111
Query: 177 ILVSSAYHLKRSQLYFQHFGI---NTKASCSDYLNAYYSIIPLSANF-YLTELALKEYIG 232
IL + H RS++ F+ + ++ +I P + Y L E +
Sbjct: 112 ILYCNKPHSFRSRIMFKSCDFPVQKVVGCRPEKVDNSMAIAPRLWFYNYPPIQFLYE-LA 170
Query: 233 ILIA 236
L+
Sbjct: 171 TLVY 174
>gi|294623291|ref|ZP_06702156.1| hypothetical protein EfmU0317_2556 [Enterococcus faecium U0317]
gi|291597319|gb|EFF28505.1| hypothetical protein EfmU0317_2556 [Enterococcus faecium U0317]
Length = 144
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 121 GDPQKHGLAESIVYNNKLLE-SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG 173
G + G++ES + L E + +E++S ++ +NA FS ++ ++
Sbjct: 82 GFHFEDGMSESEICRQYLKEVYDLPDKAFLIESKSTNSGENATFSLEILHSLGA 135
>gi|284052533|ref|ZP_06382743.1| hypothetical protein AplaP_13778 [Arthrospira platensis str.
Paraca]
Length = 188
Score = 42.5 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 66/184 (35%), Gaps = 24/184 (13%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++ + A + + S F+ + + + + ++ G+P
Sbjct: 2 ADYIIV-------TEGLTATEATAAVDNLSPYFKAVICQLAA-DAEPNSRVFVAPGNPFG 53
Query: 126 HGLAESIVYNNKL------LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNI 176
H +E L L+ V ++ + LDTF NA+ +K + +++
Sbjct: 54 HSQSEEDYAGEFLQQLRPDLQVLVPQN--VRDKTYLDTFDNARVLRYWLKQEKYWPLESV 111
Query: 177 ILVSSAYHLKRSQLYFQHFGI---NTKASCSDYLNAYYSIIPLSANF-YLTELALKEYIG 232
IL + H RS++ F+ + ++ +I P + Y L E +
Sbjct: 112 ILYCNKPHSFRSRIMFKSCDFPVQKVVGCRPEKVDNSMAIAPRLWFYNYPPIQFLYE-LA 170
Query: 233 ILIA 236
L+
Sbjct: 171 TLVY 174
>gi|167855131|ref|ZP_02477903.1| SanA protein [Haemophilus parasuis 29755]
gi|167853766|gb|EDS25008.1| SanA protein [Haemophilus parasuis 29755]
Length = 235
Score = 42.5 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 26/207 (12%), Positives = 73/207 (35%), Gaps = 15/207 (7%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R ++ +L F + ++ I + + + ++LG
Sbjct: 22 RLSIWLVKGILGLCFPLFLLMFAIDFATGYWVRDQIYTDVRQLPQREYALVLGTAKYYPS 81
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
P + + R+ +++ K + +++SG + + E + L +
Sbjct: 82 GSPNLYYK------YRLDAAKAVFEHNKVNY----LLVSGDNKTAY-YNEPKMMTRDLRQ 130
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ I+ + +T + + + + I++S +H +R+ + I
Sbjct: 131 MGIPWQRIRQDYAGYNTLDSIIRADKVFQ---LHPFIIISQQFHCERALFIAKFHQIEAV 187
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELAL 227
+ Y +A+Y + + F + +A+
Sbjct: 188 CFAAKYPDAHYKVR-IREFFARSAMAV 213
>gi|238920724|ref|YP_002934239.1| protein YdcF [Edwardsiella ictaluri 93-146]
gi|238870293|gb|ACR70004.1| protein YdcF [Edwardsiella ictaluri 93-146]
Length = 258
Score = 42.5 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGINTKAS 202
I LE+ S + +NA+F+ ++++ ++LV +R+ F +
Sbjct: 110 PSQIWLESASTNCGENARFARALLQEKGATPSRLLLVQDPLMQRRTLATFLRV---WQDR 166
Query: 203 CSDYLNAYYSIIPL 216
+ ++ + +P
Sbjct: 167 PTVQFASWPTFVPR 180
>gi|171915393|ref|ZP_02930863.1| predicted thioredoxin-like protein [Verrucomicrobium spinosum DSM
4136]
Length = 263
Score = 42.2 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 7/119 (5%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
E ++ ++ + +++SG DP + G E + L+ GV D + + T
Sbjct: 102 VERVKSAQALLEAGKVQFLLVSG-DPDRDGCNEPLAMKAALVAGGVPADRVYCDFGGGRT 160
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKAS---CSDYLNAYYSI 213
+ + + +++ +VS H +R+ + G+ + +D L + +
Sbjct: 161 LDSVVRARKV---FGQRDMTIVSHGLHNERALYMARRRGLPDSVALNTPTDNLAPGWKV 216
>gi|72391590|ref|XP_846089.1| hypothetical protein [Trypanosoma brucei TREU927]
gi|62175655|gb|AAX69787.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70802625|gb|AAZ12530.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 309
Score = 42.2 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 55/184 (29%), Gaps = 36/184 (19%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
+ + + +L+FS + +L +P++ +I++
Sbjct: 4 RFRNKRRTWPLIAIVFIVLMFSLLR---AKLLLQADTPGGAAEREANPKYLSTDTLIIVP 60
Query: 73 GNGTTIIPTIP---------------AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
G+G P + S I + + + S+ +I
Sbjct: 61 GHGVLNAPNASEWKNESEWCLEPHQLRAGVVLPLCFASHIRRGLEILRDQINTSI---LI 117
Query: 118 ISGGD--PQKHGLAESIVY-------------NNKLLESGVERDDIKLETQSLDTFQNAQ 162
SGG +E++ Y + + + I E + D+++N
Sbjct: 118 FSGGQTCGIAGPRSEALGYYIVAKESKLFGIFEPEYVAKDIMNGRIFTEEFARDSYENLL 177
Query: 163 FSSS 166
FS +
Sbjct: 178 FSIA 181
>gi|145242166|ref|XP_001393729.1| hypothetical protein ANI_1_514084 [Aspergillus niger CBS 513.88]
gi|134078274|emb|CAK96855.1| unnamed protein product [Aspergillus niger]
Length = 259
Score = 42.2 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 13/123 (10%)
Query: 112 MHCTIIISGG--DPQKHGLAESIVYNNKL-------LESGVERDDIKLETQSLDTFQNAQ 162
++ SGG + LAE + Y N + + ET + D++QN
Sbjct: 60 PDALLVFSGGPTKKGRTDLAEGVSYLNLAKDNNYFGFAPQINPTRVVAETHATDSYQNVL 119
Query: 163 FSS---SMIKNMQGKNIILVSSAYHLKRSQLY-FQHFGINTKASCSDYLNAYYSIIPLSA 218
FS + + K + +V+ + +R Y F G++ AS +N + PL++
Sbjct: 120 FSMLQFRLRTGVYPKRVTVVTHEFKRRRFVEYHFPALGLSDSASTVVGINPPEEVTPLAS 179
Query: 219 NFY 221
Sbjct: 180 LLA 182
>gi|50543214|ref|XP_499773.1| YALI0A05115p [Yarrowia lipolytica]
gi|49645638|emb|CAG83698.1| YALI0A05115p [Yarrowia lipolytica]
Length = 294
Score = 42.2 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 13/114 (11%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQK--HGLAESIVYNNKLLESGVERDDIKLETQS 154
I E +R ++ SGG +K ++E Y G++ +E +
Sbjct: 115 ITEGVR----RASEDPSALLLFSGGQTKKAAGPISEGTSYYQLAEALGLDMSQTAVEEYA 170
Query: 155 LDTFQNAQFSSSMIKNMQGK---NIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
D+++N FS + + + G+ I +V Y KR++ F+ SD
Sbjct: 171 RDSYENLAFSIARFRELTGRYPVRITVV--GYEFKRAR--FEQLHRPAVGYDSD 220
>gi|291458558|ref|ZP_06597948.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078
str. F0262]
gi|291419091|gb|EFE92810.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078
str. F0262]
Length = 367
Score = 42.2 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 55/175 (31%), Gaps = 17/175 (9%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
LL+ + + W + + F+ F+ + + L P P+
Sbjct: 37 LLNLLTALFWRWEKRQREKNRERGKRVFVF---FMTSYALSFVSFLLLSLLLLLPRKKPE 93
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ ++++G + S R+ + S I+SGG
Sbjct: 94 --AGLDYVIVMG--------TYLSHNKASDTLKDRLEKAA----DYAGSSPGTVFILSGG 139
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNI 176
+ ++ V +++ GV + +E S + +S I + + +
Sbjct: 140 RGKFGTSTQASVMYYYMIKRGVPASKLLMEFYSSSLQEKIGYSVQTILSNESERA 194
>gi|119488940|ref|XP_001262812.1| hypothetical protein NFIA_114480 [Neosartorya fischeri NRRL 181]
gi|119410970|gb|EAW20915.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 266
Score = 42.2 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 38/101 (37%), Gaps = 10/101 (9%)
Query: 123 PQKHGLAESIVYNNKLLESGVERD-----DIKLETQSLDTFQNAQFSSSMIKNMQ--GKN 175
P+ GL E+ V + + +E +S + NA + +++ ++
Sbjct: 90 PEIDGLPEAQVLHRVFTRCFDAPKILSSCRVLIEDRSTNCGANAIETKRLLEENGIRPES 149
Query: 176 IILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
+++V +R+ F+ + + ++ + +P
Sbjct: 150 MLIVQDPTMSRRTVASFEKA---FSEAGTLRFTSWPTFVPK 187
>gi|255938291|ref|XP_002559916.1| Pc13g15200 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584536|emb|CAP92589.1| Pc13g15200 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 282
Score = 42.2 bits (98), Expect = 0.073, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 42/107 (39%), Gaps = 20/107 (18%)
Query: 113 HCTIIISGG--DPQKHGLAESIVYNNKLLESG----------VERDDIKLETQSLDTFQN 160
H ++ SGG + L+E Y N ++ ++ + ET + D++QN
Sbjct: 66 HSLLVFSGGPTKKPRTELSEGQSYLNLARDNDYFQDTPTISTIDPSRVIAETNATDSYQN 125
Query: 161 AQFSS---SMIKNMQGKNIILVSSAYHLKRSQLY---FQHFGINTKA 201
FS + + + + +V+ + KR++ F G+
Sbjct: 126 LLFSLIKFRVYTGVYPERVTVVTHEF--KRARFMQCHFPAVGLVPLG 170
>gi|300716338|ref|YP_003741141.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
gi|299062174|emb|CAX59290.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
Length = 257
Score = 41.8 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 22/108 (20%)
Query: 110 HSMHCTIIISGGDPQKHGLAESIVYNN---------------KLLESGV-----ERDDIK 149
+++SGG+ L + + + L + + +
Sbjct: 53 RQRGIPLLLSGGEGHSTELLRAALAADGRYQQFATLPGGEGDLLQAMAIQAFGLPPEQVL 112
Query: 150 LETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHF 195
E +S + +NA FS + ++ +LV +R++ + H
Sbjct: 113 NENRSRNCGENALFSLNFLQKAGKVPAKYLLVQDPLMQRRTKATYLHQ 160
>gi|256377580|ref|YP_003101240.1| hypothetical protein Amir_3500 [Actinosynnema mirum DSM 43827]
gi|255921883|gb|ACU37394.1| hypothetical protein Amir_3500 [Actinosynnema mirum DSM 43827]
Length = 134
Score = 41.8 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
G E+ + G R + E S T++N + +++ I LVS
Sbjct: 18 GGAVGGTRPEADLLAEHARALGY-RGPLLREAGSRTTWENVREVGPLLE--GFARIRLVS 74
Query: 181 SAYHLKRSQLY 191
+ +H ++++ Y
Sbjct: 75 NPFHAEKAREY 85
>gi|219870725|ref|YP_002475100.1| SanA protein, membrane protein [Haemophilus parasuis SH0165]
gi|219690929|gb|ACL32152.1| SanA protein, membrane protein [Haemophilus parasuis SH0165]
Length = 235
Score = 41.8 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 25/212 (11%), Positives = 78/212 (36%), Gaps = 16/212 (7%)
Query: 17 CQSIRKI-FFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNG 75
+ + ++ ++ +L F + ++ I + + + + ++LG
Sbjct: 17 RRWVARVSIWLMKGILGLCFPLFLLMFAIDFATGYWVRDQIYIDVRQLPQREYALVLGTA 76
Query: 76 TTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYN 135
P + + R+ +++ K + +++SG + + E +
Sbjct: 77 KYYPSGSPNLYYK------YRLDAAKAVFEHNKVNY----LLVSGDNKTAY-YNEPKMMT 125
Query: 136 NKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHF 195
L + G+ I+ + +T + + + + + I++S +H +R+ +
Sbjct: 126 RDLRQMGIPWQRIRQDYAGYNTLDSIIRADKVFQ---LQPFIIISQQFHCERALFIAKFH 182
Query: 196 GINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
I + Y +A+Y + + F + +A+
Sbjct: 183 QIEAVCFAAKYPDAHYKVR-IREFFARSAMAV 213
>gi|209528176|ref|ZP_03276647.1| hypothetical protein AmaxDRAFT_5473 [Arthrospira maxima CS-328]
gi|209491385|gb|EDZ91769.1| hypothetical protein AmaxDRAFT_5473 [Arthrospira maxima CS-328]
Length = 188
Score = 41.8 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 24/184 (13%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
+ I++ + A + + S F+ + + + + ++ G+P
Sbjct: 2 ADYIIV-------TEGLTATEATAAVDNLSPYFKAVICQLAA-DAEPNSRVFVAPGNPFG 53
Query: 126 HGLAESIVYNNKL------LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG---KNI 176
H +E L L+ V ++ + LDTF NA+ +K + ++
Sbjct: 54 HSQSEEDYAGEFLQQLRPDLQVLVPQN--VRDKTYLDTFDNARVLRYWLKQEKYWPLYSV 111
Query: 177 ILVSSAYHLKRSQLYFQHFGI---NTKASCSDYLNAYYSIIPLSANF-YLTELALKEYIG 232
IL + H RS++ F+ + ++ +I P + Y L E +
Sbjct: 112 ILYCNKPHSFRSRIMFKSCDFPVQKVVGCRPEKVDNSMAIAPRLWFYNYPPIQFLYE-LA 170
Query: 233 ILIA 236
L+
Sbjct: 171 TLVY 174
>gi|207111747|ref|ZP_03245909.1| hypothetical protein HpylH_21987 [Helicobacter pylori
HPKX_438_CA4C1]
Length = 39
Score = 41.8 bits (97), Expect = 0.094, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAY 183
+ I+ E QS+ T +N FS I + + +V++ +
Sbjct: 1 ENRIRKEDQSVSTRENLSFSRRFIDPKH-ETVGIVTNNF 38
>gi|14250902|emb|CAC39256.1| hypothetical protein [Trypanosoma brucei]
Length = 309
Score = 41.8 bits (97), Expect = 0.096, Method: Composition-based stats.
Identities = 23/184 (12%), Positives = 55/184 (29%), Gaps = 36/184 (19%)
Query: 13 WHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLL 72
+ + + +L+FS + +L +P++ +I++
Sbjct: 4 RFRNKRRTWPLIAIVFIVLMFSLLR---AKLLLQADTPGGAAEREANPKYLSTDTLIIVP 60
Query: 73 GNGTTIIPTIP---------------AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
G+G P + S + + + + S+ +I
Sbjct: 61 GHGVLNAPNASEWKNESEWCLEPHQLRAGVVLPLCFASHVRRGLEILRDQINTSI---LI 117
Query: 118 ISGGD--PQKHGLAESIVY-------------NNKLLESGVERDDIKLETQSLDTFQNAQ 162
SGG +E++ Y + + + I E + D+++N
Sbjct: 118 FSGGQTCGIAGPRSEALGYYIVAKESKLFGIFEPEYVAKDIMNGRIFTEEFARDSYENLL 177
Query: 163 FSSS 166
FS +
Sbjct: 178 FSIA 181
>gi|118469130|ref|YP_890171.1| hypothetical protein MSMEG_5945 [Mycobacterium smegmatis str. MC2
155]
gi|118170417|gb|ABK71313.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
155]
Length = 192
Score = 41.4 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 19/179 (10%), Positives = 46/179 (25%), Gaps = 41/179 (22%)
Query: 17 CQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGT 76
+ R C +L + + + Y P + P + + +++LG
Sbjct: 14 RRRFRNGMLAFCLILTAALVAGLPV-----------YVFPQVDPP--RHADAVLILGG-- 58
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
P R R T+++S +
Sbjct: 59 ------PDYRRYGFGFDLGR-------------EGWAQTVVVSNPNGADDPF-----MTE 94
Query: 137 KLLESGVERDDIKLE-TQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
E + T + + + + +I+V+ H+ R++ +
Sbjct: 95 YCAEPH-PEFHLICFIPDPRTTKGEGRELRRLAEENGWQRVIVVTIRPHISRARYILEQ 152
>gi|330718496|ref|ZP_08313096.1| hypothetical protein LfalK3_03708 [Leuconostoc fallax KCTC 3537]
Length = 176
Score = 41.4 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 46/142 (32%), Gaps = 23/142 (16%)
Query: 10 VSYWHLLCQSIRKIFFMSCFMLLFSFI--GWGIIPTILLKHLQFSYQRPLLSPQWKKDGN 67
V+ W Q + I ++ + + G+ I+ I++ + PL
Sbjct: 52 VNAWSFYQQVDKNIIYLVNAISFLIVVEFGYFIVRNIMMNLTRQPQTGPL---------- 101
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI-IISGGDPQKH 126
V+LG G +R+ + S + + I + SGG
Sbjct: 102 --VVLGGGLVQ-------GQYVGKIVGARVDLMAQDAHSIYKTTGEWPIMVFSGGQGPDE 152
Query: 127 GLAESIVYNNKL-LESGVERDD 147
L+E+ + L+ + +
Sbjct: 153 ILSEARAMRDYAVLKYKIPLEK 174
>gi|290474001|ref|YP_003466875.1| putative vancomycin sensitivity, oxidoreductase [Xenorhabdus
bovienii SS-2004]
gi|289173308|emb|CBJ80083.1| putative vancomycin sensitivity, oxidoreductase [Xenorhabdus
bovienii SS-2004]
Length = 239
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 8/110 (7%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI Y S K + +++SG + Q E I +++G+ + ++
Sbjct: 69 RIQGAANAYNSGKVNY----LLLSGDNAQLS-YNEPITMQKDFIKAGIPASKVIMDFAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
T + + + N +++ +H +R+ H GI+ +
Sbjct: 124 RTLDSIVRTRKV---FNANNFTIITQRFHCERALFIAMHMGIDAQCYAVS 170
>gi|260581178|ref|ZP_05848998.1| sanA protein [Haemophilus influenzae RdAW]
gi|1175853|sp|P45130|SANA_HAEIN RecName: Full=Protein sanA homolog
gi|1574720|gb|AAC22915.1| sanA protein (sanA) [Haemophilus influenzae Rd KW20]
gi|260092206|gb|EEW76149.1| sanA protein [Haemophilus influenzae RdAW]
Length = 244
Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 68/193 (35%), Gaps = 15/193 (7%)
Query: 9 IVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGN 67
+ + +L + F LL++ I+ ++ + + F + + +
Sbjct: 17 FIMFTTMLVKKFSPKFTALFRTLLYAIFALIILCLLVDRGISFYVRDKIFTNIDELPFRP 76
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
++LG + P + + SR+ L + K + +++SG D +
Sbjct: 77 CALVLGTSKYTVSGKPNVYYD------SRLMAAKSLIEQQKVNY----LLLSG-DNRTLQ 125
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
E L + GV + + + T + + + + K +VS +H +R
Sbjct: 126 YNEPRAMFRDLRKMGVPKTLMFRDFAGFRTLDSVIRADKIFQ---VKTFTIVSQKFHCER 182
Query: 188 SQLYFQHFGINTK 200
+ L Q I+
Sbjct: 183 ALLIAQAHNIDAI 195
>gi|319950773|ref|ZP_08024662.1| hypothetical protein ES5_14263 [Dietzia cinnamea P4]
gi|319435564|gb|EFV90795.1| hypothetical protein ES5_14263 [Dietzia cinnamea P4]
Length = 193
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 13/135 (9%), Positives = 48/135 (35%), Gaps = 8/135 (5%)
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ----KHGLAESIVYNNK 137
A ++P R + L + ++ ++ G + S +
Sbjct: 35 WGAFLLQPRGDEPVRADAVVMLAGADDGRHLYARDLVEAGYADTLLVSNPGGNSETVARR 94
Query: 138 L---LESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L + + + + + T+ A ++ + + +++V++ H R+ + ++
Sbjct: 95 LCTGIARPADAEVVCFSPEPRTTWGEALAVDAIARARGWERVLVVTNRPHTLRAGTWMRN 154
Query: 195 F-GINTKASCSDYLN 208
++ + + D ++
Sbjct: 155 ATDLDVRMTPIDRVD 169
>gi|261329634|emb|CBH12616.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 309
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 55/184 (29%), Gaps = 35/184 (19%)
Query: 15 LLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPL--LSPQWKKDGNIIVLL 72
+ + K ++F + + ++ LL +P++ +I++
Sbjct: 1 MRTRFRNKRRTWPLIAIVFIVLMFSVLRAKLLLQADTPGGAAEREANPKYLSTDTLIIVP 60
Query: 73 GNGTTIIPTIP---------------AIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTII 117
G+G P + S I + + + S+ +I
Sbjct: 61 GHGVLNAPNASEWKNESEWCLEPHQLRAGVVLPLCFASHIRRGLEILRDQINTSI---LI 117
Query: 118 ISGGD--PQKHGLAESIVYNNKLLE-------------SGVERDDIKLETQSLDTFQNAQ 162
SGG +E++ Y E + I E + D+++N
Sbjct: 118 FSGGQTCGIAGPRSEALGYYIVAKESKLFGIFEPAYVAKDIMNGRIFTEEFARDSYENLL 177
Query: 163 FSSS 166
FS +
Sbjct: 178 FSIA 181
>gi|148264641|ref|YP_001231347.1| hypothetical protein Gura_2597 [Geobacter uraniireducens Rf4]
gi|146398141|gb|ABQ26774.1| hypothetical protein Gura_2597 [Geobacter uraniireducens Rf4]
Length = 207
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 22/38 (57%)
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+T + +++ + K+ ++VSS YH++R ++ +
Sbjct: 120 NTHFELLEARRIMEKLGFKSALIVSSPYHMRRIKIIAE 157
>gi|304414296|ref|ZP_07395664.1| hypothetical protein REG_1381 [Candidatus Regiella insecticola
