Query gi|255764509|ref|YP_003065434.2| hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 351
No_of_seqs 116 out of 668
Neff 5.8
Searched_HMMs 13730
Date Wed Jun 1 11:11:12 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 255764509.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1dqaa4 d.179.1.1 (A:462-586,A 100.0 0 0 524.9 23.6 223 1-344 65-292 (292)
2 d1r31a2 d.179.1.1 (A:3-110,A:2 100.0 0 0 421.1 18.2 207 1-337 48-266 (266)
3 d1dqaa1 d.58.20.1 (A:587-703) 100.0 1.3E-34 9.7E-39 233.3 14.2 115 67-181 1-117 (117)
4 d1r31a1 d.58.20.1 (A:111-220) 99.9 7.4E-25 5.4E-29 172.3 12.6 99 67-167 1-109 (110)
5 d1r31a2 d.179.1.1 (A:3-110,A:2 90.7 0.0014 1E-07 38.8 -6.1 86 131-241 164-251 (266)
6 d3bypa1 d.52.9.1 (A:6-87) Puta 82.1 1.3 9.4E-05 20.3 10.0 66 91-156 5-72 (82)
7 d2qfia1 d.52.9.1 (A:209-290) F 34.6 1.9 0.00014 19.2 -1.6 66 91-156 5-70 (82)
8 d1m55a_ d.89.1.3 (A:) Replicat 20.0 20 0.0014 12.9 2.5 81 109-198 78-158 (193)
9 d1ctda_ a.39.1.5 (A:) Troponin 15.5 25 0.0018 12.2 3.1 29 289-319 6-34 (34)
10 d2gv8a1 c.3.1.5 (A:3-180,A:288 10.6 35 0.0026 11.3 1.2 13 53-65 24-36 (335)
No 1
>d1dqaa4 d.179.1.1 (A:462-586,A:704-870) Substrate-binding domain of HMG-CoA reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=0 Score=524.88 Aligned_cols=223 Identities=35% Similarity=0.538 Sum_probs=206.1
Q ss_pred CCCCCEEEEEEEEEEECCEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCHH
Q ss_conf 97641037861127603756765136774788653034538999989999999559988999967922412599858977
Q gi|255764509|r 1 MHMKKVSSISMPMRWIGPMKITGNVIQDKVKVPLATYEYPLWHSVKRGAHISMLCPDGIRATLIDERMTRSIFFETENAE 80 (351)
Q Consensus 1 m~en~IG~~~lPlGia~~l~InG~~a~~~y~VPMATeE~SvVAAas~gak~~~~~sGG~~t~~~~~~m~r~~~f~~~~~~ 80 (351)
++||+||+++||+|||+||+|||+ +|+|||||||||||||+|||||+ ++.+|||++.+.++
T Consensus 65 ~~EN~IG~~~lPlGvAgpl~InG~----~y~VPMATeEgslVAS~nrGaK~-i~~~GG~~~~v~~d-------------- 125 (292)
T d1dqaa4 65 CCENVIGYMPIPVGVAGPLCLDEK----EFQVPMATTEGCLVASTNRGCRA-IGLGGGASSRVLAD-------------- 125 (292)
T ss_dssp TCSSEEEEEEEEEEEEEEEEETTE----EEEEEEECSCTTHHHHHHHHHHH-HHHTTCBEEEEEEE--------------
T ss_pred CCCCEEEEEECCCEEECCEEECCE----EEEEEEEECHHHHHHHHHHHHHH-HHHCCCCEEEEEHH--------------
T ss_conf 852014667445046506798890----78986542140799876579899-98539988998021--------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 89999976175099999997301578047888878738869999999732006721588999999999998679814897
Q gi|255764509|r 81 MALTALQEITLKKAEIARVIEQTSQFTRFLQLHSQIAGNLLFLRLEFATGDASGHNMVTKAADAVMDWILSQWSYLHYGS 160 (351)
Q Consensus 81 ~a~~~~~~i~~~~~~i~~~a~~~sr~ggl~~i~~~~~g~~v~l~~~~dt~DAMGaNmvnt~~E~v~~~i~~~~~~~~~~~ 160 (351)
T Consensus 126 -------------------------------------------------------------------------------- 125 (292)
