HHsearch results for GI: 255764510 and protein with PDBid: 3k9c_A
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, protein structure initiative; 2.14A {Rhodococcus jostii RHA1}
Probab=95.71 E-value=0.085 Score=28.77 Aligned_cols=177 Identities=10% Similarity=0.099 Sum_probs=91.1
Q ss_pred HHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHCCCCCC
Q ss_conf 99999998798299942100000785200164475879998484679998862001363000415899997641012235
Q gi|255764510|r 14 RTQEKIQKMGYIPVMMPLSYFIHDRESVFLAMQQSYGAIAITSSESLSTLPANFCRHTPIFAIGEASACLARQKGFTQIF 93 (232)
Q Consensus 14 ~~~~~L~~~G~~~i~~Pli~i~~~~~~~~~~~~~~~d~iiftS~~av~~~~~~~~~~~~~~~vg~~t~~~~~~~~~~~~~ 93 (232)
.+...+.+.|++++..+.-+-...........-...|++|+.+...-.-....+....|+.+++.... ......+.
T Consensus 32 ~i~~~a~~~g~~v~l~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~iPvV~~~~~~~----~~~~~~V~ 107 (289)
T 3k9c_A 32 QIYAAATRRGYDVMLSAVAPSRAEKVAVQALMRERCEAAILLGTRFDTDELGALADRVPALVVARASG----LPGVGAVR 107 (289)
T ss_dssp HHHHHHHHTTCEEEEEEEBTTBCHHHHHHHHTTTTEEEEEEETCCCCHHHHHHHHTTSCEEEESSCCS----STTSEEEE
T ss_pred HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCC----CCCCCEEE
T ss_conf 99999998599899993899889999999999729988999505699699999995799899960578----99888785
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCC------CCHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHC--
Q ss_conf 44454567899986422012777538972156756------2014689846982567688750468999889998623--
Q gi|255764510|r 94 HGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRN------FHFEDYLIEHKIPLRVIDCYYSQDIAYPETTMKNLLQ-- 165 (232)
Q Consensus 94 ~~~~~~~~~~~ll~~~~~~~~~~~~vl~~~g~~~~------~~l~~~L~~~g~~v~~~~vY~~~~~~~~~~~~~~~~~-- 165 (232)
. +.......+.+... ..+.+++.++.+.+.. .-+.+.+.+.|..+....++...........+..+++
T Consensus 108 ~---D~~~a~~~a~~~l~-~~G~~~i~~i~~~~~~~~~~r~~gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 183 (289)
T 3k9c_A 108 G---DDVAGITLAVDHLT-ELGHRNIAHIDGADAPGGADRRAGFLAAMDRHGLSASATVVTGGTTETEGAEGMHTLLEMP 183 (289)
T ss_dssp E---CHHHHHHHHHHHHH-HTTCCSEEEECCTTSTTHHHHHHHHHHHHHHTTCGGGEEEECCCSSHHHHHHHHHHHHTSS
T ss_pred C---CHHHHHHHHHHHHH-HHCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHC
T ss_conf 4---76999999999998-7188741442587663157788877789998199977221115565677999999999734
Q ss_pred -CCCEEEEECHHHHHHHHHHCCHHHC----CEEEEECC
Q ss_conf -7838998078999999971354405----80399718
Q gi|255764510|r 166 -NADAILFYARSSVLYFFSLPLPAKI----SAAFLCLS 198 (232)
Q Consensus 166 -~~d~i~f~S~~~v~~~~~~~~~~~~----~~~~~~ig 198 (232)
.+++++.++...+..+.+.+...+. ++.+++++
T Consensus 184 ~~~~ai~~~~d~~A~g~~~~l~~~g~~ip~dv~vi~~d 221 (289)
T 3k9c_A 184 TPPTAVVAFNDRCATGVLDLLVRSGRDVPADISVVGYD 221 (289)
T ss_dssp SCCSEEEESSHHHHHHHHHHHHHTTCCTTTTCEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 58660121458999999999998599999754420248