LSR1]
gi|304283510|gb|EFL91906.1| hypothetical protein REG_1381 [Candidatus Regiella insecticola
LSR1]
Length = 244
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 70/214 (32%), Gaps = 30/214 (14%)
Query: 21 RKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIP 80
R I + +F + I + K + Y+ L P + V+LG
Sbjct: 10 RIIISLLVIFGIFIIMAIAIDRWVSWKTTLYIYEEVQLLPHREVG----VVLGTAKYYR- 64
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
R + R+ + Y S K +++SG + Q H E L+
Sbjct: 65 -----RGVINQFYRYRMQGALNAYNSGKISY----LLLSGDNAQ-HNYNEPKTMRRDLIT 114
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
+GV DI L+ T + + + + +++ +H +R+ + G+ +
Sbjct: 115 AGVAPADIVLDYAGFRTLDSIVRTHKVFA---TNDFTIITQRFHCERALFIAFYMGLQAQ 171
Query: 201 ASCSDYLNAYYSIIPLSANFYLTELALKEYIGIL 234
IP N +L ++E
Sbjct: 172 CYA----------IPSPKNMFLVR--IREVFARF 193
>gi|152993110|ref|YP_001358831.1| hypothetical protein SUN_1523 [Sulfurovum sp. NBC37-1]
gi|151424971|dbj|BAF72474.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 201
Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 47/133 (35%), Gaps = 30/133 (22%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+ +II+ LG G Y RI + + LY++ SM ++++G
Sbjct: 32 DKPVESDIIICLGGGD-----------------YHRIDKAIALYRAGY--SMKHLLVLTG 72
Query: 121 GDPQKHGLAESIVYNNKLLES------GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
D + + Y + + + + L T + F + + +
Sbjct: 73 DDV--TPVRKRAGYKDFRVRLLEKKYTTIPYSHV---PGLLSTREEVLFIKRYMLSRGYR 127
Query: 175 NIILVSSAYHLKR 187
+ ++VS HL R
Sbjct: 128 SALIVSDPPHLGR 140
>gi|261867930|ref|YP_003255852.1| PurR protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|293390202|ref|ZP_06634536.1| PurR protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|261413262|gb|ACX82633.1| PurR protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|290950736|gb|EFE00855.1| PurR protein [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 237
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 58/153 (37%), Gaps = 9/153 (5%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + + Y+R+ RL+++ K +++SG D + E
Sbjct: 64 GLVLGTSKYFSNNTLNLFYYNRLLAAQRLFEARKVDY----LLLSG-DNRTLQYNEPRTM 118
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
L + GV ++ I L+ T + + + K ++ ++S +H +R+ +
Sbjct: 119 LQDLKKMGVPQEFIYLDFAGFRTLDSVIRADQVFKAH---SLTIISQKFHCERALFIAKF 175
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
I+ +DY YS + + F +
Sbjct: 176 HNIDAICFAADYPQ-VYSFVRVREFFARLQAVW 207
>gi|226334849|ref|YP_002784521.1| hypothetical membrane protein [Rhodococcus opacus B4]
gi|226246069|dbj|BAH56169.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 190
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 45/162 (27%), Gaps = 46/162 (28%)
Query: 64 KDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIF--------ETMRLYKSCKQHSMHCT 115
+ + IV+LG + + Q SR +L C+ T
Sbjct: 35 RSVDAIVVLGG---ERDGREEFAFDLARQGLSRNVVLSDPYGPYGTKLAARCETRDPRFT 91
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
+ + + T A F+ ++ +
Sbjct: 92 V------------------------RCIPPN-------PSTTLGEAVFTRNLATANGWNS 120
Query: 176 IILVSSAYHLKRSQLYFQHF--GINT--KASCSDYLNAYYSI 213
+++VS YHL R++ F G + Y A ++
Sbjct: 121 LMVVSWRYHLPRARYIFSRCLDGRDVLMVPVPGTYSVARWAY 162
>gi|167755271|ref|ZP_02427398.1| hypothetical protein CLORAM_00776 [Clostridium ramosum DSM 1402]
gi|237735019|ref|ZP_04565500.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|167705321|gb|EDS19900.1| hypothetical protein CLORAM_00776 [Clostridium ramosum DSM 1402]
gi|229381795|gb|EEO31886.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 240
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 40/154 (25%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
KK ++I++LGN I +LYK+ + +I+G
Sbjct: 20 DEKKKYDLILVLGNAIAETGLI-----------------AYQLYKTGHAYH----FMIAG 58
Query: 121 GDPQKHGL-----------------AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQF 163
G + +E+ ++ + E+ + I LE +S + +N QF
Sbjct: 59 GKGHTTDILINTIKEKYDIKDITKRSEAELFKYLIEENYGVDNTILLEKESTNCGENIQF 118
Query: 164 SSSMIKNMQG--KNIILVSSAYHLKRSQLYFQHF 195
+ ++K KNI+LV +R +H+
Sbjct: 119 AFKLLKKEDIIVKNILLVHDPLMQRRIDATARHY 152
>gi|229845344|ref|ZP_04465476.1| SanA [Haemophilus influenzae 6P18H1]
gi|229811797|gb|EEP47494.1| SanA [Haemophilus influenzae 6P18H1]
Length = 226
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 68/190 (35%), Gaps = 15/190 (7%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIV 70
+ +L + + F + LL++ I+ ++ + + F + + + +
Sbjct: 2 FTAMLVKKLSPKFTVLFRALLYAIFALIILCLLVDRGVSFYVRDKIFTNIDELPFRPCAL 61
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG + P + + SR+ L + K + +++SG D + E
Sbjct: 62 VLGTSKYTVSGKPNVYYD------SRLMAAKSLIEQQKVNY----LLLSG-DNRTLQYNE 110
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L + GV + + T + + + + K +VS +H +R+ L
Sbjct: 111 PRAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQ---VKTFTIVSQKFHCERALL 167
Query: 191 YFQHFGINTK 200
Q I+
Sbjct: 168 IAQAHNIDAI 177
>gi|310778884|ref|YP_003967217.1| protein of unknown function DUF218 [Ilyobacter polytropus DSM 2926]
gi|309748207|gb|ADO82869.1| protein of unknown function DUF218 [Ilyobacter polytropus DSM 2926]
Length = 215
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 65/181 (35%), Gaps = 18/181 (9%)
Query: 22 KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLG-NGTTIIP 80
K F + + + I + +K +Y + K+ ++LG + I
Sbjct: 2 KKLLKGIFYIFLIPVMFLCISNLSIKFFSKNYVYENVEEIPKRKVG--LVLGTSKYIIGG 59
Query: 81 TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE 140
I +Y+ + + Y +I+SG + QK E + LL+
Sbjct: 60 GINHFYKYRMEAAYNALMKGKVEY-----------LILSGDNSQKE-YNEPVRMRKTLLK 107
Query: 141 SGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTK 200
G+ + + L+ T + + + K+ +++S + +R+ + G++
Sbjct: 108 MGIPSEKLILDYAGFRTLDSVIRAHKV---FGQKSYLVISQKFQNERAVYIGRKRGVDVI 164
Query: 201 A 201
A
Sbjct: 165 A 165
>gi|148827035|ref|YP_001291788.1| hypothetical protein CGSHiGG_01690 [Haemophilus influenzae PittGG]
gi|148718277|gb|ABQ99404.1| SanA [Haemophilus influenzae PittGG]
Length = 226
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 66/190 (34%), Gaps = 15/190 (7%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIV 70
+ +L + F LL++ I+ ++ + + F + + + +
Sbjct: 2 FTAMLVKKFSPKFTALFRALLYAIFALIILCLLVDRGVSFYVRDKIFTNIDELPFRPYAL 61
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG + P + + SR+ L + K + +++SG D + E
Sbjct: 62 VLGTSKYTVSGKPNVYYD------SRLMAAKNLIEQQKVNY----LLLSG-DNRTLQYNE 110
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L + GV + + T + + + + K +VS +H +R+ L
Sbjct: 111 PRAMFRDLRKMGVSEASMFRDFAGFRTLDSVIRADKIFQ---VKTFTIVSQKFHCERALL 167
Query: 191 YFQHFGINTK 200
Q I+
Sbjct: 168 IAQAHNIDAI 177
>gi|302037993|ref|YP_003798315.1| hypothetical protein NIDE2684 [Candidatus Nitrospira defluvii]
gi|300606057|emb|CBK42390.1| protein of unknown function DUF218 [Candidatus Nitrospira defluvii]
Length = 215
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+T A + + +I+V+S YHL R++ F
Sbjct: 109 RNTIDEAVALRRIFARERFTKVIVVTSRYHLARARGVF 146
>gi|154506036|ref|ZP_02042774.1| hypothetical protein RUMGNA_03578 [Ruminococcus gnavus ATCC 29149]
gi|153793535|gb|EDN75955.1| hypothetical protein RUMGNA_03578 [Ruminococcus gnavus ATCC 29149]
Length = 402
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 43/127 (33%), Gaps = 28/127 (22%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
+K ++IV+L + A E + R + + I +S
Sbjct: 28 DYKNGHDVIVVLSAMGDTTDDLIAKAKEINLNPSKR--------EMDMLLTTGEQISVS- 78
Query: 121 GDPQKHGLAESIVYNNKLLESGVER---DDIKLETQSLDTFQNAQF----SSSMIKNMQG 173
+ + G+ + +++ S T+ NA+F S ++ +
Sbjct: 79 ------------LMAMAFHKLGIPAVSLNAFQVKMHSTSTYGNARFKKVESERILHELGY 126
Query: 174 KNIILVS 180
+ I++V+
Sbjct: 127 RKIVIVT 133
>gi|70982458|ref|XP_746757.1| DUF218 domain protein [Aspergillus fumigatus Af293]
gi|66844381|gb|EAL84719.1| DUF218 domain protein [Aspergillus fumigatus Af293]
gi|159123003|gb|EDP48123.1| DUF218 domain protein [Aspergillus fumigatus A1163]
Length = 263
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 47/122 (38%), Gaps = 17/122 (13%)
Query: 103 LYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIK------LETQSLD 156
LY++ + ++ P+ GL E+ V ++ + + I +E +S +
Sbjct: 72 LYEAIANDPRYAHLL-----PEIDGLPEAQVLHHIFRQ-CFDAPRILSSCRVLIEDRSTN 125
Query: 157 TFQNAQFSSSMIKNMQ--GKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSII 214
NA + +++ +++++V +R+ F+ + ++ + +
Sbjct: 126 CGANAIETKRLLEVNGICPESMLIVQDPTMSRRTVASFEKA---FSGQRTLRFTSWPTFV 182
Query: 215 PL 216
P
Sbjct: 183 PK 184
>gi|260060609|ref|YP_003193689.1| putative transport-related membrane protein [Robiginitalea
biformata HTCC2501]
gi|88784739|gb|EAR15908.1| putative transport-related membrane protein [Robiginitalea
biformata HTCC2501]
Length = 214
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 95 SRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQS 154
+RI T+ LY++ K +++SG + + E L+ G+ + I L+
Sbjct: 71 NRIAATLALYRAGKISF----VLVSGDNGTIY-YNEPDTIKKDLVAGGIPAERIFLDYAG 125
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
T + + + + ++S +H +R+ G+ +
Sbjct: 126 FRTLDSMVRAKIV---FGLDTVTVISQEFHNERALYIAGKKGLYARG 169
>gi|145630892|ref|ZP_01786669.1| acetyl-CoA carboxylase subunit beta [Haemophilus influenzae R3021]
gi|144983552|gb|EDJ91020.1| acetyl-CoA carboxylase subunit beta [Haemophilus influenzae R3021]
Length = 226
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 69/190 (36%), Gaps = 15/190 (7%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD-GNIIV 70
+ +L + + F LL++ I+ ++ + + F + + + ++ +
Sbjct: 2 FTAMLVKKLSPKFTALFCALLYAIFALIILCLLVDRGVSFYVRDKIFTNIYELPFRPYAL 61
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG + P + + SR+ L + K + +++SG D + E
Sbjct: 62 VLGTSKYTVNGKPNVYYD------SRLMAAKSLIEQQKVNY----LLLSG-DNRTLQYNE 110
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L + GV + + T + + + + + +VS +H +R+ L
Sbjct: 111 PRAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQ---VQAFTIVSQKFHCERALL 167
Query: 191 YFQHFGINTK 200
Q I+
Sbjct: 168 IAQAHNIDAI 177
>gi|167766714|ref|ZP_02438767.1| hypothetical protein CLOSS21_01220 [Clostridium sp. SS2/1]
gi|167711468|gb|EDS22047.1| hypothetical protein CLOSS21_01220 [Clostridium sp. SS2/1]
Length = 257
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 60/200 (30%), Gaps = 48/200 (24%)
Query: 66 GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQK 125
++I+ LG+ ++ LYK+ ++ GG
Sbjct: 38 ADVIIALGSDLPVVAET-----------------ACELYKA----GYGEKLMFCGGIGHS 76
Query: 126 H------------------GLAESIVYNNKLLES-GVERDDIKLETQSLDTFQNAQFSSS 166
+E+ +Y + +E I ++ S +T +N + +
Sbjct: 77 TVNLKKKVAKILNVETDQLPESEAEIYACLAKDKYQIESSSIFMDKTSTNTSENIKNAIQ 136
Query: 167 MIKNMQGKN--IILVSSAYHLKRSQLYF-----QHFGINTKASCSDYLNAYYSIIPLSAN 219
+ + K+ +IL+ KRS + I A LN+ +I +
Sbjct: 137 IFNDHTIKHETMILIQDPILQKRSYVTALDMFNDRQKIINYAPIIPKLNSDGTIENDTPY 196
Query: 220 FYLTELALKEYIGILIAYYR 239
+ L E + R
Sbjct: 197 LWEGTR-LYELALGEVYRLR 215
>gi|317506975|ref|ZP_07964744.1| DUF218 domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
gi|316254733|gb|EFV14034.1| DUF218 domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
Length = 184
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 23/174 (13%), Positives = 53/174 (30%), Gaps = 35/174 (20%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y P + + + +V+LG Y R + L + +
Sbjct: 31 YISPTIDSPLRP-ADAVVVLGG-----------------APYERFRYGIGL----GERGL 68
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL---ETQSLDTFQNAQFSSSMIK 169
++IS + + + ++L T AQ +
Sbjct: 69 APQVVISNSIGPDDPV---------MRQICAAPTHVRLTCFLPVPWSTRGEAQEIRRLAA 119
Query: 170 NMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLT 223
+ ++II+V++ H++R++ + +DY + + Y T
Sbjct: 120 SRHWRSIIVVTTTAHIERARYIVRRC-FAGDIQMTDYPERRGAWESVYGWIYQT 172
>gi|33152395|ref|NP_873748.1| SanA protein [Haemophilus ducreyi 35000HP]
gi|33148618|gb|AAP96137.1| SanA protein [Haemophilus ducreyi 35000HP]
Length = 230
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 48/124 (38%), Gaps = 19/124 (15%)
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+++SG D Q E V N L+ GV ++ + T + + + Q
Sbjct: 98 KLLVSG-DNQTVYYNEPKVMRNDLVNMGVPASQVEQDFAGFRTLDSIIRAKQV---YQLA 153
Query: 175 NIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEY---I 231
++VS +H +R+ +++ I+ + Y + + ++E+ +
Sbjct: 154 PFVIVSQRFHCERALFIAKYYDIDAVCFAAKYPAGHIQVR------------VREFFARL 201
Query: 232 GILI 235
G+L
Sbjct: 202 GMLW 205
>gi|301170000|emb|CBW29604.1| predicted protein [Haemophilus influenzae 10810]
Length = 226
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 67/190 (35%), Gaps = 15/190 (7%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIV 70
+ +L + + F LL++ I+ ++ + + F + + + +
Sbjct: 2 FTAMLVKKLSPKFTALFRALLYAIFALIILCLLVDRGVSFYVRDKIFTNIDELPFRPYAL 61
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG + P + + SR+ L + K + +++SG D + E
Sbjct: 62 VLGTSKYTVSGKPNVYYD------SRLTAAKNLIEQQKVNY----LLLSG-DNRTLQYNE 110
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L + GV + + T + + + + + +VS +H +R+ L
Sbjct: 111 PRAMFRDLRKMGVPETLMFRDFAGFRTLDSVVRADKIFQ---VQAFTIVSQKFHCERALL 167
Query: 191 YFQHFGINTK 200
Q I+
Sbjct: 168 IAQAHNIDAI 177
>gi|309366268|emb|CAP21792.2| hypothetical protein CBG_00502 [Caenorhabditis briggsae AF16]
Length = 565
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 17/106 (16%)
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ + LE S +T +N +F +I + LV S ++ F + IN A+ +
Sbjct: 327 QGRLLLERNSQETQKNLKFLEKIISELPTYQKFLVLS------TKGSFTNAHINLSATAT 380
Query: 205 DY-----LNAYYSIIPLSANFYLTELA----LKEYIG-ILI-AYYR 239
+ +Y P N + E + E+IG IL + R
Sbjct: 381 FFHVKIGKKVFYIAPPTPENLEIYERVEKEEMSEWIGDILWDQWIR 426
>gi|268571123|ref|XP_002640940.1| Hypothetical protein CBG00502 [Caenorhabditis briggsae]
Length = 611
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 17/106 (16%)
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCS 204
+ + LE S +T +N +F +I + LV S ++ F + IN A+ +
Sbjct: 369 QGRLLLERNSQETQKNLKFLEKIISELPTYQKFLVLS------TKGSFTNAHINLSATAT 422
Query: 205 DY-----LNAYYSIIPLSANFYLTELA----LKEYIG-ILI-AYYR 239
+ +Y P N + E + E+IG IL + R
Sbjct: 423 FFHVKIGKKVFYIAPPTPENLEIYERVEKEEMSEWIGDILWDQWIR 468
>gi|152992056|ref|YP_001357777.1| vancomycin resistance protein [Sulfurovum sp. NBC37-1]
gi|151423917|dbj|BAF71420.1| vancomycin resistance protein [Sulfurovum sp. NBC37-1]
Length = 215
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 8/108 (7%)
Query: 94 YSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ 153
RI L+K+ K + I++SG + E+ L+++GV I +
Sbjct: 66 LYRIRAAEALWKAGKVQA----IVVSGTN-DSRYYNETRSMYKDLIKAGVPPKYISQDFA 120
Query: 154 SLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKA 201
T + + ++ K I++S +HL+R+ + G
Sbjct: 121 GFRTLDSVMRAEAIFD---LKEYIIISQKFHLERAIFIARAKGQKVIG 165
>gi|15597262|ref|NP_250756.1| hypothetical protein PA2066 [Pseudomonas aeruginosa PAO1]
gi|116050015|ref|YP_791172.1| hypothetical protein PA14_37780 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218891978|ref|YP_002440845.1| hypothetical protein PLES_32561 [Pseudomonas aeruginosa LESB58]
gi|254240499|ref|ZP_04933821.1| hypothetical protein PA2G_01151 [Pseudomonas aeruginosa 2192]
gi|296389519|ref|ZP_06878994.1| hypothetical protein PaerPAb_15266 [Pseudomonas aeruginosa PAb1]
gi|313111112|ref|ZP_07796940.1| hypothetical protein PA39016_002990001 [Pseudomonas aeruginosa
39016]
gi|9948075|gb|AAG05454.1|AE004633_5 hypothetical protein PA2066 [Pseudomonas aeruginosa PAO1]
gi|115585236|gb|ABJ11251.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126193877|gb|EAZ57940.1| hypothetical protein PA2G_01151 [Pseudomonas aeruginosa 2192]
gi|218772204|emb|CAW27983.1| hypothetical protein PLES_32561 [Pseudomonas aeruginosa LESB58]
gi|310883442|gb|EFQ42036.1| hypothetical protein PA39016_002990001 [Pseudomonas aeruginosa
39016]
Length = 212
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 28/76 (36%), Gaps = 6/76 (7%)
Query: 109 QHSMHCTIIISGGDPQKHG----LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
+ + ++ +G E+ ++ GV I +E ++ + +N F+
Sbjct: 46 ERGLAERLLFTGNTGHWTRHLWVEPEAELFARHARARGVSDSLIVIEPRATNFAENIAFA 105
Query: 165 SSMIKNMQGKNIILVS 180
+ ++ + V+
Sbjct: 106 RELFPDL--RRATFVT 119
>gi|107101493|ref|ZP_01365411.1| hypothetical protein PaerPA_01002536 [Pseudomonas aeruginosa PACS2]
Length = 212
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 28/76 (36%), Gaps = 6/76 (7%)
Query: 109 QHSMHCTIIISGGDPQKHG----LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
+ + ++ +G E+ ++ GV I +E ++ + +N F+
Sbjct: 46 KRGLAERLLFTGNTGHWTRHLWVEPEAELFARHARARGVSDSLIVIEPRATNFAENIAFA 105
Query: 165 SSMIKNMQGKNIILVS 180
+ ++ + V+
Sbjct: 106 RELFPDL--RRATFVT 119
>gi|1161522|emb|CAA87766.1| SanA [Escherichia coli K-12]
Length = 180
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV+ DI L+
Sbjct: 69 RIQGAINAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRKDLIAAGVDPSDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