T d1dqaa4 126 -------------------------------------------------------------------------------- 125 (292)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred ECCCCCHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHH
Q ss_conf 34774312333554310377207999987569999757389999999887866565542200220216216677888887
Q gi|255764509|r 161 VSGNICSDKKATAINGIMGRGKNFVAEITINRAICQKYLRTSPEKIILLNTQKNLIGTFLAGGIRSANAHFANMLLAYYL 240 (351)
Q Consensus 161 ilsN~~tdkk~s~~n~~~~rG~~V~Ae~~i~~~~~~~~l~~~~e~~~~~~~~~~~~a~~~~~~a~t~NkgimNgI~Av~l 240 (351)
+.+.++..+|.++++++++++++++.+.+..++.++++.++.+.+||||+||||+||||
T Consensus 126 ---------------------~~~~a~~~~~~~vv~~~Lk~~~e~l~~~~~~~nl~gsa~ag~~~g~N~~i~NgI~Av~l 184 (292)
T d1dqaa4 126 ---------------------KSVVCEAVIPAKVVREVLKTTTEAMIEVNINKNLVGSAMAGSIGGYNAHAANIVTAIYI 184 (292)
T ss_dssp ---------------------EEEEEEEEECHHHHHHTTSSCHHHHHHHHHHHHTHHHHHTTCSSEESSSHHHHHHHHHH
T ss_pred ---------------------HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf ---------------------11122115708999999807999999998778899999974111210567657788776
Q ss_pred HCCCCHHHHHHHCCCEEEEE---EECCEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHCCCCCCC--CCCCHHHHHHHH
Q ss_conf 62763788886403202568---7289089999805646773066446888999998608687788--776988999999
Q gi|255764509|r 241 ATGQDAANIVEGSQGLTYAK---LHDDSLYFSCTIPNLILGCVGNGKNIPAIKNNLTALGCIEERK--TGDNARRLAAIC 315 (351)
Q Consensus 241 ATGnD~a~v~a~~~a~t~~~---~~~~~L~g~i~lPsl~vGtVGG~t~lp~~~~~l~ilg~~~~~~--~~~~A~~La~ii 315 (351)
|||||||++++++|+|+..+ .++++|++++|||||+||||||+|+||+||+||+||||+++++ +.+||++||+||
T Consensus 185 ATGqD~a~v~~ss~a~t~~~~~~~~~~~L~~s~tlPsl~VGtVGGgT~l~~q~~~L~iLgv~g~~~~~p~~nA~~LA~Ii 264 (292)
T d1dqaa4 185 ACGQDAAQNVGSSNCITLMEASGPTNEDLYISCTMPSIEIGTVGGGTNLLPQQACLQMLGVQGACKDNPGENARQLARIV 264 (292)
T ss_dssp HTTCCGGGHHHHTCEEEEEEEETTTTCEEEEEEEEEEECCCSBSGGGGSHHHHHHHHHHTCCSCCSSSTTHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHCCEEEEEEEECCCCCEEEEEEECCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
T ss_conf 63542999987404137888997189977999982240566415766580599999984877767888760799999999
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHC
Q ss_conf 99998889999998807886899998726
Q gi|255764509|r 316 AATVLCGELSLLAAQTNPGELMEAHLRLE 344 (351)
Q Consensus 316 AavgLAqnlaal~Al~t~G~iq~gHmkl~ 344 (351)
||+|||||||+|+||++.| ||+|||||+
T Consensus 265 aa~~LA~els~l~ALat~~-i~~~HMk~n 292 (292)
T d1dqaa4 265 CGTVMAGELSLMAALAAGH-LVKSHMIHN 292 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTC-HHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHCCC-HHHHHHCCC
T ss_conf 9999999999999987471-788761129
No 2
>d1r31a2 d.179.1.1 (A:3-110,A:221-378) Substrate-binding domain of HMG-CoA reductase {Pseudomonas mevalonii [TaxId: 32044]}
Probab=100.00 E-value=0 Score=421.11 Aligned_cols=207 Identities=21% Similarity=0.251 Sum_probs=182.5
