HHsearch results for GI: 255764510 and protein with PDBid: 1wcw_A
>1wcw_A Uroporphyrinogen III synthase; congenital erythropoietic porphyria, structural genomics, riken structural genomics/proteomics initiative; 1.30A {Thermus thermophilus} PDB: 1wd7_A 1wcx_A
Probab=100.00 E-value=3.1e-39 Score=253.41 Aligned_cols=223 Identities=15% Similarity=0.066 Sum_probs=183.2
Q ss_pred CEEEEECCHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCC----CCCCCCCEEEEECHHHHHHHHHHHC--------
Q ss_conf 9389858968869999999987982999421000007852001----6447587999848467999886200--------
Q gi|255764510|r 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVFL----AMQQSYGAIAITSSESLSTLPANFC-------- 68 (232)
Q Consensus 1 M~ilitRp~~~a~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~----~~~~~~d~iiftS~~av~~~~~~~~-------- 68 (232)
|||++|.++ +++.+..+|+++|++++.+|++++++++..... .....|||+||||+|||++|+....
T Consensus 9 ~r~~~~~~r-~~e~~~~lle~~G~~pi~~P~i~i~~~p~~~~~~~~~~~~~~~D~vifTS~n~V~~~~~~l~~~g~~~~~ 87 (261)
T 1wcw_A 9 VRVAYAGLR-RKEAFKALAEKLGFTPLLFPVQATEKVPVPEYRDQVRALAQGVDLFLATTGVGVRDLLEAGKALGLDLEG 87 (261)
T ss_dssp CEEEECCST-THHHHHHHHHHTTCEEEECCCEEEEECCGGGGHHHHHHHHTCCSEEEECCHHHHHHHHHHHHHTTCCCHH
T ss_pred CEEEECCHH-HHHHHHHHHHHCCCEEEECCHHHEECCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCHHH
T ss_conf 289861323-2899999999779949980546626589214578999732799999997989999999999873940777
Q ss_pred --CCCCEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEEEE
Q ss_conf --136300041589999764101223544454567899986422012777538972156756201468984698256768
Q gi|255764510|r 69 --RHTPIFAIGEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVID 146 (232)
Q Consensus 69 --~~~~~~~vg~~t~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~vl~~~g~~~~~~l~~~L~~~g~~v~~~~ 146 (232)
.+.+++|+|++|++++.+.|+.....+.+.++. ++.. .. ...+.+++++++.++++|.+.|++.|+.|.+++
T Consensus 88 ~l~~~~i~aVG~~Ta~aL~~~G~~~~~~~~~~s~~---l~~~-l~--~~~~~~~~~~~~~~~~~L~~~L~~~G~~V~~v~ 161 (261)
T 1wcw_A 88 PLAKAFRLARGAKAARALKEAGLPPHAVGDGTSKS---LLPL-LP--QGRGVAALQLYGKPLPLLENALAERGYRVLPLM 161 (261)
T ss_dssp HHHHSEEEESSHHHHHHHHHTTCCCSEECSSSHHH---HGGG-SC--CCCEEEEEECCSSCCHHHHHHHHHTTEEEEEEC
T ss_pred HHCCCEEEEECHHHHHHHHHCCCCCEECCCCCHHH---HHHH-HC--CCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEE
T ss_conf 84398799999899999997799855479731589---9987-50--489589997289881789999997899899998
Q ss_pred EEEECCCCCCHHHHHHHH--CCCCEEEEECHHHHHHHHHHCCHHH-------CCEEEEECCHHHHHHHHHCCCCEEEECC
Q ss_conf 875046899988999862--3783899807899999997135440-------5803997188999999976996699879
Q gi|255764510|r 147 CYYSQDIAYPETTMKNLL--QNADAILFYARSSVLYFFSLPLPAK-------ISAAFLCLSNNIASAIPASYKNVVTVAC 217 (232)
Q Consensus 147 vY~~~~~~~~~~~~~~~~--~~~d~i~f~S~~~v~~~~~~~~~~~-------~~~~~~~ig~~tA~~~~~~g~~~~~va~ 217 (232)
+|++++.+.....+...+ +++|+|+|||++++++|++++.... ..+.++||||.|++++++.|++++++++
T Consensus 162 ~Y~t~~~~~~~~~l~~~l~~~~~D~V~ftS~s~v~~f~~~~~~~~~l~~~l~~~~~v~aIGp~Ta~al~~~G~~~~~~~~ 241 (261)
T 1wcw_A 162 PYRHLPDPEGILRLEEALLRGEVDALAFVAAIQVEFLFEGAKDPKALREALNTRVKALAVGRVTADALREWGVKPFYVDE 241 (261)
T ss_dssp SEEEEECHHHHHHHHHHHHHTCCSEEEECSHHHHHHHHHHCSCHHHHHHHHHHTSEEEEESHHHHHHHHHTTCCCSEEEC
T ss_pred EEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCEEECC
T ss_conf 99983686456899998744781199957999999999986542045787427978999899999999986998579759
Q ss_pred CCCHHHHHHHHHH
Q ss_conf 9998899999861
Q gi|255764510|r 218 FPKETSLLKLLPL 230 (232)
Q Consensus 218 ~p~~~~ll~al~~ 230 (232)
.|+.++|+++|++
T Consensus 242 ~~~~~~lv~al~~ 254 (261)
T 1wcw_A 242 TERLGSLLQGFKR 254 (261)
T ss_dssp SCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
T ss_conf 9998999999999