T + + + + I+++ +H +R+
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCERAL 154
>gi|159037942|ref|YP_001537195.1| hypothetical protein Sare_2346 [Salinispora arenicola CNS-205]
gi|157916777|gb|ABV98204.1| conserved hypothetical protein [Salinispora arenicola CNS-205]
Length = 244
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 33/97 (34%), Gaps = 25/97 (25%)
Query: 116 IIISGGDPQKHGLAESIVYNNKLLES-----GVER--------------------DDIKL 150
I+I GG + G++E LL + R DI +
Sbjct: 54 IVIGGGSSHRDGISEGEYTKRYLLANLARLEEFPRLKPLLDRLSGPQRAAFGRAVHDIII 113
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
Q +T + ++ + + ++ +++A H R
Sbjct: 114 TPQVRNTVAEIEAAAGIFAAHRVDRVLQIAAASHAPR 150
>gi|260434752|ref|ZP_05788722.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Synechococcus sp. WH 8109]
gi|260412626|gb|EEX05922.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Synechococcus sp. WH 8109]
Length = 496
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKNIILVSSAYHLKRSQLY 191
+ ++ + GVE + I LE + +T A +++ ++LV +A HL R
Sbjct: 80 IVAEQMRQIGVEPNAILLEPRGRNTAP-AVTVAALQATANGEDPLLLVLAADHLIRDAAQ 138
Query: 192 FQHF 195
F+
Sbjct: 139 FRQA 142
>gi|81428118|ref|YP_395117.1| phosphate ABC transporter ATP-binding protein [Lactobacillus sakei
subsp. sakei 23K]
gi|123755864|sp|Q38YC2|PSTB1_LACSS RecName: Full=Phosphate import ATP-binding protein PstB 1; AltName:
Full=ABC phosphate transporter 1; AltName:
Full=Phosphate-transporting ATPase 1
gi|78609759|emb|CAI54805.1| Phosphate ABC transporter, ATP-binding subunit 1 [Lactobacillus
sakei subsp. sakei 23K]
Length = 269
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 7/85 (8%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ L+ K + +SGG Q+ +A +I +L L+ S +T
Sbjct: 146 LKQAALWDQVKDSLNKSALALSGGQQQRLCIARAIAMKPDILLMDEPASA--LDPISTNT 203
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSA 182
+ +I+ + I++V+
Sbjct: 204 VEET-----LIRLKEQYTIVIVTHN 223
>gi|302680907|ref|XP_003030135.1| hypothetical protein SCHCODRAFT_44193 [Schizophyllum commune H4-8]
gi|300103826|gb|EFI95232.1| hypothetical protein SCHCODRAFT_44193 [Schizophyllum commune H4-8]
Length = 241
Score = 39.5 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 17/136 (12%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETM---RLYKSCKQHSMHCTIIISGGDPQK 125
I++ G+ +EP + R+ + + ++ SGG +
Sbjct: 7 IIVPGHSIWKGTDPDQWVLEPYQKGGRRLSALIKHIEIGAKLAAKDEKSLLVFSGGQTRP 66
Query: 126 HGLA-ESIVYNNKLLE---SGVERD-----DIKLETQSLDTFQNAQFSSSMIKNMQGK-- 174
E+ Y GV E +LD++QN FS + G+
Sbjct: 67 TSTTTEAESYLRLAQASNAFGVPASMYPFARATTEDYALDSYQNLLFSIARFHEYTGRYP 126
Query: 175 -NIILVSSAYHLKRSQ 189
I +V Y +KR++
Sbjct: 127 VKITVV--GYEMKRAR 140
>gi|315634363|ref|ZP_07889650.1| membrane protein SanA [Aggregatibacter segnis ATCC 33393]
gi|315476953|gb|EFU67698.1| membrane protein SanA [Aggregatibacter segnis ATCC 33393]
Length = 240
Score = 39.5 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 72/209 (34%), Gaps = 28/209 (13%)
Query: 8 LIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGI---IPTILLKHLQFSYQRPLLSPQWKK 64
+ + + S FM+ F +L + I + + ++ RP
Sbjct: 11 IYFTLTQMKRLSRYMALFMAFFAILLVIVDQTIGYYVRNDIYYDIEKVPNRPYG------ 64
Query: 65 DGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
++LG + Y+R+ RL++ K +++SG D +
Sbjct: 65 -----LVLGTSKYFSDNT------LNLFYYNRLLTAQRLFEKRKVDY----LLLSG-DNR 108
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E L + GV ++ I L+ T + + + + ++ ++S +H
Sbjct: 109 TLQYNEPRTMLKDLKKMGVPQEFIYLDFAGFRTLDSVVRADQVFQAH---SLTIISQKFH 165
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSI 213
+R+ + I+ +DY Y +
Sbjct: 166 CERALFIAKFHDIDAICFVADYPQGYTKV 194
>gi|46137725|ref|XP_390554.1| hypothetical protein FG10378.1 [Gibberella zeae PH-1]
Length = 259
Score = 39.5 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 116 IIISGGDPQKHG-LAESIVYNNK--------LLESGVERDDIKLETQSLDTFQNAQFSSS 166
++ SG +K ++E+ Y N LL + R + LE ++LD++ N FS S
Sbjct: 93 LVFSGAPTRKESQISEAAGYKNIAAANDYWGLLPNETARHAVLLEERALDSYHNILFSRS 152
Query: 167 MIKNMQ---GKNIILVSSAY 183
+I + +I +VS +
Sbjct: 153 LIYSRFKTWPTHITVVSHGF 172
>gi|302915036|ref|XP_003051329.1| hypothetical protein NECHADRAFT_104563 [Nectria haematococca mpVI
77-13-4]
gi|256732267|gb|EEU45616.1| hypothetical protein NECHADRAFT_104563 [Nectria haematococca mpVI
77-13-4]
Length = 233
Score = 39.5 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 106 SCKQHSMHCTIIISGGDPQKHG-LAESIVYNNK--------LLESGVERDDIKLETQSLD 156
+ T++ SGG +K ++E+ Y N LL+ G D+I +E ++LD
Sbjct: 51 ALAPDRSGSTLVFSGGPTRKETEISEAQSYANIAVEHDHWGLLQDGPSDDEILVEERALD 110
Query: 157 TFQNAQFS 164
++ N FS
Sbjct: 111 SYYNVLFS 118
>gi|317486198|ref|ZP_07945034.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Bilophila wadsworthia 3_1_6]
gi|316922555|gb|EFV43805.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Bilophila wadsworthia 3_1_6]
Length = 469
Score = 39.5 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 147 DIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
I LE ++ +T F++ +++ ++ I+LV + H+ R + F
Sbjct: 77 RILLEPEARNTAPAIAFAAFVVQKLEPDGILLVLPSDHMLRDEKTF 122
>gi|212546823|ref|XP_002153565.1| DUF218 domain protein [Penicillium marneffei ATCC 18224]
gi|210065085|gb|EEA19180.1| DUF218 domain protein [Penicillium marneffei ATCC 18224]
Length = 263
Score = 39.5 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 44/116 (37%), Gaps = 29/116 (25%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA--ESIVYNNKLLESG------------ 142
+ +R Y+ ++ SGG ++ + E Y N ++
Sbjct: 51 VKAGLREYEKSGNSG---VLVFSGGATKRGKTSLTEGESYLNLARDNNFFLSNHQQVSAN 107
Query: 143 VERDDIKLETQSLDTFQNAQFSSSMIKNMQ----GKNIILVSSAY--------HLK 186
++ +I ET + D++QN FS + + K++ +++ A+ HL
Sbjct: 108 IDTTNILAETHATDSYQNILFSLLLYRQHTQLAYPKSVTIITHAFKRRRFLDLHLP 163
>gi|30995434|ref|NP_439417.2| SanA [Haemophilus influenzae Rd KW20]
Length = 226
Score = 39.5 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 67/190 (35%), Gaps = 15/190 (7%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIV 70
+ +L + F LL++ I+ ++ + + F + + + +
Sbjct: 2 FTTMLVKKFSPKFTALFRTLLYAIFALIILCLLVDRGISFYVRDKIFTNIDELPFRPCAL 61
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG + P + + SR+ L + K + +++SG D + E
Sbjct: 62 VLGTSKYTVSGKPNVYYD------SRLMAAKSLIEQQKVNY----LLLSG-DNRTLQYNE 110
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L + GV + + + T + + + + K +VS +H +R+ L
Sbjct: 111 PRAMFRDLRKMGVPKTLMFRDFAGFRTLDSVIRADKIFQ---VKTFTIVSQKFHCERALL 167
Query: 191 YFQHFGINTK 200
Q I+
Sbjct: 168 IAQAHNIDAI 177
>gi|145636873|ref|ZP_01792538.1| SanA [Haemophilus influenzae PittHH]
gi|145269954|gb|EDK09892.1| SanA [Haemophilus influenzae PittHH]
Length = 226
Score = 39.5 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 66/191 (34%), Gaps = 17/191 (8%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL--SPQWKKDGNII 69
+ +L + F + F LF I II +L+ Y R + +
Sbjct: 2 FTAMLVKKFSPKF-TALFRALFYAIFALIILCLLVDRGVSFYVRDKIFTNIDELPFRPCA 60
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG + P + + SR+ L + K + +++SG D +
Sbjct: 61 LVLGTSKYTVSGKPNVYYD------SRLMAAKSLIEQQKVNY----LLLSG-DNRTLQYN 109
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E L + GV + + T + + + + + +VS +H +R+
Sbjct: 110 EPRAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQ---VQTFTIVSQKFHCERAL 166
Query: 190 LYFQHFGINTK 200
L Q I+
Sbjct: 167 LIAQAHNIDAI 177
>gi|149184399|ref|ZP_01862717.1| alanyl-tRNA synthetase [Erythrobacter sp. SD-21]
gi|148831719|gb|EDL50152.1| alanyl-tRNA synthetase [Erythrobacter sp. SD-21]
Length = 132
Score = 39.5 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 16/129 (12%)
Query: 67 NIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
++V+LG+ + S + SRI + S+ ++ +GG
Sbjct: 12 TLVVVLGHENDRDGNL-------SDDALSRISAALEYVSDEPSDSID--LLATGGYGDYF 62
Query: 127 GLAE----SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN--IILVS 180
L++ +++ + V+ + T S T ++ ++ + K I + +
Sbjct: 63 NLSDRAHGALMLEEIAKSAPVDLRRLGW-TASCGTDEDILAVRRLLVDAGRKPNCIRIFT 121
Query: 181 SAYHLKRSQ 189
SAYH R+
Sbjct: 122 SAYHAPRAI 130
>gi|145638833|ref|ZP_01794441.1| acetyl-CoA carboxylase subunit beta [Haemophilus influenzae PittII]
gi|145271805|gb|EDK11714.1| acetyl-CoA carboxylase subunit beta [Haemophilus influenzae PittII]
gi|309750816|gb|ADO80800.1| SanA protein [Haemophilus influenzae R2866]
Length = 226
Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 67/190 (35%), Gaps = 15/190 (7%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIV 70
+ +L + + F LL++ I+ ++ + + F + + + +
Sbjct: 2 FTAMLVKKLSPKFTALFRALLYAIFALIILCLLVDRGVSFYVRDKIFTNIDELPFRPCAL 61
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG + P + + SR+ L + K + +++SG D + E
Sbjct: 62 VLGTSKYTVSGKPNVYYD------SRLMAAKSLIEQQKVNY----LLLSG-DNRTLQYNE 110
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L + GV + + T + + + K + +VS +H +R+ L
Sbjct: 111 PRAMFRDLRKMGVPETLMFRDFAGFRTLDSVVRADKIFK---VQAFTIVSQKFHCERALL 167
Query: 191 YFQHFGINTK 200
+ I+
Sbjct: 168 IAKAHNIDAI 177
>gi|319776147|ref|YP_004138635.1| SanA [Haemophilus influenzae F3047]
gi|317450738|emb|CBY86958.1| SanA [Haemophilus influenzae F3047]
Length = 226
Score = 39.1 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 66/190 (34%), Gaps = 15/190 (7%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIV 70
+ +L + F LL++ I+ ++ + + F + + + +
Sbjct: 2 FTAMLVKKFSPNFTALFRALLYAIFALIILCLLVDRGVSFYVRDKIFTNIDELPFRPYAL 61
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG + P + + SR+ L + K + +++SG D + E
Sbjct: 62 VLGTSKYTVSGKPNVYYD------SRLMAAKSLIEQQKVNY----LLLSG-DNRTLQYNE 110
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L + GV + + T + + + + + +VS +H +R+ L
Sbjct: 111 PRAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQ---VQAFTIVSQKFHCERALL 167
Query: 191 YFQHFGINTK 200
Q I+
Sbjct: 168 IAQAHNIDAI 177
>gi|167010036|ref|ZP_02274967.1| hypothetical protein Ftulh_04749 [Francisella tularensis subsp.
holarctica FSC200]
Length = 88
Score = 39.1 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+FLI + I+F+ +++ IG G++ TIL L+ + +
Sbjct: 18 LFLIALIITCIFSKGYLIYFIVALTIVYYLIGNGVLGTILALPLKSE----STDIKACAN 73
Query: 66 GNIIVLLGNGTTI 78
I+LLG G
Sbjct: 74 TKGIILLGAGINN 86
>gi|296417476|ref|XP_002838383.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634313|emb|CAZ82574.1| unnamed protein product [Tuber melanosporum]
Length = 216
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 22/106 (20%)
Query: 116 IIISGGDPQK--HGLAESIVYNNKL--LESGVER--DDIKLETQSLDTFQNAQFSSS--- 166
++ SGG+ + L+E+ Y L+ E + D++QN FS +
Sbjct: 32 LVFSGGETKSAAGPLSEAESYYRLAHTLDLLTPSLLPRTTTEVHARDSYQNLVFSIARFH 91
Query: 167 MIKNMQGKNIILVSSAY--------HLKRSQLY----FQHFGINTK 200
+ N +I L+S A+ HL R+ Y F+ GI+ K
Sbjct: 92 ELTNTYPSSIALISHAFKESRFLHNHL-RAISYPEANFKFVGIDPK 136
>gi|54027397|ref|YP_121639.1| hypothetical protein nfa54230 [Nocardia farcinica IFM 10152]
gi|54018905|dbj|BAD60275.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 178
Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 50/174 (28%), Gaps = 36/174 (20%)
Query: 53 YQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
Y RP + I++LG + +RL +
Sbjct: 28 YVRP--RTDAPAPADAILVLGGAHDGREEL-----------------GLRLARD----GY 64
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
++ S E N++ G + I + T + + +
Sbjct: 65 APRVLFS-------DPYEYSARMNRICHGGYRFEVICFDPDPRTTRGEGRELARRARAEG 117
Query: 173 GKNIILVSSAYHLKRSQLYFQH------FGINTKASCSDYLNAYYSIIPLSANF 220
+ +I+V+ H+ R++ ++ + + S AY + +A
Sbjct: 118 WQRVIVVTFTPHISRARYIIGKCWDGELLFVDPRPALSIPRWAYDYLYQSAAYL 171
>gi|254367890|ref|ZP_04983910.1| hypothetical protein FTHG_01186 [Francisella tularensis subsp.
holarctica 257]
gi|134253700|gb|EBA52794.1| hypothetical protein FTHG_01186 [Francisella tularensis subsp.
holarctica 257]
Length = 91
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+FLI + I+F+ +++ IG G++ TIL L+ + +
Sbjct: 21 LFLIALIITCIFSKGYLIYFIVALTIVYYLIGNGVLGTILALPLKSE----STDIKACAN 76
Query: 66 GNIIVLLGNGTTI 78
I+LLG G
Sbjct: 77 TKGIILLGAGINN 89
>gi|145634406|ref|ZP_01790116.1| SanA [Haemophilus influenzae PittAA]
gi|145268386|gb|EDK08380.1| SanA [Haemophilus influenzae PittAA]
gi|309972997|gb|ADO96198.1| SanA protein [Haemophilus influenzae R2846]
Length = 226
Score = 39.1 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 65/191 (34%), Gaps = 17/191 (8%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP--LLSPQWKKDGNII 69
+ +L + F + F LF I II +L+ Y R ++
Sbjct: 2 FTAMLVKKFSPKF-TALFRALFYAIFALIILCLLVDRGVSFYVRDKIFINIDELPFRPYA 60
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
++LG P + + SR+ L + K + +++SG D +
Sbjct: 61 LVLGTSKYTASGKPNVYYD------SRLMAAKSLIEQQKVNY----LLLSG-DNRTLQYN 109
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E L + GV + + T + + + + + +VS +H +R+
Sbjct: 110 EPRAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQ---VQAFTIVSQKFHCERAL 166
Query: 190 LYFQHFGINTK 200
L Q I+
Sbjct: 167 LIAQAHNIDAI 177
>gi|329123313|ref|ZP_08251879.1| membrane protein SanA [Haemophilus aegyptius ATCC 11116]
gi|327471409|gb|EGF16859.1| membrane protein SanA [Haemophilus aegyptius ATCC 11116]
Length = 226
Score = 39.1 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 67/190 (35%), Gaps = 15/190 (7%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIV 70
+ +L + + F LL++ I+ ++ + + F + + + +
Sbjct: 2 FTAMLVKKLSPKFTALFRALLYAIFALIILCLLVDRGVSFYVRDKIFTNIDELPFRPCAL 61
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG + P + + SR+ L + K + +++SG D + E
Sbjct: 62 VLGTSKYTVSGKPNVYYD------SRLMAAKSLIEQQKVNY----LLLSG-DNRTLQYNE 110
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L + GV + + T + + + + + +VS +H +R+ L
Sbjct: 111 PRAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQ---VQAFTIVSQKFHCERALL 167
Query: 191 YFQHFGINTK 200
Q I+
Sbjct: 168 IAQAHNIDAI 177
>gi|317153120|ref|YP_004121168.1| hypothetical protein Daes_1408 [Desulfovibrio aespoeensis Aspo-2]
gi|316943371|gb|ADU62422.1| protein of unknown function DUF218 [Desulfovibrio aespoeensis
Aspo-2]
Length = 218
Score = 39.1 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 53/146 (36%), Gaps = 26/146 (17%)
Query: 67 NIIVLLGNGT---TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDP 123
I +L+G G A I P R+ + LY I++S +
Sbjct: 23 GIALLIGAGYWMRVNDAPRQADYIIPLAGDSGRLIKAAELYHQ----GFAPVILLS--NS 76
Query: 124 QKHGLAESIVYNNKLLESGVERDD------IKLETQS----------LDTFQNAQFSSSM 167
+ + ++ ++RD+ L Q+ + T + A+
Sbjct: 77 VELPVTGLDRLRWEIGFPNLDRDEYHMRLLTVLGAQASVAGSFGYGHVSTVEEAEALREY 136
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQ 193
+K + ++LV+S H +R+++ F+
Sbjct: 137 LKG-KPARLLLVTSPTHARRAKMIFE 161
>gi|269119523|ref|YP_003307700.1| hypothetical protein Sterm_0901 [Sebaldella termitidis ATCC 33386]
gi|268613401|gb|ACZ07769.1| protein of unknown function DUF218 [Sebaldella termitidis ATCC
33386]
Length = 266
Score = 39.1 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 26/128 (20%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-----------------QKHGLAESIVYNNKLL 139
I + ++ ++ISGG + +E+ + + L+
Sbjct: 50 IIYGWDIAAKAVTDNLADRLLISGGIGHTTSELWKIVSENFPAIKAENHSEADIIADYLM 109
Query: 140 ES-GVERDDIKLETQSLDTFQNAQFSSSMIKNM--QGKNIILVSSAYHLKR--S--QLYF 192
+ + +E QS + N F+ + +K KNII++ + +R + +L F
Sbjct: 110 QKYNINNP--LIENQSTNCGNNVTFALNTLKENFISPKNIIIIQDSTMQQRMDATFKLLF 167
Query: 193 QHFGINTK 200
+ IN
Sbjct: 168 KDNSINVI 175
>gi|190344422|gb|EDK36093.2| hypothetical protein PGUG_00191 [Meyerozyma guilliermondii ATCC
6260]
Length = 282
Score = 39.1 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 117 IISGGDPQKH--GLAESIVYNNKLLESGVER---DDIKLETQSLDTFQNAQFS 164
I+SGG +K ++E+ Y + + ++ + + LE + D+F+N FS
Sbjct: 89 IVSGGQTKKECGPISEAQSYYSLATQLCNDKNIVERVHLEEYARDSFENVLFS 141
>gi|328950144|ref|YP_004367479.1| protein of unknown function DUF218 [Marinithermus hydrothermalis
DSM 14884]
gi|328450468|gb|AEB11369.1| protein of unknown function DUF218 [Marinithermus hydrothermalis
DSM 14884]
Length = 206
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 135 NNKLLESGVERDDI-KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
L++G+ + I + + T+ AQ + + ++ ++I+V+ AYH
Sbjct: 98 QAVALQAGLNPERIRVVPGYARTTYAEAQNARAFLEGRGWTSLIVVTDAYH 148
>gi|302804051|ref|XP_002983778.1| hypothetical protein SELMODRAFT_118945 [Selaginella moellendorffii]
gi|300148615|gb|EFJ15274.1| hypothetical protein SELMODRAFT_118945 [Selaginella moellendorffii]
Length = 240
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 15/90 (16%)
Query: 116 IIISGGDPQKH--GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS---SMIKN 170
++ SGG+ +K +E+ Y + + RD E + D+F+N FS +
Sbjct: 69 LLFSGGETRKEAGPRSEAQSYWSVADANDCVRDRAVTEEYARDSFENLLFSICRFRELTG 128
Query: 171 MQGKNIILVSSAYH--------LKRSQLYF 192
+NI +VS YH L R+ L F
Sbjct: 129 QYPQNITVVS--YHFKQHRFVALHRAALKF 156
>gi|297845116|ref|XP_002890439.1| hypothetical protein ARALYDRAFT_472372 [Arabidopsis lyrata subsp.
lyrata]
gi|297336281|gb|EFH66698.1| hypothetical protein ARALYDRAFT_472372 [Arabidopsis lyrata subsp.