Q ss_pred CCCCCEEEEEEEEEEECCEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCHH
Q ss_conf 97641037861127603756765136774788653034538999989999999559988999967922412599858977
Q gi|255764509|r 1 MHMKKVSSISMPMRWIGPMKITGNVIQDKVKVPLATYEYPLWHSVKRGAHISMLCPDGIRATLIDERMTRSIFFETENAE 80 (351)
Q Consensus 1 m~en~IG~~~lPlGia~~l~InG~~a~~~y~VPMATeE~SvVAAas~gak~~~~~sGG~~t~~~~~~m~r~~~f~~~~~~ 80 (351)
||||+||+++||+|||+||+|||+ +|+|||||||||||||+|||||+ ++.+|||++.+.++.|+|+|++.+.+
T Consensus 48 miEN~IG~~~lP~Gva~~~~Ing~----~y~vPmAteE~svVAa~s~gak~-~~~~GG~~~~~~~~~~~ra~~~~~~~-- 120 (266)
T d1r31a2 48 MIENVIGTFELPYAVASNFQINGR----DVLVPLVVEEPSIVAAASYMAKL-ARANGGFTTSSSAPRLARAQVRITPQ-- 120 (266)
T ss_dssp HSSSEEEEEEEEEEEECSCEETTE----ECCEEEECSCTTHHHHHHHHHHH-HHTTTCBEEEECCCSEEEEEEEECHH--
T ss_pred HHCCCCCEEEEEEEEEEEEEECCE----EEECCCCCCCHHHHHHHHHHHHH-HHHCCCCEEEEEECCCCCEEEEEEHH--
T ss_conf 202023006763223567998680----88744102421678887677899-98649953776400012417998456--
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 89999976175099999997301578047888878738869999999732006721588999999999998679814897
Q gi|255764509|r 81 MALTALQEITLKKAEIARVIEQTSQFTRFLQLHSQIAGNLLFLRLEFATGDASGHNMVTKAADAVMDWILSQWSYLHYGS 160 (351)
Q Consensus 81 ~a~~~~~~i~~~~~~i~~~a~~~sr~ggl~~i~~~~~g~~v~l~~~~dt~DAMGaNmvnt~~E~v~~~i~~~~~~~~~~~ 160 (351)
+ ++++|.+|.
T Consensus 121 ~---------------------------------------------l~~~~~~g~------------------------- 130 (266)
T d1r31a2 121 Q---------------------------------------------LETAEFSGE------------------------- 130 (266)
T ss_dssp H---------------------------------------------HCCSSSCHH-------------------------
T ss_pred H---------------------------------------------CCCCCCCHH-------------------------
T ss_conf 4---------------------------------------------255553589-------------------------
Q ss_pred ECCCCCHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHH
Q ss_conf 34774312333554310377207999987569999757389999999887866565542200220216216677888887
Q gi|255764509|r 161 VSGNICSDKKATAINGIMGRGKNFVAEITINRAICQKYLRTSPEKIILLNTQKNLIGTFLAGGIRSANAHFANMLLAYYL 240 (351)
Q Consensus 161 ilsN~~tdkk~s~~n~~~~rG~~V~Ae~~i~~~~~~~~l~~~~e~~~~~~~~~~~~a~~~~~~a~t~NkgimNgI~Av~l 240 (351)
++++.+...+.++..|+||++||||++||||+++++
T Consensus 131 --------------------------------------------~va~~i~~a~~~a~~d~~ra~thnkgimNgi~av~~ 166 (266)
T d1r31a2 131 --------------------------------------------AVIEGILDAYAFAAVDPYRAATHNKGIMNGIDPLIV 166 (266)
T ss_dssp --------------------------------------------HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------HHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHH
T ss_conf --------------------------------------------999999999999865879886664654411769999
Q ss_pred HCCCCHHHHHHHCCCE----------EEEEEE-CCEEEEEEEECCEEEEEECCCCCC-HHHHHHHHHHCCCCCCCCCCCH
