HHsearch results for GI: 255764510 and protein with PDBid: 3mw8_A
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=100.00 E-value=3.7e-42 Score=270.95 Aligned_cols=229 Identities=14% Similarity=0.114 Sum_probs=195.5
Q ss_pred CEEEEECCHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCCC-CCCCCCCCEEEEECHHHHHHHHHHH---CCCCCEECC
Q ss_conf 938985896886999999998798299942100000785200-1644758799984846799988620---013630004
Q gi|255764510|r 1 MYIVITRPIKKALRTQEKIQKMGYIPVMMPLSYFIHDRESVF-LAMQQSYGAIAITSSESLSTLPANF---CRHTPIFAI 76 (232)
Q Consensus 1 M~ilitRp~~~a~~~~~~L~~~G~~~i~~Pli~i~~~~~~~~-~~~~~~~d~iiftS~~av~~~~~~~---~~~~~~~~v 76 (232)
||||||||.+++.+++..|+++|++++++|+++++|.+.... +..+.+||||||||++||+++.... ..+.+++|+
T Consensus 2 ~~IlitRp~~~~~~l~~~L~~~G~~~~~~Pli~i~~~~~~~~~l~~l~~~d~iIftS~~av~~~~~~~~~~~~~~~~~av 81 (240)
T 3mw8_A 2 MKLLLTRPEGKNAAMASALDALAIPYLVEPLLSVEAAAVTQAQLDELSRADILIFISTSAVSFATPWLKDQWPKATYYAV 81 (240)
T ss_dssp CCEEECSCTTSCHHHHHHHHHHTCCEEECCSCEEEECCCCHHHHHHHTTCSEEEECSHHHHHHHHHHHTTCCCSSEEEES
T ss_pred CEEEEECCHHHHHHHHHHHHHCCCCEEEECCEEEEECCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 79999085788899999999889959994776667240309998520248999998889999999987763468859998
Q ss_pred CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEEEEEEEECCCCCC
Q ss_conf 15899997641012235444545678999864220127775389721567562014689846982567688750468999
Q gi|255764510|r 77 GEASACLARQKGFTQIFHGKDNSINLAKIIVEQKVLFTPQKPLIYLGGKPRNFHFEDYLIEHKIPLRVIDCYYSQDIAYP 156 (232)
Q Consensus 77 g~~t~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~vl~~~g~~~~~~l~~~L~~~g~~v~~~~vY~~~~~~~~ 156 (232)
|+.|++++.+.|+...............+ .........+.++++++|..+++.+.+.|+..|+.|+++++|++++....
T Consensus 82 G~~Ta~~l~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~il~~~~~~~~~~l~~~l~~~g~~v~~~~~Y~~~~~~~~ 160 (240)
T 3mw8_A 82 GDATADALALQGITAERSPADSQATEGLL-TLPSLEQVSGKQIVIVRGKGGREAMADGLRLRGANVSYLEVYQRACPPLD 160 (240)
T ss_dssp SHHHHHHHHHTTCCCEECC---CCGGGGG-GCGGGTCCTTCEEEEEEESSSCCHHHHHHHHTTCEEEEEEEEEEECCCCC
T ss_pred CHHHHHHHHHCCCCCCCCCCCCHHHHHHH-HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEEEECCCCC
T ss_conf 38999999985997643676304788875-04554125787589853776632578999867986999987555458756
Q ss_pred HHHHHHHH--CCCCEEEEECHHHHHHHHHHCCHHHC----CEEEEECCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 88999862--37838998078999999971354405----8039971889999999769966998799998899999861
Q gi|255764510|r 157 ETTMKNLL--QNADAILFYARSSVLYFFSLPLPAKI----SAAFLCLSNNIASAIPASYKNVVTVACFPKETSLLKLLPL 230 (232)
Q Consensus 157 ~~~~~~~~--~~~d~i~f~S~~~v~~~~~~~~~~~~----~~~~~~ig~~tA~~~~~~g~~~~~va~~p~~~~ll~al~~ 230 (232)
.......+ +.+|+|+|||++++++|++++..+.. +.+++|+|++||+++++.||++++++++|+.++|++||..
T Consensus 161 ~~~~~~~~~~~~~d~v~f~S~~~v~~~~~~~~~~~~~~~~~~~~~~ig~~~a~~~~~~G~~~v~va~~p~~~~l~~al~~ 240 (240)
T 3mw8_A 161 APASVSRWQSFGIDTIVVTSGEVLENLINLVPKDSFAWLRDCHIIVPSARVETQARKKGLRRVTNAGAANQAAVLDALGM 240 (240)
T ss_dssp HHHHHHHHHHHTCCEEECCSHHHHHHHHHHSCGGGHHHHHHSEEEESSHHHHHHHHHTTCCCEEECSSSSHHHHHHHHTC
T ss_pred HHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCEEECCCCCHHHHHHHHCC
T ss_conf 58999999828998999789999999999855531577619989998899999999759981688999898999998676