lyrata]
Length = 341
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 18/94 (19%)
Query: 116 IIISGGDPQKH--GLAESIVY------NNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
++ SGG+ +K +E+ Y + V R E + D+F+N FS
Sbjct: 165 LLFSGGETRKDAGPRSEAQSYWAVAESKGWFGKDEV-RSRALTEEHARDSFENLLFSVCR 223
Query: 168 IKNMQG---KNIILVSSAY------HLKRSQLYF 192
+ + G +NI +VS + HL RS + F
Sbjct: 224 FRELTGSYPQNITVVSYDFKEKRFAHLHRSAMGF 257
>gi|261492268|ref|ZP_05988831.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261494489|ref|ZP_05990975.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261309873|gb|EEY11090.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261312047|gb|EEY13187.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 227
Score = 38.7 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 63/183 (34%), Gaps = 18/183 (9%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLL--SPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPS 90
F +G I+ +L+ L R + + V+LG + +
Sbjct: 31 FPLLGIAIL--LLVDSLTSYIVRDKIYTDSKQIPYREYAVVLGTAKFYSKDVINQYYK-- 86
Query: 91 FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKL 150
R+ +L + K + +++SG + + E + LL+ G+ IK
Sbjct: 87 ----YRLEAAKQLVQEGKVNQ----LLLSGDNKTPY-YNEPKTMTSDLLKMGIATSKIKQ 137
Query: 151 ETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAY 210
+ TF + + + K ++S +H +R+ + I+ + Y
Sbjct: 138 DYAGYTTFDSIIRAKKVYK---LPPFTIISQKFHCERALFIAKFRDIDAICYAATYPEGA 194
Query: 211 YSI 213
Y +
Sbjct: 195 YQV 197
>gi|299138643|ref|ZP_07031821.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
gi|298599279|gb|EFI55439.1| protein of unknown function DUF218 [Acidobacterium sp. MP5ACTX8]
Length = 203
Score = 38.7 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 57/185 (30%), Gaps = 34/185 (18%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG 121
+ ++IV+L R + + L ++ M S
Sbjct: 35 QPERSDVIVVLAGDHDDH----------------RYWGALALLRAGYGQKMVMD--ASSD 76
Query: 122 DPQKHGLAESIVYNNKLLESGVERDDI-KLETQSLDTFQNAQFSSSMIKNMQG--KNIIL 178
AE +G + I + T Q A + + + ++ +L
Sbjct: 77 LTYGQTSAE-RAAAFVRQSAGSNQSQISICTITNDSTVQEAANIRNCLAGLHPAPQSALL 135
Query: 179 VSSAYHLKRSQLYFQ------HFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIG 232
V+S +H +R+ + H+ + + + ++S N + AL E+
Sbjct: 136 VTSDFHTRRALSIVRSRLPQYHWSVAAVNDSTIFGQPWWS------NREWAKTALYEWEK 189
Query: 233 ILIAY 237
++
Sbjct: 190 LVWWR 194
>gi|302422230|ref|XP_003008945.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261352091|gb|EEY14519.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 257
Score = 38.7 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 17/101 (16%)
Query: 106 SCKQHSMHCTIIISGGDPQKHG-LAESIVYNNKLLESG----VER-----DDIKLETQSL 155
C + + ++ SGG ++ L+E+ Y N + + I E Q+L
Sbjct: 51 QCISENHNAVLVFSGGSTRRETRLSEAQSYANLASANNYFDILPTGSDTTSRIFTEEQAL 110
Query: 156 DTFQNAQFSS-SMIKNMQ----GKNIILVSSAYHLKRSQLY 191
D++ N FS + + + I +VS A+ KR+++
Sbjct: 111 DSYHNVLFSVIAFWRRYDFVAWPQLITIVSHAF--KRARIV 149
>gi|308275051|emb|CBX31650.1| hypothetical protein N47_E51620 [uncultured Desulfobacterium sp.]
Length = 180
Score = 38.7 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLY 191
+T + I+ K II VSS+YH++R +L
Sbjct: 89 NTHIELLVAKDYIRRNHFKKIIFVSSSYHMRRIKLI 124
>gi|328352845|emb|CCA39243.1| Uncharacterized protein YOR238W [Pichia pastoris CBS 7435]
Length = 245
Score = 38.7 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
Query: 116 IIISGGDPQKH--GLAESIVY-----NNKLLESGVERDDIKLETQSLDTFQNAQFS---- 164
+I SGG ++ ++E+ Y L E+ I E + D+F+N FS
Sbjct: 64 LIFSGGQTKESCGPISEAQSYWFLAKALGLYENQSVASRIHTEEYARDSFENVLFSILRY 123
Query: 165 SSMIKNMQGKNIILV 179
++ + K++ +V
Sbjct: 124 KEIVGDY-PKSLTIV 137
>gi|255325802|ref|ZP_05366894.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
gi|255297014|gb|EET76339.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
Length = 481
Score = 38.7 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK--IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+L + FL V+ W L Q+ R+ F++ +LLF I W + +
Sbjct: 246 LLAALFFLAVAQWWLWRQTRRRFNRGFLTASVLLFLAISWVALSNLATWSTGHQGFETAS 305
Query: 59 SP 60
P
Sbjct: 306 RP 307
>gi|255570386|ref|XP_002526152.1| conserved hypothetical protein [Ricinus communis]
gi|223534529|gb|EEF36228.1| conserved hypothetical protein [Ricinus communis]
Length = 341
Score = 38.7 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 73/203 (35%), Gaps = 43/203 (21%)
Query: 29 FMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ---------WKKDGNIIVLLGNGTTII 79
++ + GI ++L + Y+ P+ + K N++++ G+
Sbjct: 59 LIVFIISLSLGITILVVLALYESRYRTMNSYPKLVMAKNDYPFAKLKNLVMVAGHSVYTS 118
Query: 80 PTIPAIRIEPSF--QSYSR-----------IFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+ + E S+ +SY R I E +++ + ++ SGG+ +K
Sbjct: 119 NSCGKVDKEDSWFLESYQRHPGQAATFITHIQEGVQIAAKDDE----ALLLFSGGETRKD 174
Query: 127 --GLAESIVY------NNKLLESGVERDDIKLETQSLDTFQNAQFSS---SMIKNMQGKN 175
+E+ Y R E + D+F+N FS + +N
Sbjct: 175 AGPRSEAQSYWTVAESKGWFGNEESVRWRALTEEHARDSFENLLFSVCRFRELTGAYPQN 234
Query: 176 IILVSSAY------HLKRSQLYF 192
I +VS + HL RS + F
Sbjct: 235 ITVVSYDFKKDRFAHLHRSAIDF 257
>gi|254572055|ref|XP_002493137.1| Putative protein of unknown function [Pichia pastoris GS115]
gi|238032935|emb|CAY70958.1| Putative protein of unknown function [Pichia pastoris GS115]
Length = 261
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
Query: 116 IIISGGDPQKH--GLAESIVY-----NNKLLESGVERDDIKLETQSLDTFQNAQFS---- 164
+I SGG ++ ++E+ Y L E+ I E + D+F+N FS
Sbjct: 80 LIFSGGQTKESCGPISEAQSYWFLAKALGLYENQSVASRIHTEEYARDSFENVLFSILRY 139
Query: 165 SSMIKNMQGKNIILV 179
++ + K++ +V
Sbjct: 140 KEIVGDY-PKSLTIV 153
>gi|145633280|ref|ZP_01789011.1| SanA [Haemophilus influenzae 3655]
gi|144986126|gb|EDJ92716.1| SanA [Haemophilus influenzae 3655]
Length = 226
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 66/190 (34%), Gaps = 15/190 (7%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIV 70
+ +L + F LL++ I+ ++ + + F + + + +
Sbjct: 2 FSAMLVKKFSPKFTALFRALLYAIFALIILCLLVDRGVSFYVRDKIFTNIDELPFRPYAL 61
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG + P + + SR+ L + K + +++SG D + E
Sbjct: 62 VLGTSKYTVSGKPNVYYD------SRLTAAKSLIEQQKVNY----LLLSG-DNRTLQYNE 110
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L + GV + + T + + + + + +VS +H +R+ L
Sbjct: 111 PRAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQ---VQAFTIVSQKFHCERALL 167
Query: 191 YFQHFGINTK 200
Q I+
Sbjct: 168 IAQAHNIDAI 177
>gi|52424978|ref|YP_088115.1| SanA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307030|gb|AAU37530.1| SanA protein [Mannheimia succiniciproducens MBEL55E]
Length = 237
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 52/141 (36%), Gaps = 14/141 (9%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
VLLG R P+ +R+ L+KS K +++SG D +
Sbjct: 71 VLLG------TAKYFARNTPNLFYVNRLNAAEALFKSAKIDY----LLLSG-DNRTLQYN 119
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E L + G+ + + ++ T + + + +++++ +H +R+
Sbjct: 120 EPRTMFKDLRKKGIGEEFLYMDFAGFRTLDSIIRAKEI---FNATPMVIITQRFHCERAL 176
Query: 190 LYFQHFGINTKASCSDYLNAY 210
+ I+ ++Y Y
Sbjct: 177 FIAKFHHIDAICFAAEYPKDY 197
>gi|311740951|ref|ZP_07714777.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303987|gb|EFQ80064.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 481
Score = 38.3 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK--IFFMSCFMLLFSFIGWGIIPTILLKHLQFS 52
+L + FL V+ W L Q+ R+ F++ +LLF I W + +
Sbjct: 246 LLAALFFLAVAQWWLWRQTRRRFNRGFLTASVLLFLAISWVALSNLATWSTGHQ 299
>gi|75764088|ref|ZP_00743684.1| Hypothetical cytosolic protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74488426|gb|EAO52046.1| Hypothetical cytosolic protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 63
Score = 38.3 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 11/67 (16%)
Query: 168 IKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ K+ ++VS+ YHL R+++ + G+ +A + + I Y +
Sbjct: 1 MDLYNVKHAVVVSNTYHLYRTKIIAKRLGMKMEALAA------ETPIRSKRKMY-----V 49
Query: 228 KEYIGIL 234
+EY I+
Sbjct: 50 REYAAIM 56
>gi|148825852|ref|YP_001290605.1| hypothetical protein CGSHiEE_04065 [Haemophilus influenzae PittEE]
gi|229846836|ref|ZP_04466943.1| SanA [Haemophilus influenzae 7P49H1]
gi|319896956|ref|YP_004135151.1| sana [Haemophilus influenzae F3031]
gi|148716012|gb|ABQ98222.1| SanA [Haemophilus influenzae PittEE]
gi|229810325|gb|EEP46044.1| SanA [Haemophilus influenzae 7P49H1]
gi|317432460|emb|CBY80816.1| SanA [Haemophilus influenzae F3031]
Length = 226
Score = 38.3 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 64/190 (33%), Gaps = 15/190 (7%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY-QRPLLSPQWKKDGNIIV 70
+ +L + F L ++ I+ ++ + + F + ++ +
Sbjct: 2 FTAMLVKKFSPKFTALFRALFYAIFALIILCLLVDRGVSFYVCDKIFINIDELPFRPYAL 61
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG P + + SR+ L + K + +++SG D + E
Sbjct: 62 VLGTSKYTASGKPNVYYD------SRLMAAKSLIEQQKVNY----LLLSG-DNRTLQYNE 110
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L + GV + + T + + + + + +VS +H +R+ L
Sbjct: 111 PRAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQ---VQAFTIVSQKFHCERALL 167
Query: 191 YFQHFGINTK 200
Q I+
Sbjct: 168 IAQAHNIDAI 177
>gi|312220525|emb|CBY00466.1| predicted protein [Leptosphaeria maculans]
Length = 339
Score = 38.3 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 108 KQHSMHCTIIISGGD--PQKHGLAESIVYNNKLLESGVERDD--------------IKLE 151
++H +++SGG P + ++E+ Y + L + + LE
Sbjct: 132 QEHPPSNLLVLSGGATKPSQAPMSEARSYYHAALAEELAEGHLHGGRAHRMFSKGYVLLE 191
Query: 152 TQSLDTFQNAQFSSSMIKNMQG---KNIILVSSAY 183
Q++D+ QN FS + K G K + +++ A+
Sbjct: 192 EQAIDSLQNLLFSILLFKKTTGKYPKQVRVITHAF 226
>gi|28379761|ref|NP_786653.1| hypothetical protein lp_3432 [Lactobacillus plantarum WCFS1]
gi|308181988|ref|YP_003926116.1| hypothetical protein LPST_C2811 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|28272602|emb|CAD65531.1| unknown [Lactobacillus plantarum WCFS1]
gi|308047479|gb|ADO00023.1| hypothetical protein LPST_C2811 [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 231
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 14/108 (12%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP------------QKHGLAESIVYNNKLLESGVE 144
+ T Q +II+GG K +E+ + L+
Sbjct: 34 LPATATAAGQLAQDYQLPLLIIAGGVGHATKYLRQNLNLPKSQASEAELMAT-LVRKTGY 92
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ I+L+ S +T NA + + + ++++LV +R+ L F
Sbjct: 93 QGSIRLDKTSTNTGSNATHARA-LAPTDWRHVLLVQDPLLARRTTLTF 139
>gi|15218978|ref|NP_173559.1| unknown protein [Arabidopsis thaliana]
gi|42571573|ref|NP_973877.1| unknown protein [Arabidopsis thaliana]
gi|332191973|gb|AEE30094.1| uncharacterized protein [Arabidopsis thaliana]
gi|332191974|gb|AEE30095.1| uncharacterized protein [Arabidopsis thaliana]
Length = 342
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 18/94 (19%)
Query: 116 IIISGGDPQKH--GLAESIVY------NNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
++ SGG+ +K +E+ Y ++ V R E + D+F+N FS
Sbjct: 166 LLFSGGETRKDAGPRSEAQSYWAVAESKGWFGKNEV-RSRALTEEHARDSFENLLFSVCR 224
Query: 168 IKNMQG---KNIILVSSAY------HLKRSQLYF 192
+ + G +NI +VS + HL RS + F
Sbjct: 225 FRELTGSYPQNITVVSYDFKEERFAHLHRSAMGF 258
>gi|294673316|ref|YP_003573932.1| hypothetical protein PRU_0561 [Prevotella ruminicola 23]
gi|294474322|gb|ADE83711.1| conserved domain protein [Prevotella ruminicola 23]
Length = 459
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 14/80 (17%)
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQ-----NAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+Y + E + + L++ +TF+ N F + +++S++H+ R
Sbjct: 74 IYRTLVEEYHIPEERFVLDSCGYNTFRSLWDMNLFF--------KQTRFYILTSSFHIAR 125
Query: 188 SQLYFQHFGINTKAS-CSDY 206
S + G + SDY
Sbjct: 126 SVRIARWLGYDAWGIDISDY 145
>gi|28393587|gb|AAO42213.1| unknown protein [Arabidopsis thaliana]
Length = 342
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 18/94 (19%)
Query: 116 IIISGGDPQKH--GLAESIVY------NNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
++ SGG+ +K +E+ Y ++ V R E + D+F+N FS
Sbjct: 166 LLFSGGETRKDAGPRSEAQSYWAVAESKGWFGKNEV-RSRALTEEHARDSFENLLFSVCR 224
Query: 168 IKNMQG---KNIILVSSAY------HLKRSQLYF 192
+ + G +NI +VS + HL RS + F
Sbjct: 225 FRELTGSYPQNITVVSYDFKEERFAHLHRSAMGF 258
>gi|262376715|ref|ZP_06069943.1| predicted protein [Acinetobacter lwoffii SH145]
gi|262308425|gb|EEY89560.1| predicted protein [Acinetobacter lwoffii SH145]
Length = 155
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 14/132 (10%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLK-HLQFSYQRPLLSP 60
L ++I + + L SI++ S F LF WG ++ F+Y + ++P
Sbjct: 36 LSTFIGVAFILYALFFSSIQRWKQNSRFRTLFWNSLWGGFLFWIISVAAFFAYIQMSINP 95
Query: 61 Q-WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS 119
+ I++LG+G + +PS +R+ + + + II++
Sbjct: 96 TVPARPAAAILVLGSGIN--------QGQPSPILKNRLDTAAKYAERYPKT----LIIMT 143
Query: 120 GGDPQKHGLAES 131
GG +E+
Sbjct: 144 GGRNFWERQSEA 155
>gi|87123201|ref|ZP_01079052.1| GDP-mannose pyrophosphorylase [Synechococcus sp. RS9917]
gi|86168921|gb|EAQ70177.1| GDP-mannose pyrophosphorylase [Synechococcus sp. RS9917]
Length = 485
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 12/132 (9%)
Query: 68 IIVLLGNGTTIIP---TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+I+ G GT + P + P S + + ++I D +
Sbjct: 8 VILCGGTGTRLWPLSRASYPKQYWPLGGSGDETLLQQTQQRLEGLSGLAAPLLICNDDHR 67
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKNIILVSSAY 183
+ ++ + GVE I LE +T A +++ ++LV +A
Sbjct: 68 -------FIVAEQMRQIGVEPGAILLEPMGRNTAP-AVAVAALQATARGDDPLLLVLAAD 119
Query: 184 HLKRSQLYFQHF 195
H+ R F+
Sbjct: 120 HVIRDAALFRAA 131
>gi|255079436|ref|XP_002503298.1| predicted protein [Micromonas sp. RCC299]
gi|226518564|gb|ACO64556.1| predicted protein [Micromonas sp. RCC299]
Length = 291
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
LE S++T ++A FS K I++V++ L+ +++Y
Sbjct: 224 VLEEASMNTRESAIFSFEEAKKRGWSKIVIVANDDQLRTAKVYA 267
>gi|145356240|ref|XP_001422342.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582583|gb|ABP00659.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 263
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 53/149 (35%), Gaps = 20/149 (13%)
Query: 70 VLLGNGTTIIPTIPAI----RIEPSFQSYSR-IFETMRLYKSCKQHSMHCTIIISGGDPQ 124
V LG+ P R + S + Y R + E + + + H ++ SGG
Sbjct: 28 VYLGSDFAKAAEDPGDWALERDQTSSEGYVRSLVEHIEIGVREAARNPHAVLVFSGGKSI 87
Query: 125 KHG--LAESIVYNNKLLESG---VE---RDDIKLETQSLDTFQNAQFSS---SMIKNMQG 173
G + + Y + V+ E + D F++A FS +
Sbjct: 88 DAGAVMTRASSYWQVARANDWFGVDAKVESRTFTEEHANDGFEHALFSVCRFFQLARKFP 147
Query: 174 KNIILVSSAYHLKRSQLYFQHFGINTKAS 202
I +V +H++R++ F+ ++
Sbjct: 148 SKITVV--GFHVERAR--FEKLHLDAMGY 172
>gi|332880221|ref|ZP_08447902.1| putative mannose-1-phosphate
guanylyltransferase/mannose-6-phosphate isomerase
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332681870|gb|EGJ54786.1| putative mannose-1-phosphate
guanylyltransferase/mannose-6-phosphate isomerase
[Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 353
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Query: 123 PQKHGLAESIVYNNKLLES--GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
P+ + S Y + + E + +I E +T + S IK + K ++V+
Sbjct: 55 PENIWVVTSEAYADIVREQLPEIPESNILKEPCRRNTAPCIAYVSWRIKKLNPKANVVVT 114
Query: 181 SAYHLKRSQLYFQH 194
+ H+ F+
Sbjct: 115 PSDHIVMDVAEFER 128
>gi|330995750|ref|ZP_08319647.1| putative mannose-1-phosphate
guanylyltransferase/mannose-6-phosphate isomerase
[Paraprevotella xylaniphila YIT 11841]
gi|329574480|gb|EGG56045.1| putative mannose-1-phosphate
guanylyltransferase/mannose-6-phosphate isomerase
[Paraprevotella xylaniphila YIT 11841]
Length = 353
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Query: 123 PQKHGLAESIVYNNKLLES--GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
P+ + S Y + + E + +I E +T + S IK + K ++V+
Sbjct: 55 PENIWVVTSEAYADIVREQLPEIPESNILKEPCRRNTAPCIAYVSWRIKKLNPKANVVVT 114
Query: 181 SAYHLKRSQLYFQH 194
+ H+ F+
Sbjct: 115 PSDHIVMDVAEFER 128
>gi|298705182|emb|CBJ28613.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 461
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 12/109 (11%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGG-------D 122
V+ G G P PS+ + R+ + + + + + +G
Sbjct: 87 VVPGGG----PGSVKDAGYPSWTA-QRVAKALERFDMKYGDTTAFLALGAGSMNAPSARG 141
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
H + ES +L+ GV I + S DT NA F+ ++ M
Sbjct: 142 GNGHVIFESARIAEELVRGGVPPGSIIADFASWDTVGNAWFARMAVEAM 190
>gi|123966603|ref|YP_001011684.1| mannose-1-phosphate guanylyltransferase [Prochlorococcus marinus
str. MIT 9515]
gi|123200969|gb|ABM72577.1| Mannose-1-phosphate guanylyltransferase [Prochlorococcus marinus
str. MIT 9515]
Length = 480
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 135 NNKLLESGVERDDIKLETQSLDT-FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
++ + V+ I LE + +T A + ++ Q ++L+ SA H+ R F
Sbjct: 71 AEQMRDINVKPKAIILENEGKNTAPAIALGAIKALEEEQEDPLLLILSADHIIRDLNVFS 130
Query: 194 H 194
Sbjct: 131 K 131
>gi|152989689|ref|YP_001348590.1| hypothetical protein PSPA7_3230 [Pseudomonas aeruginosa PA7]
gi|150964847|gb|ABR86872.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 212
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 28/76 (36%), Gaps = 6/76 (7%)
Query: 109 QHSMHCTIIISGGDPQKHG----LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFS 164
+ + ++ +G E+ ++ GV + +E ++ + +N F+
Sbjct: 46 ERGLAERLLFTGNTGHWTRHLWVEPEAELFARHARARGVSDSLVVIEPRATNFAENIAFA 105
Query: 165 SSMIKNMQGKNIILVS 180
+ ++ + V+
Sbjct: 106 RELFPDL--RRATFVT 119
>gi|85058944|ref|YP_454646.1| hypothetical protein SG0966 [Sodalis glossinidius str. 'morsitans']
gi|84779464|dbj|BAE74241.1| vancomycin resistance protein [Sodalis glossinidius str.