Q ss_conf 6276378888640320----------256872-890899998056467730664468-8899999860868778877698
Q gi|255764509|r 241 ATGQDAANIVEGSQGL----------TYAKLH-DDSLYFSCTIPNLILGCVGNGKNI-PAIKNNLTALGCIEERKTGDNA 308 (351)
Q Consensus 241 ATGnD~a~v~a~~~a~----------t~~~~~-~~~L~g~i~lPsl~vGtVGG~t~l-p~~~~~l~ilg~~~~~~~~~~A 308 (351)
|||||||++|+++|+| ++|+.. ++.|++++++| |+||||||+++. |.++.||+|||+ ++|
T Consensus 167 atgnd~raiea~aha~a~~~g~y~~l~~w~~~~~~~l~~~~~ip-l~vgtVgg~~~~~p~a~~~l~il~~-------~~a 238 (266)
T d1r31a2 167 ATGNDWRAVEAGAHAYACRSGHYGSLTTWEKDNNGHLVGTLEMP-MPVGLVGGATKTHPLAQLSLRILGV-------KTA 238 (266)
T ss_dssp HTTCCHHHHHHHHHHHHTTTSSCCCSEEEEECTTSCEEEEEEEE-CCCCSBSTHHHHCHHHHHHHHHHTC-------SSH
T ss_pred HHCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEECC-EEEHHHCCCEECCHHHHHHHHHHCC-------CCH
T ss_conf 85698353677763320148997245858987998589999634-4301114520228889999988678-------179
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 89999999999888999999880788689
Q gi|255764509|r 309 RRLAAICAATVLCGELSLLAAQTNPGELM 337 (351)
Q Consensus 309 ~~La~iiAavgLAqnlaal~Al~t~G~iq 337 (351)
++||+||+|+||||||||||||+|+| ||
T Consensus 239 ~~La~iiaavgLAqnlaal~aL~t~g-iq 266 (266)
T d1r31a2 239 QALAEIAVAVGLAQNLGAMRALATEG-IQ 266 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTC-CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCC-CC
T ss_conf 99988999999998999999985258-89
No 3
>d1dqaa1 d.58.20.1 (A:587-703) NAD-binding domain of HMG-CoA reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.3e-34 Score=233.34 Aligned_cols=115 Identities=34% Similarity=0.486 Sum_probs=112.5
Q ss_pred CEEEEEEEEECCHHHHHHHHHHH--HHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHH
Q ss_conf 22412599858977899999761--7509999999730157804788887873886999999973200672158899999
Q gi|255764509|r 67 RMTRSIFFETENAEMALTALQEI--TLKKAEIARVIEQTSQFTRFLQLHSQIAGNLLFLRLEFATGDASGHNMVTKAADA 144 (351)
Q Consensus 67 ~m~r~~~f~~~~~~~a~~~~~~i--~~~~~~i~~~a~~~sr~ggl~~i~~~~~g~~v~l~~~~dt~DAMGaNmvnt~~E~ 144 (351)
+|+|+|+|.|++..++.+|..|+ ++++++|+++++++|||++|++|++++.|++|+|+|.|+||||||+|||++++|+
T Consensus 1 GMtRaP~f~f~~~~~A~~f~~Wl~~~e~~~~ik~~~esTSr~~rL~~i~~~i~G~~v~lrF~~~TGDA~G~NMvT~at~~ 80 (117)
T d1dqaa1 1 GMTRGPVVRLPRACDSAEVKAWLETSEGFAVIKEAFDSTSRFARLQKLHTSIAGRNLYIRFQSRSGDAMGMNMISKGTEK 80 (117)
T ss_dssp EEEECCEEECSSHHHHHHHHHHHTSHHHHHHHHHHHHTTCSSEEEEEEEEEEETTEEEEEEEEEETTBCCHHHHHHHHHH
T ss_pred CCCCCCEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEECCCEEEEECCEEEEEEEEECCCHHHCHHHHHHHHH
T ss_conf 99775179949999999999998371339999999971596377322378988788999999872621106578999999
Q ss_pred HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCC
Q ss_conf 9999998679814897347743123335543103772
Q gi|255764509|r 145 VMDWILSQWSYLHYGSVSGNICSDKKATAINGIMGRG 181 (351)
