HHsearch alignment of GI: 255764509 and MMDB domain: 2r4f_A_86-153_259-441
>2r4f_A (A:86-153,A:259-441) 3-hydroxy-3-methylglutaryl-coenzyme A reductase; oxidoreductase, cholesterol, biocynthesis, HMG-COA, NADPH, statin, alternative splicing; HET: RIE; 1.70A {Homo sapiens} PDB: 2q1l_A* 2q6c_A* 2q6b_A* 3bgl_A* 3cct_A* 3ccw_A* 3ccz_A* 3cd0_A* 3cd5_A* 3cd7_A* 3cda_A* 3cdb_A* 1dqa_A* 1dq9_A* 1dq8_A* 1hw8_A* 1hw9_A* 1hwi_A* 1hwj_A* 1hwk_A* ...
Probab=100.00 E-value=0 Score=579.56 Aligned_cols=240 Identities=36% Similarity=0.547 Sum_probs=223.8
Q ss_pred CCCCCEEEEEEEEEEECCEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCHH
Q ss_conf 97641037861127603756765136774788653034538999989999999559988999967922412599858977
Q gi|255764509|r 1 MHMKKVSSISMPMRWIGPMKITGNVIQDKVKVPLATYEYPLWHSVKRGAHISMLCPDGIRATLIDERMTRSIFFETENAE 80 (351)
Q Consensus 1 m~en~IG~~~lPlGia~~l~InG~~a~~~y~VPMATeE~SvVAAas~gak~~~~~sGG~~t~~~~~~m~r~~~f~~~~~~ 80 (351)
||||+||+++||+|||+||+|||+ +|+|||||||||||||+|||||+ ++.+|||++.++++.
T Consensus 7 ~iEN~IG~~~vPlGva~~l~InG~----~~~vPmAteE~svVAs~srgak~-i~~~GG~~~~v~~~g------------- 68 (251)
T 2r4f_A 7 CCENVIGYMPIPVGVAGPLCLDEK----EFQVPMATTEGCLVASTNRGCRA-IGLGGGASSRVLADG------------- 68 (251)
T ss_dssp TBSSEEEEEEEEEEEEEEEEETTE----EEEEEEECCCTTHHHHHHHHHHH-HHHTTCBEEEEEEEE-------------
T ss_pred CCCCEEEEEECCEEEECCEEECCE----EEEEEEEEEHHHHHHHHHHHHHH-HHCCCCEEEEECCCC-------------
T ss_conf 765100045212079647899687----99887675077899999889999-871798499985785-------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 89999976175099999997301578047888878738869999999732006721588999999999998679814897
Q gi|255764509|r 81 MALTALQEITLKKAEIARVIEQTSQFTRFLQLHSQIAGNLLFLRLEFATGDASGHNMVTKAADAVMDWILSQWSYLHYGS 160 (351)
Q Consensus 81 ~a~~~~~~i~~~~~~i~~~a~~~sr~ggl~~i~~~~~g~~v~l~~~~dt~DAMGaNmvnt~~E~v~~~i~~~~~~~~~~~ 160 (351)
T Consensus 69 -------------------------------------------------------------------------------- 68 (251)
T 2r4f_A 69 -------------------------------------------------------------------------------- 68 (251)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred ECCCCCHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHH
Q ss_conf 34774312333554310377207999987569999757389999999887866565542200220216216677888887
Q gi|255764509|r 161 VSGNICSDKKATAINGIMGRGKNFVAEITINRAICQKYLRTSPEKIILLNTQKNLIGTFLAGGIRSANAHFANMLLAYYL 240 (351)
Q Consensus 161 ilsN~~tdkk~s~~n~~~~rG~~V~Ae~~i~~~~~~~~l~~~~e~~~~~~~~~~~~a~~~~~~a~t~NkgimNgI~Av~l 240 (351)
+++.|++.+||++|+||+.||.+++++++++++|++++++..++.++++|+||+.|||||+||||+|+||
T Consensus 69 ----------~s~~n~~~gRg~~Viae~~i~~~~~~~~l~~~~e~l~~~~~~~~~~a~~~~~ra~t~Nkgi~NgI~Av~l 138 (251)
T 2r4f_A 69 ----------PAAINWIEGRGKSVVCEAVIPAKVVREVLKTTTEAMIEVNINKNLVGSAMAGSIGGYNAHAANIVTAIYI 138 (251)
T ss_dssp ----------CCHHHHHHCCEEEEEEEEEECHHHHHHTSSSCHHHHHHHHHHHHTHHHHHTTCSSEESSSHHHHHHHHHH
T ss_pred ----------HHHEEEECCCEEEEEHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
T ss_conf ----------1322444153037521104619999988701699999999998898876442246644410012144443
Q ss_pred HCCCCHHHHHHHCCCEE---EEEEECCEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHCCCCCCCC--CCCHHHHHHHH
Q ss_conf 62763788886403202---56872890899998056467730664468889999986086877887--76988999999
Q gi|255764509|r 241 ATGQDAANIVEGSQGLT---YAKLHDDSLYFSCTIPNLILGCVGNGKNIPAIKNNLTALGCIEERKT--GDNARRLAAIC 315 (351)
Q Consensus 241 ATGnD~a~v~a~~~a~t---~~~~~~~~L~g~i~lPsl~vGtVGG~t~lp~~~~~l~ilg~~~~~~~--~~~A~~La~ii 315 (351)
|||||||+|+|++|+|+ ||+.++++|++++|||||+||||||+|++|+||+||+||||+++++. .+||++||+||
T Consensus 139 ATGqD~raV~~~~~a~a~~~~~~~~~~~L~~sitlPsl~VGtVGGgt~lp~~~~~L~ilg~~g~~~~~~~~~A~~LA~Ii 218 (251)
T 2r4f_A 139 ACGQDAAQNVGSSNCITLMEASGPTNEDLYISCTMPSIEIGTVGGGTNLLPQQACLQMLGVQGACKDNPGENARQLARIV 218 (251)
T ss_dssp HTTCCGGGHHHHTCEEEEEEEESTTSCEEEEEEEEEEECCCSBSGGGGSHHHHHHHHHTTCCSCCSSSTTHHHHHHHHHH
T ss_pred HHCCCHHHHHHHCCEEEEEEEEECCCCEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
T ss_conf 63386788875225148878876589909999994682079746867765699999983988768889870899999999
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
Q ss_conf 9999888999999880788689999872603367
Q gi|255764509|r 316 AATVLCGELSLLAAQTNPGELMEAHLRLERMHLN 349 (351)
Q Consensus 316 AavgLAqnlaal~Al~t~G~iq~gHmkl~R~~~~ 349 (351)
||+|||||||+|+||+++| ||+|||||+|++++
T Consensus 219 aa~gLA~nlsal~Al~t~g-i~~gHm~L~r~~l~ 251 (251)
T 2r4f_A 219 CGTVMAGELSLMAALAAGH-LVKSHMIHNRSKIN 251 (251)
T ss_dssp HHHHHHHHHHHHHHHHHC----------------
T ss_pred HHHHHHHHHHHHHHHHCCC-HHHHHHHHHCCCCC
T ss_conf 9999999999999987070-89999998445799