'morsitans']
Length = 262
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 63/204 (30%), Gaps = 31/204 (15%)
Query: 15 LLCQSIRKIFFMSCFMLLFSF-----IGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNII 69
+L + I + ++ ++L + I W P I Y P +
Sbjct: 1 MLKRLIFTLLIIAGVLVLTAVSLDRWISWKTAPFI--------YDDLTALPHRQVG---- 48
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + RI + Y S K +++SG +
Sbjct: 49 VVLGTAKYYRTGVINQYY------LYRIQGALNAYNSGKVSY----LLLSGDNA-LQSYN 97
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E + L+ G+ D L+ T + + + + +++ +H +R+
Sbjct: 98 EPVTMRRDLIAQGMPAADTVLDFAGFRTLDSIIRTRKVFD---TNDFTIITQRFHCERAL 154
Query: 190 LYFQHFGINTKASCSDYLNAYYSI 213
+ GI + S+
Sbjct: 155 FIALNMGIQAQCYAVPSPKNMLSV 178
>gi|33864217|ref|NP_895777.1| GDP-mannose pyrophosphorylase [Prochlorococcus marinus str. MIT
9313]
gi|33635801|emb|CAE22126.1| GDP-mannose pyrophosphorylase [Prochlorococcus marinus str. MIT
9313]
Length = 484
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKNIILVSSAYHLKRSQLY 191
+ ++ + VE + I LE +T A +++ I+LV +A H+ R+
Sbjct: 70 IVAEQMRQIDVEPNAILLEPMGRNTAP-AVTVAALQATERGEDPILLVLAADHVIRNATQ 128
Query: 192 FQH 194
F+H
Sbjct: 129 FRH 131
>gi|322710407|gb|EFZ01982.1| DUF218 domain protein [Metarhizium anisopliae ARSEF 23]
Length = 247
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 59/149 (39%), Gaps = 26/149 (17%)
Query: 62 WKKDGNIIVL------LGN---GTTIIPTIPAI-RIEPSFQSYSRIFETMRLYKSCKQHS 111
+ +I++ LG G + A + + + I +R S + H+
Sbjct: 1 MPRPTKLIIVCCHGIWLGGPSKGHNEAEWLLADFQHGETPTFIAHIKAGLRCLASDRGHA 60
Query: 112 MHCTIIISGGDP--QKHGLAESIVYNNKLLESG--------VERDDIKLETQSLDTFQNA 161
S P ++ L+E+ Y N +++ V D+ LE ++LD++ N
Sbjct: 61 QLTP---SCSAPTRRETTLSEAQSYANLAIQNACFGLLDPPVTAADMMLEERALDSYHNV 117
Query: 162 QFSSSMIK---NMQGKNIILVSSAYHLKR 187
FS S+ +++++VS A+ R
Sbjct: 118 LFSLSLFYARFQRWPRHVVVVSHAFKRPR 146
>gi|189190850|ref|XP_001931764.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973370|gb|EDU40869.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 334
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 19/98 (19%)
Query: 109 QHSMHCTIIISGGDPQKHGL--AESIVYNNKLLESGVERDD--------------IKLET 152
+H ++ SGG ++ E+ Y + L + I LE
Sbjct: 130 EHPTSSLLVFSGGATKRSESLKTEARSYYHAALAEELASGHMGGGPAHRLYNKRYILLEE 189
Query: 153 QSLDTFQNAQFSSSMIKNMQG---KNIILVSSAYHLKR 187
Q+ D+FQN FS + + G K I +++ A+ KR
Sbjct: 190 QATDSFQNLLFSILLFRKATGRYPKQIRVITHAFKAKR 227
>gi|325110724|ref|YP_004271792.1| hypothetical protein Plabr_4196 [Planctomyces brasiliensis DSM
5305]
gi|324970992|gb|ADY61770.1| protein of unknown function DUF218 [Planctomyces brasiliensis DSM
5305]
Length = 218
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 37/132 (28%), Gaps = 18/132 (13%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISG 120
K + + +LG G P + A + F RI
Sbjct: 52 PLNKRVDFVFILGGGANDRPIVAAEIYKAGF--ADRILIA---------SPEFLP----- 95
Query: 121 GDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL-DTFQNAQFSSSMIKNMQGKNIILV 179
D E+ + + L V + ++ T T + + +V
Sbjct: 96 -DTPHEARTEADLVRSMLTWENVPLEALEQLTLPEPSTRGEILALKEYMAEHALQQGAIV 154
Query: 180 SSAYHLKRSQLY 191
+ YH +R +L
Sbjct: 155 THNYHTRRVRLL 166
>gi|258576929|ref|XP_002542646.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902912|gb|EEP77313.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 895
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 17/109 (15%)
Query: 64 KDGNIIVLLGN-------GTTIIPTIPAIRIEPSFQSYSRI-----FETMRLYKSCKQHS 111
DG ++L G G P + A+ +PS R+ R+Y S
Sbjct: 683 PDGTFLILNGAKKGVAGFGLADDPNLNAVLYDPSKPVNHRMSVMANTTIARMYHSEAILI 742
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
+++SG DPQ +E + + + T +N
Sbjct: 743 PDGRVLVSGSDPQDDDYP-----QEYRVEVFIPPYLLSGAPRPTFTIEN 786
>gi|145629327|ref|ZP_01785126.1| acetyl-CoA carboxylase subunit beta [Haemophilus influenzae
22.1-21]
gi|144978830|gb|EDJ88553.1| acetyl-CoA carboxylase subunit beta [Haemophilus influenzae
22.1-21]
Length = 226
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 67/190 (35%), Gaps = 15/190 (7%)
Query: 12 YWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS-PQWKKDGNIIV 70
+ +L + F LL++ I+ ++ + + F + + + +
Sbjct: 2 FTAMLVKKFSPKFTALFRALLYAIFALIILCLLVDRGVSFYVRDKIFTNIDELPFRPYAL 61
Query: 71 LLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAE 130
+LG + P + + SR+ T L + K + +++SG D + E
Sbjct: 62 VLGTSKYTVSGKPNVYYD------SRLTTTKSLIEQQKVNY----LLLSG-DNRTLQYNE 110
Query: 131 SIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQL 190
L + GV + + T + + + + + +VS +H +R+ L
Sbjct: 111 PRAMFRDLRKMGVPETLMFRDFAGFRTLDSVIRADKIFQ---VQAFTIVSQKFHCERALL 167
Query: 191 YFQHFGINTK 200
+ I+
Sbjct: 168 IAKAHNIDAI 177
>gi|78211681|ref|YP_380460.1| mannose-1-phosphate guanylyltransferase (GDP) [Synechococcus sp.
CC9605]
gi|78196140|gb|ABB33905.1| Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Synechococcus sp. CC9605]
Length = 486
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKNIILVSSAYHLKRSQLY 191
+ ++ + GVE + I LE +T A +++ ++LV +A HL R
Sbjct: 70 IVAEQMRQIGVEPNAILLEPMGRNTAP-AVTVAALQATANGEDPLLLVLAADHLIRDGAQ 128
Query: 192 FQHF 195
F+
Sbjct: 129 FRQA 132
>gi|317968418|ref|ZP_07969808.1| mannose-1-phosphate guanylyltransferase [Synechococcus sp. CB0205]
Length = 491
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 25/125 (20%)
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ ++ + GV+ I LE +T ++ ++LV +A H+ R F
Sbjct: 71 IVAEQMRQIGVDPSAILLEPAGRNTAPAVAIAALQAMAAGDDPLLLVLAADHVIREGAAF 130
Query: 193 QH----------------FGINTKASCSDY--------LNAYYSIIPLSANFYLTELALK 228
+ FGI A + Y L + +P++ + A
Sbjct: 131 RQTVQAGVAAAEAGQLVTFGIVPTAPETGYGYIEAAQPLGDTGTPVPIARFVEKPDRATA 190
Query: 229 E-YIG 232
E ++G
Sbjct: 191 EGFLG 195
>gi|254557901|ref|YP_003064318.1| hypothetical protein JDM1_2735 [Lactobacillus plantarum JDM1]
gi|254046828|gb|ACT63621.1| conserved hypothetical protein [Lactobacillus plantarum JDM1]
Length = 231
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 14/108 (12%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP------------QKHGLAESIVYNNKLLESGVE 144
+ T Q +II+GG K +E+ + L+
Sbjct: 34 LPATATAAGQLAQDYQLPLLIIAGGIGHATKYLRQNLNLPKSQASEAELMAT-LVRKTGY 92
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ I+L+ S +T NA + + + ++++LV +R+ L F
Sbjct: 93 QGSIRLDKTSTNTGSNATHARA-LAPTDWRHVLLVQDPLLARRTTLTF 139
>gi|322709010|gb|EFZ00587.1| putative glyoxal oxidase precursor [Metarhizium anisopliae ARSEF
23]
Length = 1130
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 12/79 (15%)
Query: 64 KDGNIIVLLGN-------GTTIIPTIPAIRIEPSFQSYSRIF-----ETMRLYKSCKQHS 111
DG +++ G G P + A+ +P+ SRI RLY S
Sbjct: 918 PDGTYMIMNGAHHGVAGFGLAKDPNLNALLYDPTKPLGSRITVMANTTVARLYHSEAITL 977
Query: 112 MHCTIIISGGDPQKHGLAE 130
+ +++SG DPQ E
Sbjct: 978 LDGRVLVSGSDPQDGVNPE 996
>gi|322695977|gb|EFY87776.1| putative glyoxal oxidase precursor [Metarhizium acridum CQMa 102]
Length = 1030
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 12/79 (15%)
Query: 64 KDGNIIVLLGN-------GTTIIPTIPAIRIEPSFQSYSRIF-----ETMRLYKSCKQHS 111
DG +++ G G P + A+ +P+ SRI RLY S
Sbjct: 818 PDGTYMIMNGAHHGVAGFGLAKDPNLNALLYDPTKPLGSRITVMANTTVARLYHSEAITL 877
Query: 112 MHCTIIISGGDPQKHGLAE 130
+ +++SG DPQ E
Sbjct: 878 LDGRVLVSGSDPQDGVNPE 896
>gi|306836970|ref|ZP_07469920.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
gi|304567153|gb|EFM42768.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
Length = 481
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK--IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+L + FLIV+ W L Q+ R+ F++ +LLF I W + +
Sbjct: 246 LLAAVFFLIVAQWWLWRQTRRRFNRGFLTATVLLFLAIFWVALSNLATWSTGHQGFETAS 305
Query: 59 SP 60
P
Sbjct: 306 RP 307
>gi|300769323|ref|ZP_07079210.1| conserved hypothetical protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|300493097|gb|EFK28278.1| conserved hypothetical protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 231
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 14/108 (12%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP------------QKHGLAESIVYNNKLLESGVE 144
+ T Q +II+GG K +E+ + L+
Sbjct: 34 LPATATAAGQLAQDYQLPLLIIAGGIGHATKYLRQNLNLPKSQASEAELMAT-LVRKTGY 92
Query: 145 RDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ I+L+ S +T NA + + + ++++LV +R+ L F
Sbjct: 93 QGSIRLDKTSTNTGSNATHARA-LAPTDWRHVLLVQDPLLARRTTLTF 139
>gi|145594751|ref|YP_001159048.1| hypothetical protein Strop_2219 [Salinispora tropica CNB-440]
gi|145304088|gb|ABP54670.1| hypothetical protein Strop_2219 [Salinispora tropica CNB-440]
Length = 244
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 41/122 (33%), Gaps = 30/122 (24%)
Query: 95 SRIFETMRLYKS----CKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLE-----SGVER 145
R+ + L + H + C I++ GG Q+ G++E L R
Sbjct: 30 DRLGDAATLTREVLTLGHDHELSC-IVMGGGFSQRDGISEGEYTKRFFLANLTRLDEFPR 88
Query: 146 --------------------DDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
DI + ++ +T + ++ + + ++ V++A H
Sbjct: 89 LRPLLARLSGPQRAAFSQAVRDIIIMPRAGNTVSELETAAGIFAAHGVQRVLQVAAASHA 148
Query: 186 KR 187
R
Sbjct: 149 PR 150
>gi|182416855|ref|ZP_02948241.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237668114|ref|ZP_04528098.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182379317|gb|EDT76816.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237656462|gb|EEP54018.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 202
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 129 AESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ--GKNIILVSSAYHLK 186
E + + +GV + + E + T QNA S + + K I+ ++H K
Sbjct: 82 TEFEFLKDVAIINGVPEEVVLKEDCATWTKQNAFNSKRVTDKLGLNVKKAIICCKSFHAK 141
Query: 187 RSQLYF 192
R +++
Sbjct: 142 RCLMFY 147
>gi|187476600|ref|YP_784623.1| lipopolysaccharide biosynthesis protein [Bordetella avium 197N]
gi|115421186|emb|CAJ47686.1| putative lipopolysaccharide biosynthesis protein [Bordetella avium
197N]
Length = 203
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 55/159 (34%), Gaps = 9/159 (5%)
Query: 70 VLLG------NGTTIIPTIPAIRIEPSFQSYSRIFET-MRLYKSCKQHSMHCTIIISGGD 122
VLLG G + P A + + T +R + I+ GG
Sbjct: 21 VLLGWSDREDAGHRLGPLDQASAAIVFYTPDEAVRATYVRRAHDLYRAGQVGMIVCVGGA 80
Query: 123 PQKHGLAESIVYNNKLLESGVERDDIKLETQ-SLDTFQNAQFSSSMIKNMQGKNIILVSS 181
S V ++L SGV + + S D+ N Q + +++ ++ +LV+
Sbjct: 81 RPGRNYFGSAVMADELERSGVPAGALHCGDRVSDDSRSNIQAAWAVLNARDFQDAVLVAD 140
Query: 182 AYHLKRSQLYFQHF-GINTKASCSDYLNAYYSIIPLSAN 219
H R + G + + + + ++ + +
Sbjct: 141 RLHGFRLRYLAHMLTGQSPRWAAAPDYLSWEQALLRAYW 179
>gi|302817600|ref|XP_002990475.1| hypothetical protein SELMODRAFT_131690 [Selaginella moellendorffii]
gi|300141643|gb|EFJ08352.1| hypothetical protein SELMODRAFT_131690 [Selaginella moellendorffii]
Length = 240
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 15/90 (16%)
Query: 116 IIISGGDPQKH--GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS---SMIKN 170
++ SGG+ +K +E+ Y + + RD E + D+F+N FS +
Sbjct: 69 LLFSGGETRKEAGPRSEAQSYWSVADANDCVRDRAVTEEYARDSFENLLFSICRFRELTG 128
Query: 171 MQGKNIILVSSAYH--------LKRSQLYF 192
+NI +VS YH L RS L F
Sbjct: 129 QYPQNITVVS--YHFKQHRFVALHRSALKF 156
>gi|124024291|ref|YP_001018598.1| mannose-1-phosphate guanylyltransferase [Prochlorococcus marinus
str. MIT 9303]
gi|123964577|gb|ABM79333.1| Mannose-1-phosphate guanylyltransferase [Prochlorococcus marinus
str. MIT 9303]
Length = 484
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKNIILVSSAYHLKRSQLY 191
+ ++ + VE + I LE +T A +++ ++LV +A H+ R
Sbjct: 70 IVAEQMRQIDVEPNAILLEPMGRNTAP-AVTVAALQATERGEDPLLLVLAADHVIRDATQ 128
Query: 192 FQH 194
F+H
Sbjct: 129 FRH 131
>gi|103488367|ref|YP_617928.1| hypothetical protein Sala_2890 [Sphingopyxis alaskensis RB2256]
gi|98978444|gb|ABF54595.1| protein of unknown function DUF218 [Sphingopyxis alaskensis RB2256]
Length = 176
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 31/153 (20%)
Query: 38 WGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRI 97
+ +L F+ PL +P K D ++V G G RI
Sbjct: 7 SLLFLVWVLGFAWFALLLPLPAPPQKTDAIVVVTGGPG--------------------RI 46
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN--KLLESGVERDDIKLETQSL 155
+ ++ ++ISG + + Y L + + +
Sbjct: 47 DRALERLEAGDAK----RLLISGVAREVKPRELAAEYGRPVALFDCCIALGF-----DAE 97
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRS 188
DT NA ++ K + K+I LV++ +H++R+
Sbjct: 98 DTRSNATEVAAWAKRRKYKSIRLVTTDWHMRRA 130
>gi|146323502|ref|XP_754196.2| DUF218 domain protein [Aspergillus fumigatus Af293]
gi|129558258|gb|EAL92158.2| DUF218 domain protein [Aspergillus fumigatus Af293]
gi|159127214|gb|EDP52329.1| conserved hypothetical protein [Aspergillus fumigatus A1163]
Length = 265
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 22/127 (17%)
Query: 112 MHCTIIISGG--DPQKHGLAESIVYNNKLLESG-------VERDDIKLETQSLDTFQNAQ 162
H ++ SGG + LAE Y+N ++ + D + ET + D++QN
Sbjct: 65 PHGLLVFSGGPTKKDRTDLAEGTSYHNLAKDNDYYSYSSRIHPDRVITETNATDSYQNVL 124
Query: 163 FSSSMIKNMQ-----GKNIILVSSAYHLKRSQLY-FQHFGINT-----KASCSDYLNAYY 211
FS +++ + I +V+ + +R F G+ +N
Sbjct: 125 FS--LLRFRSYVGAYPRKITVVTHEFKRQRFMECHFPALGLRAGGQASCPGAVVGINPPE 182
Query: 212 SIIPLSA 218
+ PL++
Sbjct: 183 EVTPLAS 189
>gi|55823567|ref|YP_142008.1| hypothetical protein str1664 [Streptococcus thermophilus CNRZ1066]
gi|55739552|gb|AAV63193.1| hypothetical protein str1664 [Streptococcus thermophilus CNRZ1066]
Length = 228
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAY 183
ETQS T QN QFS +I K I V++ Y
Sbjct: 187 WAETQSKTTSQNMQFSKQLIAQGPAKNPRTIFVTNNY 223
>gi|33864684|ref|NP_896243.1| GDP-mannose pyrophosphorylase [Synechococcus sp. WH 8102]
gi|33632207|emb|CAE06663.1| GDP-mannose pyrophosphorylase [Synechococcus sp. WH 8102]
Length = 489
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHLKRSQLY 191
+ ++ + GVE + I LE +T A +++ G ++LV +A HL R
Sbjct: 73 IVAEQMRQIGVEPNAILLEPMGRNTAP-AVTVAALQATAGGQDPLLLVLAADHLIRDAKQ 131
Query: 192 FQHF 195
F+
Sbjct: 132 FRQA 135
>gi|55821640|ref|YP_140082.1| hypothetical protein stu1664 [Streptococcus thermophilus LMG 18311]
gi|55737625|gb|AAV61267.1| hypothetical, predicted membrane protein (TMS5) [Streptococcus
thermophilus LMG 18311]
Length = 228
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 149 KLETQSLDTFQNAQFSSSMIKNMQGK--NIILVSSAY 183
ETQS TFQN QFS +I K I V++ Y
Sbjct: 187 WAETQSKTTFQNMQFSKQLIAQGPAKNPRTIFVTNKY 223
>gi|56478103|ref|YP_159692.1| putative mannose-1-phosphate guanylyltransferase [Aromatoleum
aromaticum EbN1]
gi|56314146|emb|CAI08791.1| putative mannose-1-phosphate guanylyltransferase [Aromatoleum
aromaticum EbN1]
Length = 551
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
++ +G + I LE +T ++ ++ ++LV A H+ R + F
Sbjct: 141 AEQMRAAGCPTNHILLEPVGRNTAPALTLAALTVRRDSDDGVLLVMPADHVIRDREAFHR 200
Query: 195 F---GINTKASCS 204
GI + +
Sbjct: 201 AIDIGIEAALAGA 213
>gi|317496343|ref|ZP_07954697.1| deoR family bacterial regulatory protein [Gemella moribillum M424]
gi|316913479|gb|EFV34971.1| deoR family bacterial regulatory protein [Gemella moribillum M424]
Length = 251
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 8/61 (13%)
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA-YHLK 186
L E L ++ V+ T++ MI ++ + I +V+++ YHL
Sbjct: 76 LPEKKEVAKYLCKNVVQSGQTIYLDAGTSTYE-------MIDYLRDRKITVVTNSTYHLP 128
Query: 187 R 187
R
Sbjct: 129 R 129
>gi|254369443|ref|ZP_04985455.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|254370530|ref|ZP_04986535.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|151568773|gb|EDN34427.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|157122393|gb|EDO66533.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 80
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Query: 6 IFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKD 65
+FLI + +F+ +++ IG G++ TIL L+ + +
Sbjct: 10 LFLIALIITCIFSKGYLRYFIVALTIVYYLIGNGVLGTILALPLKSE----STDIKACAN 65
Query: 66 GNIIVLLGNGTTI 78
I+LLG G