Q Consensus 145 v~~~i~~~~~~~~~~~ilsN~~tdkk~s~~n~~~~rG 181 (351)
+|+||++++|+..+++|++|||+|||+|++|+++|||
T Consensus 81 a~~~i~~~~p~~~~~~lsGN~ctDKK~sa~N~i~GRG 117 (117)
T d1dqaa1 81 ALSKLHEYFPEMQILAVSGNYCTDKKPAAINWIEGRG 117 (117)
T ss_dssp HHHHHHHHCTTCEEEESCCSSSCCSSCCHHHHHHCCE
T ss_pred HHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCCC
T ss_conf 9999998599973999855466653366513546789
No 4
>d1r31a1 d.58.20.1 (A:111-220) NAD-binding domain of HMG-CoA reductase {Pseudomonas mevalonii [TaxId: 32044]}
Probab=99.92 E-value=7.4e-25 Score=172.26 Aligned_cols=99 Identities=18% Similarity=0.117 Sum_probs=89.1
Q ss_pred CEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCEEEEEEEEEEEC-----CEEEEEEEEEECCCCCCH
Q ss_conf 224125998589778999997617509999999730-----1578047888878738-----869999999732006721
Q gi|255764509|r 67 RMTRSIFFETENAEMALTALQEITLKKAEIARVIEQ-----TSQFTRFLQLHSQIAG-----NLLFLRLEFATGDASGHN 136 (351)
Q Consensus 67 ~m~r~~~f~~~~~~~a~~~~~~i~~~~~~i~~~a~~-----~sr~ggl~~i~~~~~g-----~~v~l~~~~dt~DAMGaN 136 (351)
.|.+|+||. +..|+..+..++.+++++|++.+|+ .+||||++|++.+... +|+++++.|||+||||||
T Consensus 1 lMiGQIql~--~v~d~~~a~~~i~~~k~~l~~~an~~~p~m~kRGGG~~di~~r~~~~~~~~~~~~v~l~vdt~DAMGAN 78 (110)
T d1r31a1 1 LMHAQVQIV--GIQDPLNARLSLLRRKDEIIELANRKDQLLNSLGGGCRDIEVHTFADTPRGPMLVAHLIVDVRDAMGAN 78 (110)
T ss_dssp EEEEEEEEE--SCSCHHHHHHHHHHTHHHHHHHHHTTCHHHHHTTCEEEEEEEEEECCCTTCCEEEEEEEEECTTBCCHH
T ss_pred CEEEEEEEE--ECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEEEHHHHHHHH
T ss_conf 935879995--279999999999997999999987528778864998268999974577768879999999837754137
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEEECCCCCH
Q ss_conf 5889999999999986798148973477431
Q gi|255764509|r 137 MVTKAADAVMDWILSQWSYLHYGSVSGNICS 167 (351)
Q Consensus 137 mvnt~~E~v~~~i~~~~~~~~~~~ilsN~~t 167 (351)
+||||+|+++++|+++++++++++|||||+.
T Consensus 79 ~iNt~lE~ia~~le~~~~~~v~m~ILSNyad 109 (110)
T d1r31a1 79 TVNTMAEAVAPLMEAITGGQVRLRILSNLAD 109 (110)
T ss_dssp HHHHHHHHHHHHHHHHHCSEEEEEEECSCCT
T ss_pred HHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_conf 8999999999999998499599998405779
No 5
>d1r31a2 d.179.1.1 (A:3-110,A:221-378) Substrate-binding domain of HMG-CoA reductase {Pseudomonas mevalonii [TaxId: 32044]}
Probab=90.67 E-value=0.0014 Score=38.84 Aligned_cols=86 Identities=13% Similarity=0.004 Sum_probs=50.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEEECHHH--HHHHHCCCHHHHHH
Q ss_conf 0067215889999999999986798148973477431233355431037720799998756999--97573899999998
Q gi|255764509|r 131 DASGHNMVTKAADAVMDWILSQWSYLHYGSVSGNICSDKKATAINGIMGRGKNFVAEITINRAI--CQKYLRTSPEKIIL 208 (351)
Q Consensus 131 DAMGaNmvnt~~E~v~~~i~~~~~~~~~~~ilsN~~tdkk~s~~n~~~~rG~~V~Ae~~i~~~~--~~~~l~~~~e~~~~ 208 (351)
.++..++...+.|+.++.... +++++.+..+|..+++..+.++..+|..+ +...+++.|+..+.