Sbjct: 66 TKGIILLGAGINN 78
>gi|307326233|ref|ZP_07605430.1| conserved hypothetical protein [Streptomyces violaceusniger Tu
4113]
gi|306888176|gb|EFN19165.1| conserved hypothetical protein [Streptomyces violaceusniger Tu
4113]
Length = 260
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 30 MLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIE 88
+LL F G G++ LL L Y RP L P G ++++LG + P R
Sbjct: 7 VLLLLFTGVGLLHISLLTDLYLRYVRPGLRPALIASGVLLIVLGAVSAARDGFPFNRPR 65
>gi|15602732|ref|NP_245804.1| SanA [Pasteurella multocida subsp. multocida str. Pm70]
gi|12721178|gb|AAK02951.1| SanA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 238
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 53/142 (37%), Gaps = 14/142 (9%)
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA 129
V+LG + ++R+ ++ + K +++SG D + +
Sbjct: 62 VVLGTSKYFEKNT------LNLFYHNRLLAAHEVFSARKIDY----LLLSG-DNRTNQYN 110
Query: 130 ESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQ 189
E L + G+ + + ++ T + + + K + +++ +H +R+
Sbjct: 111 EPRNMFKDLRKMGIAAEFMYMDFAGFRTLDSVIRAQQVFKAH---SFTIITQKFHCERAL 167
Query: 190 LYFQHFGINTKASCSDYLNAYY 211
++ I+ +DY +Y
Sbjct: 168 FIAKYHNIDAICFAADYPQGHY 189
>gi|254521618|ref|ZP_05133673.1| ABC-type multidrug transporter, ATPase component [Stenotrophomonas
sp. SKA14]
gi|219719209|gb|EED37734.1| ABC-type multidrug transporter, ATPase component [Stenotrophomonas
sp. SKA14]
Length = 307
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ AI+ P Q+ RI ++ Y+ + +SGG Q+ LA ++V+ +LL
Sbjct: 97 LAAIQDLPRAQARQRIDTLLQQYR-LQDRQPQLAGTLSGGQKQRLALAGAVVHAPELLFL 155
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E++ D ++ ++ + +LVS+ Y
Sbjct: 156 DEPTSAVDPESR-RDFWE------ALFELADAGTTVLVSTHYM 191
>gi|168702139|ref|ZP_02734416.1| mannose-1-phosphate guanylyltransferase [Gemmata obscuriglobus UQM
2246]
Length = 362
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 17/135 (12%)
Query: 69 IVLLGNGTTIIPTIPAIRI-EPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
I+ G GT P + R + S +R + + Q T +++G
Sbjct: 6 IMAGGGGTRFWPRSRSKRPKQFLTFSGNRTLLQSTVDRVSAQIPPERTWVVTGAQYADET 65
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL-- 185
+L E RD I E + DT +++I I V A H+
Sbjct: 66 -------AAQLPEL--PRDHIIGEPEGRDTAPCVGLGAAIIAKADPNATIAVMPADHVIE 116
Query: 186 -----KRSQLYFQHF 195
+R+ + F
Sbjct: 117 PEQEFRRALHAAEQF 131
>gi|190573589|ref|YP_001971434.1| putative ABC transporter ATP-binding protein [Stenotrophomonas
maltophilia K279a]
gi|190011511|emb|CAQ45129.1| putative ABC transporter ATP-binding component [Stenotrophomonas
maltophilia K279a]
Length = 307
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ AI+ P Q+ R+ E ++ Y+ +SGG Q+ LA ++V+ +LL
Sbjct: 97 LAAIQDLPRTQARQRVDELLQQYR-LLDRQPQLAGTLSGGQKQRLALAGAVVHAPELLFL 155
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E++ D ++ ++ + +LVS+ Y
Sbjct: 156 DEPTSAVDPESR-RDFWE------ALFELADAGTTVLVSTHYM 191
>gi|319788034|ref|YP_004147509.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Pseudoxanthomonas suwonensis 11-1]
gi|317466546|gb|ADV28278.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Pseudoxanthomonas suwonensis 11-1]
Length = 467
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 51/150 (34%), Gaps = 11/150 (7%)
Query: 70 VLL--GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
VLL G+GT + P + + + ++ + ++++
Sbjct: 7 VLLSGGSGTRLWPLSRESYPKQFLPLHGELTMLQETWQRVAPLATRAPLVVA-------N 59
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQG-KNIILVSSAYHLK 186
+ V +L + G E I LE +T A +++ G ++LV + H+
Sbjct: 60 ESHRFVAAEQLHQVGAEPQAILLEPAGRNTAP-AIAVAALEAGAGGEDPVLLVLPSDHVV 118
Query: 187 RSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
R F+ + + I+P
Sbjct: 119 RDAEAFRRAVALALPAAEAGRLVTFGIVPT 148
>gi|146421740|ref|XP_001486814.1| hypothetical protein PGUG_00191 [Meyerozyma guilliermondii ATCC
6260]
Length = 282
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 117 IISGGDPQKH--GLAESIVYNNKLLESGVER---DDIKLETQSLDTFQNAQF 163
I+SGG +K ++E+ Y + + ++ + + LE + D+F+N F
Sbjct: 89 IVSGGQTKKECGPISEAQSYYSLATQLCNDKNIVERVHLEEYARDSFENVLF 140
>gi|291280375|ref|YP_003497210.1| phosphomethylpyrimidine kinase [Deferribacter desulfuricans SSM1]
gi|290755077|dbj|BAI81454.1| phosphomethylpyrimidine kinase [Deferribacter desulfuricans SSM1]
Length = 262
Score = 37.1 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 119 SGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
S G P G AE IV L+ ++ I E + + T ++ + ++ +I N +N++L
Sbjct: 112 SSGTPLFEGNAEKIVNGAYLITPNLDEASILAEVK-IQTIEDMEQAAKLIYNQGAQNVLL 170
>gi|89074000|ref|ZP_01160506.1| hypothetical protein SKA34_15560 [Photobacterium sp. SKA34]
gi|89050328|gb|EAR55832.1| hypothetical protein SKA34_15560 [Photobacterium sp. SKA34]
Length = 76
Score = 36.8 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQ 54
+L+ + ++ W + + F+ LF+ + + + T LL+ L+ Y
Sbjct: 18 LLIIGVIGLLVLWFTRKKKLASGIIAFSFLGLFA-VSFQPVSTSLLRPLEQQYP 70
>gi|119490500|ref|XP_001263036.1| hypothetical protein NFIA_063000 [Neosartorya fischeri NRRL 181]
gi|119411196|gb|EAW21139.1| hypothetical protein NFIA_063000 [Neosartorya fischeri NRRL 181]
Length = 265
Score = 36.8 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 17/104 (16%)
Query: 116 IIISGG--DPQKHGLAESIVYNNKLLESG-------VERDDIKLETQSLDTFQNAQFSSS 166
++ SGG + LAE YNN ++ + D + ET + D++QN FS
Sbjct: 69 LVFSGGPTKKDRTDLAEGTSYNNLAKDNDYFSYSSRIHPDRVIAETNATDSYQNVLFS-- 126
Query: 167 MIKNMQ-----GKNIILVSSAYHLKRSQLY-FQHFGINTKASCS 204
+++ I +V+ + +R F G+ T+ S
Sbjct: 127 LLRFRSYVGAYPTKITVVTHEFKRQRFMECHFPALGLRTRGQAS 170
>gi|227502019|ref|ZP_03932068.1| secreted protein [Corynebacterium accolens ATCC 49725]
gi|227077303|gb|EEI15266.1| secreted protein [Corynebacterium accolens ATCC 49725]
Length = 481
Score = 36.8 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRK--IFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLL 58
+L + FLIV+ W L Q+ R+ F++ +LLF + W + +
Sbjct: 246 LLAAVFFLIVAQWWLWRQTRRRFNRGFLTATVLLFLAVFWVALSNLATWSTGHQGFETAS 305
Query: 59 SP 60
P
Sbjct: 306 RP 307
>gi|110004295|emb|CAK98633.1| putative phosphate abc transporter atp binding component protein
[Spiroplasma citri]
Length = 269
Score = 36.8 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 35/95 (36%), Gaps = 9/95 (9%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ L+ K + +SGG Q+ +A +I K+L L+ S
Sbjct: 146 LKRAALWDEVKDNLRDSAFALSGGQQQRLCIARAIAMKPKILLMDEPTSA--LDPISTSK 203
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ + + + I+LV+ H++++
Sbjct: 204 IEEL-----IAQLKKDFTIVLVTH--HMQQAARVA 231
>gi|405877|gb|AAA60509.1| yeiF [Escherichia coli]
gi|744182|prf||2014253AR yeiF gene
Length = 152
Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 8/92 (8%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI + Y S K + +++SG + E + L+ +GV+ DI L+
Sbjct: 69 RIQGAINAYNSGKVNY----LLLSGDNA-LQSYNEPMTMRKDLIAAGVDPSDIVLDYAGF 123
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
T + + + + I+++ +H +R
Sbjct: 124 RTLDSIVRTRKVFD---TNDFIIITQRFHCER 152
>gi|195546618|ref|YP_002117646.1| p088 [Rhizobium phage 16-3]
gi|102642579|gb|ABF71360.1| p088 [Rhizobium phage 16-3]
Length = 576
Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 11/90 (12%)
Query: 102 RLYKSCKQHSMHCTIIIS-GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQ------S 154
RL + I + GG+ +AE+ +++E + D I E + S
Sbjct: 208 RLTSQKTAAKIDLKGIGTRGGEYIPGQVAEA---AERIIEEAIAEDMIASEGRRAGLFFS 264
Query: 155 LDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+NA+ + I+ +L S H
Sbjct: 265 TS-KENARHVAEAIRRHGRTCAVLTSDNAH 293
>gi|170701730|ref|ZP_02892668.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Burkholderia ambifaria IOP40-10]
gi|170133365|gb|EDT01755.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Burkholderia ambifaria IOP40-10]
Length = 526
Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 57/153 (37%), Gaps = 21/153 (13%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIP---TIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
RP+ P+ + +I+ G+GT + P ++ + S + T R S
Sbjct: 6 RPVPEPELPRILPVILAGGSGTRLWPLSREQYPKQLIELTSNESPLSATARRLNGIANAS 65
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS------ 165
+ T+++ G+ Q ++ + V I LE + +T ++
Sbjct: 66 LGDTLLLVCGE-QHRIMSAAQVLGRAA------PARILLEPAARNTAPALTLAALDASVL 118
Query: 166 ---SMIKNMQGKNIILVSSAYH--LKRSQLYFQ 193
++ M ++I A+H + R+ Y Q
Sbjct: 119 ADDPILAVMPADHVIGDVGAFHEAIGRAARYAQ 151
>gi|330930303|ref|XP_003302978.1| hypothetical protein PTT_14982 [Pyrenophora teres f. teres 0-1]
gi|311321325|gb|EFQ88913.1| hypothetical protein PTT_14982 [Pyrenophora teres f. teres 0-1]
Length = 310
Score = 36.8 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 19/98 (19%)
Query: 109 QHSMHCTIIISGGDPQKHGL--AESIVYNNKLLESGVERDD--------------IKLET 152
+H +++SGG ++ E+ Y + L + I LE
Sbjct: 130 EHPTSSLLVLSGGATKRSESLKTEARSYYHAALAEELASGHMGGGPAHRLYNKRYILLEE 189
Query: 153 QSLDTFQNAQFSSSMIKNMQG---KNIILVSSAYHLKR 187
Q+ D+FQN FS + + G K I +++ A+ KR
Sbjct: 190 QATDSFQNLLFSILLFRKATGRYPKQIRVITHAFKAKR 227
>gi|212691710|ref|ZP_03299838.1| hypothetical protein BACDOR_01205 [Bacteroides dorei DSM 17855]
gi|237708691|ref|ZP_04539172.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|237724031|ref|ZP_04554512.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|265755365|ref|ZP_06090135.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|294778206|ref|ZP_06743633.1| putative lipoprotein [Bacteroides vulgatus PC510]
gi|212665734|gb|EEB26306.1| hypothetical protein BACDOR_01205 [Bacteroides dorei DSM 17855]
gi|229437491|gb|EEO47568.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
gi|229457391|gb|EEO63112.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263234507|gb|EEZ20097.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|294447943|gb|EFG16516.1| putative lipoprotein [Bacteroides vulgatus PC510]
Length = 661
Score = 36.8 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 31/224 (13%), Positives = 62/224 (27%), Gaps = 43/224 (19%)
Query: 32 LFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIV--LLGNGTTIIPTIPAIRIEP 89
LF+ G I T L +Q K I+ L ++ P +
Sbjct: 148 LFTKFGDLPIVTTALPDIQGELVEASKRQPRHKVARFIIEDLKKAEDMLLNNPPGGKNRI 207
Query: 90 SFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLA---ESIVYNNKLLESGVERD 146
S + + LY++ + T + GG A ++ V N L+ +
Sbjct: 208 SKNVAYLLHARVALYEATWEKYHRGTAFVPGGSGWPGKDAQGYDADVEINYFLDEAIAAS 267
Query: 147 DIKLE----TQSLDT---------------------FQNAQFSSSMIKNMQGKNIILVSS 181
+ + +T +N + ++ + + V+S
Sbjct: 268 KFVADQMVGNLAENTDTPEGMNASLVSINPYYTMFCDENMEGYKEILMWKKFDESLGVTS 327
Query: 182 AYHL-----------KRSQL--YFQHFGINTKASCSDYLNAYYS 212
+ R + + G+ AS S Y +
Sbjct: 328 NLQMELCRNGGGSGWTRGMVNSFLMRNGLPVYASGSGYNPDWEK 371
>gi|299751655|ref|XP_002911667.1| hypothetical protein CC1G_14200 [Coprinopsis cinerea okayama7#130]
gi|298409473|gb|EFI28173.1| hypothetical protein CC1G_14200 [Coprinopsis cinerea okayama7#130]
Length = 336
Score = 36.8 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 13/79 (16%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQK-HGLAESIVY------NNKLLESGVER--DD 147
I E +L K ++ SGG + E+ Y L E ++ +
Sbjct: 131 IVEGAKLAK----KDTRSLLVFSGGQTRPASTTTEAESYLRLAISAKLLDEPDLDPVSER 186
Query: 148 IKLETQSLDTFQNAQFSSS 166
+ E +LD++QN FS +
Sbjct: 187 VTTENHALDSYQNLVFSIA 205
>gi|323210306|gb|EFZ95200.1| hypothetical protein SEEM6152_02520 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
Length = 129
Score = 36.8 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 25/80 (31%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDP-------------------QKHGLAESIVYNNK 137
I R+ K+ ++ISGG + G AE+ + +
Sbjct: 51 IDAACRIAKAQ-----GVPLLISGGIGHSTPFLYAVIARHPRYHTIRTSGRAEAAILADI 105
Query: 138 LLES-GVERDDIKLETQSLD 156
+ + + I LE +S +
Sbjct: 106 ANQFWHIPAEKIWLEDRSTN 125
>gi|260950147|ref|XP_002619370.1| hypothetical protein CLUG_00529 [Clavispora lusitaniae ATCC 42720]
gi|238846942|gb|EEQ36406.1| hypothetical protein CLUG_00529 [Clavispora lusitaniae ATCC 42720]
Length = 273
Score = 36.8 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 8/76 (10%)
Query: 112 MHCTIIISGGDPQKHGLAESIVY-----NNKLLESGVERDDIKLETQSLDTFQNAQFSS- 165
H ++ISGG +K +S Y L D I LE + D+F+N FS
Sbjct: 74 PHAVLVISGGQTKKDAGPQSEAYSYYQLAKALYGDDPVFDRICLEEFARDSFENVIFSIC 133
Query: 166 --SMIKNMQGKNIILV 179
IK + I +V
Sbjct: 134 RFFEIKETYPERISVV 149
>gi|315639105|ref|ZP_07894272.1| prephenate dehydrogenase [Campylobacter upsaliensis JV21]
gi|315480809|gb|EFU71446.1| prephenate dehydrogenase [Campylobacter upsaliensis JV21]
Length = 275
Score = 36.8 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 10/64 (15%)
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCS---DYLNAYYSIIPLSANFYLTELALKE------ 229
V+ H KR+ F H G+ S D+ A S +P + +F L ++E
Sbjct: 143 VADDLHQKRAVEIFSHLGMRIVFMDSTSHDHHTAIISHLPHAISFSLANYVMREEDRRNI 202
Query: 230 -YIG 232
Y+G
Sbjct: 203 AYLG 206
>gi|57505600|ref|ZP_00371527.1| Prephenate dehydrogenase [Campylobacter upsaliensis RM3195]
gi|57016147|gb|EAL52934.1| Prephenate dehydrogenase [Campylobacter upsaliensis RM3195]
Length = 275
Score = 36.8 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 10/64 (15%)
Query: 179 VSSAYHLKRSQLYFQHFGINTKASCS---DYLNAYYSIIPLSANFYLTELALKE------ 229
V+ H KR+ F H G+ S D+ A S +P + +F L ++E
Sbjct: 143 VADDLHQKRAVEIFSHLGMRIVFMDSTSHDHHTAIISHLPHAISFSLANYVMREEDRRNI 202
Query: 230 -YIG 232
Y+G
Sbjct: 203 AYLG 206
>gi|212539289|ref|XP_002149800.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
gi|210069542|gb|EEA23633.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
Length = 1038
Score = 36.8 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 17/94 (18%)
Query: 64 KDGNIIVLLGN-------GTTIIPTIPAIRIEPSFQSYSRIF-----ETMRLYKSCKQHS 111
DG ++L G G P A+ +P+ R+ RLY S
Sbjct: 827 PDGTFLILNGAHQGVAGFGLATDPNFNAVLYDPTKPVNQRMTVMANTTIARLYHSEAILL 886
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVER 145
+++SG DP+ E +E +
Sbjct: 887 PDGRVLVSGSDPEDATHPE-----EYRVEVFIPP 915
>gi|56552129|ref|YP_162968.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Zymomonas mobilis subsp. mobilis ZM4]
gi|56543703|gb|AAV89857.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 470
Score = 36.8 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
+L E GV+ +I LE + +T ++SMI + +L+ + H+ R F
Sbjct: 66 AEQLQEMGVKAQEIVLEPEGRNTAPAIALAASMIADKDPDACMLILPSDHVIRDVKAFHE 125
Query: 195 F 195
Sbjct: 126 A 126
>gi|307728829|ref|YP_003906053.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Burkholderia sp. CCGE1003]
gi|307583364|gb|ADN56762.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Burkholderia sp. CCGE1003]
Length = 477
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 8/129 (6%)
Query: 68 IIVLLGNGTTIIPTIPAI-RIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+I+ G+GT + P A+ + + R L + + +++ D +
Sbjct: 9 VILAGGSGTRLWPLSRALFPKQFLPLTGERTMLQETLNRLEGIAGIGSPLVVCHDDHR-- 66
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLK 186
+ +L + I LE S +T S+ G ++LV +A H+
Sbjct: 67 -----FIVAEQLRQRHSADATILLEPVSRNTAPAIAVSALQALKSGGDPLLLVLAADHVI 121
Query: 187 RSQLYFQHF 195
R F+
Sbjct: 122 RDVDLFREA 130
>gi|308275076|emb|CBX31675.1| hypothetical protein N47_E51870 [uncultured Desulfobacterium sp.]
Length = 243
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 16/96 (16%)
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR----SQLYFQ------------HFGINT 199
DT + M+K + K+ I VSS +H+ R + F G
Sbjct: 137 DTHLEILIAREMMKQLHLKSAIFVSSPHHMLRIRIIAVRVFHEILFPAWQGRKSRDGFML 196
Query: 200 KASCSDYLNAYYSIIPLSANFYLTELALKEYIGILI 235
S Y +A +++ L N + EYI I+
Sbjct: 197 TFVSSRYSDASGNMLSLIRNNRNLKYIYLEYIKIIW 232
>gi|220935247|ref|YP_002514146.1| Mannose-1-phosphate guanylyltransferase (GDP) [Thioalkalivibrio sp.
HL-EbGR7]
gi|219996557|gb|ACL73159.1| Mannose-1-phosphate guanylyltransferase (GDP) [Thioalkalivibrio sp.
HL-EbGR7]
Length = 488
Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSS-SMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
++ + +E + I LE +T A + + + ++++LV A H+ R F
Sbjct: 66 AEQMRQLELEPEAILLEPVGRNT---APAVALAALSQPDPESVLLVMPADHVIRDIAAFH 122
Query: 194 HF 195
Sbjct: 123 RA 124
>gi|170782607|ref|YP_001710941.1| hypothetical protein CMS_2267 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157177|emb|CAQ02358.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 194
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 41/139 (29%), Gaps = 27/139 (19%)
Query: 57 LLSPQWKKD-GNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCT 115
+ P + D ++I ++G P P R L T
Sbjct: 42 VFPPASQPDKADVIYVIG------PPNPTRRD---------------LAAKLVDEGYSDT 80
Query: 116 IIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKN 175
++ S P + + + + T A++ + K+
Sbjct: 81 VVFS--VPPTGPQSAAELAA---CQGEFPYPVTCDTPSPFTTQGEARYLKEKSEENGWKS 135
Query: 176 IILVSSAYHLKRSQLYFQH 194
I+++ H+ R+QL F
Sbjct: 136 AIVITWTPHVTRTQLIFSR 154
>gi|289577531|ref|YP_003476158.1| hypothetical protein Thit_0277 [Thermoanaerobacter italicus Ab9]
gi|289527244|gb|ADD01596.1| conserved hypothetical protein [Thermoanaerobacter italicus Ab9]
Length = 365
Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 38/145 (26%), Gaps = 19/145 (13%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
F ++G I L L P Q + G P ++
Sbjct: 5 FPYMGSPYIYEKLFSLLGHEVVTPPRPSQKTINY--------GVKYSPEFACFPLKVILG 56
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
+Y E + L TI+ SGG+ L G + + I +
Sbjct: 57 TY---LEAIEL--------GADTIVTSGGNGPCRAGYYGEAQKKILKNMGYDIEFIIFDE 105
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNII 177
D + + N ++
Sbjct: 106 PKRDLKEFMDNVKKIKGNNSWGKVL 130
>gi|224023681|ref|ZP_03642047.1| hypothetical protein BACCOPRO_00397 [Bacteroides coprophilus DSM
18228]
gi|224016903|gb|EEF74915.1| hypothetical protein BACCOPRO_00397 [Bacteroides coprophilus DSM
18228]
Length = 354
Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Query: 123 PQKHGLAESIVYNNKLLES--GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVS 180
P + S Y + + E V D I LE +T + S IK K I+V+
Sbjct: 55 PDNIWIVTSAAYADIVKEQLPEVAEDHILLEPCRRNTAPCIAYVSWKIKAKNPKANIVVT 114
Query: 181 SAYHLKRSQLYFQH 194
+ H+ F
Sbjct: 115 PSDHIVMDVREFAR 128
>gi|302545594|ref|ZP_07297936.1| putative integral membrane protein [Streptomyces hygroscopicus ATCC
53653]
gi|302463212|gb|EFL26305.1| putative integral membrane protein [Streptomyces himastatinicus
ATCC 53653]
Length = 85
Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 172 QGKNIILVSSAYHLKRSQLYFQHFGINTKASCSD 205
+LVS +H++R+ GI+ D
Sbjct: 3 GVHRAVLVSQGFHIRRAVALCGAAGIDAYGVAVD 36
>gi|188993125|ref|YP_001905135.1| phosphomannose isomerase / GDP-mannose pyrophosphorylase
[Xanthomonas campestris pv. campestris str. B100]
gi|189030074|sp|B0RVK6|XANB_XANCB RecName: Full=Xanthan biosynthesis protein xanB; Includes: RecName:
Full=Mannose-6-phosphate isomerase; AltName:
Full=Phosphohexomutase; AltName: Full=Phosphomannose
isomerase; Short=PMI; Includes: RecName:
Full=Mannose-1-phosphate guanylyl transferase; AltName:
Full=GDP-mannose pyrophosphorylase; Short=GMP;
Short=GMPP
gi|14090387|gb|AAK53463.1|AF204145_3 phosphomannose isomerase/GDP-D-mannose pyrophosphorylase
[Xanthomonas campestris pv. campestris]
gi|167734885|emb|CAP53097.1| phosphomannose isomerase / GDP-mannose pyrophosphorylase
[Xanthomonas campestris pv. campestris]
Length = 467
Score = 36.4 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Query: 68 IIVLLGNGTTIIP---TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
II+ G+GT + P + P +S + T + + H I++ +
Sbjct: 7 IILSGGSGTRLWPLSRETYPKQFLPLVGEHSMLQAT---WLRSAPVAAHAPIVV---ANE 60
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKNIILVSSAY 183
+H + +L + GV+ I LE + +T A +++ G ++LV +
Sbjct: 61 EHRFMAAE----QLQQLGVKPSAILLEPKGRNTAP-AIAVAALEATRNGGDPLLLVLPSD 115
Query: 184 HLKR 187
H+ R
Sbjct: 116 HVIR 119
>gi|289617084|emb|CBI56152.1| unnamed protein product [Sordaria macrospora]
Length = 895
Score = 36.4 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 10/78 (12%)
Query: 73 GNGTTIIPTIPAIRIEPSFQSYSRIF-----ETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
G G P A+ +P+ SRI R+Y S + ++ISG DPQ +
Sbjct: 698 GFGLANNPNKNALLYDPTKPVGSRITVMANTTIARMYHSEAITLLDGRVLISGSDPQDNV 757
Query: 128 LAESIVYNNKLLESGVER 145
E +E V
Sbjct: 758 NPE-----EYRVEVFVPP 770
>gi|307267115|ref|ZP_07548626.1| conserved hypothetical protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|320116752|ref|YP_004186911.1| hypothetical protein Thebr_2009 [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|306917868|gb|EFN48131.1| conserved hypothetical protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|319929843|gb|ADV80528.1| hypothetical protein Thebr_2009 [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 365
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 38/145 (26%), Gaps = 19/145 (13%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
F ++G + L L P Q D G P ++
Sbjct: 5 FPYMGSPYMYEKLFTLLGHEVITPPKPSQKTVDY--------GVKYSPEFACFPLKVILG 56
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
+Y E + L TI+ SGG+ L G + + I +
Sbjct: 57 TY---LEALEL--------GADTIVTSGGNGPCRAGYYGEAQKKILKNMGYDVEFIIFDE 105
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNII 177
D + N + +I
Sbjct: 106 PKRDLKTFMDNVKKIKGNNSWRRVI 130
>gi|67471653|sp|Q6XYT0|PSTB_SPIKU RecName: Full=Phosphate import ATP-binding protein PstB; AltName:
Full=ABC phosphate transporter; AltName:
Full=Phosphate-transporting ATPase
gi|34849451|gb|AAP58950.1| phosphate transporter [Spiroplasma kunkelii CR2-3x]
Length = 269
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 35/95 (36%), Gaps = 9/95 (9%)
Query: 98 FETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDT 157
+ L+ K + +SGG Q+ +A +I K+L L+ S
Sbjct: 146 LKRAALWDEVKDNLRDSAFALSGGQQQRLCIARAIAMKPKILLMDEPTSA--LDPISTSK 203
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF 192
+ + + + I+LV+ H++++
Sbjct: 204 IEEL-----ITQLKKDFTIVLVTH--HMQQAARVA 231
>gi|88704341|ref|ZP_01102055.1| Xanthan biosynthesis protein xanB [Congregibacter litoralis KT71]
gi|88701392|gb|EAQ98497.1| Xanthan biosynthesis protein xanB [Congregibacter litoralis KT71]
Length = 434
Score = 36.0 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 21/53 (39%)
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKR 187
+L + V+ I LE + +T ++ ++LV A H+ R
Sbjct: 30 AEQLRQLSVDPAAIILEPEGRNTAPAVALAAFQAVATDPDALLLVLPADHVIR 82
>gi|261749638|ref|YP_003257324.1| putative SanA-like protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497731|gb|ACX84181.1| putative SanA-like protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 175
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 42/113 (37%), Gaps = 8/113 (7%)
Query: 96 RIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSL 155
RI L+ K II+SG D ++ E + +L+ G+ I + +
Sbjct: 41 RIDAACFLFYQKKIRY----IIVSG-DNREKNYNEPKMMKKELISKGIPAYFIYEDFSGI 95
Query: 156 DTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLN 208
T + + K K ++S +H +R+ G++ + L+
Sbjct: 96 STIHSVL---RVYKVFNQKKFTIISQRFHNERAIFIGNCLGLDVIGFNAQSLS 145
>gi|256393729|ref|YP_003115293.1| mannose-1-phosphate guanylyltransferase (GDP) [Catenulispora
acidiphila DSM 44928]
gi|256359955|gb|ACU73452.1| Mannose-1-phosphate guanylyltransferase (GDP) [Catenulispora
acidiphila DSM 44928]
Length = 356
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 43/119 (36%), Gaps = 11/119 (9%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPS--FQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
I+ G+GT + P A + + + + +++G
Sbjct: 2 ILAGGSGTRLWPLSRAANPKFLHRLGGTDQTLLQATVARVSALSHPDQVYVVTG------ 55
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
+A + +L V D+I +E D+ ++++I + ++ V SA HL
Sbjct: 56 -VAHAAAVARQL--PRVPEDNILVEPAPRDSLAAIGLAAAVIARRDPEAVVAVYSADHL 111
>gi|21230100|ref|NP_636017.1| phosphomannose isomerase/GDP-mannose pyrophosphorylase [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66769909|ref|YP_244671.1| phosphomannose isomerase/GDP-mannose pyrophosphorylase [Xanthomonas
campestris pv. campestris str. 8004]
gi|189030075|sp|P0C7J3|XANB_XANCP RecName: Full=Xanthan biosynthesis protein xanB; Includes: RecName:
Full=Mannose-6-phosphate isomerase; AltName:
Full=Phosphohexomutase; AltName: Full=Phosphomannose
isomerase; Short=PMI; Includes: RecName:
Full=Mannose-1-phosphate guanylyl transferase; AltName:
Full=GDP-mannose pyrophosphorylase; Short=GMP;
Short=GMPP
gi|21111627|gb|AAM39941.1| phosphomannose isomerase/GDP-mannose pyrophosphorylase [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66575241|gb|AAY50651.1| phosphomannose isomerase/GDP-mannose pyrophosphorylase [Xanthomonas
campestris pv. campestris str. 8004]
Length = 467
Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKNIILVSSAYHLKR 187
+ +L + GV+ I LE + +T A +++ G ++LV + H+ R
Sbjct: 65 MAAEQLQQLGVKPSAILLEPKGRNTAP-AIAVAALEATRNGGDPLLLVLPSDHVIR 119
>gi|295111994|emb|CBL28744.1| hypothetical protein [Synergistetes bacterium SGP1]
Length = 955
Score = 36.0 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 148 IKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYL 207
+ L QS+ + +N F + + +G+ ++L+S L R H G A D
Sbjct: 133 LLLSPQSVSS-ENTAFIKEIGQFYKGQKVLLLS----LPRLAFLPHHPGWEPSAKPVDSF 187
Query: 208 NAYYSIIPLSANFYL-TELALK 228
+ ++ + ++A
Sbjct: 188 SNLGGLLRSREWHFRPPQIAFH 209
>gi|227889551|ref|ZP_04007356.1| hypothetical integral membrane protein [Lactobacillus johnsonii
ATCC 33200]
gi|227850029|gb|EEJ60115.1| hypothetical integral membrane protein [Lactobacillus johnsonii
ATCC 33200]
Length = 681
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIR-KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ L+ IF ++ + + Q K F S +LLF F+ + P +LL HL Q P+
Sbjct: 116 IFLTSIFTLLCLLYFINQHFSLKEKFTSAILLLFIFLSFSFNPLVLLWHLG---QYPVWY 172
Query: 60 PQ 61
P
Sbjct: 173 PA 174
>gi|167588616|ref|ZP_02381004.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Burkholderia ubonensis Bu]
Length = 524
Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 49/138 (35%), Gaps = 10/138 (7%)
Query: 51 FSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSY---SRIFETMRLYKSC 107
RP+ P + +I+ G+GT + P + + S + T R
Sbjct: 2 NRTLRPVPQPDMPRILPVILAGGSGTRLWPLSREQCPKQLIELVSDESPLSATARRLNGI 61
Query: 108 KQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM 167
+ S+ +++ G+ ++ + V I LE + +T ++
Sbjct: 62 ESASLGDRLLLVCGE-SHRFMSAAQVAGRAA------PARILLEPAARNTAPALTLAALD 114
Query: 168 IKNMQGKNIILVSSAYHL 185
+ + +++V A H+
Sbjct: 115 ARALADDPVLVVMPADHV 132
>gi|254361502|ref|ZP_04977641.1| possible membrane protein [Mannheimia haemolytica PHL213]
gi|153093016|gb|EDN74037.1| possible membrane protein [Mannheimia haemolytica PHL213]
Length = 227
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 4/115 (3%)
Query: 99 ETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTF 158
+ K Q +++SG + + E + LL+ G+ IK + TF
Sbjct: 87 YRLEAAKQLVQEGKVNQLLLSGDNKTPY-YNEPKTMTSDLLKMGIATSKIKQDYAGYTTF 145
Query: 159 QNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSI 213
+ + + K ++S +H +R+ + I+ + Y Y +
Sbjct: 146 YSIIRAKKVYK---LPPFTIISQKFHCERALFIAKFRDIDAICYAATYPEGAYQV 197
>gi|325920448|ref|ZP_08182376.1| mannose-1-phosphate guanylyltransferase (GDP) [Xanthomonas gardneri
ATCC 19865]
gi|325549095|gb|EGD20021.1| mannose-1-phosphate guanylyltransferase (GDP) [Xanthomonas gardneri
ATCC 19865]
Length = 467
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKNIILVSSAYHLKR 187
+ +L + GV+ I LE + +T A +++ G ++LV + H+ R
Sbjct: 65 MAAEQLQQLGVKPSAILLEPKGRNTAP-AIAVAALEATRNGGDPLLLVLPSDHVIR 119
>gi|145607239|ref|XP_001407639.1| hypothetical protein MGG_12148 [Magnaporthe oryzae 70-15]
gi|145014831|gb|EDJ99399.1| hypothetical protein MGG_12148 [Magnaporthe oryzae 70-15]
Length = 297
Score = 36.0 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 34/147 (23%)
Query: 69 IVLLGNGTTIIPTIPAIRIEPSF-QSYSR-----IFETMRLYKSCKQHSMHCTIIISGGD 122
I++ G+G +SY R E ++ + SGG
Sbjct: 12 IIVCGHGIWQGGPQHGHNEAEWLIESYKRGETSTFIEHIKAGLKALAQDSRAVLAFSGGP 71
Query: 123 PQKHG-LAESIVYNNKLLES----GVERD----------------DIKLETQSLDTFQNA 161
K L+E+ Y N + + I +E Q+LD++ N
Sbjct: 72 TWKETRLSEARSYANLAAANDYFGCIPPTGETAEAHPLSPIPLSTRIIVEEQALDSYYNV 131
Query: 162 QFSSSMIK-----NMQGKNIILVSSAY 183
F ++I + + +VS A+
Sbjct: 132 LF--AIIAFWRKFQTWPEKLTVVSHAF 156
>gi|326500924|dbj|BAJ95128.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534274|dbj|BAJ89487.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 36.0 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 36/224 (16%), Positives = 73/224 (32%), Gaps = 42/224 (18%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRP------LLSPQWKKDGNIIVLL 72
IR + + + +G+ ILL + ++ + + N++++
Sbjct: 51 KIRFFYEAHPVAVALILLSFGLSVLILLSVYETRFRTMRSGGDGVGAHPLPGLRNLVMVA 110
Query: 73 GNGTTIIPTIPAIRIEPSF-------------QSYSRIFETMRLYKSCKQHSMHCTIIIS 119
G+ + I E S+ + I E + + ++ S
Sbjct: 111 GHSIYTSASCGKIDREDSWFLEPYQKHPGQASTFLAHIKEGVEIAA----RDQGALLLFS 166
Query: 120 GGDPQKH--GLAESIVY------NNKLLESGVERDDIKLETQSLDTFQNAQFSS---SMI 168
GG+ +K +E+ Y R E + D+F+N FS +
Sbjct: 167 GGETRKDAGPRSEAQSYWAIAESEGWFGNDDSVRSRALTEEHARDSFENLLFSVCRFREL 226
Query: 169 KNMQGKNIILVSSAY------HLKRSQLYF--QHFGINTKASCS 204
+NI +VS + L RS L F + F + + +
Sbjct: 227 TGTYPQNITVVSYDFKEERFAQLHRSALGFPEERFFFSGTPATA 270
>gi|320589071|gb|EFX01539.1| duf218 domain containing protein [Grosmannia clavigera kw1407]
Length = 278
Score = 35.6 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 64/188 (34%), Gaps = 45/188 (23%)
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFET------MRLYKSCKQHSMHCT 115
+++++ G+G + + ET +R
Sbjct: 4 MASPNHLVIVCGHGIWLGGPRHGHDEAEWLIESYKAGETPTFVEHIRAGLQVLADDEQAV 63
Query: 116 IIISGGDPQKH-GLAESIVYNNK--------LLESGVERD---------DIKLETQSLDT 157
I SGG +K L+E Y N LL+SG + I +E Q+LD+
Sbjct: 64 IAFSGGPTRKETPLSEGRSYANLAAANGYFGLLQSGEDESGTVASQLHPRILVEEQALDS 123
Query: 158 FQNAQFS-SSMIKNMQ--GKNIILVSSAY--------H--------LKRSQLYFQHFGIN 198
+ N FS + + + +VS A+ H L R+++ F GIN
Sbjct: 124 YYNILFSLVAFWRAHAVWPARMTIVSHAFKQSRLVDGHCGPDAIAFLPRTRIGF--VGIN 181
Query: 199 TKASCSDY 206
+++
Sbjct: 182 PPNLPAEF 189
>gi|268319886|ref|YP_003293542.1| hypothetical protein FI9785_1415 [Lactobacillus johnsonii FI9785]
gi|262398261|emb|CAX67275.1| putative membrane protein [Lactobacillus johnsonii FI9785]
Length = 858
Score = 35.6 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIR-KIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLS 59
+ L+ IF ++ + + Q K F S +LLF F+ + P +LL HL Q P+
Sbjct: 293 IFLTSIFTLLCLLYFINQHFSLKEKFTSAILLLFIFLSFSFNPLVLLWHLG---QYPVWY 349
Query: 60 PQ 61
P
Sbjct: 350 PA 351
>gi|113955562|ref|YP_729397.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Synechococcus sp. CC9311]
gi|113882913|gb|ABI47871.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Synechococcus sp. CC9311]
Length = 479
Score = 35.6 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKNIILVSSAYHLKRSQLY 191
+ ++ + VE I LE +T A +++ ++LV +A H+ R + +
Sbjct: 69 IVAEQMRQIDVEPGAILLEPMGRNTAP-AVAVAALQATAKGDDPLLLVLAADHVIRDRSH 127
Query: 192 FQHF 195
FQ
Sbjct: 128 FQAA 131
>gi|318040929|ref|ZP_07972885.1| mannose-1-phosphate guanylyltransferase [Synechococcus sp. CB0101]
Length = 488
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 26/119 (21%)
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKNIILVSSAYHLKRSQLY 191
+ ++ + GV+ I LE +T A +++ ++ V +A H+ R
Sbjct: 68 IVAEQMRQIGVDPGVILLEPMGRNTAP-AVAVAALHATAHGDDPLLFVLAADHVIRDAAG 126
Query: 192 FQH----------------FGINTKASCSDY--------LNAYYSIIPLSANFYLTELA 226
F+ FGI A + Y ++ S +P++ + A
Sbjct: 127 FRQSVEAGRAAAEAGQLVTFGIVPTAPETGYGYIEAAEGVSGTQSPVPIARFVEKPDRA 185
>gi|332289791|ref|YP_004420643.1| hypothetical protein UMN179_01731 [Gallibacterium anatis UMN179]
gi|330432687|gb|AEC17746.1| hypothetical protein UMN179_01731 [Gallibacterium anatis UMN179]
Length = 242
Score = 35.6 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 55/153 (35%), Gaps = 9/153 (5%)
Query: 75 GTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVY 134
G + + + Y+R+ L K K +++SG D + E
Sbjct: 72 GLVLGTSKYFKNNTLNLFYYNRLSAAESLIKHHKVDY----LLLSG-DNRTLQYNEPQRM 126
Query: 135 NNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQH 194
LL+ GV + + T + + + K +++ +++ +H +R+ +H
Sbjct: 127 FKDLLKMGVPSQTMFFDYAGFRTLDSVVRADKIFKA---QSLTIITQRFHCERALFIAKH 183
Query: 195 FGINTKASCSDYLNAYYSIIPLSANFYLTELAL 227
+ I+ +D Y+ + F + L
Sbjct: 184 YDIDAICYEADNPEG-YTWVRFREFFARVQAVL 215
>gi|326390274|ref|ZP_08211834.1| hypothetical protein TheetDRAFT_1071 [Thermoanaerobacter
ethanolicus JW 200]
gi|325993719|gb|EGD52151.1| hypothetical protein TheetDRAFT_1071 [Thermoanaerobacter
ethanolicus JW 200]
Length = 365
Score = 35.6 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 39/145 (26%), Gaps = 19/145 (13%)
Query: 33 FSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQ 92
F ++G + L L P Q D G P ++
Sbjct: 5 FPYMGSPYMYEKLFTLLGHEVITPPKPSQKTVDY--------GVKYSPEFACFPLKVILG 56
Query: 93 SYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLET 152
+Y E + L TI+ SGG+ L G + + I +
Sbjct: 57 TY---LEALEL--------GADTIVTSGGNGPCRAGYYGEAQKKILQNMGYDVEFIIFDE 105
Query: 153 QSLDTFQNAQFSSSMIKNMQGKNII 177
D + + N + +I
Sbjct: 106 PKRDLKTFLENVKKIKGNNSWRQVI 130
>gi|161528288|ref|YP_001582114.1| phosphoribosylformylglycinamidine synthase II [Nitrosopumilus
maritimus SCM1]
gi|160339589|gb|ABX12676.1| phosphoribosylformylglycinamidine synthase II [Nitrosopumilus
maritimus SCM1]
Length = 721
Score = 35.6 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 44/127 (34%), Gaps = 26/127 (20%)
Query: 69 IVLLGNGTTIIPTIPAIR-IEPSFQSYSR-------------IFETMRLYKSCKQHSMHC 114
IV+L G+T I + S +S R I E + ++ K
Sbjct: 190 IVVLMGGSTGRDGIGGSQFASDSLESEDRSAVQIPDPFIEKLIIEAILEARNDKLIHAMK 249
Query: 115 TIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGK 174
+ GG ++E+ +E V++ T ++ ++ + +
Sbjct: 250 DL---GGGGLSCAISETADALEIGIEMDVDKVH---------TRESGMHPDEIMVSESQE 297
Query: 175 NIILVSS 181
+++V+S
Sbjct: 298 RMLIVTS 304
>gi|241763550|ref|ZP_04761602.1| P-type conjugative transfer protein TrbL [Acidovorax delafieldii
2AN]
gi|241367281|gb|EER61621.1| P-type conjugative transfer protein TrbL [Acidovorax delafieldii
2AN]
Length = 455
Score = 35.6 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 49/125 (39%), Gaps = 8/125 (6%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILL---KHLQFSYQRPL 57
+ L+WI +IVS++ L Q +F L + G+ ++P L L +
Sbjct: 149 LFLAWIVVIVSFFLLAVQ----LFVSLIEFKLTTLAGFVLVPFALWNKTAFLAEKVLGNV 204
Query: 58 LSPQWKKDGNIIVLL-GNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTI 116
+S K +++ G+G IPA Q+ + ++ + T
Sbjct: 205 VSSGIKVLVLAVIVGIGSGLFAEFNIPAGAEPSIDQALVIMLASLSMLALGIFGPGIATG 264
Query: 117 IISGG 121
++SGG
Sbjct: 265 LVSGG 269
>gi|103487078|ref|YP_616639.1| mannose-1-phosphate guanylyltransferase (GDP) [Sphingopyxis
alaskensis RB2256]
gi|98977155|gb|ABF53306.1| mannose-1-phosphate guanylyltransferase (GDP) [Sphingopyxis
alaskensis RB2256]
Length = 357
Score = 35.6 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 54/152 (35%), Gaps = 12/152 (7%)
Query: 68 IIVLLGNGTTIIPTIPA---IRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQ 124
+I+ G+GT + P A + +P S T+ ++ + +++ G P
Sbjct: 7 VILSGGSGTRLWPVSTAEAPKQFQPLTGGDSMFRHTVE--RASDRTRFAAPLVVCG--PA 62
Query: 125 KHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
E + + ++ I +E + +T ++ ++ +ILV A H
Sbjct: 63 HVAHVEVDLAAAR-----IDDARIIVEPAARNTAPAIALAALAARSDDPDAMILVMPADH 117
Query: 185 LKRSQLYFQHFGINTKASCSDYLNAYYSIIPL 216
+ F+ + + A + I P
Sbjct: 118 VMTDVPTFRKAVEAARPAVEGGALATFGIAPS 149
>gi|293335853|ref|NP_001170421.1| hypothetical protein LOC100384408 [Zea mays]
gi|224028901|gb|ACN33526.1| unknown [Zea mays]
gi|224035749|gb|ACN36950.1| unknown [Zea mays]
Length = 340
Score = 35.6 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 29/194 (14%), Positives = 60/194 (30%), Gaps = 29/194 (14%)
Query: 19 SIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDG---------NII 69
IR + + + +G+ ILL + ++ W DG N++
Sbjct: 47 RIRYFYEAHPVAVALILLSFGLSVLILLSVYETRFRTMRSVSAWSSDGGDYPLPMLRNLV 106
Query: 70 VLLGNGTTIIPTIPAIRIEPSFQS---------YSRIFETMRLYKSCKQHSMHCTIIISG 120
++ G+ E S+ + ++ ++ SG
Sbjct: 107 MVAGHSIYTSSRCGETESENSWFLEPYQKHAGQAATFLAHIKEGVGIAARDEGALLLFSG 166
Query: 121 GDPQKH--GLAESIVY------NNKLLESGVERDDIKLETQSLDTFQNAQFSS---SMIK 169
G+ ++ +E+ Y R E + D+F+N FS +
Sbjct: 167 GETRRDAGPRSEAQSYWAIAESKGWFGNDEGVRSRALTEEHARDSFENLLFSVCRFRELT 226
Query: 170 NMQGKNIILVSSAY 183
+NI +VS +
Sbjct: 227 GRYPQNITVVSYDF 240
>gi|78062662|ref|YP_372570.1| mannose-1-phosphate guanylyltransferase (GDP) [Burkholderia sp.