T Consensus 164 v~~atgnd~raiea~aha~a~--------------~~g~y~~l~~w~~~~~~~l~~~~~ipl~vgtVgg~~~~~p~a~~~ 229 (266)
T d1r31a2 164 LIVATGNDWRAVEAGAHAYAC--------------RSGHYGSLTTWEKDNNGHLVGTLEMPMPVGLVGGATKTHPLAQLS 229 (266)
T ss_dssp HHHHTTCCHHHHHHHHHHHHT--------------TTSSCCCSEEEEECTTSCEEEEEEEECCCCSBSTHHHHCHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHC--------------CCCCCCCCCEEEECCCCCEEEEEECCEEEHHHCCCEECCHHHHHH
T ss_conf 999856983536777633201--------------489972458589879985899996344301114520228889999
Q ss_pred HHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHH
Q ss_conf 878665655422002202162166778888876
Q gi|255764509|r 209 LNTQKNLIGTFLAGGIRSANAHFANMLLAYYLA 241 (351)
Q Consensus 209 ~~~~~~~~a~~~~~~a~t~NkgimNgI~Av~lA 241 (351)
+....+.-+.. -++.|.|+.||
T Consensus 230 l~il~~~~a~~-----------La~iiaavgLA 251 (266)
T d1r31a2 230 LRILGVKTAQA-----------LAEIAVAVGLA 251 (266)
T ss_dssp HHHHTCSSHHH-----------HHHHHHHHHHH
T ss_pred HHHHCCCCHHH-----------HHHHHHHHHHH
T ss_conf 98867817999-----------98899999999
No 6
>d3bypa1 d.52.9.1 (A:6-87) Putative Zinc transporter CzrB {Thermus thermophilus [TaxId: 274]}
Probab=82.10 E-value=1.3 Score=20.30 Aligned_cols=66 Identities=12% Similarity=0.154 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHCC--CCEEEEEEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 50999999973015--7804788887873886999999973200672158899999999999867981
Q gi|255764509|r 91 LKKAEIARVIEQTS--QFTRFLQLHSQIAGNLLFLRLEFATGDASGHNMVTKAADAVMDWILSQWSYL 156 (351)
Q Consensus 91 ~~~~~i~~~a~~~s--r~ggl~~i~~~~~g~~v~l~~~~dt~DAMGaNmvnt~~E~v~~~i~~~~~~~ 156 (351)
+..++|.+++.+.. +.-++.++.++..|+++++++.+..-.-|-.-=.-.+++.+-..|.+.++..
T Consensus 5 e~~~~I~~~i~~~~~~~vv~vh~lr~r~~G~~~~vd~hi~v~~~~sv~~aH~i~~~ve~~i~~~~~~~ 72 (82)
T d3bypa1 5 EEVERIRAFLQERIRGRALEVHDLKTRRAGPRSFLEFHLVVRGDTPVEEAHRLCDELERALAQAFPGL 72 (82)
T ss_dssp HHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEEECTTCBHHHHHHHHHHHHHHHHHHSTTE
T ss_pred HHHHHHHHHHHHCCCCCCEEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999589978030168875698898999999998989989999999999999999658997
No 7
>d2qfia1 d.52.9.1 (A:209-290) Ferrous-iron efflux pump FieF (YiiP) {Escherichia coli [TaxId: 562]}
Probab=34.56 E-value=1.9 Score=19.25 Aligned_cols=66 Identities=17% Similarity=0.200 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 509999999730157804788887873886999999973200672158899999999999867981
Q gi|255764509|r 91 LKKAEIARVIEQTSQFTRFLQLHSQIAGNLLFLRLEFATGDASGHNMVTKAADAVMDWILSQWSYL 156 (351)
Q Consensus 91 ~~~~~i~~~a~~~sr~ggl~~i~~~~~g~~v~l~~~~dt~DAMGaNmvnt~~E~v~~~i~~~~~~~ 156 (351)
+..++|.+++.....--++.++..+..|+.+++++.+.....|-.--....++.+-..|++.++..