383]
gi|77970547|gb|ABB11926.1| mannose-6-phosphate isomerase, type 2 [Burkholderia sp. 383]
Length = 526
Score = 35.6 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 53/152 (34%), Gaps = 21/152 (13%)
Query: 56 PLLSPQWKKDGNIIVLLGNGTTIIP---TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSM 112
P+ +P + +I+ G+GT + P ++ + S + T R +
Sbjct: 7 PVPAPDLPRILPVILAGGSGTRLWPLSREQYPKQLIELTSNESPLSATARRLNGIANAVL 66
Query: 113 HCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQ 172
+++ G+ Q ++ + V + I LE + +T ++ ++
Sbjct: 67 GDKLLLVCGE-QHRIMSAAQVVDRAA------PARILLEPAARNTAPALTLAALDASELE 119
Query: 173 GKNIILVSSAYHL-----------KRSQLYFQ 193
++ V A H+ R+ Y Q
Sbjct: 120 DDPVLAVMPADHVIADVGAFQDTIARAARYAQ 151
>gi|115358379|ref|YP_775517.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Burkholderia ambifaria AMMD]
gi|115283667|gb|ABI89183.1| mannose-6-phosphate isomerase, type 2 [Burkholderia ambifaria AMMD]
Length = 525
Score = 35.6 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 57/153 (37%), Gaps = 21/153 (13%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIP---TIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
RP+ P+ + +I+ G+GT + P ++ + S + T R S
Sbjct: 5 RPVPEPELPRILPVILAGGSGTRLWPLSREQYPKQLIELTSNESPLSATARRLNGIANAS 64
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS------ 165
+ T+++ G+ Q ++ + V I LE + +T ++
Sbjct: 65 LGDTLLLVCGE-QHRIMSAAQVLGRAA------PARILLEPAARNTAPALTLAALDASVL 117
Query: 166 ---SMIKNMQGKNIILVSSAYH--LKRSQLYFQ 193
++ M ++I A+H + R+ Y Q
Sbjct: 118 ADDPVLAVMPADHVIGDVGAFHEAIGRAARYAQ 150
>gi|171320278|ref|ZP_02909333.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Burkholderia ambifaria MEX-5]
gi|171094481|gb|EDT39540.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Burkholderia ambifaria MEX-5]
Length = 526
Score = 35.6 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 56/153 (36%), Gaps = 21/153 (13%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIP---TIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
RP+ P+ + +I+ G+GT + P ++ + S + T R S
Sbjct: 6 RPVPEPELPRILPVILAGGSGTRLWPLSREQYPKQLIELTSNESPLSATARRLNGIANAS 65
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS------ 165
+ +++ G+ Q ++ + V I LE + +T ++
Sbjct: 66 LGDKLLLVCGE-QHRIMSAAQVLGRAA------PARILLEPAARNTAPALTLAALDASVL 118
Query: 166 ---SMIKNMQGKNIILVSSAYH--LKRSQLYFQ 193
++ M ++I A+H + R+ Y Q
Sbjct: 119 ADDPVLAVMPADHVIGDVGAFHEAIGRAARYAQ 151
>gi|172063134|ref|YP_001810785.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Burkholderia ambifaria MC40-6]
gi|171995651|gb|ACB66569.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Burkholderia ambifaria MC40-6]
Length = 526
Score = 35.6 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 57/153 (37%), Gaps = 21/153 (13%)
Query: 55 RPLLSPQWKKDGNIIVLLGNGTTIIP---TIPAIRIEPSFQSYSRIFETMRLYKSCKQHS 111
RP+ P+ + +I+ G+GT + P ++ + S + T R S
Sbjct: 6 RPVPEPELPRILPVILAGGSGTRLWPLSREQYPKQLIELTSNESPLSATARRLNGIANAS 65
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSS------ 165
+ T+++ G+ Q ++ + V I LE + +T ++
Sbjct: 66 LGDTLLLVCGE-QHRIMSAAQVLGRAA------PARILLEPAARNTAPALTLAALDASVL 118
Query: 166 ---SMIKNMQGKNIILVSSAYH--LKRSQLYFQ 193
++ M ++I A+H + R+ Y Q
Sbjct: 119 ADDPVLAVMPADHVIGDVGAFHEAIGRAARYAQ 151
>gi|88808193|ref|ZP_01123704.1| GDP-mannose pyrophosphorylase [Synechococcus sp. WH 7805]
gi|88788232|gb|EAR19388.1| GDP-mannose pyrophosphorylase [Synechococcus sp. WH 7805]
Length = 488
Score = 35.6 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 133 VYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSM-IKNMQGKNIILVSSAYHLKRSQLY 191
+ ++ ++GVE I LE +T A +++ ++LV +A H+ R +
Sbjct: 69 IVAEQMRQTGVEPGAILLEPMGRNTAP-AVAVAALQATARGEDPLLLVLAADHVIRDAAH 127
Query: 192 FQHF 195
F+
Sbjct: 128 FRTA 131
>gi|121533468|ref|ZP_01665296.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Thermosinus carboxydivorans Nor1]
gi|121308027|gb|EAX48941.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Thermosinus carboxydivorans Nor1]
Length = 460
Score = 35.6 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 43/132 (32%), Gaps = 12/132 (9%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFE--TMRLYKSCKQHSMHCTIIISGGDPQK 125
+I+L G G T + + F + + + ++++ D
Sbjct: 3 VIILAGGGGTRLFPLSRAGFPKQFLKLDGGMSLLALTVKRFLAVARPADIVVVTNKDYVH 62
Query: 126 HGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKN---MQGKNIILVSSA 182
H +E L +G + LE + +T ++ + Q ++ V+ +
Sbjct: 63 HVRSE-------LAAAGASDAHVVLEPAARNTAPAIALAARYCADELGAQPDEVLFVTPS 115
Query: 183 YHLKRSQLYFQH 194
H+ R F
Sbjct: 116 DHIVRPVEIFGR 127
>gi|15837444|ref|NP_298132.1| hypothetical protein XF0842 [Xylella fastidiosa 9a5c]
gi|9105746|gb|AAF83652.1|AE003923_10 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 790
Score = 35.2 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 13/78 (16%)
Query: 158 FQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYF-------QHFGINTKASCSDYLNAY 210
++NA + + + + I +S YH + F + + A + Y N
Sbjct: 321 WENALARARIATDNPAQRRIFYTSLYHSLLAPTLFSDVDGRYRGMDLQVHALPAGYHN-- 378
Query: 211 YSIIPLSANFYLTELALK 228
+ + + T AL
Sbjct: 379 ----YSTYSLWDTYRALH 392
>gi|282864964|ref|ZP_06274018.1| hypothetical protein SACTEDRAFT_4563 [Streptomyces sp. ACTE]
gi|282560389|gb|EFB65937.1| hypothetical protein SACTEDRAFT_4563 [Streptomyces sp. ACTE]
Length = 106
Score = 35.2 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 134 YNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHLKRSQLYFQ 193
+ LE QS T++N ++++ I + S H + + Y +
Sbjct: 1 MAGYAKSVLAFDGTVLLEDQSATTWENITNVIPLLED--VDRIKIASQPAHALKDRAYLR 58
Query: 194 HF 195
Sbjct: 59 RQ 60
>gi|304393779|ref|ZP_07375704.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Ahrensia sp. R2A130]
gi|303293978|gb|EFL88353.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Ahrensia sp. R2A130]
Length = 476
Score = 35.2 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 7/118 (5%)
Query: 68 IIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHG 127
+I+ G GT + P +P M+ + + II+ G
Sbjct: 9 VILAGGGGTRLWPLSRTRHGKPFLDLTGDGSLLMQTLQRAALVTDTAPIIVCG------- 61
Query: 128 LAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYHL 185
E + +L S + I LE +T ++ ++LV + H+
Sbjct: 62 EEERFLAAEELRSSEISGGRILLEAVQRNTAPALTLAALEATRDGADPLLLVLPSDHI 119
>gi|67524105|ref|XP_660114.1| hypothetical protein AN2510.2 [Aspergillus nidulans FGSC A4]
gi|40744839|gb|EAA63995.1| hypothetical protein AN2510.2 [Aspergillus nidulans FGSC A4]
gi|259487936|tpe|CBF86998.1| TPA: DUF218 domain protein (AFU_orthologue; AFUA_3G14300)
[Aspergillus nidulans FGSC A4]
Length = 258
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 40/101 (39%), Gaps = 20/101 (19%)
Query: 97 IFETMRLYKSCKQHSMHCTIIISGGDPQKHG--LAESIVYNNKLLESG-------VERDD 147
+ +RL + ++ SGG ++ LAE Y N ++ ++
Sbjct: 46 VKAGIRLLAGDE----GALLVFSGGATKRPATELAEGESYLNLARDNEFFGYASSIDSSR 101
Query: 148 IKLETQSLDTFQNAQFSSSMIK-----NMQGKNIILVSSAY 183
+ +E + D++QN FS +++ + +V+ +
Sbjct: 102 VAVEMHATDSYQNVLFS--ILRFRLHTGRYPDQVTVVTHEF 140
>gi|187731127|ref|YP_001882274.1| hypothetical protein SbBS512_E3996 [Shigella boydii CDC 3083-94]
gi|187428119|gb|ACD07393.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
gi|320174412|gb|EFW49557.1| hypothetical protein SDB_03085 [Shigella dysenteriae CDC 74-1112]
Length = 442
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 4/94 (4%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQ 61
++ IF+++ W L Q IR F+ +LL+ + P+ L Q
Sbjct: 1 MIGAIFVLLVAWLFLSQWIRITVFVVA-ILLWLNVLTLAGPSFSLWPAG---QPTTTVTT 56
Query: 62 WKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYS 95
+ V G ++ +PA P+ + +
Sbjct: 57 TGGNAAATVATTGGAPVVGDMPAQTTPPTTANLN 90
>gi|206900426|ref|YP_002250434.1| heptosyltransferase family [Dictyoglomus thermophilum H-6-12]
gi|206739529|gb|ACI18587.1| heptosyltransferase family [Dictyoglomus thermophilum H-6-12]
Length = 781
Score = 35.2 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSY 53
ML+ + F+ W L + RKI F +L F +G I + L K + ++
Sbjct: 251 MLVYFYFIFRIIWGYLTKKQRKIIFAFIILLFFVGLGILIKSSYLQKRILSAF 303
>gi|125540324|gb|EAY86719.1| hypothetical protein OsI_08103 [Oryza sativa Indica Group]
Length = 242
Score = 35.2 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 43/128 (33%), Gaps = 11/128 (8%)
Query: 28 CFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSPQWKKDGNIIVLLGNGTTIIPTIPAIRI 87
C+ +L +G ++ L + Y+ + + ++ V+ +G + +
Sbjct: 33 CWNILPGILGALTALVLMSALLYYPYKWSFDDGK-SPEFSVAVVGVSGLDPDRDLGRPTL 91
Query: 88 EPSFQSYSRIFETMRLYKSCKQHSMHCTI------IISGGDP----QKHGLAESIVYNNK 137
+P+F RI E R +C + + + SG P + E+
Sbjct: 92 DPTFDLTVRIKEPRRYSVACVERGTTAAVSYRGVQLASGPAPELCGRNENTTEARSVMAW 151
Query: 138 LLESGVER 145
+ V
Sbjct: 152 GHANAVPE 159
>gi|194365133|ref|YP_002027743.1| ABC transporter-like protein [Stenotrophomonas maltophilia R551-3]
gi|194347937|gb|ACF51060.1| ABC transporter related [Stenotrophomonas maltophilia R551-3]
Length = 315
Score = 35.2 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 82 IPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLES 141
+ AI+ P Q+ RI ++ Y+ + +SGG Q+ LA ++++ +LL
Sbjct: 105 LAAIQDLPRAQARQRIEALLQQYR-LQDRQPQLAGTLSGGQKQRLALAGAVIHGPELLFL 163
Query: 142 GVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
+ E++ D ++ ++ + +LVS+ Y
Sbjct: 164 DEPTSAVDPESR-RDFWE------ALFELADAGTTVLVSTHYM 199
>gi|152981626|ref|YP_001352336.1| mannose-6-phosphate isomerase / mannose-1-phosphate
guanylyltransferase [Janthinobacterium sp. Marseille]
gi|151281703|gb|ABR90113.1| mannose-6-phosphate isomerase / mannose-1-phosphate
guanylyltransferase [Janthinobacterium sp. Marseille]
Length = 470
Score = 35.2 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 60/176 (34%), Gaps = 33/176 (18%)
Query: 68 IIVLLGNGTTIIP-TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+I+ G+G+ + P + A+ + R + + M +++ G D +
Sbjct: 4 VILSGGSGSRLWPLSRAALPKQLLPLVSERTMLQDTVLRISGWKGMAPPLVVCGDDHR-- 61
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILV------- 179
+ +L + G+ I LE Q +T +++ + + ++LV
Sbjct: 62 -----FLVAEQLRQIGITPTAILLEAQGRNTAPAVAAAANYLAAIDPDAVMLVLPADHVI 116
Query: 180 --SSAYHLKRSQLYFQH---------FGINTKASCSDYLNAYYSIIPLSANFYLTE 224
A+H+ + + FGI A+ + Y I A +
Sbjct: 117 VDDDAFHV--AVMLAADAIGSTALATFGIVPTAAETGY-----GYIRRGAALDTSN 165
>gi|34499849|ref|NP_904064.1| ABC transporter ATP-binding protein [Chromobacterium violaceum ATCC
12472]
gi|34105699|gb|AAQ62053.1| probable ABC transporter ATP-binding protein [Chromobacterium
violaceum ATCC 12472]
Length = 309
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 77 TIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNN 136
I +P + P + +R+ E + L + +SGG Q+ G+A ++ +
Sbjct: 94 QNIAAVPQLLKWPRPRIQARVDELLALLRLPDGLRRRYPHQLSGGQQQRVGVARALAADP 153
Query: 137 KLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSA 182
LL + T++ N Q + I + GK IILV+
Sbjct: 154 DLLLMDEPFGALDPVTRA-----NLQQELARIHRLSGKTIILVTHD 194
>gi|226307785|ref|YP_002767745.1| hypothetical protein RER_42980 [Rhodococcus erythropolis PR4]
gi|226186902|dbj|BAH35006.1| hypothetical protein RER_42980 [Rhodococcus erythropolis PR4]
Length = 197
Score = 35.2 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 36/133 (27%), Gaps = 31/133 (23%)
Query: 61 QWKKDGNIIVLLGNGTTIIPTIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIIS- 119
+ + IV+LG R ++L K +I S
Sbjct: 52 DAPRSADAIVVLGGAHD-----------------GREEVGIQLMKD----GYAPRLIFSN 90
Query: 120 -GGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIIL 178
GD K + + ++ V T M K +I+
Sbjct: 91 PYGDNDKKMRSICEGTFDFPVDCFVPS--------PSTTEGEGFEIERMANANGWKTVIV 142
Query: 179 VSSAYHLKRSQLY 191
V+ H+ R++
Sbjct: 143 VTFVPHISRARHI 155
>gi|154252375|ref|YP_001413199.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Parvibaculum lavamentivorans DS-1]
gi|154156325|gb|ABS63542.1| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate
isomerase [Parvibaculum lavamentivorans DS-1]
Length = 477
Score = 35.2 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 112 MHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNM 171
M +I+SGG + +Y +LL V + LET +L ++A FS+ +I +
Sbjct: 1 MIYPVILSGGVGSRLWPTSRALYPKQLLPL-VSERAMLLET-ALRVVEDAHFSAPIIVSN 58
Query: 172 QGKNIIL 178
I+
Sbjct: 59 DEHRFII 65
>gi|195127630|ref|XP_002008271.1| GI13398 [Drosophila mojavensis]
gi|193919880|gb|EDW18747.1| GI13398 [Drosophila mojavensis]
Length = 355
Score = 35.2 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 101 MRLYKSCKQHSMHCTIIISGGDPQKHGLAESIVYNNKLLESGVERDDIKLETQSLDTFQN 160
+RL S I+I+GG Q G+ + + ++ V DI +Q++ +N
Sbjct: 20 VRLLHQRVPASRPPKILITGGLGQL-GIECAKLMRSQYGSENVILSDIIKPSQAV--LEN 76
Query: 161 AQFS-SSMIKNMQGKNIIL 178
+ + ++ + I++
Sbjct: 77 GPYIFADILDFKGLQKIVV 95
>gi|120435326|ref|YP_861012.1| sterol desaturase family protein [Gramella forsetii KT0803]
gi|117577476|emb|CAL65945.1| sterol desaturase family protein [Gramella forsetii KT0803]
Length = 297
Score = 35.2 bits (80), Expect = 8.9, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 2 LLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLK 47
LL WI IV W ++ RK F++ F +LF+F + +I L
Sbjct: 40 LLVWILEIVIPWRKDQKAFRKGFWLDSFYILFNFFLFSLIVYNALS 85
>gi|159044446|ref|YP_001533240.1| alginate biosynthesis protein [Dinoroseobacter shibae DFL 12]
gi|157912206|gb|ABV93639.1| alginate biosynthesis protein [Dinoroseobacter shibae DFL 12]
Length = 476
Score = 35.2 bits (80), Expect = 9.0, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 68 IIVLLGNGTTIIP-TIPAIRIEPSFQSYSRIFETMRLYKSCKQHSMHCTIIISGGDPQKH 126
+I+ G+G+ + P + + + + +R L + H TII GD +
Sbjct: 5 VILAGGSGSRLWPASRKSYPKQFTELVGARSLFQDTLARLQGPHFAAPTIIT--GDDFRF 62
Query: 127 GLAESIVYNNKLLESGVERDDIKLETQSLDTFQNAQFSSSMIKNMQGKNIILVSSAYH 184
AE +L ++GV DI LE +T A ++++ ++LVS + H
Sbjct: 63 ITAE------QLDDAGVTGADILLEPAGRNTAP-AILAAALRHEATPDAVLLVSPSDH 113
>gi|325126616|gb|ADY85946.1| Hypothetical conserved protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 90
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 11/57 (19%)
Query: 180 SSAYHLKRSQLYFQHFGINTKASCSDYLNAYYSIIPLSANFYLTELALKEYIGILIA 236
SS +H+ R +Y + G++ Y YL L+E+ G+ +
Sbjct: 17 SSKFHVFRLTIYAKRAGVDANGIG-FYTRP----------LYLPNAVLREFAGMFVM 62
>gi|48478270|ref|YP_023976.1| arsenite-transporting ATPase [Picrophilus torridus DSM 9790]
gi|48430918|gb|AAT43783.1| arsenite-transporting ATPase [Picrophilus torridus DSM 9790]
Length = 386
Score = 34.8 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 144 ERDDIKLETQSLDT-FQNAQFSSSMIKNMQGKNIILVSSAYHL-----KRSQLYFQHFGI 197
D + +S +T +++ +++N + +I LV++A H+ KR+ Y +G
Sbjct: 180 PSDRVF---KSAETLYKDLLNIQEIMQNPEITSIRLVTNADHMSFNETKRAYTYLLLYGY 236
Query: 198 NTKASCSD 205
A +
Sbjct: 237 PVDAVIVN 244
>gi|150026504|ref|YP_001297330.1| colanic biosynthesis UDP-glucose lipidcarrier transferase
[Flavobacterium psychrophilum JIP02/86]
gi|149773045|emb|CAL44529.1| Putative colanic biosynthesis UDP-glucose lipidcarrier transferase
[Flavobacterium psychrophilum JIP02/86]
Length = 452
Score = 34.8 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 1 MLLSWIFLIVSYWHLLCQSIRKIFFMSCFMLLFSFIGWGIIPTILLKHLQFSYQRPLLSP 60
ML +FL + R+I F F LLF FIG I K L F Y +
Sbjct: 72 MLFKQLFLFSLFLIAFFSITREIIF--SFRLLFYFIGLSFIGITFFKGLLFYYLKKYRIV 129
Query: 61 QWKKDGNIIVLL 72
N I++
Sbjct: 130 LCGNYRNAIIVG 141
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.316 0.155 0.447
Lambda K H
0.267 0.0472 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,000,433,744
Number of Sequences: 14124377
Number of extensions: 221054255
Number of successful extensions: 1156478
Number of sequences better than 10.0: 3699
Number of HSP's better than 10.0 without gapping: 3679
Number of HSP's successfully gapped in prelim test: 1577
Number of HSP's that attempted gapping in prelim test: 1144360
Number of HSP's gapped (non-prelim): 6186
length of query: 242
length of database: 4,842,793,630
effective HSP length: 135
effective length of query: 107
effective length of database: 2,936,002,735
effective search space: 314152292645
effective search space used: 314152292645
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.9 bits)
S2: 80 (35.2 bits)