T Consensus 5 e~~~~I~~~i~~~~gV~~vh~lr~r~~G~~~~vd~hi~v~~~~sv~~aH~I~~~ie~~l~~~~~~~ 70 (82)
T d2qfia1 5 EERQEIIDIVTSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGS 70 (82)
T ss_dssp THHHHHHHHHTTSSSCSCBCCCCCCTTSCCBCCBSCTTSTTTCSCGGGHHHHHHHHHHTTSSSCCS
T ss_pred HHHHHHHHHHHCCCCCEEEEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 999999999971999234548999996890999999998999999999999999999999768997
No 8
>d1m55a_ d.89.1.3 (A:) Replication protein Rep, nuclease domain {Adeno-associated virus, aav-5 [TaxId: 272636]}
Probab=20.03 E-value=20 Score=12.87 Aligned_cols=81 Identities=11% Similarity=0.050 Sum_probs=53.4
Q ss_pred EEEEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 78888787388699999997320067215889999999999986798148973477431233355431037720799998
Q gi|255764509|r 109 FLQLHSQIAGNLLFLRLEFATGDASGHNMVTKAADAVMDWILSQWSYLHYGSVSGNICSDKKATAINGIMGRGKNFVAEI 188 (351)
Q Consensus 109 l~~i~~~~~g~~v~l~~~~dt~DAMGaNmvnt~~E~v~~~i~~~~~~~~~~~ilsN~~tdkk~s~~n~~~~rG~~V~Ae~ 188 (351)
+.+++. -..+.++|+.+++..--++|+-+-..+..+..+...+++..-- .++++.-. +...+++.++..+.
T Consensus 78 F~QlE~--g~~~fHlHvli~~~~i~~r~~gr~l~~~~~~~~~~~~~g~~p~--~~~w~~~~-----k~kk~g~~ri~d~~ 148 (193)
T d1m55a_ 78 FVQFEK--GSEYFHLHTLVETSGISSMVLGRYVSQIRAQLVKVVFQGIEPQ--INDWVAIT-----KVKKGGANKVVDSG 148 (193)
T ss_dssp EEEEEE--CSSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHHTSTTCCCC--STTSEEEC-----BSSTTSCBCCEETT
T ss_pred EEEECC--CCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCC--CCCCEEEE-----EECCCCCCEECCHH
T ss_conf 888537--8885269999548997831099999999999999862667767--66633688-----74168874562187
Q ss_pred EECHHHHHHH
Q ss_conf 7569999757
Q gi|255764509|r 189 TINRAICQKY 198 (351)
Q Consensus 189 ~i~~~~~~~~ 198 (351)
.|+.-++.|+
T Consensus 149 fI~nYLlpK~ 158 (193)
T d1m55a_ 149 YIPAYLLPKV 158 (193)
T ss_dssp HHHHHTTTCC
T ss_pred HHHHHHCCCC
T ss_conf 8898745678
No 9
>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=15.54 E-value=25 Score=12.21 Aligned_cols=29 Identities=17% Similarity=0.110 Sum_probs=22.6
Q ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 9999986086877887769889999999999
Q gi|255764509|r 289 IKNNLTALGCIEERKTGDNARRLAAICAATV 319 (351)
Q Consensus 289 ~~~~l~ilg~~~~~~~~~~A~~La~iiAavg 319 (351)
-.+|++|.+-.+-|. -+..+|++|+-+.|
T Consensus 6 Lae~FRifDkNaDGy--iD~eEl~~ilr~tG 34 (34)
T d1ctda_ 6 LANAFRIFDKNADGY--IDIEELGEILRATG 34 (34)
T ss_dssp HHHHHHTTCCSSSSC--BCHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCCCCC--CCHHHHHHHHHHCC
T ss_conf 999999981477664--06999999987239
No 10
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Probab=10.62 E-value=35 Score=11.29 Aligned_cols=13 Identities=15% Similarity=0.015 Sum_probs=5.4
Q ss_pred HHCCCCEEEEEEC
Q ss_conf 9559988999967
Q gi|255764509|r 53 MLCPDGIRATLID 65 (351)
Q Consensus 53 ~~~sGG~~t~~~~ 65 (351)
..++.++...++.
T Consensus 24 ~~~~~~~~v~vfE 36 (335)
T d2gv8a1 24 LAEKAFDQVTLFE 36 (335)
T ss_dssp HTTTCCSEEEEEC
T ss_pred HHHCCCCCEEEEE
T ss_conf 9829899889997
Done!